Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:11:19 (2570926): wrapper (7.7.26015): starting
09:11:19 (2570926): wrapper: running run_atlas (--nthreads 4)
[2026-02-06 09:11:19] Arguments: --nthreads 4
[2026-02-06 09:11:19] Threads: 4
[2026-02-06 09:11:19] Checking for CVMFS
[2026-02-06 09:11:19] No cvmfs_config command found, will try listing directly
[2026-02-06 09:11:19] CVMFS is ok
[2026-02-06 09:11:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 09:11:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 09:11:19] Further information can be found at the LHC@home message board.
[2026-02-06 09:11:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 09:11:19] Checking for apptainer binary...
[2026-02-06 09:11:19] which: no apptainer in ((null))
[2026-02-06 09:11:19] apptainer is not installed, using version from CVMFS
[2026-02-06 09:11:19] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 09:11:19] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2026-02-06 09:11:19] apptainer works
[2026-02-06 09:11:19] Set ATHENA_PROC_NUMBER=4
[2026-02-06 09:11:19] Set ATHENA_CORE_NUMBER=4
[2026-02-06 09:11:19] Starting ATLAS job with PandaID=7000907560
[2026-02-06 09:11:19] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 12:42:36]  *** The last 200 lines of the pilot log: ***
[2026-02-06 12:42:36] 2026-02-06 11:39:10,822 | INFO     | time since job start (12455s) is within the limit (349056.0s)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,381 | INFO     | job 7000907560 has state=finished
[2026-02-06 12:42:36] 2026-02-06 11:39:11,382 | INFO     | preparing for final server update for job 7000907560 in state='finished'
[2026-02-06 12:42:36] 2026-02-06 11:39:11,382 | INFO     | reading metadata from: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-7000907560/jobReport.json
[2026-02-06 12:42:36] 2026-02-06 11:39:11,385 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot32/slots/0/workernode_map.json
[2026-02-06 12:42:36] 2026-02-06 11:39:11,385 | INFO     | this job has now completed (state=finished)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,385 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,386 | INFO     | log transfer has been attempted: DONE
[2026-02-06 12:42:36] 2026-02-06 11:39:11,386 | INFO     | job 7000907560 has finished - writing final server update
[2026-02-06 12:42:36] 2026-02-06 11:39:11,386 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2444208/.job.ad'
[2026-02-06 12:42:36] 2026-02-06 11:39:11,386 | INFO     | total number of processed events: 400 (read)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,394 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-7000907560/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,395 | INFO     | extracted standard info from prmon json
[2026-02-06 12:42:36] 2026-02-06 11:39:11,395 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 12:42:36] 2026-02-06 11:39:11,395 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 12:42:36] 2026-02-06 11:39:11,395 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 12:42:36] 2026-02-06 11:39:11,396 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 12:42:36] 2026-02-06 11:39:11,400 | INFO     | fitting pss+swap vs Time
[2026-02-06 12:42:36] 2026-02-06 11:39:11,400 | INFO     | sum of square deviations: 2632440055.0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,402 | INFO     | sum of deviations: -7643196147.499997
[2026-02-06 12:42:36] 2026-02-06 11:39:11,402 | INFO     | mean x: 1770371708.5
[2026-02-06 12:42:36] 2026-02-06 11:39:11,402 | INFO     | mean y: 2395957.0343137253
[2026-02-06 12:42:36] 2026-02-06 11:39:11,402 | INFO     | intersect: 5142607296.832586
[2026-02-06 12:42:36] 2026-02-06 11:39:11,403 | INFO     | chi2: 1.4460953820205058
[2026-02-06 12:42:36] 2026-02-06 11:39:11,403 | INFO     | sum of square deviations: 2443580700.0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,404 | INFO     | sum of deviations: -6606092112.000004
[2026-02-06 12:42:36] 2026-02-06 11:39:11,405 | INFO     | mean x: 1770371556.0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,405 | INFO     | mean y: 2396794.648241206
[2026-02-06 12:42:36] 2026-02-06 11:39:11,405 | INFO     | intersect: 4788503335.512954
[2026-02-06 12:42:36] 2026-02-06 11:39:11,405 | INFO     | chi2: 1.4467563755815431
[2026-02-06 12:42:36] 2026-02-06 11:39:11,405 | INFO     | current chi2=1.4467563755815431 (change=-0.04570884944766066 %)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,405 | INFO     | right removable region: 198
[2026-02-06 12:42:36] 2026-02-06 11:39:11,406 | INFO     | sum of square deviations: 2443580700.0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,407 | INFO     | sum of deviations: -36543165385.0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,407 | INFO     | mean x: 1770371861.0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,407 | INFO     | mean y: 2419038.6683417084
[2026-02-06 12:42:36] 2026-02-06 11:39:11,407 | INFO     | intersect: 26477907124.44068
[2026-02-06 12:42:36] 2026-02-06 11:39:11,408 | INFO     | chi2: 0.045674156212644965
[2026-02-06 12:42:36] 2026-02-06 11:39:11,408 | INFO     | current chi2=0.045674156212644965 (change=96.84155299985618 %)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,408 | INFO     | sum of square deviations: 2263977332.5
[2026-02-06 12:42:36] 2026-02-06 11:39:11,410 | INFO     | sum of deviations: -35646841175.5
[2026-02-06 12:42:36] 2026-02-06 11:39:11,410 | INFO     | mean x: 1770372013.5
[2026-02-06 12:42:36] 2026-02-06 11:39:11,410 | INFO     | mean y: 2418273.0773195876
[2026-02-06 12:42:36] 2026-02-06 11:39:11,410 | INFO     | intersect: 27877330747.17765
[2026-02-06 12:42:36] 2026-02-06 11:39:11,410 | INFO     | chi2: 0.04245116818256027
[2026-02-06 12:42:36] 2026-02-06 11:39:11,411 | INFO     | current chi2=0.04245116818256027 (change=7.0564807263859315 %)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,411 | INFO     | left removable region: 20
[2026-02-06 12:42:36] 2026-02-06 11:39:11,411 | INFO     | sum of square deviations: 1748737904.5
[2026-02-06 12:42:36] 2026-02-06 11:39:11,412 | INFO     | sum of deviations: -30613472047.499996
[2026-02-06 12:42:36] 2026-02-06 11:39:11,412 | INFO     | mean x: 1770372135.5
[2026-02-06 12:42:36] 2026-02-06 11:39:11,412 | INFO     | mean y: 2417045.893258427
[2026-02-06 12:42:36] 2026-02-06 11:39:11,413 | INFO     | intersect: 30994618761.391743
[2026-02-06 12:42:36] 2026-02-06 11:39:11,413 | INFO     | chi2: 0.03841319526492265
[2026-02-06 12:42:36] 2026-02-06 11:39:11,413 | INFO     | current memory leak: -17.51 B/s (using 178 data points, chi2=0.04)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,414 | INFO     | could have reported an average CPU frequency of 2501 MHz (10 samples)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,414 | INFO     | ..............................
[2026-02-06 12:42:36] 2026-02-06 11:39:11,414 | INFO     | . Timing measurements:
[2026-02-06 12:42:36] 2026-02-06 11:39:11,414 | INFO     | . get job = 0 s
[2026-02-06 12:42:36] 2026-02-06 11:39:11,414 | INFO     | . initial setup = 5 s
[2026-02-06 12:42:36] 2026-02-06 11:39:11,414 | INFO     | . payload setup = 5 s
[2026-02-06 12:42:36] 2026-02-06 11:39:11,415 | INFO     | . stage-in = 0 s
[2026-02-06 12:42:36] 2026-02-06 11:39:11,415 | INFO     | . payload execution = 12429 s
[2026-02-06 12:42:36] 2026-02-06 11:39:11,415 | INFO     | . stage-out = 1 s
[2026-02-06 12:42:36] 2026-02-06 11:39:11,415 | INFO     | . log creation = 0 s
[2026-02-06 12:42:36] 2026-02-06 11:39:11,415 | INFO     | ..............................
[2026-02-06 12:42:36] 2026-02-06 11:39:11,518 | INFO     | 
[2026-02-06 12:42:36] 2026-02-06 11:39:11,518 | INFO     | job summary report
[2026-02-06 12:42:36] 2026-02-06 11:39:11,518 | INFO     | --------------------------------------------------
[2026-02-06 12:42:36] 2026-02-06 11:39:11,518 | INFO     | PanDA job id: 7000907560
[2026-02-06 12:42:36] 2026-02-06 11:39:11,518 | INFO     | task id: 48317931
[2026-02-06 12:42:36] 2026-02-06 11:39:11,518 | INFO     | errors: (none)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | pilot state: finished 
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | transexitcode: 0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | exeerrorcode: 0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | exeerrordiag: 
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | exitcode: 0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | exitmsg: OK
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | cpuconsumptiontime: 48168 s
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | nevents: 400
[2026-02-06 12:42:36] 2026-02-06 11:39:11,519 | INFO     | neventsw: 0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,520 | INFO     | pid: 2579554
[2026-02-06 12:42:36] 2026-02-06 11:39:11,520 | INFO     | pgrp: 2579554
[2026-02-06 12:42:36] 2026-02-06 11:39:11,520 | INFO     | corecount: 4
[2026-02-06 12:42:36] 2026-02-06 11:39:11,520 | INFO     | event service: False
[2026-02-06 12:42:36] 2026-02-06 11:39:11,520 | INFO     | sizes: {0: 2282607, 1: 2283068, 11: 2283068, 12438: 2312927, 12439: 2312926, 12441: 2322002, 12442: 2322186, 12444: 2322380}
[2026-02-06 12:42:36] 2026-02-06 11:39:11,520 | INFO     | --------------------------------------------------
[2026-02-06 12:42:36] 2026-02-06 11:39:11,520 | INFO     | 
[2026-02-06 12:42:36] 2026-02-06 11:39:11,520 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-02-06 12:42:36] 2026-02-06 11:39:11,539 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,539 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,539 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,540 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 12:42:36] 2026-02-06 11:39:11,541 | INFO     | job 7000907560 has completed (purged errors)
[2026-02-06 12:42:36] 2026-02-06 11:39:11,542 | INFO     | overall cleanup function is called
[2026-02-06 12:42:36] 2026-02-06 11:39:12,549 | INFO     | --- collectZombieJob: --- 10, [2579554]
[2026-02-06 12:42:36] 2026-02-06 11:39:12,550 | INFO     | zombie collector waiting for pid 2579554
[2026-02-06 12:42:36] 2026-02-06 11:39:12,550 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 12:42:36] 2026-02-06 11:39:12,550 | INFO     | collected zombie processes
[2026-02-06 12:42:36] 2026-02-06 11:39:12,550 | INFO     | will attempt to kill all subprocesses of pid=2579554
[2026-02-06 12:42:36] 2026-02-06 11:39:12,837 | INFO     | process IDs to be killed: [2579554] (in reverse order)
[2026-02-06 12:42:36] 2026-02-06 11:39:12,907 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 12:42:36] 2026-02-06 11:39:12,908 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 12:42:36] 2026-02-06 11:39:12,917 | INFO     | did not find any defunct processes belonging to 2579554
[2026-02-06 12:42:36] 2026-02-06 11:39:12,924 | INFO     | did not find any defunct processes belonging to 2579554
[2026-02-06 12:42:36] 2026-02-06 11:39:12,925 | INFO     | ready for new job
[2026-02-06 12:42:36] 2026-02-06 11:39:12,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 12:42:36] 2026-02-06 11:39:12,928 | INFO     | **************************************
[2026-02-06 12:42:36] 2026-02-06 11:39:12,928 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-06 12:42:36] 2026-02-06 11:39:12,928 | INFO     | **************************************
[2026-02-06 12:42:36] 2026-02-06 11:39:12,928 | INFO     | 
[2026-02-06 12:42:36] 2026-02-06 11:39:12,930 | INFO     | architecture information:
[2026-02-06 12:42:36] 2026-02-06 11:39:12,931 | INFO     | executing command: cat /etc/os-release
[2026-02-06 12:42:36] 2026-02-06 11:39:12,943 | INFO     | cat /etc/os-release:
[2026-02-06 12:42:36] NAME="CentOS Linux"
[2026-02-06 12:42:36] VERSION="7 (Core)"
[2026-02-06 12:42:36] ID="centos"
[2026-02-06 12:42:36] ID_LIKE="rhel fedora"
[2026-02-06 12:42:36] VERSION_ID="7"
[2026-02-06 12:42:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 12:42:36] ANSI_COLOR="0;31"
[2026-02-06 12:42:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 12:42:36] HOME_URL="https://www.centos.org/"
[2026-02-06 12:42:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 12:42:36] 
[2026-02-06 12:42:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 12:42:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 12:42:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 12:42:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 12:42:36] 
[2026-02-06 12:42:36] 2026-02-06 11:39:12,944 | INFO     | **************************************
[2026-02-06 12:42:36] 2026-02-06 11:39:13,446 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-02-06 12:42:36] 2026-02-06 11:39:13,462 | INFO     | sufficient remaining disk space (1647182872576 B)
[2026-02-06 12:42:36] 2026-02-06 11:39:13,462 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 12:42:36] 2026-02-06 11:39:13,462 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 12:42:36] 2026-02-06 11:39:13,462 | INFO     | update_server=False
[2026-02-06 12:42:36] 2026-02-06 11:39:13,462 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 12:42:36] 2026-02-06 11:39:13,463 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 12:42:36] 2026-02-06 11:39:13,463 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 12:42:36] 2026-02-06 11:39:13,463 | INFO     | aborting loop
[2026-02-06 12:42:36] 2026-02-06 11:39:13,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 12:42:36] 2026-02-06 11:39:14,029 | INFO     | all job control threads have been joined
[2026-02-06 12:42:36] 2026-02-06 11:39:14,305 | INFO     | all payload control threads have been joined
[2026-02-06 12:42:36] 2026-02-06 11:39:14,363 | INFO     | all data control threads have been joined
[2026-02-06 12:42:36] 2026-02-06 11:39:14,467 | INFO     | [job] retrieve thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:14,467 | INFO     | [job] job monitor thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:14,468 | INFO     | [job] queue monitor thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:14,671 | INFO     | [payload] failed_post thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:14,697 | INFO     | [data] copytool_in thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,035 | INFO     | [job] control thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 12:42:36] 2026-02-06 11:39:15,090 | INFO     | [payload] validate_post thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,310 | INFO     | [payload] control thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,333 | INFO     | [job] validate thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,364 | INFO     | [data] control thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,397 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,477 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,675 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,718 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:15,754 | INFO     | [data] copytool_out thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:19,069 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 12:42:36] 2026-02-06 11:39:44,329 | INFO     | PID=2574910 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-06 12:42:36] 2026-02-06 11:39:44,329 | INFO     | .. there are 2 such processes running
[2026-02-06 12:42:36] 2026-02-06 11:39:44,329 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 12:42:36] 2026-02-06 11:39:44,329 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 12:42:36] 2026-02-06 11:39:44,329 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 12:42:36] 2026-02-06 11:39:55,818 | INFO     | [monitor] cgroup control has ended
[2026-02-06 12:42:36] 2026-02-06 11:39:56,483 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23054320543552)>', '<ExcThread(monitor, started 23054075033344)>']
[2026-02-06 12:42:36] 2026-02-06 11:39:57,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 12:42:36] 2026-02-06 11:39:57,390 | INFO     | [monitor] control thread has ended
[2026-02-06 12:42:36] 2026-02-06 11:40:01,507 | INFO     | all workflow threads have been joined
[2026-02-06 12:42:36] 2026-02-06 11:40:01,507 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 12:42:36] 2026-02-06 11:40:01,507 | INFO     | traces error code: 0
[2026-02-06 12:42:36] 2026-02-06 11:40:01,507 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 12:42:36] 2026-02-06 11:40:01,644 [wrapper] ==== pilot stdout END ====
[2026-02-06 12:42:36] 2026-02-06 11:40:01,646 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 12:42:36] 2026-02-06 11:40:01,649 [wrapper] pilotpid: 2574910
[2026-02-06 12:42:36] 2026-02-06 11:40:01,652 [wrapper] Pilot exit status: 0
[2026-02-06 12:42:36] 2026-02-06 11:40:01,663 [wrapper] pandaids: 7000907560
[2026-02-06 12:42:36] 2026-02-06 11:40:01,724 [wrapper] cleanup supervisor_pilot 2663336 2574911
[2026-02-06 12:42:36] 2026-02-06 11:40:01,727 [wrapper] Test setup, not cleaning
[2026-02-06 12:42:36] 2026-02-06 11:40:01,729 [wrapper] apfmon messages muted
[2026-02-06 12:42:36] 2026-02-06 11:40:01,731 [wrapper] ==== wrapper stdout END ====
[2026-02-06 12:42:36] 2026-02-06 11:40:01,734 [wrapper] ==== wrapper stderr END ====
[2026-02-06 12:42:36]  *** Error codes and diagnostics ***
[2026-02-06 12:42:36]     "exeErrorCode": 0,
[2026-02-06 12:42:36]     "exeErrorDiag": "",
[2026-02-06 12:42:36]     "pilotErrorCode": 0,
[2026-02-06 12:42:36]     "pilotErrorDiag": "",
[2026-02-06 12:42:36]  *** Listing of results directory ***
[2026-02-06 12:42:36] total 676480
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:30 pilot3.tar.gz
[2026-02-06 12:42:36] -rwx------ 1 boinc boinc     36322 Feb  6 05:31 runpilot2-wrapper.sh
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc      5111 Feb  6 05:32 queuedata.json
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc       100 Feb  6 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 12:42:36] -rwxr-xr-x 1 boinc boinc      7986 Feb  6 07:07 run_atlas
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc       105 Feb  6 07:07 job.xml
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc      6425 Feb  6 09:11 init_data.xml
[2026-02-06 12:42:36] -rw-r--r-- 2 boinc boinc 499444911 Feb  6 09:11 EVNT.48317929._000327.pool.root.1
[2026-02-06 12:42:36] -rw-r--r-- 2 boinc boinc     15845 Feb  6 09:11 start_atlas.sh
[2026-02-06 12:42:36] drwxrwx--x 2 boinc boinc      4096 Feb  6 09:11 shared
[2026-02-06 12:42:36] -rw-r--r-- 2 boinc boinc    597948 Feb  6 09:11 input.tar.gz
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc         0 Feb  6 09:11 boinc_lockfile
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc      2512 Feb  6 09:11 pandaJob.out
[2026-02-06 12:42:36] -rw------- 1 boinc boinc   1007453 Feb  6 09:11 agis_schedconf.cvmfs.json
[2026-02-06 12:42:36] -rw------- 1 boinc boinc       453 Feb  6 09:11 workernode_map.json
[2026-02-06 12:42:36] drwx------ 5 boinc boinc      4096 Feb  6 09:11 pilot3
[2026-02-06 12:42:36] -rw------- 1 boinc boinc 185063732 Feb  6 12:38 HITS.48317931._017851.pool.root.1
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc       529 Feb  6 12:38 boinc_task_state.xml
[2026-02-06 12:42:36] -rw------- 1 boinc boinc      1036 Feb  6 12:39 memory_monitor_summary.json
[2026-02-06 12:42:36] -rw------- 1 boinc boinc   1513144 Feb  6 12:39 agis_ddmendpoints.agis.ALL.json
[2026-02-06 12:42:36] -rw------- 1 boinc boinc    378743 Feb  6 12:39 log.48317931._017851.job.log.tgz.1
[2026-02-06 12:42:36] -rw------- 1 boinc boinc        95 Feb  6 12:39 pilot_heartbeat.json
[2026-02-06 12:42:36] -rw------- 1 boinc boinc      6416 Feb  6 12:39 heartbeat.json
[2026-02-06 12:42:36] -rw------- 1 boinc boinc      4830 Feb  6 12:40 pilotlog.txt
[2026-02-06 12:42:36] -rw------- 1 boinc boinc   1759174 Feb  6 12:40 log.48317931._017851.job.log.1
[2026-02-06 12:42:36] -rw------- 1 boinc boinc       357 Feb  6 12:40 output.list
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc       620 Feb  6 12:40 runtime_log
[2026-02-06 12:42:36] -rw------- 1 boinc boinc   2150400 Feb  6 12:40 result.tar.gz
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc      9205 Feb  6 12:40 runtime_log.err
[2026-02-06 12:42:36] -rw------- 1 boinc boinc       665 Feb  6 12:40 E9ONDm7fS88n9Rq4apOajLDm4fhM0noT9bVooX4SDm24WKDmeoHLCo.diag
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc        27 Feb  6 12:42 wrapper_checkpoint.txt
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc      8192 Feb  6 12:42 boinc_mmap_file
[2026-02-06 12:42:36] -rw-r--r-- 1 boinc boinc     21158 Feb  6 12:42 stderr.txt
[2026-02-06 12:42:36] HITS file was successfully produced:
[2026-02-06 12:42:36] -rw------- 1 boinc boinc 185063732 Feb  6 12:38 shared/HITS.pool.root.1
[2026-02-06 12:42:36]  *** Contents of shared directory: ***
[2026-02-06 12:42:36] total 671176
[2026-02-06 12:42:36] -rw-r--r-- 2 boinc boinc 499444911 Feb  6 09:11 ATLAS.root_0
[2026-02-06 12:42:36] -rw-r--r-- 2 boinc boinc     15845 Feb  6 09:11 start_atlas.sh
[2026-02-06 12:42:36] -rw-r--r-- 2 boinc boinc    597948 Feb  6 09:11 input.tar.gz
[2026-02-06 12:42:36] -rw------- 1 boinc boinc 185063732 Feb  6 12:38 HITS.pool.root.1
[2026-02-06 12:42:36] -rw------- 1 boinc boinc   2150400 Feb  6 12:40 result.tar.gz
12:42:38 (2570926): run_atlas exited; CPU time 48769.737942
12:42:38 (2570926): called boinc_finish(0)

</stderr_txt>
]]>

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