Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:35:23 (2373324): wrapper (7.7.26015): starting
22:35:23 (2373324): wrapper: running run_atlas (--nthreads 4)
[2026-02-11 22:35:23] Arguments: --nthreads 4
[2026-02-11 22:35:23] Threads: 4
[2026-02-11 22:35:23] Checking for CVMFS
[2026-02-11 22:35:23] No cvmfs_config command found, will try listing directly
[2026-02-11 22:35:23] CVMFS is ok
[2026-02-11 22:35:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-11 22:35:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-11 22:35:23] Further information can be found at the LHC@home message board.
[2026-02-11 22:35:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-11 22:35:23] Checking for apptainer binary...
[2026-02-11 22:35:23] which: no apptainer in ((null))
[2026-02-11 22:35:23] apptainer is not installed, using version from CVMFS
[2026-02-11 22:35:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-11 22:35:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot96/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-02-11 22:35:24] apptainer works
[2026-02-11 22:35:24] Set ATHENA_PROC_NUMBER=4
[2026-02-11 22:35:24] Set ATHENA_CORE_NUMBER=4
[2026-02-11 22:35:24] Starting ATLAS job with PandaID=7000905417
[2026-02-11 22:35:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot96/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-12 01:45:07]  *** The last 200 lines of the pilot log: ***
[2026-02-12 01:45:07] 2026-02-12 00:39:55,276 | INFO     | job 7000905417 has state=finished
[2026-02-12 01:45:07] 2026-02-12 00:39:55,277 | INFO     | preparing for final server update for job 7000905417 in state='finished'
[2026-02-12 01:45:07] 2026-02-12 00:39:55,277 | INFO     | reading metadata from: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7000905417/jobReport.json
[2026-02-12 01:45:07] 2026-02-12 00:39:55,279 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot96/slots/0/workernode_map.json
[2026-02-12 01:45:07] 2026-02-12 00:39:55,279 | INFO     | this job has now completed (state=finished)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,280 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,280 | INFO     | log transfer has been attempted: DONE
[2026-02-12 01:45:07] 2026-02-12 00:39:55,280 | INFO     | job 7000905417 has finished - writing final server update
[2026-02-12 01:45:07] 2026-02-12 00:39:55,280 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_1672209/.job.ad'
[2026-02-12 01:45:07] 2026-02-12 00:39:55,280 | INFO     | total number of processed events: 400 (read)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,312 | INFO     | using path: /scratch/boinc/var/slot96/slots/0/PanDA_Pilot-7000905417/memory_monitor_summary.json (trf name=prmon)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,313 | INFO     | extracted standard info from prmon json
[2026-02-12 01:45:07] 2026-02-12 00:39:55,313 | INFO     | extracted standard memory fields from prmon json
[2026-02-12 01:45:07] 2026-02-12 00:39:55,313 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-12 01:45:07] 2026-02-12 00:39:55,313 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-12 01:45:07] 2026-02-12 00:39:55,313 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-12 01:45:07] 2026-02-12 00:39:55,316 | INFO     | fitting pss+swap vs Time
[2026-02-12 01:45:07] 2026-02-12 00:39:55,317 | INFO     | sum of square deviations: 1808390088.644441
[2026-02-12 01:45:07] 2026-02-12 00:39:55,325 | INFO     | sum of deviations: -9889787670.500025
[2026-02-12 01:45:07] 2026-02-12 00:39:55,325 | INFO     | mean x: 1770851280.5444446
[2026-02-12 01:45:07] 2026-02-12 00:39:55,325 | INFO     | mean y: 2357693.25
[2026-02-12 01:45:07] 2026-02-12 00:39:55,325 | INFO     | intersect: 9686851802.452696
[2026-02-12 01:45:07] 2026-02-12 00:39:55,326 | INFO     | chi2: 1.5001306384818083
[2026-02-12 01:45:07] 2026-02-12 00:39:55,326 | INFO     | sum of square deviations: 1661840943.6342902
[2026-02-12 01:45:07] 2026-02-12 00:39:55,327 | INFO     | sum of deviations: -9381104823.76001
[2026-02-12 01:45:07] 2026-02-12 00:39:55,327 | INFO     | mean x: 1770851128.0457144
[2026-02-12 01:45:07] 2026-02-12 00:39:55,327 | INFO     | mean y: 2358222.72
[2026-02-12 01:45:07] 2026-02-12 00:39:55,327 | INFO     | intersect: 9998826370.351768
[2026-02-12 01:45:07] 2026-02-12 00:39:55,328 | INFO     | chi2: 1.499255848359667
[2026-02-12 01:45:07] 2026-02-12 00:39:55,328 | INFO     | current chi2=1.499255848359667 (change=0.058314262751584994 %)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,328 | INFO     | right removable region: 174
[2026-02-12 01:45:07] 2026-02-12 00:39:55,328 | INFO     | sum of square deviations: 1661836063.6342902
[2026-02-12 01:45:07] 2026-02-12 00:39:55,329 | INFO     | sum of deviations: -30862717705.87429
[2026-02-12 01:45:07] 2026-02-12 00:39:55,329 | INFO     | mean x: 1770851433.0457144
[2026-02-12 01:45:07] 2026-02-12 00:39:55,330 | INFO     | mean y: 2379132.234285714
[2026-02-12 01:45:07] 2026-02-12 00:39:55,330 | INFO     | intersect: 32889671129.984573
[2026-02-12 01:45:07] 2026-02-12 00:39:55,330 | INFO     | chi2: 0.14340226250737007
[2026-02-12 01:45:07] 2026-02-12 00:39:55,330 | INFO     | current chi2=0.14340226250737007 (change=90.4406817093944 %)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,330 | INFO     | sum of square deviations: 1523421726.1235297
[2026-02-12 01:45:07] 2026-02-12 00:39:55,331 | INFO     | sum of deviations: -24524842175.247063
[2026-02-12 01:45:07] 2026-02-12 00:39:55,332 | INFO     | mean x: 1770851585.5470588
[2026-02-12 01:45:07] 2026-02-12 00:39:55,332 | INFO     | mean y: 2372125.905882353
[2026-02-12 01:45:07] 2026-02-12 00:39:55,332 | INFO     | intersect: 28510469986.52813
[2026-02-12 01:45:07] 2026-02-12 00:39:55,332 | INFO     | chi2: 0.1225180127042345
[2026-02-12 01:45:07] 2026-02-12 00:39:55,332 | INFO     | current chi2=0.1225180127042345 (change=14.56340328107601 %)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,332 | INFO     | left removable region: 20
[2026-02-12 01:45:07] 2026-02-12 00:39:55,333 | INFO     | sum of square deviations: 1132491514.0844216
[2026-02-12 01:45:07] 2026-02-12 00:39:55,334 | INFO     | sum of deviations: -11531196410.837656
[2026-02-12 01:45:07] 2026-02-12 00:39:55,334 | INFO     | mean x: 1770851707.551948
[2026-02-12 01:45:07] 2026-02-12 00:39:55,334 | INFO     | mean y: 2357937.2922077924
[2026-02-12 01:45:07] 2026-02-12 00:39:55,334 | INFO     | intersect: 18033432431.265457
[2026-02-12 01:45:07] 2026-02-12 00:39:55,334 | INFO     | chi2: 0.05848854191526693
[2026-02-12 01:45:07] 2026-02-12 00:39:55,334 | INFO     | current memory leak: -10.18 B/s (using 154 data points, chi2=0.06)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,335 | INFO     | could have reported an average CPU frequency of 2660 MHz (10 samples)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,335 | INFO     | ..............................
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | . Timing measurements:
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | . get job = 0 s
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | . initial setup = 18 s
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | . payload setup = 23 s
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | . stage-in = 0 s
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | . payload execution = 10988 s
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | . stage-out = 1 s
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | . log creation = 0 s
[2026-02-12 01:45:07] 2026-02-12 00:39:55,336 | INFO     | ..............................
[2026-02-12 01:45:07] 2026-02-12 00:39:55,445 | INFO     | 
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | job summary report
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | --------------------------------------------------
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | PanDA job id: 7000905417
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | task id: 48317931
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | errors: (none)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | pilot state: finished 
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | transexitcode: 0
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | exeerrorcode: 0
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | exeerrordiag: 
[2026-02-12 01:45:07] 2026-02-12 00:39:55,446 | INFO     | exitcode: 0
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | exitmsg: OK
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | cpuconsumptiontime: 39895 s
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | nevents: 400
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | neventsw: 0
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | pid: 2384660
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | pgrp: 2384660
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | corecount: 4
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | event service: False
[2026-02-12 01:45:07] 2026-02-12 00:39:55,447 | INFO     | sizes: {0: 2281738, 1: 2282199, 11015: 2311418, 11016: 2311417, 11018: 2320493, 11020: 2320871}
[2026-02-12 01:45:07] 2026-02-12 00:39:55,448 | INFO     | --------------------------------------------------
[2026-02-12 01:45:07] 2026-02-12 00:39:55,448 | INFO     | 
[2026-02-12 01:45:07] 2026-02-12 00:39:55,448 | INFO     | executing command: ls -lF /scratch/boinc/var/slot96/slots/0
[2026-02-12 01:45:07] 2026-02-12 00:39:55,484 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,485 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-12 01:45:07] 2026-02-12 00:39:55,486 | INFO     | job 7000905417 has completed (purged errors)
[2026-02-12 01:45:07] 2026-02-12 00:39:55,487 | INFO     | overall cleanup function is called
[2026-02-12 01:45:07] 2026-02-12 00:39:56,496 | INFO     | --- collectZombieJob: --- 10, [2384660]
[2026-02-12 01:45:07] 2026-02-12 00:39:56,497 | INFO     | zombie collector waiting for pid 2384660
[2026-02-12 01:45:07] 2026-02-12 00:39:56,497 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-12 01:45:07] 2026-02-12 00:39:56,497 | INFO     | collected zombie processes
[2026-02-12 01:45:07] 2026-02-12 00:39:56,497 | INFO     | will attempt to kill all subprocesses of pid=2384660
[2026-02-12 01:45:07] 2026-02-12 00:39:57,482 | INFO     | process IDs to be killed: [2384660] (in reverse order)
[2026-02-12 01:45:07] 2026-02-12 00:39:57,884 | WARNING  | found no corresponding commands to process id(s)
[2026-02-12 01:45:07] 2026-02-12 00:39:57,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-12 01:45:07] 2026-02-12 00:39:58,017 | INFO     | did not find any defunct processes belonging to 2384660
[2026-02-12 01:45:07] 2026-02-12 00:39:58,215 | INFO     | did not find any defunct processes belonging to 2384660
[2026-02-12 01:45:07] 2026-02-12 00:39:58,216 | INFO     | ready for new job
[2026-02-12 01:45:07] 2026-02-12 00:39:58,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-12 01:45:07] 2026-02-12 00:39:58,225 | INFO     | **************************************
[2026-02-12 01:45:07] 2026-02-12 00:39:58,225 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-12 01:45:07] 2026-02-12 00:39:58,225 | INFO     | **************************************
[2026-02-12 01:45:07] 2026-02-12 00:39:58,225 | INFO     | 
[2026-02-12 01:45:07] 2026-02-12 00:39:58,234 | INFO     | architecture information:
[2026-02-12 01:45:07] 2026-02-12 00:39:58,234 | INFO     | executing command: cat /etc/os-release
[2026-02-12 01:45:07] 2026-02-12 00:39:58,258 | INFO     | cat /etc/os-release:
[2026-02-12 01:45:07] NAME="CentOS Linux"
[2026-02-12 01:45:07] VERSION="7 (Core)"
[2026-02-12 01:45:07] ID="centos"
[2026-02-12 01:45:07] ID_LIKE="rhel fedora"
[2026-02-12 01:45:07] VERSION_ID="7"
[2026-02-12 01:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-12 01:45:07] ANSI_COLOR="0;31"
[2026-02-12 01:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-12 01:45:07] HOME_URL="https://www.centos.org/"
[2026-02-12 01:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-12 01:45:07] 
[2026-02-12 01:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-12 01:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-12 01:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-12 01:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-12 01:45:07] 
[2026-02-12 01:45:07] 2026-02-12 00:39:58,259 | INFO     | **************************************
[2026-02-12 01:45:07] 2026-02-12 00:39:58,762 | INFO     | executing command: df -mP /scratch/boinc/var/slot96/slots/0
[2026-02-12 01:45:07] 2026-02-12 00:39:58,791 | INFO     | sufficient remaining disk space (3158532161536 B)
[2026-02-12 01:45:07] 2026-02-12 00:39:58,792 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-12 01:45:07] 2026-02-12 00:39:58,792 | INFO     | current server update state: UPDATING_FINAL
[2026-02-12 01:45:07] 2026-02-12 00:39:58,792 | INFO     | update_server=False
[2026-02-12 01:45:07] 2026-02-12 00:39:58,792 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-12 01:45:07] 2026-02-12 00:39:58,792 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-12 01:45:07] 2026-02-12 00:39:59,027 | INFO     | all data control threads have been joined
[2026-02-12 01:45:07] 2026-02-12 00:39:59,273 | INFO     | all job control threads have been joined
[2026-02-12 01:45:07] 2026-02-12 00:39:59,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:45:07] 2026-02-12 00:39:59,480 | INFO     | aborting loop
[2026-02-12 01:45:07] 2026-02-12 00:39:59,638 | INFO     | all payload control threads have been joined
[2026-02-12 01:45:07] 2026-02-12 00:39:59,797 | INFO     | [job] retrieve thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:39:59,803 | INFO     | [payload] validate_post thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:39:59,830 | INFO     | [job] validate thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:39:59,886 | INFO     | [data] copytool_in thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:00,032 | INFO     | [data] control thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:00,278 | INFO     | [job] control thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:00,348 | INFO     | [payload] validate_pre thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:00,413 | INFO     | [payload] failed_post thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:00,455 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-12 01:45:07] 2026-02-12 00:40:00,484 | INFO     | [job] job monitor thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:00,488 | INFO     | [payload] execute_payloads thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:00,643 | INFO     | [payload] control thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:00,798 | INFO     | [data] copytool_out thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:01,082 | INFO     | [job] create_data_payload thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:01,281 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-12 01:45:07] 2026-02-12 00:40:01,461 | INFO     | [job] queue monitor thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:05,288 | INFO     | [data] queue_monitor thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:09,835 | INFO     | job.realtimelogging is not enabled
[2026-02-12 01:45:07] 2026-02-12 00:40:10,840 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-12 01:45:07] 2026-02-12 00:40:28,344 | INFO     | PID=2378975 has CPU usage=14.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-12 01:45:07] 2026-02-12 00:40:28,344 | INFO     | .. there are 9 such processes running
[2026-02-12 01:45:07] 2026-02-12 00:40:28,345 | INFO     | found 0 job(s) in 20 queues
[2026-02-12 01:45:07] 2026-02-12 00:40:28,345 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-12 01:45:07] 2026-02-12 00:40:28,345 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-12 01:45:07] 2026-02-12 00:40:32,103 | INFO     | [monitor] cgroup control has ended
[2026-02-12 01:45:07] 2026-02-12 00:40:33,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23330317952832)>', '<ExcThread(monitor, started 23330068621056)>']
[2026-02-12 01:45:07] 2026-02-12 00:40:34,375 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-12 01:45:07] 2026-02-12 00:40:34,376 | INFO     | [monitor] control thread has ended
[2026-02-12 01:45:07] 2026-02-12 00:40:38,414 | INFO     | all workflow threads have been joined
[2026-02-12 01:45:07] 2026-02-12 00:40:38,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-12 01:45:07] 2026-02-12 00:40:38,418 | INFO     | traces error code: 0
[2026-02-12 01:45:07] 2026-02-12 00:40:38,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-12 01:45:07] 2026-02-12 00:40:38,600 [wrapper] ==== pilot stdout END ====
[2026-02-12 01:45:07] 2026-02-12 00:40:38,605 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-12 01:45:07] 2026-02-12 00:40:38,609 [wrapper] pilotpid: 2378975
[2026-02-12 01:45:07] 2026-02-12 00:40:38,615 [wrapper] Pilot exit status: 0
[2026-02-12 01:45:07] 2026-02-12 00:40:38,687 [wrapper] pandaids: 7000905417
[2026-02-12 01:45:07] 2026-02-12 00:40:38,937 [wrapper] cleanup supervisor_pilot 2597737 2378976
[2026-02-12 01:45:07] 2026-02-12 00:40:38,945 [wrapper] Test setup, not cleaning
[2026-02-12 01:45:07] 2026-02-12 00:40:38,956 [wrapper] apfmon messages muted
[2026-02-12 01:45:07] 2026-02-12 00:40:38,974 [wrapper] ==== wrapper stdout END ====
[2026-02-12 01:45:07] 2026-02-12 00:40:38,979 [wrapper] ==== wrapper stderr END ====
[2026-02-12 01:45:07]  *** Error codes and diagnostics ***
[2026-02-12 01:45:07]     "exeErrorCode": 0,
[2026-02-12 01:45:07]     "exeErrorDiag": "",
[2026-02-12 01:45:07]     "pilotErrorCode": 0,
[2026-02-12 01:45:07]     "pilotErrorDiag": "",
[2026-02-12 01:45:07]  *** Listing of results directory ***
[2026-02-12 01:45:07] total 671144
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc    584627 Feb  6 05:07 pilot3.tar.gz
[2026-02-12 01:45:07] -rwx------ 1 boinc boinc     36322 Feb  6 05:11 runpilot2-wrapper.sh
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc      5111 Feb  6 05:14 queuedata.json
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc       100 Feb 11 22:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-12 01:45:07] -rwxr-xr-x 1 boinc boinc      7986 Feb 11 22:35 run_atlas
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc       105 Feb 11 22:35 job.xml
[2026-02-12 01:45:07] -rw-r--r-- 2 boinc boinc 498379200 Feb 11 22:35 EVNT.48317929._000307.pool.root.1
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc      6698 Feb 11 22:35 init_data.xml
[2026-02-12 01:45:07] -rw-r--r-- 2 boinc boinc    597948 Feb 11 22:35 input.tar.gz
[2026-02-12 01:45:07] -rw-r--r-- 2 boinc boinc     15845 Feb 11 22:35 start_atlas.sh
[2026-02-12 01:45:07] drwxrwx--x 2 boinc boinc      4096 Feb 11 22:35 shared
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc         0 Feb 11 22:35 boinc_lockfile
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc      2513 Feb 11 22:35 pandaJob.out
[2026-02-12 01:45:07] -rw------- 1 boinc boinc   1005065 Feb 11 22:35 agis_schedconf.cvmfs.json
[2026-02-12 01:45:07] -rw------- 1 boinc boinc       443 Feb 11 22:36 workernode_map.json
[2026-02-12 01:45:07] drwx------ 5 boinc boinc      4096 Feb 11 22:36 pilot3
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc       530 Feb 12 01:39 boinc_task_state.xml
[2026-02-12 01:45:07] -rw------- 1 boinc boinc 181245362 Feb 12 01:39 HITS.48317931._016883.pool.root.1
[2026-02-12 01:45:07] -rw------- 1 boinc boinc        95 Feb 12 01:39 pilot_heartbeat.json
[2026-02-12 01:45:07] -rw------- 1 boinc boinc      1029 Feb 12 01:39 memory_monitor_summary.json
[2026-02-12 01:45:07] -rw------- 1 boinc boinc   1512955 Feb 12 01:39 agis_ddmendpoints.agis.ALL.json
[2026-02-12 01:45:07] -rw------- 1 boinc boinc    385970 Feb 12 01:39 log.48317931._016883.job.log.tgz.1
[2026-02-12 01:45:07] -rw------- 1 boinc boinc      6360 Feb 12 01:39 heartbeat.json
[2026-02-12 01:45:07] -rw------- 1 boinc boinc      4903 Feb 12 01:40 pilotlog.txt
[2026-02-12 01:45:07] -rw------- 1 boinc boinc   1456096 Feb 12 01:40 log.48317931._016883.job.log.1
[2026-02-12 01:45:07] -rw------- 1 boinc boinc       357 Feb 12 01:40 output.list
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc       620 Feb 12 01:40 runtime_log
[2026-02-12 01:45:07] -rw------- 1 boinc boinc   1863680 Feb 12 01:40 result.tar.gz
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc      9205 Feb 12 01:40 runtime_log.err
[2026-02-12 01:45:07] -rw------- 1 boinc boinc       666 Feb 12 01:40 5CcLDmiMS88nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYOXKDmAKa5To.diag
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc        26 Feb 12 01:44 wrapper_checkpoint.txt
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc      8192 Feb 12 01:45 boinc_mmap_file
[2026-02-12 01:45:07] -rw-r--r-- 1 boinc boinc     21147 Feb 12 01:45 stderr.txt
[2026-02-12 01:45:07] HITS file was successfully produced:
[2026-02-12 01:45:07] -rw------- 1 boinc boinc 181245362 Feb 12 01:39 shared/HITS.pool.root.1
[2026-02-12 01:45:07]  *** Contents of shared directory: ***
[2026-02-12 01:45:07] total 666128
[2026-02-12 01:45:07] -rw-r--r-- 2 boinc boinc 498379200 Feb 11 22:35 ATLAS.root_0
[2026-02-12 01:45:07] -rw-r--r-- 2 boinc boinc    597948 Feb 11 22:35 input.tar.gz
[2026-02-12 01:45:07] -rw-r--r-- 2 boinc boinc     15845 Feb 11 22:35 start_atlas.sh
[2026-02-12 01:45:07] -rw------- 1 boinc boinc 181245362 Feb 12 01:39 HITS.pool.root.1
[2026-02-12 01:45:07] -rw------- 1 boinc boinc   1863680 Feb 12 01:40 result.tar.gz
01:45:09 (2373324): run_atlas exited; CPU time 40727.701866
01:45:09 (2373324): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN