Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:24:08 (4135183): wrapper (7.7.26015): starting
18:24:08 (4135183): wrapper: running run_atlas (--nthreads 4)
[2026-02-07 18:24:08] Arguments: --nthreads 4
[2026-02-07 18:24:08] Threads: 4
[2026-02-07 18:24:08] Checking for CVMFS
[2026-02-07 18:24:08] No cvmfs_config command found, will try listing directly
[2026-02-07 18:24:08] CVMFS is ok
[2026-02-07 18:24:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-07 18:24:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-07 18:24:08] Further information can be found at the LHC@home message board.
[2026-02-07 18:24:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-07 18:24:08] Checking for apptainer binary...
[2026-02-07 18:24:08] which: no apptainer in ((null))
[2026-02-07 18:24:08] apptainer is not installed, using version from CVMFS
[2026-02-07 18:24:08] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-07 18:24:08] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-02-07 18:24:08] apptainer works
[2026-02-07 18:24:08] Set ATHENA_PROC_NUMBER=4
[2026-02-07 18:24:08] Set ATHENA_CORE_NUMBER=4
[2026-02-07 18:24:08] Starting ATLAS job with PandaID=7000907928
[2026-02-07 18:24:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 22:57:06]  *** The last 200 lines of the pilot log: ***
[2026-02-07 22:57:06] 2026-02-07 21:55:07,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-07 22:57:06] 2026-02-07 21:55:07,591 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 22:57:06] 2026-02-07 21:55:07,591 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 22:57:06] 2026-02-07 21:55:07,596 | INFO     | fitting pss+swap vs Time
[2026-02-07 22:57:06] 2026-02-07 21:55:07,597 | INFO     | sum of square deviations: 5836025702.5
[2026-02-07 22:57:06] 2026-02-07 21:55:07,599 | INFO     | sum of deviations: -52049893309.50001
[2026-02-07 22:57:06] 2026-02-07 21:55:07,600 | INFO     | mean x: 1770493170.5
[2026-02-07 22:57:06] 2026-02-07 21:55:07,600 | INFO     | mean y: 2383229.1090225563
[2026-02-07 22:57:06] 2026-02-07 21:55:07,600 | INFO     | intersect: 15792920373.29039
[2026-02-07 22:57:06] 2026-02-07 21:55:07,600 | INFO     | chi2: 1.6482282591733144
[2026-02-07 22:57:06] 2026-02-07 21:55:07,601 | INFO     | sum of square deviations: 5513070810.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,603 | INFO     | sum of deviations: -51018243406.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,603 | INFO     | mean x: 1770493018.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,603 | INFO     | mean y: 2383716.318007663
[2026-02-07 22:57:06] 2026-02-07 21:55:07,604 | INFO     | intersect: 16386617994.082989
[2026-02-07 22:57:06] 2026-02-07 21:55:07,604 | INFO     | chi2: 1.64412059810639
[2026-02-07 22:57:06] 2026-02-07 21:55:07,604 | INFO     | current chi2=1.64412059810639 (change=0.24921676012184343 %)
[2026-02-07 22:57:06] 2026-02-07 21:55:07,604 | INFO     | right removable region: 260
[2026-02-07 22:57:06] 2026-02-07 21:55:07,605 | INFO     | sum of square deviations: 5513070810.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,607 | INFO     | sum of deviations: -84198618054.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,607 | INFO     | mean x: 1770493323.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,607 | INFO     | mean y: 2398242.8735632184
[2026-02-07 22:57:06] 2026-02-07 21:55:07,608 | INFO     | intersect: 27042335912.463238
[2026-02-07 22:57:06] 2026-02-07 21:55:07,608 | INFO     | chi2: 0.3277680013204221
[2026-02-07 22:57:06] 2026-02-07 21:55:07,608 | INFO     | current chi2=0.3277680013204221 (change=80.11391932542054 %)
[2026-02-07 22:57:06] 2026-02-07 21:55:07,609 | INFO     | sum of square deviations: 5202255680.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,611 | INFO     | sum of deviations: -78371916659.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,611 | INFO     | mean x: 1770493475.5
[2026-02-07 22:57:06] 2026-02-07 21:55:07,611 | INFO     | mean y: 2395370.65625
[2026-02-07 22:57:06] 2026-02-07 21:55:07,611 | INFO     | intersect: 26674857402.97014
[2026-02-07 22:57:06] 2026-02-07 21:55:07,612 | INFO     | chi2: 0.32351513836701623
[2026-02-07 22:57:06] 2026-02-07 21:55:07,612 | INFO     | current chi2=0.32351513836701623 (change=1.2975223134269076 %)
[2026-02-07 22:57:06] 2026-02-07 21:55:07,612 | INFO     | left removable region: 20
[2026-02-07 22:57:06] 2026-02-07 21:55:07,613 | INFO     | sum of square deviations: 4286517580.0
[2026-02-07 22:57:06] 2026-02-07 21:55:07,615 | INFO     | sum of deviations: -59145679300.00002
[2026-02-07 22:57:06] 2026-02-07 21:55:07,615 | INFO     | mean x: 1770493597.5
[2026-02-07 22:57:06] 2026-02-07 21:55:07,615 | INFO     | mean y: 2386725.1666666665
[2026-02-07 22:57:06] 2026-02-07 21:55:07,615 | INFO     | intersect: 24431785314.13462
[2026-02-07 22:57:06] 2026-02-07 21:55:07,616 | INFO     | chi2: 0.2934961651481836
[2026-02-07 22:57:06] 2026-02-07 21:55:07,616 | INFO     | current memory leak: -13.80 B/s (using 240 data points, chi2=0.29)
[2026-02-07 22:57:06] 2026-02-07 21:55:07,617 | INFO     | could have reported an average CPU frequency of 2583 MHz (12 samples)
[2026-02-07 22:57:06] 2026-02-07 21:55:07,617 | INFO     | ..............................
[2026-02-07 22:57:06] 2026-02-07 21:55:07,617 | INFO     | . Timing measurements:
[2026-02-07 22:57:06] 2026-02-07 21:55:07,617 | INFO     | . get job = 0 s
[2026-02-07 22:57:06] 2026-02-07 21:55:07,617 | INFO     | . initial setup = 6 s
[2026-02-07 22:57:06] 2026-02-07 21:55:07,617 | INFO     | . payload setup = 5 s
[2026-02-07 22:57:06] 2026-02-07 21:55:07,617 | INFO     | . stage-in = 0 s
[2026-02-07 22:57:06] 2026-02-07 21:55:07,618 | INFO     | . payload execution = 16217 s
[2026-02-07 22:57:06] 2026-02-07 21:55:07,618 | INFO     | . stage-out = 1 s
[2026-02-07 22:57:06] 2026-02-07 21:55:07,618 | INFO     | . log creation = 0 s
[2026-02-07 22:57:06] 2026-02-07 21:55:07,618 | INFO     | ..............................
[2026-02-07 22:57:06] 2026-02-07 21:55:08,009 | INFO     | 
[2026-02-07 22:57:06] 2026-02-07 21:55:08,009 | INFO     | job summary report
[2026-02-07 22:57:06] 2026-02-07 21:55:08,009 | INFO     | --------------------------------------------------
[2026-02-07 22:57:06] 2026-02-07 21:55:08,010 | INFO     | PanDA job id: 7000907928
[2026-02-07 22:57:06] 2026-02-07 21:55:08,010 | INFO     | task id: 48317952
[2026-02-07 22:57:06] 2026-02-07 21:55:08,010 | INFO     | errors: (none)
[2026-02-07 22:57:06] 2026-02-07 21:55:08,010 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 22:57:06] 2026-02-07 21:55:08,010 | INFO     | pilot state: finished 
[2026-02-07 22:57:06] 2026-02-07 21:55:08,010 | INFO     | transexitcode: 0
[2026-02-07 22:57:06] 2026-02-07 21:55:08,010 | INFO     | exeerrorcode: 0
[2026-02-07 22:57:06] 2026-02-07 21:55:08,011 | INFO     | exeerrordiag: 
[2026-02-07 22:57:06] 2026-02-07 21:55:08,011 | INFO     | exitcode: 0
[2026-02-07 22:57:06] 2026-02-07 21:55:08,011 | INFO     | exitmsg: OK
[2026-02-07 22:57:06] 2026-02-07 21:55:08,011 | INFO     | cpuconsumptiontime: 61246 s
[2026-02-07 22:57:06] 2026-02-07 21:55:08,011 | INFO     | nevents: 400
[2026-02-07 22:57:06] 2026-02-07 21:55:08,011 | INFO     | neventsw: 0
[2026-02-07 22:57:06] 2026-02-07 21:55:08,011 | INFO     | pid: 4143817
[2026-02-07 22:57:06] 2026-02-07 21:55:08,011 | INFO     | pgrp: 4143817
[2026-02-07 22:57:06] 2026-02-07 21:55:08,012 | INFO     | corecount: 4
[2026-02-07 22:57:06] 2026-02-07 21:55:08,012 | INFO     | event service: False
[2026-02-07 22:57:06] 2026-02-07 21:55:08,012 | INFO     | sizes: {0: 2282895, 1: 2283129, 11: 2283129, 16227: 2314515, 16228: 2323535, 16229: 2323591, 16231: 2323913}
[2026-02-07 22:57:06] 2026-02-07 21:55:08,012 | INFO     | --------------------------------------------------
[2026-02-07 22:57:06] 2026-02-07 21:55:08,012 | INFO     | 
[2026-02-07 22:57:06] 2026-02-07 21:55:08,012 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-02-07 22:57:06] 2026-02-07 21:55:08,038 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,038 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,039 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,039 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,039 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,039 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,039 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,039 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,039 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,039 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,040 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,040 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,040 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,040 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,040 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,040 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,040 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,041 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 22:57:06] 2026-02-07 21:55:08,041 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,041 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 22:57:06] 2026-02-07 21:55:08,041 | INFO     | job 7000907928 has completed (purged errors)
[2026-02-07 22:57:06] 2026-02-07 21:55:08,041 | INFO     | overall cleanup function is called
[2026-02-07 22:57:06] 2026-02-07 21:55:08,341 | WARNING  | process 4143817 can no longer be monitored (due to stat problems) - aborting
[2026-02-07 22:57:06] 2026-02-07 21:55:08,606 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 22:57:06] 2026-02-07 21:55:08,607 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-07 22:57:06] 2026-02-07 21:55:08,607 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-07 22:57:06] 2026-02-07 21:55:08,608 | WARNING  | maxPSS not found in memory monitor output
[2026-02-07 22:57:06] 2026-02-07 21:55:08,608 | INFO     | skipping file size check of payload stdout file (/scratch/boinc/var/slot32/slots/0/PanDA_Pilot-7000907928/payload.stdout) since it has not been created yet
[2026-02-07 22:57:06] 2026-02-07 21:55:08,608 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-02-07 22:57:06] 2026-02-07 21:55:08,627 | INFO     | sufficient remaining disk space (1663393857536 B)
[2026-02-07 22:57:06] 2026-02-07 21:55:08,627 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-07 22:57:06] 2026-02-07 21:55:08,628 | INFO     | output file size check: skipping output file /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-7000907928/HITS.48317952._013034.pool.root.1 since it does not exist
[2026-02-07 22:57:06] 2026-02-07 21:55:08,983 | INFO     | number of running child processes to parent process 4143817: 1
[2026-02-07 22:57:06] 2026-02-07 21:55:08,983 | INFO     | maximum number of monitored processes: 6
[2026-02-07 22:57:06] 2026-02-07 21:55:08,983 | INFO     | aborting job monitoring since job object (job id=7000907928) has expired
[2026-02-07 22:57:06] 2026-02-07 21:55:09,048 | INFO     | --- collectZombieJob: --- 10, [4143817]
[2026-02-07 22:57:06] 2026-02-07 21:55:09,049 | INFO     | zombie collector waiting for pid 4143817
[2026-02-07 22:57:06] 2026-02-07 21:55:09,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 22:57:06] 2026-02-07 21:55:09,049 | INFO     | collected zombie processes
[2026-02-07 22:57:06] 2026-02-07 21:55:09,049 | INFO     | will attempt to kill all subprocesses of pid=4143817
[2026-02-07 22:57:06] 2026-02-07 21:55:09,398 | INFO     | process IDs to be killed: [4143817] (in reverse order)
[2026-02-07 22:57:06] 2026-02-07 21:55:09,477 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 22:57:06] 2026-02-07 21:55:09,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 22:57:06] 2026-02-07 21:55:09,487 | INFO     | did not find any defunct processes belonging to 4143817
[2026-02-07 22:57:06] 2026-02-07 21:55:09,495 | INFO     | did not find any defunct processes belonging to 4143817
[2026-02-07 22:57:06] 2026-02-07 21:55:09,495 | INFO     | ready for new job
[2026-02-07 22:57:06] 2026-02-07 21:55:09,496 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 22:57:06] 2026-02-07 21:55:09,498 | INFO     | **************************************
[2026-02-07 22:57:06] 2026-02-07 21:55:09,498 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 22:57:06] 2026-02-07 21:55:09,498 | INFO     | **************************************
[2026-02-07 22:57:06] 2026-02-07 21:55:09,499 | INFO     | 
[2026-02-07 22:57:06] 2026-02-07 21:55:09,501 | INFO     | architecture information:
[2026-02-07 22:57:06] 2026-02-07 21:55:09,502 | INFO     | executing command: cat /etc/os-release
[2026-02-07 22:57:06] 2026-02-07 21:55:09,515 | INFO     | cat /etc/os-release:
[2026-02-07 22:57:06] NAME="CentOS Linux"
[2026-02-07 22:57:06] VERSION="7 (Core)"
[2026-02-07 22:57:06] ID="centos"
[2026-02-07 22:57:06] ID_LIKE="rhel fedora"
[2026-02-07 22:57:06] VERSION_ID="7"
[2026-02-07 22:57:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 22:57:06] ANSI_COLOR="0;31"
[2026-02-07 22:57:06] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 22:57:06] HOME_URL="https://www.centos.org/"
[2026-02-07 22:57:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 22:57:06] 
[2026-02-07 22:57:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 22:57:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 22:57:06] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 22:57:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 22:57:06] 
[2026-02-07 22:57:06] 2026-02-07 21:55:09,516 | INFO     | **************************************
[2026-02-07 22:57:06] 2026-02-07 21:55:10,019 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-02-07 22:57:06] 2026-02-07 21:55:10,032 | INFO     | sufficient remaining disk space (1663395954688 B)
[2026-02-07 22:57:06] 2026-02-07 21:55:10,032 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 22:57:06] 2026-02-07 21:55:10,032 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 22:57:06] 2026-02-07 21:55:10,032 | INFO     | update_server=False
[2026-02-07 22:57:06] 2026-02-07 21:55:10,033 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 22:57:06] 2026-02-07 21:55:10,033 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 22:57:06] 2026-02-07 21:55:10,033 | INFO     | aborting loop
[2026-02-07 22:57:06] 2026-02-07 21:55:10,135 | INFO     | all data control threads have been joined
[2026-02-07 22:57:06] 2026-02-07 21:55:10,161 | INFO     | all payload control threads have been joined
[2026-02-07 22:57:06] 2026-02-07 21:55:10,551 | INFO     | all job control threads have been joined
[2026-02-07 22:57:06] 2026-02-07 21:55:10,977 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 22:57:06] 2026-02-07 21:55:11,036 | INFO     | [job] job monitor thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,038 | INFO     | [job] retrieve thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,135 | INFO     | [data] control thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,166 | INFO     | [payload] control thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,167 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,329 | INFO     | [data] copytool_in thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,555 | INFO     | [job] control thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,669 | INFO     | [payload] validate_post thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,719 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:11,775 | INFO     | [job] validate thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:12,167 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 22:57:06] 2026-02-07 21:55:12,250 | INFO     | [payload] failed_post thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:12,387 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:12,739 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 22:57:06] 2026-02-07 21:55:12,981 | INFO     | [data] copytool_out thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:13,744 | INFO     | [job] queue monitor thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:16,170 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:20,466 | INFO     | job.realtimelogging is not enabled
[2026-02-07 22:57:06] 2026-02-07 21:55:21,471 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 22:57:06] 2026-02-07 21:55:40,456 | INFO     | PID=4139183 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 22:57:06] 2026-02-07 21:55:40,456 | INFO     | .. there are 2 such processes running
[2026-02-07 22:57:06] 2026-02-07 21:55:40,456 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 22:57:06] 2026-02-07 21:55:40,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 22:57:06] 2026-02-07 21:55:40,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 22:57:06] 2026-02-07 21:55:52,488 | INFO     | [monitor] cgroup control has ended
[2026-02-07 22:57:06] 2026-02-07 21:55:54,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23450113357632)>', '<ExcThread(monitor, started 23449866336000)>']
[2026-02-07 22:57:06] 2026-02-07 21:55:54,480 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 22:57:06] 2026-02-07 21:55:54,480 | INFO     | [monitor] control thread has ended
[2026-02-07 22:57:06] 2026-02-07 21:55:59,211 | INFO     | all workflow threads have been joined
[2026-02-07 22:57:06] 2026-02-07 21:55:59,211 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 22:57:06] 2026-02-07 21:55:59,211 | INFO     | traces error code: 0
[2026-02-07 22:57:06] 2026-02-07 21:55:59,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 22:57:06] 2026-02-07 21:55:59,320 [wrapper] ==== pilot stdout END ====
[2026-02-07 22:57:06] 2026-02-07 21:55:59,323 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 22:57:06] 2026-02-07 21:55:59,326 [wrapper] pilotpid: 4139183
[2026-02-07 22:57:06] 2026-02-07 21:55:59,328 [wrapper] Pilot exit status: 0
[2026-02-07 22:57:06] 2026-02-07 21:55:59,337 [wrapper] pandaids: 7000907928
[2026-02-07 22:57:06] 2026-02-07 21:55:59,396 [wrapper] cleanup supervisor_pilot   53018 4139184
[2026-02-07 22:57:06] 2026-02-07 21:55:59,400 [wrapper] Test setup, not cleaning
[2026-02-07 22:57:06] 2026-02-07 21:55:59,403 [wrapper] apfmon messages muted
[2026-02-07 22:57:06] 2026-02-07 21:55:59,405 [wrapper] ==== wrapper stdout END ====
[2026-02-07 22:57:06] 2026-02-07 21:55:59,408 [wrapper] ==== wrapper stderr END ====
[2026-02-07 22:57:06]  *** Error codes and diagnostics ***
[2026-02-07 22:57:06]     "exeErrorCode": 0,
[2026-02-07 22:57:06]     "exeErrorDiag": "",
[2026-02-07 22:57:06]     "pilotErrorCode": 0,
[2026-02-07 22:57:06]     "pilotErrorDiag": "",
[2026-02-07 22:57:06]  *** Listing of results directory ***
[2026-02-07 22:57:06] total 666788
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:30 pilot3.tar.gz
[2026-02-07 22:57:06] -rwx------ 1 boinc boinc     36322 Feb  6 05:31 runpilot2-wrapper.sh
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc      5111 Feb  6 05:32 queuedata.json
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc       100 Feb  7 17:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 22:57:06] -rwxr-xr-x 1 boinc boinc      7986 Feb  7 17:23 run_atlas
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc       105 Feb  7 17:23 job.xml
[2026-02-07 22:57:06] -rw-r--r-- 2 boinc boinc 493432872 Feb  7 18:24 EVNT.48317949._000247.pool.root.1
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc      6425 Feb  7 18:24 init_data.xml
[2026-02-07 22:57:06] -rw-r--r-- 2 boinc boinc     15845 Feb  7 18:24 start_atlas.sh
[2026-02-07 22:57:06] drwxrwx--x 2 boinc boinc      4096 Feb  7 18:24 shared
[2026-02-07 22:57:06] -rw-r--r-- 2 boinc boinc    597950 Feb  7 18:24 input.tar.gz
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc         0 Feb  7 18:24 boinc_lockfile
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc      2523 Feb  7 18:24 pandaJob.out
[2026-02-07 22:57:06] -rw------- 1 boinc boinc   1009494 Feb  7 18:24 agis_schedconf.cvmfs.json
[2026-02-07 22:57:06] -rw------- 1 boinc boinc       445 Feb  7 18:24 workernode_map.json
[2026-02-07 22:57:06] drwx------ 5 boinc boinc      4096 Feb  7 18:24 pilot3
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc       528 Feb  7 22:54 boinc_task_state.xml
[2026-02-07 22:57:06] -rw------- 1 boinc boinc 180006330 Feb  7 22:54 HITS.48317952._013034.pool.root.1
[2026-02-07 22:57:06] -rw------- 1 boinc boinc      1047 Feb  7 22:55 memory_monitor_summary.json
[2026-02-07 22:57:06] -rw------- 1 boinc boinc        95 Feb  7 22:55 pilot_heartbeat.json
[2026-02-07 22:57:06] -rw------- 1 boinc boinc   1513088 Feb  7 22:55 agis_ddmendpoints.agis.ALL.json
[2026-02-07 22:57:06] -rw------- 1 boinc boinc    430637 Feb  7 22:55 log.48317952._013034.job.log.tgz.1
[2026-02-07 22:57:06] -rw------- 1 boinc boinc      6399 Feb  7 22:55 heartbeat.json
[2026-02-07 22:57:06] -rw------- 1 boinc boinc      4902 Feb  7 22:55 pilotlog.txt
[2026-02-07 22:57:06] -rw------- 1 boinc boinc   2273150 Feb  7 22:55 log.48317952._013034.job.log.1
[2026-02-07 22:57:06] -rw------- 1 boinc boinc       357 Feb  7 22:55 output.list
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc       620 Feb  7 22:55 runtime_log
[2026-02-07 22:57:06] -rw------- 1 boinc boinc   2723840 Feb  7 22:55 result.tar.gz
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc      9205 Feb  7 22:55 runtime_log.err
[2026-02-07 22:57:06] -rw------- 1 boinc boinc       665 Feb  7 22:55 8eMNDmLgS88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmLXXKDma45Tmm.diag
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc        26 Feb  7 22:56 wrapper_checkpoint.txt
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc      8192 Feb  7 22:57 boinc_mmap_file
[2026-02-07 22:57:06] -rw-r--r-- 1 boinc boinc     21280 Feb  7 22:57 stderr.txt
[2026-02-07 22:57:06] HITS file was successfully produced:
[2026-02-07 22:57:06] -rw------- 1 boinc boinc 180006330 Feb  7 22:54 shared/HITS.pool.root.1
[2026-02-07 22:57:06]  *** Contents of shared directory: ***
[2026-02-07 22:57:06] total 660928
[2026-02-07 22:57:06] -rw-r--r-- 2 boinc boinc 493432872 Feb  7 18:24 ATLAS.root_0
[2026-02-07 22:57:06] -rw-r--r-- 2 boinc boinc     15845 Feb  7 18:24 start_atlas.sh
[2026-02-07 22:57:06] -rw-r--r-- 2 boinc boinc    597950 Feb  7 18:24 input.tar.gz
[2026-02-07 22:57:06] -rw------- 1 boinc boinc 180006330 Feb  7 22:54 HITS.pool.root.1
[2026-02-07 22:57:06] -rw------- 1 boinc boinc   2723840 Feb  7 22:55 result.tar.gz
22:57:08 (4135183): run_atlas exited; CPU time 61900.591961
22:57:08 (4135183): called boinc_finish(0)

</stderr_txt>
]]>

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