Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:05:21 (2635769): wrapper (7.7.26015): starting
10:05:21 (2635769): wrapper: running run_atlas (--nthreads 2)
[2026-02-06 10:05:21] Arguments: --nthreads 2
[2026-02-06 10:05:21] Threads: 2
[2026-02-06 10:05:21] Checking for CVMFS
[2026-02-06 10:05:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 10:05:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 10:05:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 10:05:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 10:05:22] 2.9.2.0 2622099 139 49104 155934 1 50 22562413 36864000 0 130560 0 40843 99.953 6935 12818 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 10:05:22] CVMFS is ok
[2026-02-06 10:05:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 10:05:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 10:05:22] Further information can be found at the LHC@home message board.
[2026-02-06 10:05:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 10:05:22] Checking for apptainer binary...
[2026-02-06 10:05:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 10:05:22] Running /usr/bin/apptainer --version
[2026-02-06 10:05:22] apptainer version 1.4.1-1.1
[2026-02-06 10:05:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 10:05:22] thA314b
[2026-02-06 10:05:22] apptainer works
[2026-02-06 10:05:22] Set ATHENA_PROC_NUMBER=2
[2026-02-06 10:05:22] Set ATHENA_CORE_NUMBER=2
[2026-02-06 10:05:22] Starting ATLAS job with PandaID=6996115116
[2026-02-06 10:05:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 12:15:58]  *** The last 200 lines of the pilot log: ***
[2026-02-06 12:15:58] VERSION="7 (Core)"
[2026-02-06 12:15:58] ID="centos"
[2026-02-06 12:15:58] ID_LIKE="rhel fedora"
[2026-02-06 12:15:58] VERSION_ID="7"
[2026-02-06 12:15:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 12:15:58] ANSI_COLOR="0;31"
[2026-02-06 12:15:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 12:15:58] HOME_URL="https://www.centos.org/"
[2026-02-06 12:15:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 12:15:58] 
[2026-02-06 12:15:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 12:15:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 12:15:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 12:15:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 12:15:58] 
[2026-02-06 12:15:58] 2026-02-06 11:15:15,342 | INFO     | **************************************
[2026-02-06 12:15:58] 2026-02-06 11:15:15,845 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-06 12:15:58] 2026-02-06 11:15:15,857 | INFO     | sufficient remaining disk space (501012758528 B)
[2026-02-06 12:15:58] 2026-02-06 11:15:15,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 12:15:58] 2026-02-06 11:15:15,857 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 12:15:58] 2026-02-06 11:15:15,857 | INFO     | update_server=False
[2026-02-06 12:15:58] 2026-02-06 11:15:15,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 12:15:58] 2026-02-06 11:15:15,857 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 12:15:58] 2026-02-06 11:15:15,858 | INFO     | all payload control threads have been joined
[2026-02-06 12:15:58] 2026-02-06 11:15:16,852 | WARNING  | process 2644200 can no longer be monitored (due to stat problems) - aborting
[2026-02-06 12:15:58] 2026-02-06 11:15:16,862 | INFO     | [job] retrieve thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:16,862 | INFO     | all data control threads have been joined
[2026-02-06 12:15:58] 2026-02-06 11:15:16,863 | INFO     | [job] queue monitor thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:16,863 | INFO     | [payload] control thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:16,875 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 12:15:58] 2026-02-06 11:15:16,902 | INFO     | number of running child processes to parent process 2644200: 1
[2026-02-06 12:15:58] 2026-02-06 11:15:16,902 | INFO     | maximum number of monitored processes: 6
[2026-02-06 12:15:58] 2026-02-06 11:15:16,902 | INFO     | aborting job monitoring since job object (job id=6996115116) has expired
[2026-02-06 12:15:58] 2026-02-06 11:15:16,902 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 12:15:58] 2026-02-06 11:15:16,902 | INFO     | will abort loop
[2026-02-06 12:15:58] 2026-02-06 11:15:17,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 12:15:58] 2026-02-06 11:15:17,026 | INFO     | [payload] validate_post thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:17,037 | INFO     | all job control threads have been joined
[2026-02-06 12:15:58] 2026-02-06 11:15:17,078 | INFO     | [data] copytool_in thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:17,195 | INFO     | [payload] failed_post thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:17,541 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 12:15:58] 2026-02-06 11:15:17,868 | INFO     | [data] control thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:17,907 | INFO     | [job] job monitor thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:18,043 | INFO     | [job] control thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:18,203 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:18,262 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:18,269 | INFO     | [job] validate thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:18,308 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:19,020 | INFO     | [data] copytool_out thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:21,548 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:26,655 | INFO     | job.realtimelogging is not enabled
[2026-02-06 12:15:58] 2026-02-06 11:15:27,662 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 12:15:58] 2026-02-06 11:15:45,876 | INFO     | PID=2639793 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 12:15:58] 2026-02-06 11:15:45,876 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 12:15:58] 2026-02-06 11:15:45,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 12:15:58] 2026-02-06 11:15:45,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 12:15:58] 2026-02-06 11:15:51,839 | INFO     | [monitor] cgroup control has ended
[2026-02-06 12:15:58] 2026-02-06 11:15:52,394 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314863040320)>', '<ExcThread(monitor, started 140314090137344)>']
[2026-02-06 12:15:58] 2026-02-06 11:15:52,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 12:15:58] 2026-02-06 11:15:52,909 | INFO     | [monitor] control thread has ended
[2026-02-06 12:15:58] 2026-02-06 11:15:57,419 | INFO     | all workflow threads have been joined
[2026-02-06 12:15:58] 2026-02-06 11:15:57,420 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 12:15:58] 2026-02-06 11:15:57,420 | INFO     | traces error code: 0
[2026-02-06 12:15:58] 2026-02-06 11:15:57,421 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 12:15:58] 2026-02-06 11:15:57,461 [wrapper] ==== pilot stdout END ====
[2026-02-06 12:15:58] 2026-02-06 11:15:57,463 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 12:15:58] 2026-02-06 11:15:57,465 [wrapper] pilotpid: 2639793
[2026-02-06 12:15:58] 2026-02-06 11:15:57,467 [wrapper] Pilot exit status: 0
[2026-02-06 12:15:58] 2026-02-06 11:15:57,473 [wrapper] pandaids: 6996115116
[2026-02-06 12:15:58] 2026-02-06 11:15:57,485 [wrapper] cleanup supervisor_pilot 2649121 2639794
[2026-02-06 12:15:58] 2026-02-06 11:15:57,487 [wrapper] Test setup, not cleaning
[2026-02-06 12:15:58] 2026-02-06 11:15:57,489 [wrapper] apfmon messages muted
[2026-02-06 12:15:58] 2026-02-06 11:15:57,491 [wrapper] ==== wrapper stdout END ====
[2026-02-06 12:15:58] 2026-02-06 11:15:57,493 [wrapper] ==== wrapper stderr END ====
[2026-02-06 12:15:58]  *** Error codes and diagnostics ***
[2026-02-06 12:15:58]     "exeErrorCode": 0,
[2026-02-06 12:15:58]     "exeErrorDiag": "",
[2026-02-06 12:15:58]     "pilotErrorCode": 0,
[2026-02-06 12:15:58]     "pilotErrorDiag": "",
[2026-02-06 12:15:58]  *** Listing of results directory ***
[2026-02-06 12:15:58] total 670292
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:58 pilot3.tar.gz
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc      5111 Feb  6 06:07 queuedata.json
[2026-02-06 12:15:58] -rwx------ 1 boinc boinc     36322 Feb  6 06:08 runpilot2-wrapper.sh
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc       100 Feb  6 10:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 12:15:58] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 10:05 run_atlas
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc       105 Feb  6 10:05 job.xml
[2026-02-06 12:15:58] -rw-r--r-- 2 boinc boinc 492876448 Feb  6 10:05 EVNT.48318008._000169.pool.root.1
[2026-02-06 12:15:58] -rw-r--r-- 2 boinc boinc    597958 Feb  6 10:05 input.tar.gz
[2026-02-06 12:15:58] -rw-r--r-- 2 boinc boinc     15845 Feb  6 10:05 start_atlas.sh
[2026-02-06 12:15:58] drwxrwx--x 2 boinc boinc      4096 Feb  6 10:05 shared
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc         0 Feb  6 10:05 boinc_setup_complete
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc      6207 Feb  6 10:05 init_data.xml
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc         0 Feb  6 10:05 boinc_lockfile
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc      2526 Feb  6 10:05 pandaJob.out
[2026-02-06 12:15:58] -rw------- 1 boinc boinc   1007453 Feb  6 10:05 agis_schedconf.cvmfs.json
[2026-02-06 12:15:58] -rw------- 1 boinc boinc   1513144 Feb  6 10:05 agis_ddmendpoints.agis.ALL.json
[2026-02-06 12:15:58] -rw------- 1 boinc boinc       426 Feb  6 10:05 workernode_map.json
[2026-02-06 12:15:58] drwx------ 5 boinc boinc      4096 Feb  6 10:05 pilot3
[2026-02-06 12:15:58] -rw------- 1 boinc boinc 186704043 Feb  6 12:14 HITS.48318010._009416.pool.root.1
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc       530 Feb  6 12:14 boinc_task_state.xml
[2026-02-06 12:15:58] -rw------- 1 boinc boinc      1018 Feb  6 12:15 memory_monitor_summary.json
[2026-02-06 12:15:58] -rw------- 1 boinc boinc        95 Feb  6 12:15 pilot_heartbeat.json
[2026-02-06 12:15:58] -rw------- 1 boinc boinc    316502 Feb  6 12:15 log.48318010._009416.job.log.tgz.1
[2026-02-06 12:15:58] -rw------- 1 boinc boinc      6308 Feb  6 12:15 heartbeat.json
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc      8192 Feb  6 12:15 boinc_mmap_file
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc        27 Feb  6 12:15 wrapper_checkpoint.txt
[2026-02-06 12:15:58] -rw------- 1 boinc boinc      5344 Feb  6 12:15 pilotlog.txt
[2026-02-06 12:15:58] -rw------- 1 boinc boinc   1115141 Feb  6 12:15 log.48318010._009416.job.log.1
[2026-02-06 12:15:58] -rw------- 1 boinc boinc       357 Feb  6 12:15 output.list
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc       620 Feb  6 12:15 runtime_log
[2026-02-06 12:15:58] -rw------- 1 boinc boinc   1454080 Feb  6 12:15 result.tar.gz
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc      8901 Feb  6 12:15 runtime_log.err
[2026-02-06 12:15:58] -rw------- 1 boinc boinc       658 Feb  6 12:15 WoKNDm9FT88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYtXKDma7zBzm.diag
[2026-02-06 12:15:58] -rw-r--r-- 1 boinc boinc      9389 Feb  6 12:15 stderr.txt
[2026-02-06 12:15:58] HITS file was successfully produced:
[2026-02-06 12:15:58] -rw------- 1 boinc boinc 186704043 Feb  6 12:14 shared/HITS.pool.root.1
[2026-02-06 12:15:58]  *** Contents of shared directory: ***
[2026-02-06 12:15:58] total 665688
[2026-02-06 12:15:58] -rw-r--r-- 2 boinc boinc 492876448 Feb  6 10:05 ATLAS.root_0
[2026-02-06 12:15:58] -rw-r--r-- 2 boinc boinc    597958 Feb  6 10:05 input.tar.gz
[2026-02-06 12:15:58] -rw-r--r-- 2 boinc boinc     15845 Feb  6 10:05 start_atlas.sh
[2026-02-06 12:15:58] -rw------- 1 boinc boinc 186704043 Feb  6 12:14 HITS.pool.root.1
[2026-02-06 12:15:58] -rw------- 1 boinc boinc   1454080 Feb  6 12:15 result.tar.gz
12:15:59 (2635769): run_atlas exited; CPU time 15140.787337
12:15:59 (2635769): called boinc_finish(0)

</stderr_txt>
]]>

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