Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:43:18 (3439715): wrapper (7.7.26015): starting
22:43:18 (3439715): wrapper: running run_atlas (--nthreads 12)
[2026-02-05 22:43:18] Arguments: --nthreads 12
[2026-02-05 22:43:18] Threads: 12
[2026-02-05 22:43:18] Checking for CVMFS
[2026-02-05 22:43:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 22:43:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 22:43:19] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 22:43:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 22:43:20] 2.11.5.0 86566 96541 220968 155931 3 270 32081154 45568000 17882 130560 0 757460519 99.805 457053860 25708 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-05 22:43:20] CVMFS is ok
[2026-02-05 22:43:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 22:43:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 22:43:20] Further information can be found at the LHC@home message board.
[2026-02-05 22:43:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 22:43:20] Checking for apptainer binary...
[2026-02-05 22:43:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 22:43:20] Running /usr/bin/apptainer --version
[2026-02-05 22:43:20] apptainer version 1.4.1-1.el9
[2026-02-05 22:43:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 22:43:20] wns0083.triumf.lcg
[2026-02-05 22:43:20] apptainer works
[2026-02-05 22:43:20] Set ATHENA_PROC_NUMBER=12
[2026-02-05 22:43:20] Set ATHENA_CORE_NUMBER=12
[2026-02-05 22:43:21] Starting ATLAS job with PandaID=6995861555
[2026-02-05 22:43:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 22:48:27]  *** The last 200 lines of the pilot log: ***
[2026-02-05 22:48:27] 2026-02-06 06:47:39,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 22:48:27] 2026-02-06 06:47:39,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | WARNING  | wrong length of table data, x=[1770360310.0], y=[991.0] (must be same and length>=4)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | could have reported an average CPU frequency of 2732 MHz (4 samples)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | ..............................
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . Timing measurements:
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . get job = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . initial setup = 27 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . payload setup = 23 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . stage-in = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . payload execution = 50 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . stage-out = 1 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . log creation = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | ..............................
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6995861555/pilotlog.txt
[2026-02-05 22:48:27] 2026-02-06 06:47:39,345 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-05 22:48:27] - Log from pilotlog.txt -
[2026-02-05 22:48:27] 2026-02-06 06:47:39,278 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6995861555/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,279 | INFO     | extracted standard info from prmon json
[2026-02-05 22:48:27] 2026-02-06 06:47:39,279 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 22:48:27] 2026-02-06 06:47:39,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 22:48:27] 2026-02-06 06:47:39,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | WARNING  | wrong length of table data, x=[1770360310.0], y=[991.0] (must be same and length>=4)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | could have reported an average CPU frequency of 2732 MHz (4 samples)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | ..............................
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . Timing measurements:
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . get job = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . initial setup = 27 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . payload setup = 23 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . stage-in = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . payload execution = 50 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . stage-out = 1 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . log creation = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | ..............................
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6995861555/pilotlog.txt
[2026-02-05 22:48:27] 2026-02-06 06:47:39,346 | WARNING  | 
[2026-02-05 22:48:27] [begin log extracts]
[2026-02-05 22:48:27] - Log from pilotlog.txt -
[2026-02-05 22:48:27] 2026-02-06 06:47:39,278 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6995861555/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,279 | INFO     | extracted standard info from prmon json
[2026-02-05 22:48:27] 2026-02-06 06:47:39,279 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 22:48:27] 2026-02-06 06:47:39,279 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 22:48:27] 2026-02-06 06:47:39,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | WARNING  | wrong length of table data, x=[1770360310.0], y=[991.0] (must be same and length>=4)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | could have reported an average CPU frequency of 2732 MHz (4 samples)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | ..............................
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . Timing measurements:
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . get job = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,291 | INFO     | . initial setup = 27 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . payload setup = 23 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . stage-in = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . payload execution = 50 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . stage-out = 1 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | . log creation = 0 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | ..............................
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-05 22:48:27] 2026-02-06 06:47:39,292 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6995861555/pilotlog.txt
[2026-02-05 22:48:27] [end log extracts]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,346 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,347 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-05 22:48:27] 2026-02-06 06:47:39,720 | INFO     | 
[2026-02-05 22:48:27] 2026-02-06 06:47:39,720 | INFO     | job summary report
[2026-02-05 22:48:27] 2026-02-06 06:47:39,720 | INFO     | --------------------------------------------------
[2026-02-05 22:48:27] 2026-02-06 06:47:39,720 | INFO     | PanDA job id: 6995861555
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | task id: 48318026
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-05 22:45:28,330 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | pilot state: failed 
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | transexitcode: 65
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | exeerrorcode: 65
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | exitcode: 65
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | cpuconsumptiontime: 14 s
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | nevents: 0
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | neventsw: 0
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | pid: 3448181
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | pgrp: 3448181
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | corecount: 12
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | event service: False
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | sizes: {0: 2282645, 1: 2283106, 78: 2306295, 80: 2310587, 82: 2310615, 199: 2310869}
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | --------------------------------------------------
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | 
[2026-02-05 22:48:27] 2026-02-06 06:47:39,721 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-05 22:48:27] 2026-02-06 06:47:39,844 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,845 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,846 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 22:48:27] 2026-02-06 06:47:39,846 | INFO     | job 6995861555 has completed (purged errors)
[2026-02-05 22:48:27] 2026-02-06 06:47:39,846 | INFO     | overall cleanup function is called
[2026-02-05 22:48:27] 2026-02-06 06:47:40,851 | INFO     | --- collectZombieJob: --- 10, [3448181]
[2026-02-05 22:48:27] 2026-02-06 06:47:40,851 | INFO     | zombie collector waiting for pid 3448181
[2026-02-05 22:48:27] 2026-02-06 06:47:40,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 22:48:27] 2026-02-06 06:47:40,851 | INFO     | collected zombie processes
[2026-02-05 22:48:27] 2026-02-06 06:47:40,852 | INFO     | will attempt to kill all subprocesses of pid=3448181
[2026-02-05 22:48:27] 2026-02-06 06:47:41,267 | INFO     | process IDs to be killed: [3448181] (in reverse order)
[2026-02-05 22:48:27] 2026-02-06 06:47:41,343 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 22:48:27] 2026-02-06 06:47:41,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 22:48:27] 2026-02-06 06:47:41,351 | INFO     | did not find any defunct processes belonging to 3448181
[2026-02-05 22:48:27] 2026-02-06 06:47:41,360 | INFO     | did not find any defunct processes belonging to 3448181
[2026-02-05 22:48:27] 2026-02-06 06:47:41,360 | INFO     | ready for new job
[2026-02-05 22:48:27] 2026-02-06 06:47:41,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 22:48:27] 2026-02-06 06:47:41,361 | INFO     | **************************************
[2026-02-05 22:48:27] 2026-02-06 06:47:41,362 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-05 22:48:27] 2026-02-06 06:47:41,362 | INFO     | **************************************
[2026-02-05 22:48:27] 2026-02-06 06:47:41,362 | INFO     | 
[2026-02-05 22:48:27] 2026-02-06 06:47:41,363 | INFO     | architecture information:
[2026-02-05 22:48:27] 2026-02-06 06:47:41,364 | INFO     | executing command: cat /etc/os-release
[2026-02-05 22:48:27] 2026-02-06 06:47:41,375 | INFO     | cat /etc/os-release:
[2026-02-05 22:48:27] NAME="CentOS Linux"
[2026-02-05 22:48:27] VERSION="7 (Core)"
[2026-02-05 22:48:27] ID="centos"
[2026-02-05 22:48:27] ID_LIKE="rhel fedora"
[2026-02-05 22:48:27] VERSION_ID="7"
[2026-02-05 22:48:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 22:48:27] ANSI_COLOR="0;31"
[2026-02-05 22:48:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 22:48:27] HOME_URL="https://www.centos.org/"
[2026-02-05 22:48:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 22:48:27] 
[2026-02-05 22:48:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 22:48:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 22:48:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 22:48:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 22:48:27] 
[2026-02-05 22:48:27] 2026-02-06 06:47:41,376 | INFO     | **************************************
[2026-02-05 22:48:27] 2026-02-06 06:47:41,885 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-05 22:48:27] 2026-02-06 06:47:41,945 | INFO     | sufficient remaining disk space (2094355447808 B)
[2026-02-05 22:48:27] 2026-02-06 06:47:41,945 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 22:48:27] 2026-02-06 06:47:41,945 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 22:48:27] 2026-02-06 06:47:41,945 | INFO     | update_server=False
[2026-02-05 22:48:27] 2026-02-06 06:47:41,945 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 22:48:27] 2026-02-06 06:47:41,955 | INFO     | all payload control threads have been joined
[2026-02-05 22:48:27] 2026-02-06 06:47:42,204 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 22:48:27] 2026-02-06 06:47:42,282 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 22:48:27] 2026-02-06 06:47:42,515 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 22:48:27] 2026-02-06 06:47:42,515 | INFO     | aborting loop
[2026-02-05 22:48:27] 2026-02-06 06:47:42,727 | INFO     | all data control threads have been joined
[2026-02-05 22:48:27] 2026-02-06 06:47:42,951 | INFO     | [job] retrieve thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:42,961 | INFO     | [payload] control thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:43,093 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:43,169 | INFO     | all job control threads have been joined
[2026-02-05 22:48:27] 2026-02-06 06:47:43,255 | INFO     | [job] validate thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:43,465 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:43,521 | INFO     | [job] job monitor thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:43,573 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:43,733 | INFO     | [data] control thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:43,944 | INFO     | [data] copytool_in thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:43,978 | INFO     | [payload] failed_post thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:44,093 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:44,175 | INFO     | [job] control thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:44,214 | INFO     | [data] copytool_out thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:44,467 | INFO     | [payload] validate_post thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:44,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 22:48:27] 2026-02-06 06:47:45,608 | INFO     | [job] queue monitor thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:47:46,291 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 22:48:27] 2026-02-06 06:48:11,746 | INFO     | PID=3443507 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 22:48:27] 2026-02-06 06:48:11,747 | INFO     | .. there are 35 such processes running
[2026-02-05 22:48:27] 2026-02-06 06:48:11,747 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 22:48:27] 2026-02-06 06:48:11,747 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 22:48:27] 2026-02-06 06:48:11,747 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 22:48:27] 2026-02-06 06:48:19,147 | INFO     | [monitor] cgroup control has ended
[2026-02-05 22:48:27] 2026-02-06 06:48:21,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715818264384)>', '<ExcThread(monitor, started 140714537121536)>']
[2026-02-05 22:48:27] 2026-02-06 06:48:21,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 22:48:27] 2026-02-06 06:48:21,808 | INFO     | [monitor] control thread has ended
[2026-02-05 22:48:27] 2026-02-06 06:48:26,235 | INFO     | all workflow threads have been joined
[2026-02-05 22:48:27] 2026-02-06 06:48:26,235 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 22:48:27] 2026-02-06 06:48:26,236 | INFO     | traces error code: 0
[2026-02-05 22:48:27] 2026-02-06 06:48:26,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 22:48:27] 2026-02-06 06:48:26,724 [wrapper] ==== pilot stdout END ====
[2026-02-05 22:48:27] 2026-02-06 06:48:26,738 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 22:48:27] 2026-02-06 06:48:26,747 [wrapper] pilotpid: 3443507
[2026-02-05 22:48:27] 2026-02-06 06:48:26,775 [wrapper] Pilot exit status: 0
[2026-02-05 22:48:27] 2026-02-06 06:48:26,934 [wrapper] pandaids: 6995861555
[2026-02-05 22:48:27] 2026-02-06 06:48:27,218 [wrapper] cleanup supervisor_pilot 3443513 3443508
[2026-02-05 22:48:27] 2026-02-06 06:48:27,236 [wrapper] Test setup, not cleaning
[2026-02-05 22:48:27] 2026-02-06 06:48:27,270 [wrapper] apfmon messages muted
[2026-02-05 22:48:27] 2026-02-06 06:48:27,310 [wrapper] ==== wrapper stdout END ====
[2026-02-05 22:48:27] 2026-02-06 06:48:27,353 [wrapper] ==== wrapper stderr END ====
[2026-02-05 22:48:27]  *** Error codes and diagnostics ***
[2026-02-05 22:48:27]     "exeErrorCode": 65,
[2026-02-05 22:48:27]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-05 22:48:27]     "pilotErrorCode": 1305,
[2026-02-05 22:48:27]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-05 22:48:27]  *** Listing of results directory ***
[2026-02-05 22:48:28] total 522036
[2026-02-05 22:48:28] -rwx------. 1 boinc boinc     36322 Feb  5 20:56 runpilot2-wrapper.sh
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc    584627 Feb  5 20:58 pilot3.tar.gz
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc      5111 Feb  5 20:58 queuedata.json
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc       100 Feb  5 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 22:48:28] -rwxr-xr-x. 1 boinc boinc      7986 Feb  5 22:43 run_atlas
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc       105 Feb  5 22:43 job.xml
[2026-02-05 22:48:28] -rw-r--r--. 2 boinc boinc 530422876 Feb  5 22:43 EVNT.48318024._000038.pool.root.1
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc      6594 Feb  5 22:43 init_data.xml
[2026-02-05 22:48:28] -rw-r--r--. 2 boinc boinc     15845 Feb  5 22:43 start_atlas.sh
[2026-02-05 22:48:28] drwxrwx--x. 2 boinc boinc      4096 Feb  5 22:43 shared
[2026-02-05 22:48:28] -rw-r--r--. 2 boinc boinc    597963 Feb  5 22:43 input.tar.gz
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc         0 Feb  5 22:43 boinc_lockfile
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc      2525 Feb  5 22:43 pandaJob.out
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc   1007445 Feb  5 22:43 agis_schedconf.cvmfs.json
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc   1513144 Feb  5 22:43 agis_ddmendpoints.agis.ALL.json
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc       444 Feb  5 22:44 workernode_map.json
[2026-02-05 22:48:28] drwx------. 5 boinc boinc      4096 Feb  5 22:44 pilot3
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc       953 Feb  5 22:45 memory_monitor_summary.json
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc     21854 Feb  5 22:45 log.48318026._003319.job.log.tgz.1
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc      7021 Feb  5 22:47 heartbeat.json
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc        95 Feb  5 22:48 pilot_heartbeat.json
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc       525 Feb  5 22:48 boinc_task_state.xml
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc      4819 Feb  5 22:48 pilotlog.txt
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc     85439 Feb  5 22:48 log.48318026._003319.job.log.1
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc      8192 Feb  5 22:48 boinc_mmap_file
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc       188 Feb  5 22:48 output.list
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc        22 Feb  5 22:48 wrapper_checkpoint.txt
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc       620 Feb  5 22:48 runtime_log
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc    122880 Feb  5 22:48 result.tar.gz
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc       643 Feb  5 22:48 vq5KDmT4S88n9Rq4apOajLDm4fhM0noT9bVooX4SDmCQXKDmEkTXwm.diag
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc      8635 Feb  5 22:48 runtime_log.err
[2026-02-05 22:48:28] -rw-r--r--. 1 boinc boinc     21762 Feb  5 22:48 stderr.txt
[2026-02-05 22:48:28] No HITS result produced
[2026-02-05 22:48:28]  *** Contents of shared directory: ***
[2026-02-05 22:48:28] total 518716
[2026-02-05 22:48:28] -rw-r--r--. 2 boinc boinc 530422876 Feb  5 22:43 ATLAS.root_0
[2026-02-05 22:48:28] -rw-r--r--. 2 boinc boinc     15845 Feb  5 22:43 start_atlas.sh
[2026-02-05 22:48:28] -rw-r--r--. 2 boinc boinc    597963 Feb  5 22:43 input.tar.gz
[2026-02-05 22:48:28] -rw-------. 1 boinc boinc    122880 Feb  5 22:48 result.tar.gz
22:48:29 (3439715): run_atlas exited; CPU time 23.104991
22:48:29 (3439715): called boinc_finish(0)

</stderr_txt>
]]>

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