Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:03:03 (2050322): wrapper (7.7.26015): starting
06:03:03 (2050322): wrapper: running run_atlas (--nthreads 2)
[2026-02-06 06:03:03] Arguments: --nthreads 2
[2026-02-06 06:03:03] Threads: 2
[2026-02-06 06:03:03] Checking for CVMFS
[2026-02-06 06:03:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 06:03:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 06:03:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 06:03:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 06:03:04] 2.9.2.0 2050517 0 29832 155928 4 1 33123159 36864001 0 130560 0 0 0.000 1336 5859 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-06 06:03:04] CVMFS is ok
[2026-02-06 06:03:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 06:03:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 06:03:04] Further information can be found at the LHC@home message board.
[2026-02-06 06:03:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 06:03:04] Checking for apptainer binary...
[2026-02-06 06:03:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 06:03:04] Running /usr/bin/apptainer --version
[2026-02-06 06:03:04] apptainer version 1.4.1-1.1
[2026-02-06 06:03:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 06:03:04] atlasA229
[2026-02-06 06:03:04] apptainer works
[2026-02-06 06:03:05] Set ATHENA_PROC_NUMBER=2
[2026-02-06 06:03:05] Set ATHENA_CORE_NUMBER=2
[2026-02-06 06:03:05] Starting ATLAS job with PandaID=7000906610
[2026-02-06 06:03:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 08:11:40]  *** The last 200 lines of the pilot log: ***
[2026-02-06 08:11:40] 2026-02-06 07:11:03,785 | INFO     | all data control threads have been joined
[2026-02-06 08:11:40] 2026-02-06 07:11:04,523 | INFO     | all payload control threads have been joined
[2026-02-06 08:11:40] 2026-02-06 07:11:04,608 | INFO     | [job] queue monitor thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:04,609 | INFO     | [job] retrieve thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:04,738 | INFO     | job.realtimelogging is not enabled
[2026-02-06 08:11:40] 2026-02-06 07:11:04,791 | INFO     | [data] control thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:04,825 | INFO     | [payload] failed_post thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:04,952 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 08:11:40] 2026-02-06 07:11:05,057 | WARNING  | process 2058987 can no longer be monitored (due to stat problems) - aborting
[2026-02-06 08:11:40] 2026-02-06 07:11:05,082 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 08:11:40] 2026-02-06 07:11:05,111 | INFO     | number of running child processes to parent process 2058987: 1
[2026-02-06 08:11:40] 2026-02-06 07:11:05,111 | INFO     | maximum number of monitored processes: 6
[2026-02-06 08:11:40] 2026-02-06 07:11:05,111 | INFO     | aborting job monitoring since job object (job id=7000906610) has expired
[2026-02-06 08:11:40] 2026-02-06 07:11:05,111 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 08:11:40] 2026-02-06 07:11:05,111 | INFO     | will abort loop
[2026-02-06 08:11:40] 2026-02-06 07:11:05,293 | INFO     | all job control threads have been joined
[2026-02-06 08:11:40] 2026-02-06 07:11:05,462 | INFO     | [job] validate thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:05,529 | INFO     | [payload] control thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:05,629 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:05,686 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:05,745 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:05,748 | INFO     | [data] copytool_in thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:05,763 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:05,856 | INFO     | [payload] validate_post thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:06,117 | INFO     | [job] job monitor thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:06,299 | INFO     | [job] control thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:06,958 | INFO     | [data] copytool_out thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:07,609 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 08:11:40] 2026-02-06 07:11:33,562 | INFO     | PID=2054575 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 08:11:40] 2026-02-06 07:11:33,562 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 08:11:40] 2026-02-06 07:11:33,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 08:11:40] 2026-02-06 07:11:33,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 08:11:40] 2026-02-06 07:11:35,084 | INFO     | [monitor] cgroup control has ended
[2026-02-06 08:11:40] 2026-02-06 07:11:35,647 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140130558326592)>', '<ExcThread(monitor, started 140130035668736)>']
[2026-02-06 08:11:40] 2026-02-06 07:11:36,578 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 08:11:40] 2026-02-06 07:11:36,578 | INFO     | [monitor] control thread has ended
[2026-02-06 08:11:40] 2026-02-06 07:11:40,659 | INFO     | all workflow threads have been joined
[2026-02-06 08:11:40] 2026-02-06 07:11:40,659 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 08:11:40] 2026-02-06 07:11:40,660 | INFO     | traces error code: 0
[2026-02-06 08:11:40] 2026-02-06 07:11:40,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 08:11:40] 2026-02-06 07:11:40,703 [wrapper] ==== pilot stdout END ====
[2026-02-06 08:11:40] 2026-02-06 07:11:40,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 08:11:40] 2026-02-06 07:11:40,708 [wrapper] pilotpid: 2054575
[2026-02-06 08:11:40] 2026-02-06 07:11:40,710 [wrapper] Pilot exit status: 0
[2026-02-06 08:11:40] 2026-02-06 07:11:40,717 [wrapper] pandaids: 7000906610
[2026-02-06 08:11:40] 2026-02-06 07:11:40,729 [wrapper] cleanup supervisor_pilot 2063887 2054576
[2026-02-06 08:11:40] 2026-02-06 07:11:40,731 [wrapper] Test setup, not cleaning
[2026-02-06 08:11:40] 2026-02-06 07:11:40,734 [wrapper] apfmon messages muted
[2026-02-06 08:11:40] 2026-02-06 07:11:40,736 [wrapper] ==== wrapper stdout END ====
[2026-02-06 08:11:40] 2026-02-06 07:11:40,738 [wrapper] ==== wrapper stderr END ====
[2026-02-06 08:11:40]  *** Error codes and diagnostics ***
[2026-02-06 08:11:40]     "exeErrorCode": 0,
[2026-02-06 08:11:40]     "exeErrorDiag": "",
[2026-02-06 08:11:40]     "pilotErrorCode": 0,
[2026-02-06 08:11:40]     "pilotErrorDiag": "",
[2026-02-06 08:11:40]  *** Listing of results directory ***
[2026-02-06 08:11:40] total 670260
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:30 pilot3.tar.gz
[2026-02-06 08:11:40] -rwx------ 1 boinc boinc     36322 Feb  6 05:33 runpilot2-wrapper.sh
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc      5111 Feb  6 05:35 queuedata.json
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc       100 Feb  6 06:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 08:11:40] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 06:03 run_atlas
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc       105 Feb  6 06:03 job.xml
[2026-02-06 08:11:40] -rw-r--r-- 2 boinc boinc 493736645 Feb  6 06:03 EVNT.48317929._000317.pool.root.1
[2026-02-06 08:11:40] -rw-r--r-- 2 boinc boinc    597951 Feb  6 06:03 input.tar.gz
[2026-02-06 08:11:40] -rw-r--r-- 2 boinc boinc     15845 Feb  6 06:03 start_atlas.sh
[2026-02-06 08:11:40] drwxrwx--x 2 boinc boinc      4096 Feb  6 06:03 shared
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc         0 Feb  6 06:03 boinc_setup_complete
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc      6206 Feb  6 06:03 init_data.xml
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc         0 Feb  6 06:03 boinc_lockfile
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc      2512 Feb  6 06:03 pandaJob.out
[2026-02-06 08:11:40] -rw------- 1 boinc boinc   1007461 Feb  6 06:03 agis_schedconf.cvmfs.json
[2026-02-06 08:11:40] -rw------- 1 boinc boinc   1513144 Feb  6 06:03 agis_ddmendpoints.agis.ALL.json
[2026-02-06 08:11:40] -rw------- 1 boinc boinc       422 Feb  6 06:03 workernode_map.json
[2026-02-06 08:11:40] drwx------ 5 boinc boinc      4096 Feb  6 06:03 pilot3
[2026-02-06 08:11:40] -rw------- 1 boinc boinc 185920348 Feb  6 08:10 HITS.48317931._017351.pool.root.1
[2026-02-06 08:11:40] -rw------- 1 boinc boinc        95 Feb  6 08:10 pilot_heartbeat.json
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc       530 Feb  6 08:10 boinc_task_state.xml
[2026-02-06 08:11:40] -rw------- 1 boinc boinc      1011 Feb  6 08:10 memory_monitor_summary.json
[2026-02-06 08:11:40] -rw------- 1 boinc boinc    279575 Feb  6 08:11 log.48317931._017351.job.log.tgz.1
[2026-02-06 08:11:40] -rw------- 1 boinc boinc      6297 Feb  6 08:11 heartbeat.json
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc      8192 Feb  6 08:11 boinc_mmap_file
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc        27 Feb  6 08:11 wrapper_checkpoint.txt
[2026-02-06 08:11:40] -rw------- 1 boinc boinc      5344 Feb  6 08:11 pilotlog.txt
[2026-02-06 08:11:40] -rw------- 1 boinc boinc   1101087 Feb  6 08:11 log.48317931._017351.job.log.1
[2026-02-06 08:11:40] -rw------- 1 boinc boinc       357 Feb  6 08:11 output.list
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc       620 Feb  6 08:11 runtime_log
[2026-02-06 08:11:40] -rw------- 1 boinc boinc   1402880 Feb  6 08:11 result.tar.gz
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc      8911 Feb  6 08:11 runtime_log.err
[2026-02-06 08:11:40] -rw------- 1 boinc boinc       660 Feb  6 08:11 WVIODm3hS88n9Rq4apOajLDm4fhM0noT9bVooX4SDms9WKDmEgxvmn.diag
[2026-02-06 08:11:40] -rw-r--r-- 1 boinc boinc      7651 Feb  6 08:11 stderr.txt
[2026-02-06 08:11:40] HITS file was successfully produced:
[2026-02-06 08:11:40] -rw------- 1 boinc boinc 185920348 Feb  6 08:10 shared/HITS.pool.root.1
[2026-02-06 08:11:40]  *** Contents of shared directory: ***
[2026-02-06 08:11:40] total 665712
[2026-02-06 08:11:40] -rw-r--r-- 2 boinc boinc 493736645 Feb  6 06:03 ATLAS.root_0
[2026-02-06 08:11:40] -rw-r--r-- 2 boinc boinc    597951 Feb  6 06:03 input.tar.gz
[2026-02-06 08:11:40] -rw-r--r-- 2 boinc boinc     15845 Feb  6 06:03 start_atlas.sh
[2026-02-06 08:11:40] -rw------- 1 boinc boinc 185920348 Feb  6 08:10 HITS.pool.root.1
[2026-02-06 08:11:40] -rw------- 1 boinc boinc   1402880 Feb  6 08:11 result.tar.gz
08:11:41 (2050322): run_atlas exited; CPU time 14921.043819
08:11:41 (2050322): called boinc_finish(0)

</stderr_txt>
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