Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:06 (346069): wrapper (7.7.26015): starting
00:03:06 (346069): wrapper: running run_atlas (--nthreads 8)
[2026-02-06 00:03:06] Arguments: --nthreads 8
[2026-02-06 00:03:06] Threads: 8
[2026-02-06 00:03:06] Checking for CVMFS
[2026-02-06 00:03:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-06 00:03:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-06 00:03:08] Running cvmfs_config stat atlas.cern.ch
[2026-02-06 00:03:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-06 00:03:10] 2.13.3.0 9277 133240 356232 155928 3 503 32764297 32935936 24316 16776704 0 664846630 99.735 458088619 32802 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-06 00:03:10] CVMFS is ok
[2026-02-06 00:03:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-06 00:03:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-06 00:03:10] Further information can be found at the LHC@home message board.
[2026-02-06 00:03:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-06 00:03:10] Checking for apptainer binary...
[2026-02-06 00:03:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-06 00:03:10] Running /usr/bin/apptainer --version
[2026-02-06 00:03:10] apptainer version 1.4.5-2.el9
[2026-02-06 00:03:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-06 00:03:12] c-5-2.aglt2.org
[2026-02-06 00:03:12] apptainer works
[2026-02-06 00:03:12] Set ATHENA_PROC_NUMBER=8
[2026-02-06 00:03:12] Set ATHENA_CORE_NUMBER=8
[2026-02-06 00:03:12] Starting ATLAS job with PandaID=7000922729
[2026-02-06 00:03:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-07 23:28:28]  *** The last 200 lines of the pilot log: ***
[2026-02-07 23:28:28] 2026-02-08 04:27:18,297 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-07 23:28:28] 2026-02-08 04:27:18,297 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-07 23:28:28] 2026-02-08 04:27:18,345 | INFO     | fitting pss+swap vs Time
[2026-02-07 23:28:28] 2026-02-08 04:27:18,349 | INFO     | sum of square deviations: 6748677814599.938
[2026-02-07 23:28:28] 2026-02-08 04:27:19,470 | INFO     | time since job start (170469s) is within the limit (349056.0s)
[2026-02-07 23:28:28] 2026-02-08 04:27:19,494 | INFO     | sum of deviations: 3230590151515.226
[2026-02-07 23:28:28] 2026-02-08 04:27:19,494 | INFO     | mean x: 1770439660.053725
[2026-02-07 23:28:28] 2026-02-08 04:27:19,494 | INFO     | mean y: 2497809.011819484
[2026-02-07 23:28:28] 2026-02-08 04:27:19,494 | INFO     | intersect: -845011153.0026288
[2026-02-07 23:28:28] 2026-02-08 04:27:19,523 | INFO     | chi2: 7.275875433961717
[2026-02-07 23:28:28] 2026-02-08 04:27:19,553 | INFO     | sum of square deviations: 6712485458688.398
[2026-02-07 23:28:28] 2026-02-08 04:27:20,863 | INFO     | monitor loop #7916: job 0:7000922729 is in state 'finished'
[2026-02-07 23:28:28] 2026-02-08 04:27:20,863 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 23:28:28] 2026-02-08 04:27:21,215 | INFO     | sum of deviations: 3581544400451.2446
[2026-02-07 23:28:28] 2026-02-08 04:27:21,215 | INFO     | mean x: 1770439507.5547183
[2026-02-07 23:28:28] 2026-02-08 04:27:21,215 | INFO     | mean y: 2499286.162181557
[2026-02-07 23:28:28] 2026-02-08 04:27:21,215 | INFO     | intersect: -942144503.9279435
[2026-02-07 23:28:28] 2026-02-08 04:27:21,222 | INFO     | chi2: 5.877973603431293
[2026-02-07 23:28:28] 2026-02-08 04:27:21,223 | INFO     | current chi2=5.877973603431293 (change=19.212833468882877 %)
[2026-02-07 23:28:28] 2026-02-08 04:27:21,223 | INFO     | right removable region: 2786
[2026-02-07 23:28:28] 2026-02-08 04:27:21,227 | INFO     | sum of square deviations: 6712484515628.409
[2026-02-07 23:28:28] 2026-02-08 04:27:21,497 | INFO     | time since job start (170471s) is within the limit (349056.0s)
[2026-02-07 23:28:28] 2026-02-08 04:27:21,713 | INFO     | sum of deviations: 2283220776066.28
[2026-02-07 23:28:28] 2026-02-08 04:27:21,714 | INFO     | mean x: 1770439812.5547183
[2026-02-07 23:28:28] 2026-02-08 04:27:21,714 | INFO     | mean y: 2501800.3555794763
[2026-02-07 23:28:28] 2026-02-08 04:27:21,714 | INFO     | intersect: -599705169.8636122
[2026-02-07 23:28:28] 2026-02-08 04:27:21,717 | INFO     | chi2: 3.240277082060334
[2026-02-07 23:28:28] 2026-02-08 04:27:21,718 | INFO     | current chi2=3.240277082060334 (change=55.465467881216846 %)
[2026-02-07 23:28:28] 2026-02-08 04:27:21,721 | INFO     | sum of square deviations: 6676421696905.925
[2026-02-07 23:28:28] 2026-02-08 04:27:22,914 | INFO     | sum of deviations: 1749831038563.711
[2026-02-07 23:28:28] 2026-02-08 04:27:22,915 | INFO     | mean x: 1770439965.0539181
[2026-02-07 23:28:28] 2026-02-08 04:27:22,915 | INFO     | mean y: 2504055.2419122932
[2026-02-07 23:28:28] 2026-02-08 04:27:22,915 | INFO     | intersect: -461512590.710919
[2026-02-07 23:28:28] 2026-02-08 04:27:22,918 | INFO     | chi2: 1.8935148682599867
[2026-02-07 23:28:28] 2026-02-08 04:27:22,919 | INFO     | current chi2=1.8935148682599867 (change=41.56318054578243 %)
[2026-02-07 23:28:28] 2026-02-08 04:27:22,922 | INFO     | sum of square deviations: 6640488106378.308
[2026-02-07 23:28:28] 2026-02-08 04:27:23,231 | INFO     | sum of deviations: 1465218533241.885
[2026-02-07 23:28:28] 2026-02-08 04:27:23,231 | INFO     | mean x: 1770440117.553475
[2026-02-07 23:28:28] 2026-02-08 04:27:23,231 | INFO     | mean y: 2505262.960388909
[2026-02-07 23:28:28] 2026-02-08 04:27:23,232 | INFO     | intersect: -388140971.2739035
[2026-02-07 23:28:28] 2026-02-08 04:27:23,235 | INFO     | chi2: 1.5455125917219854
[2026-02-07 23:28:28] 2026-02-08 04:27:23,235 | INFO     | current chi2=1.5455125917219854 (change=18.378639765199843 %)
[2026-02-07 23:28:28] 2026-02-08 04:27:23,236 | INFO     | left removable region: 30
[2026-02-07 23:28:28] 2026-02-08 04:27:23,239 | INFO     | sum of square deviations: 6490977983017.87
[2026-02-07 23:28:28] 2026-02-08 04:27:23,388 | INFO     | monitor loop #7917: job 0:7000922729 is in state 'finished'
[2026-02-07 23:28:28] 2026-02-08 04:27:23,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-07 23:28:28] 2026-02-08 04:27:24,481 | INFO     | sum of deviations: 1598924953681.2825
[2026-02-07 23:28:28] 2026-02-08 04:27:24,482 | INFO     | mean x: 1770440392.04717
[2026-02-07 23:28:28] 2026-02-08 04:27:24,482 | INFO     | mean y: 2507691.3055152395
[2026-02-07 23:28:28] 2026-02-08 04:27:24,482 | INFO     | intersect: -433605530.65512365
[2026-02-07 23:28:28] 2026-02-08 04:27:24,486 | INFO     | chi2: 0.025882975191196804
[2026-02-07 23:28:28] 2026-02-08 04:27:24,486 | INFO     | current memory leak: 0.25 B/s (using 2756 data points, chi2=0.03)
[2026-02-07 23:28:28] 2026-02-08 04:27:24,488 | INFO     | could have reported an average CPU frequency of 2599 MHz (97 samples)
[2026-02-07 23:28:28] 2026-02-08 04:27:24,488 | INFO     | ..............................
[2026-02-07 23:28:28] 2026-02-08 04:27:24,488 | INFO     | . Timing measurements:
[2026-02-07 23:28:28] 2026-02-08 04:27:24,489 | INFO     | . get job = 0 s
[2026-02-07 23:28:28] 2026-02-08 04:27:24,489 | INFO     | . initial setup = 65 s
[2026-02-07 23:28:28] 2026-02-08 04:27:24,489 | INFO     | . payload setup = 79 s
[2026-02-07 23:28:28] 2026-02-08 04:27:24,489 | INFO     | . stage-in = 1 s
[2026-02-07 23:28:28] 2026-02-08 04:27:24,489 | INFO     | . payload execution = 170347 s
[2026-02-07 23:28:28] 2026-02-08 04:27:24,489 | INFO     | . stage-out = 10 s
[2026-02-07 23:28:28] 2026-02-08 04:27:24,489 | INFO     | . log creation = 2 s
[2026-02-07 23:28:28] 2026-02-08 04:27:24,489 | INFO     | ..............................
[2026-02-07 23:28:28] 2026-02-08 04:27:25,188 | INFO     | 
[2026-02-07 23:28:28] 2026-02-08 04:27:25,188 | INFO     | job summary report
[2026-02-07 23:28:28] 2026-02-08 04:27:25,188 | INFO     | --------------------------------------------------
[2026-02-07 23:28:28] 2026-02-08 04:27:25,188 | INFO     | PanDA job id: 7000922729
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | task id: 48317931
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | errors: (none)
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | pilot state: finished 
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | transexitcode: 0
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | exeerrorcode: 0
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | exeerrordiag: 
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | exitcode: 0
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | exitmsg: OK
[2026-02-07 23:28:28] 2026-02-08 04:27:25,189 | INFO     | cpuconsumptiontime: 50842 s
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | nevents: 400
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | neventsw: 0
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | pid: 398013
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | pgrp: 398013
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | corecount: 8
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | event service: False
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | sizes: {0: 2281941, 1: 2282542, 2: 2282626, 4: 2282682, 6: 2283115, 7: 2283143, 18: 2283299, 170433: 2380075, 170434: 2380074, 170446: 2389128, 170448: 2389184, 17
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | --------------------------------------------------
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | 
[2026-02-07 23:28:28] 2026-02-08 04:27:25,190 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-07 23:28:28] 2026-02-08 04:27:25,319 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,320 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,320 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,320 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,320 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,320 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,320 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,320 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,320 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,321 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,321 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,321 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,321 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,321 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,321 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,321 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,321 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,322 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-07 23:28:28] 2026-02-08 04:27:25,322 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,422 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-07 23:28:28] 2026-02-08 04:27:25,422 | INFO     | job 7000922729 has completed (purged errors)
[2026-02-07 23:28:28] 2026-02-08 04:27:25,423 | INFO     | overall cleanup function is called
[2026-02-07 23:28:28] 2026-02-08 04:27:26,606 | INFO     | --- collectZombieJob: --- 10, [398013]
[2026-02-07 23:28:28] 2026-02-08 04:27:26,606 | INFO     | zombie collector waiting for pid 398013
[2026-02-07 23:28:28] 2026-02-08 04:27:26,606 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-07 23:28:28] 2026-02-08 04:27:26,606 | INFO     | collected zombie processes
[2026-02-07 23:28:28] 2026-02-08 04:27:26,606 | INFO     | will attempt to kill all subprocesses of pid=398013
[2026-02-07 23:28:28] 2026-02-08 04:27:27,258 | INFO     | PID=357262 has CPU usage=15.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-07 23:28:28] 2026-02-08 04:27:27,258 | INFO     | .. there are 36 such processes running
[2026-02-07 23:28:28] 2026-02-08 04:27:28,485 | INFO     | process IDs to be killed: [398013] (in reverse order)
[2026-02-07 23:28:28] 2026-02-08 04:27:29,719 | WARNING  | found no corresponding commands to process id(s)
[2026-02-07 23:28:28] 2026-02-08 04:27:29,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-07 23:28:28] 2026-02-08 04:27:29,878 | INFO     | did not find any defunct processes belonging to 398013
[2026-02-07 23:28:28] 2026-02-08 04:27:30,098 | INFO     | did not find any defunct processes belonging to 398013
[2026-02-07 23:28:28] 2026-02-08 04:27:30,099 | INFO     | ready for new job
[2026-02-07 23:28:28] 2026-02-08 04:27:30,099 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-07 23:28:28] 2026-02-08 04:27:30,245 | INFO     | **************************************
[2026-02-07 23:28:28] 2026-02-08 04:27:30,246 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-07 23:28:28] 2026-02-08 04:27:30,246 | INFO     | **************************************
[2026-02-07 23:28:28] 2026-02-08 04:27:30,246 | INFO     | 
[2026-02-07 23:28:28] 2026-02-08 04:27:30,247 | INFO     | architecture information:
[2026-02-07 23:28:28] 2026-02-08 04:27:30,299 | INFO     | executing command: cat /etc/os-release
[2026-02-07 23:28:28] 2026-02-08 04:27:30,406 | INFO     | cat /etc/os-release:
[2026-02-07 23:28:28] NAME="CentOS Linux"
[2026-02-07 23:28:28] VERSION="7 (Core)"
[2026-02-07 23:28:28] ID="centos"
[2026-02-07 23:28:28] ID_LIKE="rhel fedora"
[2026-02-07 23:28:28] VERSION_ID="7"
[2026-02-07 23:28:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-07 23:28:28] ANSI_COLOR="0;31"
[2026-02-07 23:28:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-07 23:28:28] HOME_URL="https://www.centos.org/"
[2026-02-07 23:28:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-07 23:28:28] 
[2026-02-07 23:28:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-07 23:28:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-07 23:28:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-07 23:28:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-07 23:28:28] 
[2026-02-07 23:28:28] 2026-02-08 04:27:30,407 | INFO     | **************************************
[2026-02-07 23:28:28] 2026-02-08 04:27:30,914 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-07 23:28:28] 2026-02-08 04:27:31,176 | INFO     | sufficient remaining disk space (73023881216 B)
[2026-02-07 23:28:28] 2026-02-08 04:27:31,177 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-07 23:28:28] 2026-02-08 04:27:31,177 | INFO     | current server update state: UPDATING_FINAL
[2026-02-07 23:28:28] 2026-02-08 04:27:31,177 | INFO     | update_server=False
[2026-02-07 23:28:28] 2026-02-08 04:27:31,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-07 23:28:28] 2026-02-08 04:27:31,178 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-07 23:28:28] 2026-02-08 04:27:31,292 | INFO     | all job control threads have been joined
[2026-02-07 23:28:28] 2026-02-08 04:27:31,623 | INFO     | all payload control threads have been joined
[2026-02-07 23:28:28] 2026-02-08 04:27:31,738 | INFO     | all data control threads have been joined
[2026-02-07 23:28:28] 2026-02-08 04:27:32,127 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-07 23:28:28] 2026-02-08 04:27:32,127 | INFO     | aborting loop
[2026-02-07 23:28:28] 2026-02-08 04:27:32,189 | INFO     | [job] retrieve thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:32,298 | INFO     | [job] control thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:32,414 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-07 23:28:28] 2026-02-08 04:27:32,631 | INFO     | [payload] control thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:32,733 | INFO     | [job] create_data_payload thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:32,744 | INFO     | [data] control thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,018 | INFO     | [payload] validate_pre thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,020 | INFO     | [job] validate thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,029 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,030 | INFO     | [payload] execute_payloads thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,043 | INFO     | [data] copytool_in thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,142 | INFO     | [job] job monitor thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,169 | INFO     | [payload] failed_post thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,185 | INFO     | [data] copytool_out thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,349 | INFO     | [payload] validate_post thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:33,829 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-07 23:28:28] 2026-02-08 04:27:34,847 | INFO     | [job] queue monitor thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:27:36,430 | INFO     | [data] queue_monitor thread has finished
[2026-02-07 23:28:28] 2026-02-08 04:28:01,082 | INFO     | PID=357262 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-07 23:28:28] 2026-02-08 04:28:01,083 | INFO     | .. there are 36 such processes running
[2026-02-07 23:28:28] 2026-02-08 04:28:01,083 | INFO     | found 0 job(s) in 20 queues
[2026-02-07 23:28:28] 2026-02-08 04:28:01,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-07 23:28:28] 2026-02-08 04:28:01,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-07 23:28:28] 2026-02-08 04:28:19,309 | INFO     | [monitor] cgroup control has ended
[2026-02-07 23:28:28] 2026-02-08 04:28:21,080 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140000404055872)>', '<ExcThread(monitor, started 140000054191872)>']
[2026-02-07 23:28:28] 2026-02-08 04:28:21,202 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-07 23:28:28] 2026-02-08 04:28:21,202 | INFO     | [monitor] control thread has ended
[2026-02-07 23:28:28] 2026-02-08 04:28:26,108 | INFO     | all workflow threads have been joined
[2026-02-07 23:28:28] 2026-02-08 04:28:26,108 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-07 23:28:28] 2026-02-08 04:28:26,108 | INFO     | traces error code: 0
[2026-02-07 23:28:28] 2026-02-08 04:28:26,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-07 23:28:28] 2026-02-08 04:28:26,370 [wrapper] ==== pilot stdout END ====
[2026-02-07 23:28:28] 2026-02-08 04:28:26,374 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-07 23:28:28] 2026-02-08 04:28:26,413 [wrapper] pilotpid: 357262
[2026-02-07 23:28:28] 2026-02-08 04:28:26,466 [wrapper] Pilot exit status: 0
[2026-02-07 23:28:28] 2026-02-08 04:28:26,637 [wrapper] pandaids: 7000922729
[2026-02-07 23:28:28] 2026-02-08 04:28:27,282 [wrapper] cleanup supervisor_pilot 1608139 357265
[2026-02-07 23:28:28] 2026-02-08 04:28:27,376 [wrapper] Test setup, not cleaning
[2026-02-07 23:28:28] 2026-02-08 04:28:27,448 [wrapper] apfmon messages muted
[2026-02-07 23:28:28] 2026-02-08 04:28:27,511 [wrapper] ==== wrapper stdout END ====
[2026-02-07 23:28:28] 2026-02-08 04:28:27,514 [wrapper] ==== wrapper stderr END ====
[2026-02-07 23:28:28]  *** Error codes and diagnostics ***
[2026-02-07 23:28:28]     "exeErrorCode": 0,
[2026-02-07 23:28:28]     "exeErrorDiag": "",
[2026-02-07 23:28:28]     "pilotErrorCode": 0,
[2026-02-07 23:28:28]     "pilotErrorDiag": "",
[2026-02-07 23:28:28]  *** Listing of results directory ***
[2026-02-07 23:28:28] total 706812
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas    584627 Feb  5 23:30 pilot3.tar.gz
[2026-02-07 23:28:28] -rwx------. 1 boincer umatlas     36322 Feb  5 23:31 runpilot2-wrapper.sh
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas      5111 Feb  5 23:32 queuedata.json
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas       100 Feb  6 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-07 23:28:28] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  6 00:03 run_atlas
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas       105 Feb  6 00:03 job.xml
[2026-02-07 23:28:28] -rw-r--r--. 2 boincer umatlas 497062039 Feb  6 00:03 EVNT.48317929._000331.pool.root.1
[2026-02-07 23:28:28] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 00:03 start_atlas.sh
[2026-02-07 23:28:28] drwxrwx--x. 2 boincer umatlas      4096 Feb  6 00:03 shared
[2026-02-07 23:28:28] -rw-r--r--. 2 boincer umatlas    597951 Feb  6 00:03 input.tar.gz
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas         0 Feb  6 00:03 boinc_lockfile
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas      2513 Feb  6 00:03 pandaJob.out
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas        57 Feb  6 00:03 setup.sh.local
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas       432 Feb  6 00:06 workernode_map.json
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas   1007461 Feb  6 00:06 agis_schedconf.cvmfs.json
[2026-02-07 23:28:28] drwx------. 5 boincer umatlas      4096 Feb  6 00:06 pilot3
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas      6659 Feb  7 23:21 init_data.xml
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas 182833300 Feb  7 23:24 HITS.48317931._018082.pool.root.1
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas       532 Feb  7 23:24 boinc_task_state.xml
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas      1056 Feb  7 23:26 memory_monitor_summary.json
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas   1513088 Feb  7 23:27 agis_ddmendpoints.agis.ALL.json
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas   2200796 Feb  7 23:27 log.48317931._018082.job.log.tgz.1
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas      6410 Feb  7 23:27 heartbeat.json
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas        95 Feb  7 23:27 pilot_heartbeat.json
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas      4819 Feb  7 23:28 pilotlog.txt
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas      8192 Feb  7 23:28 boinc_mmap_file
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas  17767737 Feb  7 23:28 log.48317931._018082.job.log.1
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas        28 Feb  7 23:28 wrapper_checkpoint.txt
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas       357 Feb  7 23:28 output.list
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas       620 Feb  7 23:28 runtime_log
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas  19988480 Feb  7 23:28 result.tar.gz
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas      9328 Feb  7 23:28 runtime_log.err
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas       660 Feb  7 23:28 1VULDm8fS88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmnVXKDmi3k8tm.diag
[2026-02-07 23:28:28] -rw-r--r--. 1 boincer umatlas     21343 Feb  7 23:28 stderr.txt
[2026-02-07 23:28:28] HITS file was successfully produced:
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas 182833300 Feb  7 23:24 shared/HITS.pool.root.1
[2026-02-07 23:28:28]  *** Contents of shared directory: ***
[2026-02-07 23:28:28] total 684092
[2026-02-07 23:28:28] -rw-r--r--. 2 boincer umatlas 497062039 Feb  6 00:03 ATLAS.root_0
[2026-02-07 23:28:28] -rw-r--r--. 2 boincer umatlas     15845 Feb  6 00:03 start_atlas.sh
[2026-02-07 23:28:28] -rw-r--r--. 2 boincer umatlas    597951 Feb  6 00:03 input.tar.gz
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas 182833300 Feb  7 23:24 HITS.pool.root.1
[2026-02-07 23:28:28] -rw-------. 1 boincer umatlas  19988480 Feb  7 23:28 result.tar.gz
23:28:29 (346069): run_atlas exited; CPU time 59040.030266
23:28:29 (346069): called boinc_finish(0)

</stderr_txt>
]]>

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