Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
21:30:33 (10689): wrapper (7.7.26015): starting
21:30:33 (10689): wrapper: running run_atlas (--nthreads 8)
[2026-02-05 21:30:33] Arguments: --nthreads 8
[2026-02-05 21:30:33] Threads: 8
[2026-02-05 21:30:33] Checking for CVMFS
[2026-02-05 21:30:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 21:30:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 21:30:35] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 21:30:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 21:30:35] 2.13.3.0 10900 0 24572 155928 3 1 6015986 20480001 0 130560 0 0 0.000 1336 1130 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-05 21:30:35] CVMFS is ok
[2026-02-05 21:30:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 21:30:36] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-05 21:30:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-05 21:30:36] Further information can be found at the LHC@home message board.
[2026-02-05 21:30:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 21:30:36] Checking for apptainer binary...
[2026-02-05 21:30:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 21:30:36] Running /usr/bin/apptainer --version
[2026-02-05 21:30:36] apptainer version 1.4.4
[2026-02-05 21:30:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 21:30:36] garage
[2026-02-05 21:30:36] apptainer works
[2026-02-05 21:30:36] Set ATHENA_PROC_NUMBER=8
[2026-02-05 21:30:36] Set ATHENA_CORE_NUMBER=8
[2026-02-05 21:30:36] Starting ATLAS job with PandaID=6990630986
[2026-02-05 21:30:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 22:11:33]  *** The last 200 lines of the pilot log: ***
[2026-02-05 22:11:33]  filetype=log
[2026-02-05 22:11:33]  guid=6c64ffed-7029-4c23-9666-cd158c8433e5
[2026-02-05 22:11:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-05 22:11:33]  is_altstaged=None
[2026-02-05 22:11:33]  is_tar=False
[2026-02-05 22:11:33]  lfn=log.48317872._011304.job.log.tgz.1
[2026-02-05 22:11:33]  mtime=0
[2026-02-05 22:11:33]  protocol_id=None
[2026-02-05 22:11:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-05 22:11:33]  replicas=None
[2026-02-05 22:11:33]  scope=mc23_13p6TeV
[2026-02-05 22:11:33]  status=None
[2026-02-05 22:11:33]  status_code=0
[2026-02-05 22:11:33]  storage_token=
[2026-02-05 22:11:33]  surl=/var/lib/boinc-client/slots/5/PanDA_Pilot-6990630986/log.48317872._011304.job.log.tgz.1
[2026-02-05 22:11:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/45/log.48317872._011304.job.log.tgz.1
[2026-02-05 22:11:33]  workdir=None
[2026-02-05 22:11:33] ]
[2026-02-05 22:11:33] 2026-02-06 05:10:58,509 | INFO     | transferring file log.48317872._011304.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6990630986/log.48317872._011304.job.log.tgz.1 to /var/lib/boinc
[2026-02-05 22:11:33] 2026-02-06 05:10:58,509 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6990630986/log.48317872._011304.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.483178
[2026-02-05 22:11:33] 2026-02-06 05:10:58,525 | INFO     | adding to output.list: log.48317872._011304.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/97/45/log.48317872._011304.job.log.tg
[2026-02-05 22:11:33] 2026-02-06 05:10:58,526 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-05 22:11:33] 2026-02-06 05:10:58,526 | INFO     | summary of transferred files:
[2026-02-05 22:11:33] 2026-02-06 05:10:58,526 | INFO     |  -- lfn=log.48317872._011304.job.log.tgz.1, status_code=0, status=transferred
[2026-02-05 22:11:33] 2026-02-06 05:10:58,526 | INFO     | stage-out finished correctly
[2026-02-05 22:11:33] 2026-02-06 05:10:58,699 | INFO     | PID=15124 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-05 22:11:33] 2026-02-06 05:10:59,699 | INFO     | time since job start (2393s) is within the limit (349056.0s)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,116 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-05 22:11:33] 2026-02-06 05:11:00,520 | INFO     | monitor loop #187: job 0:6990630986 is in state 'finished'
[2026-02-05 22:11:33] 2026-02-06 05:11:00,521 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,575 | INFO     | job 6990630986 has state=finished
[2026-02-05 22:11:33] 2026-02-06 05:11:00,575 | INFO     | preparing for final server update for job 6990630986 in state='finished'
[2026-02-05 22:11:33] 2026-02-06 05:11:00,575 | INFO     | reading metadata from: /var/lib/boinc-client/slots/5/PanDA_Pilot-6990630986/jobReport.json
[2026-02-05 22:11:33] 2026-02-06 05:11:00,576 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/5/workernode_map.json
[2026-02-05 22:11:33] 2026-02-06 05:11:00,576 | INFO     | this job has now completed (state=finished)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,576 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,576 | INFO     | log transfer has been attempted: DONE
[2026-02-05 22:11:33] 2026-02-06 05:11:00,576 | INFO     | job 6990630986 has finished - writing final server update
[2026-02-05 22:11:33] 2026-02-06 05:11:00,576 | INFO     | total number of processed events: 400 (read)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,579 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6990630986/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,579 | INFO     | extracted standard info from prmon json
[2026-02-05 22:11:33] 2026-02-06 05:11:00,579 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 22:11:33] 2026-02-06 05:11:00,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 22:11:33] 2026-02-06 05:11:00,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 22:11:33] 2026-02-06 05:11:00,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | fitting pss+swap vs Time
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | sum of square deviations: 10150888.0
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | sum of deviations: -574053310.0
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | mean x: 1770353537.5
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | mean y: 2933752.375
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | intersect: 100120017900.29233
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | chi2: 0.035965462449074656
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | current memory leak: -56.55 B/s (using 32 data points, chi2=0.04)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | could have reported an average CPU frequency of 4491 MHz (5 samples)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | ..............................
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | . Timing measurements:
[2026-02-05 22:11:33] 2026-02-06 05:11:00,580 | INFO     | . get job = 0 s
[2026-02-05 22:11:33] 2026-02-06 05:11:00,581 | INFO     | . initial setup = 8 s
[2026-02-05 22:11:33] 2026-02-06 05:11:00,581 | INFO     | . payload setup = 5 s
[2026-02-05 22:11:33] 2026-02-06 05:11:00,581 | INFO     | . stage-in = 0 s
[2026-02-05 22:11:33] 2026-02-06 05:11:00,581 | INFO     | . payload execution = 2370 s
[2026-02-05 22:11:33] 2026-02-06 05:11:00,581 | INFO     | . stage-out = 0 s
[2026-02-05 22:11:33] 2026-02-06 05:11:00,581 | INFO     | . log creation = 0 s
[2026-02-05 22:11:33] 2026-02-06 05:11:00,581 | INFO     | ..............................
[2026-02-05 22:11:33] 2026-02-06 05:11:00,886 | INFO     | 
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | job summary report
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | --------------------------------------------------
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | PanDA job id: 6990630986
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | task id: 48317872
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | errors: (none)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | pilot state: finished 
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | transexitcode: 0
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | exeerrorcode: 0
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | exeerrordiag: 
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | exitcode: 0
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | exitmsg: OK
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | cpuconsumptiontime: 17396 s
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | nevents: 400
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | neventsw: 0
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | pid: 19690
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | pgrp: 19690
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | corecount: 8
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | event service: False
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | sizes: {0: 2283092, 11: 2283092, 2379: 2308278, 2380: 2317290, 2382: 2317572}
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | --------------------------------------------------
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | 
[2026-02-05 22:11:33] 2026-02-06 05:11:00,887 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | job 6990630986 has completed (purged errors)
[2026-02-05 22:11:33] 2026-02-06 05:11:00,914 | INFO     | overall cleanup function is called
[2026-02-05 22:11:33] 2026-02-06 05:11:01,921 | INFO     | --- collectZombieJob: --- 10, [19690]
[2026-02-05 22:11:33] 2026-02-06 05:11:01,921 | INFO     | zombie collector waiting for pid 19690
[2026-02-05 22:11:33] 2026-02-06 05:11:01,921 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 22:11:33] 2026-02-06 05:11:01,921 | INFO     | collected zombie processes
[2026-02-05 22:11:33] 2026-02-06 05:11:01,921 | INFO     | will attempt to kill all subprocesses of pid=19690
[2026-02-05 22:11:33] 2026-02-06 05:11:01,990 | INFO     | process IDs to be killed: [19690] (in reverse order)
[2026-02-05 22:11:33] 2026-02-06 05:11:02,018 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 22:11:33] 2026-02-06 05:11:02,018 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 22:11:33] 2026-02-06 05:11:02,020 | INFO     | did not find any defunct processes belonging to 19690
[2026-02-05 22:11:33] 2026-02-06 05:11:02,022 | INFO     | did not find any defunct processes belonging to 19690
[2026-02-05 22:11:33] 2026-02-06 05:11:02,022 | INFO     | ready for new job
[2026-02-05 22:11:33] 2026-02-06 05:11:02,022 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 22:11:33] 2026-02-06 05:11:02,023 | INFO     | **************************************
[2026-02-05 22:11:33] 2026-02-06 05:11:02,023 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 22:11:33] 2026-02-06 05:11:02,023 | INFO     | **************************************
[2026-02-05 22:11:33] 2026-02-06 05:11:02,023 | INFO     | 
[2026-02-05 22:11:33] 2026-02-06 05:11:02,024 | INFO     | architecture information:
[2026-02-05 22:11:33] 2026-02-06 05:11:02,024 | INFO     | executing command: cat /etc/os-release
[2026-02-05 22:11:33] 2026-02-06 05:11:02,042 | INFO     | cat /etc/os-release:
[2026-02-05 22:11:33] NAME="CentOS Linux"
[2026-02-05 22:11:33] VERSION="7 (Core)"
[2026-02-05 22:11:33] ID="centos"
[2026-02-05 22:11:33] ID_LIKE="rhel fedora"
[2026-02-05 22:11:33] VERSION_ID="7"
[2026-02-05 22:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 22:11:33] ANSI_COLOR="0;31"
[2026-02-05 22:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 22:11:33] HOME_URL="https://www.centos.org/"
[2026-02-05 22:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 22:11:33] 
[2026-02-05 22:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 22:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 22:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 22:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 22:11:33] 
[2026-02-05 22:11:33] 2026-02-06 05:11:02,042 | INFO     | **************************************
[2026-02-05 22:11:33] 2026-02-06 05:11:02,545 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-02-05 22:11:33] 2026-02-06 05:11:02,561 | INFO     | sufficient remaining disk space (688695279616 B)
[2026-02-05 22:11:33] 2026-02-06 05:11:02,561 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 22:11:33] 2026-02-06 05:11:02,561 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 22:11:33] 2026-02-06 05:11:02,561 | INFO     | update_server=False
[2026-02-05 22:11:33] 2026-02-06 05:11:02,561 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 22:11:33] 2026-02-06 05:11:02,561 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 22:11:33] 2026-02-06 05:11:02,561 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 22:11:33] 2026-02-06 05:11:02,562 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 22:11:33] 2026-02-06 05:11:03,023 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-05 22:11:33] 2026-02-06 05:11:03,023 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-05 22:11:33] 2026-02-06 05:11:03,024 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 22:11:33] 2026-02-06 05:11:03,024 | INFO     | will abort loop
[2026-02-05 22:11:33] 2026-02-06 05:11:03,119 | INFO     | all data control threads have been joined
[2026-02-05 22:11:33] 2026-02-06 05:11:03,218 | INFO     | all payload control threads have been joined
[2026-02-05 22:11:33] 2026-02-06 05:11:03,566 | INFO     | [job] retrieve thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:03,567 | INFO     | [job] queue monitor thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:03,637 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:03,765 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:03,846 | INFO     | [data] copytool_in thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:04,017 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:04,029 | INFO     | [job] job monitor thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:04,124 | INFO     | [data] control thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:04,205 | INFO     | all job control threads have been joined
[2026-02-05 22:11:33] 2026-02-06 05:11:04,210 | INFO     | [payload] validate_post thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:04,223 | INFO     | [payload] control thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:04,442 | INFO     | [payload] failed_post thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:04,568 | INFO     | [data] copytool_out thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:04,844 | INFO     | [job] validate thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:05,010 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:05,210 | INFO     | [job] control thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:06,567 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 22:11:33] 2026-02-06 05:11:10,254 | INFO     | [monitor] cgroup control has ended
[2026-02-05 22:11:33] 2026-02-06 05:11:10,360 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139077996320576)>', '<ExcThread(monitor, started 139077215057664)>']
[2026-02-05 22:11:33] 2026-02-06 05:11:15,385 | INFO     | all workflow threads have been joined
[2026-02-05 22:11:33] 2026-02-06 05:11:15,385 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 22:11:33] 2026-02-06 05:11:15,385 | INFO     | traces error code: 0
[2026-02-05 22:11:33] 2026-02-06 05:11:15,385 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 22:11:33] 2026-02-06 05:11:32,861 | INFO     | PID=15124 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-05 22:11:33] 2026-02-06 05:11:32,861 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 22:11:33] 2026-02-06 05:11:32,861 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 22:11:33] 2026-02-06 05:11:32,861 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 22:11:33] 2026-02-06 05:11:32,861 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 22:11:33] 2026-02-06 05:11:32,861 | INFO     | [monitor] control thread has ended
[2026-02-05 22:11:33] 2026-02-06 05:11:32,908 [wrapper] ==== pilot stdout END ====
[2026-02-05 22:11:33] 2026-02-06 05:11:32,910 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 22:11:33] 2026-02-06 05:11:32,913 [wrapper] pilotpid: 15124
[2026-02-05 22:11:33] 2026-02-06 05:11:32,916 [wrapper] Pilot exit status: 0
[2026-02-05 22:11:33] 2026-02-06 05:11:32,927 [wrapper] pandaids: 6990630986
[2026-02-05 22:11:33] 2026-02-06 05:11:32,953 [wrapper] cleanup supervisor_pilot   24638 15125
[2026-02-05 22:11:33] 2026-02-06 05:11:32,959 [wrapper] Test setup, not cleaning
[2026-02-05 22:11:33] 2026-02-06 05:11:32,962 [wrapper] apfmon messages muted
[2026-02-05 22:11:33] 2026-02-06 05:11:32,965 [wrapper] ==== wrapper stdout END ====
[2026-02-05 22:11:33] 2026-02-06 05:11:32,967 [wrapper] ==== wrapper stderr END ====
[2026-02-05 22:11:33]  *** Error codes and diagnostics ***
[2026-02-05 22:11:33]     "exeErrorCode": 0,
[2026-02-05 22:11:33]     "exeErrorDiag": "",
[2026-02-05 22:11:33]     "pilotErrorCode": 0,
[2026-02-05 22:11:33]     "pilotErrorDiag": "",
[2026-02-05 22:11:33]  *** Listing of results directory ***
[2026-02-05 22:11:33] total 665728
[2026-02-05 22:11:33] -rwx------ 1 boinc boinc     36322 Jan 28 22:11 runpilot2-wrapper.sh
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc    584422 Jan 28 22:13 pilot3.tar.gz
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc      5111 Jan 28 22:16 queuedata.json
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc       100 Feb  5 21:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 22:11:33] -rwxr-xr-x 1 boinc boinc      7986 Feb  5 21:30 run_atlas
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc       105 Feb  5 21:30 job.xml
[2026-02-05 22:11:33] -rw-r--r-- 2 boinc boinc 492962014 Feb  5 21:30 EVNT.48317869._000209.pool.root.1
[2026-02-05 22:11:33] -rw-r--r-- 2 boinc boinc     15845 Feb  5 21:30 start_atlas.sh
[2026-02-05 22:11:33] drwxrwx--x 2 boinc boinc      4096 Feb  5 21:30 shared
[2026-02-05 22:11:33] -rw-r--r-- 2 boinc boinc    597750 Feb  5 21:30 input.tar.gz
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc      9470 Feb  5 21:30 init_data.xml
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc         0 Feb  5 21:30 boinc_setup_complete
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc         0 Feb  5 21:30 boinc_lockfile
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc      2518 Feb  5 21:30 pandaJob.out
[2026-02-05 22:11:33] -rw------- 1 boinc boinc   1007461 Feb  5 21:30 agis_schedconf.cvmfs.json
[2026-02-05 22:11:33] -rw------- 1 boinc boinc   1513144 Feb  5 21:31 agis_ddmendpoints.agis.ALL.json
[2026-02-05 22:11:33] -rw------- 1 boinc boinc       415 Feb  5 21:31 workernode_map.json
[2026-02-05 22:11:33] drwx------ 5 boinc boinc      4096 Feb  5 21:31 pilot3
[2026-02-05 22:11:33] -rw------- 1 boinc boinc 183424632 Feb  5 22:10 HITS.48317872._011304.pool.root.1
[2026-02-05 22:11:33] -rw------- 1 boinc boinc      1019 Feb  5 22:10 memory_monitor_summary.json
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc       530 Feb  5 22:10 boinc_task_state.xml
[2026-02-05 22:11:33] -rw------- 1 boinc boinc    307408 Feb  5 22:10 log.48317872._011304.job.log.tgz.1
[2026-02-05 22:11:33] -rw------- 1 boinc boinc      6266 Feb  5 22:11 heartbeat.json
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc        27 Feb  5 22:11 wrapper_checkpoint.txt
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc      8192 Feb  5 22:11 boinc_mmap_file
[2026-02-05 22:11:33] -rw------- 1 boinc boinc       745 Feb  5 22:11 pilotlog.txt
[2026-02-05 22:11:33] -rw------- 1 boinc boinc        95 Feb  5 22:11 pilot_heartbeat.json
[2026-02-05 22:11:33] -rw------- 1 boinc boinc    379079 Feb  5 22:11 log.48317872._011304.job.log.1
[2026-02-05 22:11:33] -rw------- 1 boinc boinc       357 Feb  5 22:11 output.list
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc       620 Feb  5 22:11 runtime_log
[2026-02-05 22:11:33] -rw------- 1 boinc boinc    706560 Feb  5 22:11 result.tar.gz
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc      8913 Feb  5 22:11 runtime_log.err
[2026-02-05 22:11:33] -rw------- 1 boinc boinc       653 Feb  5 22:11 IMbNDm8UZ58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm23HKDmgjRepn.diag
[2026-02-05 22:11:33] -rw-r--r-- 1 boinc boinc     21442 Feb  5 22:11 stderr.txt
[2026-02-05 22:11:33] HITS file was successfully produced:
[2026-02-05 22:11:33] -rw------- 1 boinc boinc 183424632 Feb  5 22:10 shared/HITS.pool.root.1
[2026-02-05 22:11:33]  *** Contents of shared directory: ***
[2026-02-05 22:11:33] total 661840
[2026-02-05 22:11:33] -rw-r--r-- 2 boinc boinc 492962014 Feb  5 21:30 ATLAS.root_0
[2026-02-05 22:11:33] -rw-r--r-- 2 boinc boinc     15845 Feb  5 21:30 start_atlas.sh
[2026-02-05 22:11:33] -rw-r--r-- 2 boinc boinc    597750 Feb  5 21:30 input.tar.gz
[2026-02-05 22:11:33] -rw------- 1 boinc boinc 183424632 Feb  5 22:10 HITS.pool.root.1
[2026-02-05 22:11:33] -rw------- 1 boinc boinc    706560 Feb  5 22:11 result.tar.gz
22:11:34 (10689): run_atlas exited; CPU time 17409.128315
22:11:34 (10689): called boinc_finish(0)

</stderr_txt>
]]>

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