Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:56:15 (369400): wrapper (7.7.26015): starting
00:56:15 (369400): wrapper: running run_atlas (--nthreads 12)
[2026-02-06 00:56:15] Arguments: --nthreads 12
[2026-02-06 00:56:15] Threads: 12
[2026-02-06 00:56:15] Checking for CVMFS
[2026-02-06 00:56:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 00:56:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 00:56:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 00:56:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 00:56:16] 2.11.5.0 1657931 131754 215176 155934 3 234 33067824 45568001 18395 130560 0 1146568095 99.799 675421750 23160 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2026-02-06 00:56:16] CVMFS is ok
[2026-02-06 00:56:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 00:56:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 00:56:16] Further information can be found at the LHC@home message board.
[2026-02-06 00:56:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 00:56:16] Checking for apptainer binary...
[2026-02-06 00:56:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 00:56:16] Running /usr/bin/apptainer --version
[2026-02-06 00:56:16] apptainer version 1.4.1-1.el9
[2026-02-06 00:56:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 00:56:16] wns0039.triumf.lcg
[2026-02-06 00:56:16] apptainer works
[2026-02-06 00:56:16] Set ATHENA_PROC_NUMBER=12
[2026-02-06 00:56:16] Set ATHENA_CORE_NUMBER=12
[2026-02-06 00:56:16] Starting ATLAS job with PandaID=6996407829
[2026-02-06 00:56:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 01:01:02]  *** The last 200 lines of the pilot log: ***
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | WARNING  | wrong length of table data, x=[1770368258.0], y=[1359.0] (must be same and length>=4)
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | could have reported an average CPU frequency of 2709 MHz (4 samples)
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | ..............................
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . Timing measurements:
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . get job = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . initial setup = 15 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . payload setup = 18 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . stage-in = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . payload execution = 31 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . stage-out = 1 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . log creation = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | ..............................
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 01:01:02] 2026-02-06 09:00:03,996 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996407829/pilotlog.txt
[2026-02-06 01:01:02] 2026-02-06 09:00:04,126 | INFO     | time since job start (188s) is within the limit (349056.0s)
[2026-02-06 01:01:02] 2026-02-06 09:00:04,162 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-06 01:01:02] - Log from pilotlog.txt -
[2026-02-06 01:01:02] 2026-02-06 09:00:03,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 01:01:02] 2026-02-06 09:00:03,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | WARNING  | found no stored workdir sizes
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | WARNING  | wrong length of table data, x=[1770368258.0], y=[1359.0] (must be same and length>=4)
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | could have reported an average CPU frequency of 2709 MHz (4 samples)
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | ..............................
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . Timing measurements:
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . get job = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . initial setup = 15 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . payload setup = 18 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . stage-in = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . payload execution = 31 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . stage-out = 1 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . log creation = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | ..............................
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 01:01:02] 2026-02-06 09:00:03,996 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996407829/pilotlog.txt
[2026-02-06 01:01:02] 2026-02-06 09:00:04,126 | INFO     | time since job start (188s) is within the limit (349056.0s)
[2026-02-06 01:01:02] 2026-02-06 09:00:04,162 | WARNING  | 
[2026-02-06 01:01:02] [begin log extracts]
[2026-02-06 01:01:02] - Log from pilotlog.txt -
[2026-02-06 01:01:02] 2026-02-06 09:00:03,993 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 01:01:02] 2026-02-06 09:00:03,993 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | WARNING  | found no stored workdir sizes
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | INFO     | will not add max space = 0 B to job metrics
[2026-02-06 01:01:02] 2026-02-06 09:00:03,994 | WARNING  | wrong length of table data, x=[1770368258.0], y=[1359.0] (must be same and length>=4)
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | could have reported an average CPU frequency of 2709 MHz (4 samples)
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | ..............................
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . Timing measurements:
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . get job = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . initial setup = 15 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . payload setup = 18 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . stage-in = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . payload execution = 31 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . stage-out = 1 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | . log creation = 0 s
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | ..............................
[2026-02-06 01:01:02] 2026-02-06 09:00:03,995 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-06 01:01:02] 2026-02-06 09:00:03,996 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6996407829/pilotlog.txt
[2026-02-06 01:01:02] 2026-02-06 09:00:04,126 | INFO     | time since job start (188s) is within the limit (349056.0s)
[2026-02-06 01:01:02] [end log extracts]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,163 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-06 01:01:02] 2026-02-06 09:00:04,164 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | 
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | job summary report
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | --------------------------------------------------
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | PanDA job id: 6996407829
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | task id: 48431113
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-06 00:57:53,098 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | pilot state: failed 
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | transexitcode: 65
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | exeerrorcode: 65
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | exitcode: 65
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-06 01:01:02] 2026-02-06 09:00:04,583 | INFO     | cpuconsumptiontime: 13 s
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | nevents: 0
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | neventsw: 0
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | pid: 377772
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | pgrp: 377772
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | corecount: 12
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | event service: False
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | sizes: {0: 2283114, 11: 2283114, 53: 2306307, 54: 2306283, 56: 2310603, 58: 2310631, 177: 2310925}
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | --------------------------------------------------
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | 
[2026-02-06 01:01:02] 2026-02-06 09:00:04,584 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-06 01:01:02] 2026-02-06 09:00:04,706 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,706 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,706 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,706 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,706 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,711 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 01:01:02] 2026-02-06 09:00:04,712 | INFO     | job 6996407829 has completed (purged errors)
[2026-02-06 01:01:02] 2026-02-06 09:00:04,716 | INFO     | overall cleanup function is called
[2026-02-06 01:01:02] 2026-02-06 09:00:05,723 | INFO     | --- collectZombieJob: --- 10, [377772]
[2026-02-06 01:01:02] 2026-02-06 09:00:05,723 | INFO     | zombie collector waiting for pid 377772
[2026-02-06 01:01:02] 2026-02-06 09:00:05,723 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 01:01:02] 2026-02-06 09:00:05,723 | INFO     | collected zombie processes
[2026-02-06 01:01:02] 2026-02-06 09:00:05,723 | INFO     | will attempt to kill all subprocesses of pid=377772
[2026-02-06 01:01:02] 2026-02-06 09:00:06,962 | INFO     | process IDs to be killed: [377772] (in reverse order)
[2026-02-06 01:01:02] 2026-02-06 09:00:07,396 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 01:01:02] 2026-02-06 09:00:07,397 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 01:01:02] 2026-02-06 09:00:07,428 | INFO     | did not find any defunct processes belonging to 377772
[2026-02-06 01:01:02] 2026-02-06 09:00:07,461 | INFO     | did not find any defunct processes belonging to 377772
[2026-02-06 01:01:02] 2026-02-06 09:00:07,461 | INFO     | ready for new job
[2026-02-06 01:01:02] 2026-02-06 09:00:07,461 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 01:01:02] 2026-02-06 09:00:07,462 | INFO     | **************************************
[2026-02-06 01:01:02] 2026-02-06 09:00:07,462 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 01:01:02] 2026-02-06 09:00:07,462 | INFO     | **************************************
[2026-02-06 01:01:02] 2026-02-06 09:00:07,462 | INFO     | 
[2026-02-06 01:01:02] 2026-02-06 09:00:07,476 | INFO     | architecture information:
[2026-02-06 01:01:02] 2026-02-06 09:00:07,500 | INFO     | executing command: cat /etc/os-release
[2026-02-06 01:01:02] 2026-02-06 09:00:07,540 | INFO     | cat /etc/os-release:
[2026-02-06 01:01:02] NAME="CentOS Linux"
[2026-02-06 01:01:02] VERSION="7 (Core)"
[2026-02-06 01:01:02] ID="centos"
[2026-02-06 01:01:02] ID_LIKE="rhel fedora"
[2026-02-06 01:01:02] VERSION_ID="7"
[2026-02-06 01:01:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 01:01:02] ANSI_COLOR="0;31"
[2026-02-06 01:01:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 01:01:02] HOME_URL="https://www.centos.org/"
[2026-02-06 01:01:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 01:01:02] 
[2026-02-06 01:01:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 01:01:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 01:01:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 01:01:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 01:01:02] 
[2026-02-06 01:01:02] 2026-02-06 09:00:07,540 | INFO     | **************************************
[2026-02-06 01:01:02] 2026-02-06 09:00:08,044 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-06 01:01:02] 2026-02-06 09:00:08,149 | INFO     | sufficient remaining disk space (2113641906176 B)
[2026-02-06 01:01:02] 2026-02-06 09:00:08,149 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 01:01:02] 2026-02-06 09:00:08,150 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 01:01:02] 2026-02-06 09:00:08,150 | INFO     | update_server=False
[2026-02-06 01:01:02] 2026-02-06 09:00:08,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 01:01:02] 2026-02-06 09:00:08,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 01:01:02] 2026-02-06 09:00:08,623 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-06 01:01:02] 2026-02-06 09:00:08,623 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-06 01:01:02] 2026-02-06 09:00:08,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 01:01:02] 2026-02-06 09:00:08,623 | INFO     | will abort loop
[2026-02-06 01:01:02] 2026-02-06 09:00:09,140 | INFO     | all data control threads have been joined
[2026-02-06 01:01:02] 2026-02-06 09:00:09,156 | INFO     | [job] retrieve thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:09,164 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:09,193 | INFO     | all payload control threads have been joined
[2026-02-06 01:01:02] 2026-02-06 09:00:09,395 | INFO     | all job control threads have been joined
[2026-02-06 01:01:02] 2026-02-06 09:00:09,600 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:09,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 01:01:02] 2026-02-06 09:00:09,629 | INFO     | [job] validate thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:09,629 | INFO     | [job] job monitor thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:09,648 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:09,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 01:01:02] 2026-02-06 09:00:10,073 | INFO     | [data] copytool_in thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:10,145 | INFO     | [data] control thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:10,157 | INFO     | [data] copytool_out thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:10,199 | INFO     | [payload] control thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:10,360 | INFO     | [payload] validate_post thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:10,374 | INFO     | [payload] failed_post thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:10,401 | INFO     | [job] control thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:10,418 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:10,608 | INFO     | [job] queue monitor thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:13,843 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 01:01:02] 2026-02-06 09:00:37,917 | INFO     | PID=373138 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 01:01:02] 2026-02-06 09:00:37,917 | INFO     | .. there are 35 such processes running
[2026-02-06 01:01:02] 2026-02-06 09:00:37,918 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 01:01:02] 2026-02-06 09:00:37,918 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 01:01:02] 2026-02-06 09:00:37,918 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 01:01:02] 2026-02-06 09:00:56,258 | INFO     | [monitor] cgroup control has ended
[2026-02-06 01:01:02] 2026-02-06 09:00:56,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140444822193984)>', '<ExcThread(monitor, started 140443534743296)>']
[2026-02-06 01:01:02] 2026-02-06 09:00:57,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 01:01:02] 2026-02-06 09:00:57,046 | INFO     | [monitor] control thread has ended
[2026-02-06 01:01:02] 2026-02-06 09:01:01,676 | INFO     | all workflow threads have been joined
[2026-02-06 01:01:02] 2026-02-06 09:01:01,676 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 01:01:02] 2026-02-06 09:01:01,676 | INFO     | traces error code: 0
[2026-02-06 01:01:02] 2026-02-06 09:01:01,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 01:01:02] 2026-02-06 09:01:01,797 [wrapper] ==== pilot stdout END ====
[2026-02-06 01:01:02] 2026-02-06 09:01:01,800 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 01:01:02] 2026-02-06 09:01:01,802 [wrapper] pilotpid: 373138
[2026-02-06 01:01:02] 2026-02-06 09:01:01,803 [wrapper] Pilot exit status: 0
[2026-02-06 01:01:02] 2026-02-06 09:01:01,814 [wrapper] pandaids: 6996407829
[2026-02-06 01:01:02] 2026-02-06 09:01:01,860 [wrapper] cleanup supervisor_pilot  373144 373139
[2026-02-06 01:01:02] 2026-02-06 09:01:01,869 [wrapper] Test setup, not cleaning
[2026-02-06 01:01:02] 2026-02-06 09:01:01,871 [wrapper] apfmon messages muted
[2026-02-06 01:01:02] 2026-02-06 09:01:01,873 [wrapper] ==== wrapper stdout END ====
[2026-02-06 01:01:02] 2026-02-06 09:01:01,878 [wrapper] ==== wrapper stderr END ====
[2026-02-06 01:01:02]  *** Error codes and diagnostics ***
[2026-02-06 01:01:02]     "exeErrorCode": 65,
[2026-02-06 01:01:02]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 01:01:02]     "pilotErrorCode": 1305,
[2026-02-06 01:01:02]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-06 01:01:02]  *** Listing of results directory ***
[2026-02-06 01:01:02] total 640864
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc      5111 Feb  5 21:55 queuedata.json
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc    584627 Feb  5 21:55 pilot3.tar.gz
[2026-02-06 01:01:02] -rwx------. 1 boinc boinc     36322 Feb  5 21:55 runpilot2-wrapper.sh
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc       100 Feb  6 00:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 01:01:02] -rwxr-xr-x. 1 boinc boinc      7986 Feb  6 00:56 run_atlas
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc       105 Feb  6 00:56 job.xml
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc      6594 Feb  6 00:56 init_data.xml
[2026-02-06 01:01:02] -rw-r--r--. 2 boinc boinc 652101777 Feb  6 00:56 EVNT.48431111._000041.pool.root.1
[2026-02-06 01:01:02] -rw-r--r--. 2 boinc boinc     15845 Feb  6 00:56 start_atlas.sh
[2026-02-06 01:01:02] drwxrwx--x. 2 boinc boinc      4096 Feb  6 00:56 shared
[2026-02-06 01:01:02] -rw-r--r--. 2 boinc boinc    597949 Feb  6 00:56 input.tar.gz
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc         0 Feb  6 00:56 boinc_lockfile
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc      2544 Feb  6 00:56 pandaJob.out
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc   1007453 Feb  6 00:56 agis_schedconf.cvmfs.json
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc   1513144 Feb  6 00:56 agis_ddmendpoints.agis.ALL.json
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc       444 Feb  6 00:56 workernode_map.json
[2026-02-06 01:01:02] drwx------. 5 boinc boinc      4096 Feb  6 00:56 pilot3
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc       950 Feb  6 00:57 memory_monitor_summary.json
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc     20617 Feb  6 00:58 log.48431113._002036.job.log.tgz.1
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc        95 Feb  6 00:59 pilot_heartbeat.json
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc      7004 Feb  6 01:00 heartbeat.json
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc       524 Feb  6 01:00 boinc_task_state.xml
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc      8192 Feb  6 01:00 boinc_mmap_file
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc        22 Feb  6 01:00 wrapper_checkpoint.txt
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc      5004 Feb  6 01:01 pilotlog.txt
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc     83285 Feb  6 01:01 log.48431113._002036.job.log.1
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc       188 Feb  6 01:01 output.list
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc       620 Feb  6 01:01 runtime_log
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc    122880 Feb  6 01:01 result.tar.gz
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc       643 Feb  6 01:01 wjUMDmczT88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmg7XKDm8Lh9Km.diag
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc      8635 Feb  6 01:01 runtime_log.err
[2026-02-06 01:01:02] -rw-r--r--. 1 boinc boinc     21648 Feb  6 01:01 stderr.txt
[2026-02-06 01:01:02] No HITS result produced
[2026-02-06 01:01:02]  *** Contents of shared directory: ***
[2026-02-06 01:01:02] total 637544
[2026-02-06 01:01:02] -rw-r--r--. 2 boinc boinc 652101777 Feb  6 00:56 ATLAS.root_0
[2026-02-06 01:01:02] -rw-r--r--. 2 boinc boinc     15845 Feb  6 00:56 start_atlas.sh
[2026-02-06 01:01:02] -rw-r--r--. 2 boinc boinc    597949 Feb  6 00:56 input.tar.gz
[2026-02-06 01:01:02] -rw-------. 1 boinc boinc    122880 Feb  6 01:01 result.tar.gz
01:01:03 (369400): run_atlas exited; CPU time 19.787934
01:01:03 (369400): called boinc_finish(0)

</stderr_txt>
]]>

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