Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-06 08:12:12 (75672): vboxwrapper version 26210
2026-02-06 08:12:12 (75672): BOINC client version: 8.2.8
2026-02-06 08:12:13 (75672): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-02-06 08:12:14 (75672): Successfully copied 'init_data.xml' to the shared directory.
2026-02-06 08:12:15 (75672): Create VM. (boinc_b1ea6d696fe4b5f6, slot#1)
2026-02-06 08:12:17 (75672): Setting Memory Size for VM. (4400MB)
2026-02-06 08:12:17 (75672): Setting CPU Count for VM. (4)
2026-02-06 08:12:18 (75672): Setting Chipset Options for VM.
2026-02-06 08:12:18 (75672): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-06 08:12:18 (75672): Setting Boot Options for VM.
2026-02-06 08:12:20 (75672): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-06 08:12:20 (75672): Enabling VM Network Access.
2026-02-06 08:12:20 (75672): Disabling USB Support for VM.
2026-02-06 08:12:21 (75672): Disabling COM Port Support for VM.
2026-02-06 08:12:21 (75672): Disabling LPT Port Support for VM.
2026-02-06 08:12:21 (75672): Disabling Audio Support for VM.
2026-02-06 08:12:22 (75672): Disabling Clipboard Support for VM.
2026-02-06 08:12:22 (75672): Disabling Drag and Drop Support for VM.
2026-02-06 08:12:22 (75672): Adding storage controller(s) to VM.
2026-02-06 08:12:22 (75672): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-06 08:12:24 (75672): Adding VirtualBox Guest Additions to VM.
2026-02-06 08:12:24 (75672): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-06 08:12:24 (75672): forwarding host port 57123 to guest port 80
2026-02-06 08:12:25 (75672): Enabling remote desktop for VM.
2026-02-06 08:12:26 (75672): Enabling shared directory for VM.
2026-02-06 08:12:28 (75672): Starting VM using VBoxManage interface. (boinc_b1ea6d696fe4b5f6, slot#1)
2026-02-06 08:13:02 (75672): Successfully started VM. (PID = '171156')
2026-02-06 08:13:02 (75672): Reporting VM Process ID to BOINC.
2026-02-06 08:13:02 (75672): Guest Log: BIOS: VirtualBox 7.2.4
2026-02-06 08:13:02 (75672): Guest Log: CPUID EDX: 0x178bfbff
2026-02-06 08:13:02 (75672): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-06 08:13:02 (75672): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-06 08:13:02 (75672): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-06 08:13:02 (75672): Detected: Web Application Enabled (http://localhost:57123)
2026-02-06 08:13:02 (75672): Detected: Remote Desktop Enabled (localhost:57126)
2026-02-06 08:13:02 (75672): Preference change detected
2026-02-06 08:13:02 (75672): Setting CPU throttle for VM. (100%)
2026-02-06 08:13:02 (75672): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-06 08:13:04 (75672): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-06 08:13:04 (75672): Guest Log: BIOS: Booting from Hard Disk...
2026-02-06 08:13:09 (75672): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-06 08:13:09 (75672): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-06 08:13:09 (75672): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-06 08:13:30 (75672): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-06 08:13:30 (75672): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-06 08:14:46 (75672): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-06 08:14:46 (75672): Guest Log: 00:00:00.000813 main     Log opened 2026-02-06T08:14:44.948961000Z
2026-02-06 08:14:46 (75672): Guest Log: 00:00:00.001607 main     OS Product: Linux
2026-02-06 08:14:46 (75672): Guest Log: 00:00:00.001859 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-06 08:14:46 (75672): Guest Log: 00:00:00.002029 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-06 08:14:46 (75672): Guest Log: 00:00:00.002360 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-06 08:14:46 (75672): Guest Log: 00:00:00.002366 main     Process ID: 1340
2026-02-06 08:14:46 (75672): Guest Log: 00:00:00.002370 main     Package type: LINUX_64BITS_GENERIC
2026-02-06 08:14:46 (75672): Guest Log: 00:00:00.006675 main     5.2.32 r132073 started. Verbose level = 0
2026-02-06 08:14:48 (75672): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-06 08:14:48 (75672): Guest Log: [INFO] Mounting shared directory
2026-02-06 08:14:48 (75672): Guest Log: [INFO] Checking for init_data.xml
2026-02-06 08:14:56 (75672): Guest Log: 00:00:10.015062 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 831 523 000ns (GuestNow=1 770 362 096 131 342 000 ns GuestLast=1 770 365 684 962 865 000 ns fSetTimeLastLoop=true )
2026-02-06 08:14:56 (75672): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-06 08:14:56 (75672): Guest Log: [INFO] Detected branch: prod
2026-02-06 08:14:56 (75672): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-06 08:14:56 (75672): Guest Log: Copying input files
2026-02-06 08:16:00 (75672): Guest Log: Copied input files into RunAtlas.
2026-02-06 08:16:00 (75672): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-02-06 08:16:00 (75672): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-02-06 08:16:00 (75672): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-02-06 08:16:00 (75672): Guest Log: Further information can be found at the LHC@home message board.
2026-02-06 08:16:23 (75672): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-06 08:16:24 (75672): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-06 08:16:24 (75672): Guest Log: 2.6.3.0 1618 1 30164 155933 4 1 3117739 4096000 0 65024 0 0 n/a 1 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-02-06 08:16:33 (75672): Guest Log: copied the webapp to /var/www
2026-02-06 08:16:33 (75672): Guest Log: ATHENA_PROC_NUMBER=4
2026-02-06 08:16:33 (75672): Guest Log: ATHENA_CORE_NUMBER=4
2026-02-06 08:16:34 (75672): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-06 08:16:34 (75672): Guest Log:  *** Starting ATLAS job. (PandaID=6995838835 taskID=48318042) ***
2026-02-06 09:57:32 (75672): Status Report: Elapsed Time: '6000.486198'
2026-02-06 09:57:32 (75672): Status Report: CPU Time: '19032.906250'
2026-02-06 11:40:41 (75672): Status Report: Elapsed Time: '12001.462027'
2026-02-06 11:40:41 (75672): Status Report: CPU Time: '42353.890625'
2026-02-06 13:24:33 (75672): Status Report: Elapsed Time: '18003.214705'
2026-02-06 13:24:33 (75672): Status Report: CPU Time: '65587.328125'
2026-02-06 15:09:57 (75672): Status Report: Elapsed Time: '24003.693619'
2026-02-06 15:09:57 (75672): Status Report: CPU Time: '88871.953125'
2026-02-06 16:54:57 (75672): Status Report: Elapsed Time: '30004.459499'
2026-02-06 16:54:57 (75672): Status Report: CPU Time: '112753.812500'
2026-02-06 17:55:58 (75672): Guest Log:  *** Job finished ***
2026-02-06 17:55:58 (75672): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:03,176 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:03,176 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:05,902 | INFO     | [monitor] cgroup control has ended
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:06,657 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140250322020160)>', '<ExcThread(monitor, started 140249640449792)>']
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:07,190 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:07,191 | INFO     | [monitor] control thread has ended
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:11,664 | INFO     | all workflow threads have been joined
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:11,665 | INFO     | end of generic workflow (traces error code: 0)
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:11,666 | INFO     | traces error code: 0
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:11,667 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,535 [wrapper] ==== pilot stdout END ====
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,548 [wrapper] ==== wrapper stdout RESUME ====
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,561 [wrapper] pilotpid: 6049
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,575 [wrapper] Pilot exit status: 0
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,821 [wrapper] pandaids: 6995838835
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,886 [wrapper] cleanup supervisor_pilot  2282 6050
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,895 [wrapper] Test setup, not cleaning
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,902 [wrapper] apfmon messages muted
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,909 [wrapper] ==== wrapper stdout END ====
2026-02-06 17:55:58 (75672): Guest Log: 2026-02-06 16:55:13,916 [wrapper] ==== wrapper stderr END ====
2026-02-06 17:55:58 (75672): Guest Log:  *** Error codes and diagnostics ***
2026-02-06 17:55:58 (75672): Guest Log:     "exeErrorCode": 0,
2026-02-06 17:55:58 (75672): Guest Log:     "exeErrorDiag": "",
2026-02-06 17:55:58 (75672): Guest Log:     "pilotErrorCode": 0,
2026-02-06 17:55:58 (75672): Guest Log:     "pilotErrorDiag": "",
2026-02-06 17:55:58 (75672): Guest Log:  *** Listing of results directory ***
2026-02-06 17:55:58 (75672): Guest Log: total 197288
2026-02-06 17:55:58 (75672): Guest Log: -rwx------. 1 atlas atlas     36322 Feb  6 04:55 runpilot2-wrapper.sh
2026-02-06 17:55:58 (75672): Guest Log: -rw-r--r--. 1 atlas atlas    584627 Feb  6 04:58 pilot3.tar.gz
2026-02-06 17:55:58 (75672): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Feb  6 04:58 queuedata.json
2026-02-06 17:55:58 (75672): Guest Log: -rwxr-xr-x. 1 atlas atlas      5797 Feb  6 07:15 init_data.xml
2026-02-06 17:55:58 (75672): Guest Log: -rwxr-xr-x. 1 atlas atlas    597961 Feb  6 07:15 input.tar.gz
2026-02-06 17:55:58 (75672): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Feb  6 07:15 start_atlas.sh
2026-02-06 17:55:58 (75672): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  6 07:15 EVNT.48318040._000184.pool.root.1 -> /data/./ATLAS.root_0
2026-02-06 17:55:58 (75672): Guest Log: -rw-r--r--. 1 atlas atlas      2536 Feb  6 07:16 pandaJob.out
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas   1007453 Feb  6 07:19 agis_schedconf.cvmfs.json
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas       426 Feb  6 07:19 workernode_map.json
2026-02-06 17:55:58 (75672): Guest Log: drwx------. 5 atlas atlas      4096 Feb  6 07:19 pilot3
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas 187343216 Feb  6 16:53 HITS.48318042._009626.pool.root.1
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas         0 Feb  6 16:54 memory_monitor_summary.json
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas   1513088 Feb  6 16:54 agis_ddmendpoints.agis.ALL.json
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas    715832 Feb  6 16:54 log.48318042._009626.job.log.tgz.1
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas      6372 Feb  6 16:54 heartbeat.json
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas        95 Feb  6 16:55 pilot_heartbeat.json
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas      4873 Feb  6 16:55 pilotlog.txt
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas   4697542 Feb  6 16:55 log.48318042._009626.job.log.1
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas       357 Feb  6 16:55 output.list
2026-02-06 17:55:58 (75672): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  6 16:55 runtime_log
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas   5427200 Feb  6 16:55 result.tar.gz
2026-02-06 17:55:58 (75672): Guest Log: -rw-r--r--. 1 atlas atlas      8770 Feb  6 16:55 runtime_log.err
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas       663 Feb  6 16:55 MH6LDmo3S88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBpXKDmzDoGKo.diag
2026-02-06 17:55:58 (75672): Guest Log: Looking for outputfile HITS.48318042._009626.pool.root.1
2026-02-06 17:55:58 (75672): Guest Log: HITS file was successfully produced
2026-02-06 17:55:58 (75672): Guest Log: -rw-------. 1 atlas atlas 187343216 Feb  6 16:53 /home/atlas/RunAtlas/HITS.48318042._009626.pool.root.1
2026-02-06 17:55:58 (75672): Guest Log: Successfully finished the ATLAS job!
2026-02-06 17:55:58 (75672): Guest Log: Copying the results back to the shared directory!
2026-02-06 17:55:58 (75672): Guest Log:  *** Contents of shared directory: ***
2026-02-06 17:55:58 (75672): Guest Log: total 675480
2026-02-06 17:55:58 (75672): Guest Log: -rwxrwxrwx. 1 root root 498291694 Feb  6 07:12 ATLAS.root_0
2026-02-06 17:55:58 (75672): Guest Log: -rwxrwxrwx. 1 root root 187343216 Feb  6 16:55 HITS.pool.root.1
2026-02-06 17:55:58 (75672): Guest Log: -rwxrwxrwx. 1 root root      5797 Feb  6 07:12 init_data.xml
2026-02-06 17:55:58 (75672): Guest Log: -rwxrwxrwx. 1 root root    597961 Feb  6 06:08 input.tar.gz
2026-02-06 17:55:58 (75672): Guest Log: -rwxrwxrwx. 1 root root   5427200 Feb  6 16:55 result.tar.gz
2026-02-06 17:55:59 (75672): Guest Log: -rwxrwxrwx. 1 root root     15845 Feb  6 06:08 start_atlas.sh
2026-02-06 17:55:59 (75672): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-06 17:55:59 (75672): VM Completion File Detected.
2026-02-06 17:55:59 (75672): Powering off VM.
2026-02-06 17:56:31 (75672): Guest Log: 09:41:22.427259 control  Guest control service stopped
2026-02-06 17:56:31 (75672): Guest Log: 09:41:23.259593 control  Guest control worker returned with rc=VINF_SUCCESS
2026-02-06 17:56:31 (75672): Guest Log: 09:41:23.259759 main     Session 0 is about to close ...
2026-02-06 17:56:31 (75672): Guest Log: 09:41:23.259845 main     Stopping all guest processes ...
2026-02-06 17:56:31 (75672): Guest Log: 09:41:23.259911 main     Closing all guest files ...
2026-02-06 17:56:31 (75672): Guest Log: 09:41:23.581973 main     Ended.
2026-02-06 17:56:32 (75672): Successfully stopped VM.
2026-02-06 17:56:32 (75672): Deregistering VM. (boinc_b1ea6d696fe4b5f6, slot#1)
2026-02-06 17:56:35 (75672): Removing network bandwidth throttle group from VM.
2026-02-06 17:56:36 (75672): Removing VM from VirtualBox.
2026-02-06 17:56:46 (75672): called boinc_finish(0)

</stderr_txt>
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