Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:22:25 (531759): wrapper (7.7.26015): starting
22:22:25 (531759): wrapper: running run_atlas (--nthreads 11)
[2026-02-05 22:22:25] Arguments: --nthreads 11
[2026-02-05 22:22:25] Threads: 11
[2026-02-05 22:22:25] Checking for CVMFS
[2026-02-05 22:22:25] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 22:22:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 22:22:25] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 22:22:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 22:22:26] 2.13.3.0 245921 19175 133472 155926 0 64 39722163 40960000 16058 16776704 0 38469364 99.684 33627250 45456 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-05 22:22:26] CVMFS is ok
[2026-02-05 22:22:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 22:22:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 22:22:26] Further information can be found at the LHC@home message board.
[2026-02-05 22:22:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 22:22:26] Checking for apptainer binary...
[2026-02-05 22:22:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 22:22:26] Running /usr/bin/apptainer --version
[2026-02-05 22:22:26] apptainer version 1.4.5-2.el9
[2026-02-05 22:22:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 22:22:26] c-212-12.aglt2.org
[2026-02-05 22:22:26] apptainer works
[2026-02-05 22:22:26] Set ATHENA_PROC_NUMBER=11
[2026-02-05 22:22:26] Set ATHENA_CORE_NUMBER=11
[2026-02-05 22:22:26] Starting ATLAS job with PandaID=6985830253
[2026-02-05 22:22:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-06 01:17:07]  *** The last 200 lines of the pilot log: ***
[2026-02-06 01:17:07] 2026-02-06 06:16:24,300 | INFO     | log transfer has been attempted: DONE
[2026-02-06 01:17:07] 2026-02-06 06:16:24,300 | INFO     | job 6985830253 has finished - writing final server update
[2026-02-06 01:17:07] 2026-02-06 06:16:24,301 | INFO     | total number of processed events: 400 (read)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,388 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6985830253/memory_monitor_summary.json (trf name=prmon)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,389 | INFO     | extracted standard info from prmon json
[2026-02-06 01:17:07] 2026-02-06 06:16:24,389 | INFO     | extracted standard memory fields from prmon json
[2026-02-06 01:17:07] 2026-02-06 06:16:24,389 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-06 01:17:07] 2026-02-06 06:16:24,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-06 01:17:07] 2026-02-06 06:16:24,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-06 01:17:07] 2026-02-06 06:16:24,396 | INFO     | fitting pss+swap vs Time
[2026-02-06 01:17:07] 2026-02-06 06:16:24,396 | INFO     | sum of square deviations: 1550736713.684205
[2026-02-06 01:17:07] 2026-02-06 06:16:24,425 | INFO     | sum of deviations: -47994426687.263145
[2026-02-06 01:17:07] 2026-02-06 06:16:24,425 | INFO     | mean x: 1770353367.4210527
[2026-02-06 01:17:07] 2026-02-06 06:16:24,425 | INFO     | mean y: 2702437.128654971
[2026-02-06 01:17:07] 2026-02-06 06:16:24,425 | INFO     | intersect: 54794140695.771706
[2026-02-06 01:17:07] 2026-02-06 06:16:24,426 | INFO     | chi2: 2.6478143851979987
[2026-02-06 01:17:07] 2026-02-06 06:16:24,426 | INFO     | sum of square deviations: 1418691080.2710838
[2026-02-06 01:17:07] 2026-02-06 06:16:24,427 | INFO     | sum of deviations: -34418150588.37953
[2026-02-06 01:17:07] 2026-02-06 06:16:24,427 | INFO     | mean x: 1770353214.933735
[2026-02-06 01:17:07] 2026-02-06 06:16:24,427 | INFO     | mean y: 2717790.692771084
[2026-02-06 01:17:07] 2026-02-06 06:16:24,427 | INFO     | intersect: 42952366515.18336
[2026-02-06 01:17:07] 2026-02-06 06:16:24,427 | INFO     | chi2: 1.893864325803622
[2026-02-06 01:17:07] 2026-02-06 06:16:24,427 | INFO     | current chi2=1.893864325803622 (change=28.474430217207146 %)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,428 | INFO     | sum of square deviations: 1294346391.565212
[2026-02-06 01:17:07] 2026-02-06 06:16:24,428 | INFO     | sum of deviations: -32939286112.08694
[2026-02-06 01:17:07] 2026-02-06 06:16:24,428 | INFO     | mean x: 1770353062.4347825
[2026-02-06 01:17:07] 2026-02-06 06:16:24,428 | INFO     | mean y: 2719604.944099379
[2026-02-06 01:17:07] 2026-02-06 06:16:24,429 | INFO     | intersect: 45055702657.20969
[2026-02-06 01:17:07] 2026-02-06 06:16:24,450 | INFO     | chi2: 1.8863616817188014
[2026-02-06 01:17:07] 2026-02-06 06:16:24,450 | INFO     | current chi2=1.8863616817188014 (change=0.3961553096807564 %)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,450 | INFO     | right removable region: 160
[2026-02-06 01:17:07] 2026-02-06 06:16:24,451 | INFO     | sum of square deviations: 1418647160.2710838
[2026-02-06 01:17:07] 2026-02-06 06:16:24,451 | INFO     | sum of deviations: -75360963814.10242
[2026-02-06 01:17:07] 2026-02-06 06:16:24,451 | INFO     | mean x: 1770353519.933735
[2026-02-06 01:17:07] 2026-02-06 06:16:24,452 | INFO     | mean y: 2733598.5361445784
[2026-02-06 01:17:07] 2026-02-06 06:16:24,452 | INFO     | intersect: 94046940847.64604
[2026-02-06 01:17:07] 2026-02-06 06:16:24,452 | INFO     | chi2: 1.1419448289986442
[2026-02-06 01:17:07] 2026-02-06 06:16:24,452 | INFO     | current chi2=1.1419448289986442 (change=56.87217218161417 %)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,452 | INFO     | sum of square deviations: 1294278681.8012476
[2026-02-06 01:17:07] 2026-02-06 06:16:24,453 | INFO     | sum of deviations: -72985161657.50317
[2026-02-06 01:17:07] 2026-02-06 06:16:24,453 | INFO     | mean x: 1770353672.447205
[2026-02-06 01:17:07] 2026-02-06 06:16:24,453 | INFO     | mean y: 2730591.881987578
[2026-02-06 01:17:07] 2026-02-06 06:16:24,453 | INFO     | intersect: 99834050377.42676
[2026-02-06 01:17:07] 2026-02-06 06:16:24,453 | INFO     | chi2: 1.110135836398472
[2026-02-06 01:17:07] 2026-02-06 06:16:24,453 | INFO     | current chi2=1.110135836398472 (change=2.7855104548321488 %)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,454 | INFO     | left removable region: 20
[2026-02-06 01:17:07] 2026-02-06 06:16:24,478 | INFO     | sum of square deviations: 851066950.9928573
[2026-02-06 01:17:07] 2026-02-06 06:16:24,479 | INFO     | sum of deviations: -43119005194.16426
[2026-02-06 01:17:07] 2026-02-06 06:16:24,479 | INFO     | mean x: 1770353641.9928572
[2026-02-06 01:17:07] 2026-02-06 06:16:24,479 | INFO     | mean y: 2729705.8357142857
[2026-02-06 01:17:07] 2026-02-06 06:16:24,479 | INFO     | intersect: 89697069023.72832
[2026-02-06 01:17:07] 2026-02-06 06:16:24,479 | INFO     | chi2: 0.2901908998905607
[2026-02-06 01:17:07] 2026-02-06 06:16:24,479 | INFO     | current memory leak: -50.66 B/s (using 140 data points, chi2=0.29)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | could have reported an average CPU frequency of 3080 MHz (9 samples)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | ..............................
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | . Timing measurements:
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | . get job = 0 s
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | . initial setup = 6 s
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | . payload setup = 5 s
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | . stage-in = 0 s
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | . payload execution = 10395 s
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | . stage-out = 2 s
[2026-02-06 01:17:07] 2026-02-06 06:16:24,480 | INFO     | . log creation = 0 s
[2026-02-06 01:17:07] 2026-02-06 06:16:24,481 | INFO     | ..............................
[2026-02-06 01:17:07] 2026-02-06 06:16:24,667 | INFO     | time since job start (10423s) is within the limit (349056.0s)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,674 | INFO     | 
[2026-02-06 01:17:07] 2026-02-06 06:16:24,685 | INFO     | job summary report
[2026-02-06 01:17:07] 2026-02-06 06:16:24,685 | INFO     | --------------------------------------------------
[2026-02-06 01:17:07] 2026-02-06 06:16:24,685 | INFO     | PanDA job id: 6985830253
[2026-02-06 01:17:07] 2026-02-06 06:16:24,685 | INFO     | task id: 48329843
[2026-02-06 01:17:07] 2026-02-06 06:16:24,685 | INFO     | errors: (none)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,685 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-06 01:17:07] 2026-02-06 06:16:24,685 | INFO     | pilot state: finished 
[2026-02-06 01:17:07] 2026-02-06 06:16:24,685 | INFO     | transexitcode: 0
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | exeerrorcode: 0
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | exeerrordiag: 
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | exitcode: 0
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | exitmsg: OK
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | cpuconsumptiontime: 78454 s
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | nevents: 400
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | neventsw: 0
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | pid: 539923
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | pgrp: 539923
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | corecount: 11
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | event service: False
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | sizes: {0: 2283207, 11: 2283207, 10405: 2311988, 10406: 2311987, 10409: 2321097, 10412: 2321299}
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | --------------------------------------------------
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | 
[2026-02-06 01:17:07] 2026-02-06 06:16:24,686 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-06 01:17:07] 2026-02-06 06:16:24,945 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,945 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,945 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-06 01:17:07] 2026-02-06 06:16:24,947 | INFO     | job 6985830253 has completed (purged errors)
[2026-02-06 01:17:07] 2026-02-06 06:16:24,947 | INFO     | overall cleanup function is called
[2026-02-06 01:17:07] 2026-02-06 06:16:25,980 | INFO     | --- collectZombieJob: --- 10, [539923]
[2026-02-06 01:17:07] 2026-02-06 06:16:25,980 | INFO     | zombie collector waiting for pid 539923
[2026-02-06 01:17:07] 2026-02-06 06:16:25,980 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-06 01:17:07] 2026-02-06 06:16:25,980 | INFO     | collected zombie processes
[2026-02-06 01:17:07] 2026-02-06 06:16:25,980 | INFO     | will attempt to kill all subprocesses of pid=539923
[2026-02-06 01:17:07] 2026-02-06 06:16:27,673 | INFO     | process IDs to be killed: [539923] (in reverse order)
[2026-02-06 01:17:07] 2026-02-06 06:16:27,827 | WARNING  | found no corresponding commands to process id(s)
[2026-02-06 01:17:07] 2026-02-06 06:16:27,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-06 01:17:07] 2026-02-06 06:16:27,893 | INFO     | did not find any defunct processes belonging to 539923
[2026-02-06 01:17:07] 2026-02-06 06:16:27,925 | INFO     | did not find any defunct processes belonging to 539923
[2026-02-06 01:17:07] 2026-02-06 06:16:27,925 | INFO     | ready for new job
[2026-02-06 01:17:07] 2026-02-06 06:16:27,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-06 01:17:07] 2026-02-06 06:16:27,931 | INFO     | **************************************
[2026-02-06 01:17:07] 2026-02-06 06:16:27,938 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-06 01:17:07] 2026-02-06 06:16:27,938 | INFO     | **************************************
[2026-02-06 01:17:07] 2026-02-06 06:16:27,938 | INFO     | 
[2026-02-06 01:17:07] 2026-02-06 06:16:27,947 | INFO     | architecture information:
[2026-02-06 01:17:07] 2026-02-06 06:16:27,951 | INFO     | executing command: cat /etc/os-release
[2026-02-06 01:17:07] 2026-02-06 06:16:28,055 | INFO     | cat /etc/os-release:
[2026-02-06 01:17:07] NAME="CentOS Linux"
[2026-02-06 01:17:07] VERSION="7 (Core)"
[2026-02-06 01:17:07] ID="centos"
[2026-02-06 01:17:07] ID_LIKE="rhel fedora"
[2026-02-06 01:17:07] VERSION_ID="7"
[2026-02-06 01:17:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-06 01:17:07] ANSI_COLOR="0;31"
[2026-02-06 01:17:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-06 01:17:07] HOME_URL="https://www.centos.org/"
[2026-02-06 01:17:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-06 01:17:07] 
[2026-02-06 01:17:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-06 01:17:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-06 01:17:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-06 01:17:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-06 01:17:07] 
[2026-02-06 01:17:07] 2026-02-06 06:16:28,055 | INFO     | **************************************
[2026-02-06 01:17:07] 2026-02-06 06:16:28,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-06 01:17:07] 2026-02-06 06:16:28,696 | INFO     | sufficient remaining disk space (120120672256 B)
[2026-02-06 01:17:07] 2026-02-06 06:16:28,697 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-06 01:17:07] 2026-02-06 06:16:28,697 | INFO     | current server update state: UPDATING_FINAL
[2026-02-06 01:17:07] 2026-02-06 06:16:28,697 | INFO     | update_server=False
[2026-02-06 01:17:07] 2026-02-06 06:16:28,697 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-06 01:17:07] 2026-02-06 06:16:28,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-06 01:17:07] 2026-02-06 06:16:28,697 | INFO     | aborting loop
[2026-02-06 01:17:07] 2026-02-06 06:16:28,698 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-06 01:17:07] 2026-02-06 06:16:28,783 | INFO     | all data control threads have been joined
[2026-02-06 01:17:07] 2026-02-06 06:16:29,030 | INFO     | all job control threads have been joined
[2026-02-06 01:17:07] 2026-02-06 06:16:29,703 | INFO     | [job] retrieve thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:29,715 | INFO     | [job] job monitor thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:29,752 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-06 01:17:07] 2026-02-06 06:16:29,790 | INFO     | [data] control thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:29,801 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:29,801 | INFO     | [payload] execute_payloads thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:29,841 | INFO     | all payload control threads have been joined
[2026-02-06 01:17:07] 2026-02-06 06:16:29,983 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-06 01:17:07] 2026-02-06 06:16:30,036 | INFO     | [job] control thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:30,121 | INFO     | [job] validate thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:30,404 | INFO     | [payload] validate_pre thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:30,408 | INFO     | [job] create_data_payload thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:30,508 | INFO     | [data] copytool_in thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:30,760 | INFO     | [job] queue monitor thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:30,849 | INFO     | [payload] control thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:30,897 | INFO     | [payload] failed_post thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:30,918 | INFO     | [payload] validate_post thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:31,990 | INFO     | [data] copytool_out thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:32,708 | INFO     | [data] queue_monitor thread has finished
[2026-02-06 01:17:07] 2026-02-06 06:16:58,924 | INFO     | [monitor] cgroup control has ended
[2026-02-06 01:17:07] 2026-02-06 06:17:01,037 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139666836956992)>', '<ExcThread(monitor, started 139666447636224)>']
[2026-02-06 01:17:07] 2026-02-06 06:17:01,461 | INFO     | PID=535457 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-06 01:17:07] 2026-02-06 06:17:01,461 | INFO     | .. there are 20 such processes running
[2026-02-06 01:17:07] 2026-02-06 06:17:01,483 | INFO     | found 0 job(s) in 20 queues
[2026-02-06 01:17:07] 2026-02-06 06:17:01,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-06 01:17:07] 2026-02-06 06:17:01,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-06 01:17:07] 2026-02-06 06:17:01,486 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-06 01:17:07] 2026-02-06 06:17:01,499 | INFO     | [monitor] control thread has ended
[2026-02-06 01:17:07] 2026-02-06 06:17:06,065 | INFO     | all workflow threads have been joined
[2026-02-06 01:17:07] 2026-02-06 06:17:06,065 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-06 01:17:07] 2026-02-06 06:17:06,065 | INFO     | traces error code: 0
[2026-02-06 01:17:07] 2026-02-06 06:17:06,065 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-06 01:17:07] 2026-02-06 06:17:06,318 [wrapper] ==== pilot stdout END ====
[2026-02-06 01:17:07] 2026-02-06 06:17:06,359 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-06 01:17:07] 2026-02-06 06:17:06,380 [wrapper] pilotpid: 535457
[2026-02-06 01:17:07] 2026-02-06 06:17:06,407 [wrapper] Pilot exit status: 0
[2026-02-06 01:17:07] 2026-02-06 06:17:06,564 [wrapper] pandaids: 6985830253
[2026-02-06 01:17:07] 2026-02-06 06:17:06,929 [wrapper] cleanup supervisor_pilot  945153 535458
[2026-02-06 01:17:07] 2026-02-06 06:17:06,957 [wrapper] Test setup, not cleaning
[2026-02-06 01:17:07] 2026-02-06 06:17:06,971 [wrapper] apfmon messages muted
[2026-02-06 01:17:07] 2026-02-06 06:17:07,014 [wrapper] ==== wrapper stdout END ====
[2026-02-06 01:17:07] 2026-02-06 06:17:07,039 [wrapper] ==== wrapper stderr END ====
[2026-02-06 01:17:07]  *** Error codes and diagnostics ***
[2026-02-06 01:17:07]     "exeErrorCode": 0,
[2026-02-06 01:17:07]     "exeErrorDiag": "",
[2026-02-06 01:17:07]     "pilotErrorCode": 0,
[2026-02-06 01:17:07]     "pilotErrorDiag": "",
[2026-02-06 01:17:07]  *** Listing of results directory ***
[2026-02-06 01:17:07] total 470852
[2026-02-06 01:17:07] -rwx------. 1 boincer umatlas     36322 Jan 30 08:00 runpilot2-wrapper.sh
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas    584422 Jan 30 08:01 pilot3.tar.gz
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas      5111 Jan 30 08:01 queuedata.json
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas       100 Feb  5 22:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-06 01:17:07] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  5 22:22 run_atlas
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas       105 Feb  5 22:22 job.xml
[2026-02-06 01:17:07] -rw-r--r--. 2 boincer umatlas 274748789 Feb  5 22:22 EVNT.48329840._000005.pool.root.1
[2026-02-06 01:17:07] -rw-r--r--. 2 boincer umatlas     15845 Feb  5 22:22 start_atlas.sh
[2026-02-06 01:17:07] drwxrwx--x. 2 boincer umatlas      4096 Feb  5 22:22 shared
[2026-02-06 01:17:07] -rw-r--r--. 2 boincer umatlas    597769 Feb  5 22:22 input.tar.gz
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas         0 Feb  5 22:22 boinc_lockfile
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas      2608 Feb  5 22:22 pandaJob.out
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas        57 Feb  5 22:22 setup.sh.local
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas   1007453 Feb  5 22:22 agis_schedconf.cvmfs.json
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas   1513144 Feb  5 22:22 agis_ddmendpoints.agis.ALL.json
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas       430 Feb  5 22:22 workernode_map.json
[2026-02-06 01:17:07] drwx------. 5 boincer umatlas      4096 Feb  5 22:22 pilot3
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas      6959 Feb  6 01:10 init_data.xml
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas 199834328 Feb  6 01:15 HITS.48329843._000106.pool.root.1
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas       531 Feb  6 01:15 boinc_task_state.xml
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas      1044 Feb  6 01:16 memory_monitor_summary.json
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas    440727 Feb  6 01:16 log.48329843._000106.job.log.tgz.1
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas      6340 Feb  6 01:16 heartbeat.json
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas        95 Feb  6 01:17 pilot_heartbeat.json
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas        28 Feb  6 01:17 wrapper_checkpoint.txt
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas      8192 Feb  6 01:17 boinc_mmap_file
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas      4820 Feb  6 01:17 pilotlog.txt
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas   1372987 Feb  6 01:17 log.48329843._000106.job.log.1
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas       357 Feb  6 01:17 output.list
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas       620 Feb  6 01:17 runtime_log
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas   1832960 Feb  6 01:17 result.tar.gz
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas      9344 Feb  6 01:17 runtime_log.err
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas       658 Feb  6 01:17 iXSKDmSI358nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmyLLKDmf7lISm.diag
[2026-02-06 01:17:07] -rw-r--r--. 1 boincer umatlas     21109 Feb  6 01:17 stderr.txt
[2026-02-06 01:17:07] HITS file was successfully produced:
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas 199834328 Feb  6 01:15 shared/HITS.pool.root.1
[2026-02-06 01:17:07]  *** Contents of shared directory: ***
[2026-02-06 01:17:07] total 465860
[2026-02-06 01:17:07] -rw-r--r--. 2 boincer umatlas 274748789 Feb  5 22:22 ATLAS.root_0
[2026-02-06 01:17:07] -rw-r--r--. 2 boincer umatlas     15845 Feb  5 22:22 start_atlas.sh
[2026-02-06 01:17:07] -rw-r--r--. 2 boincer umatlas    597769 Feb  5 22:22 input.tar.gz
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas 199834328 Feb  6 01:15 HITS.pool.root.1
[2026-02-06 01:17:07] -rw-------. 1 boincer umatlas   1832960 Feb  6 01:17 result.tar.gz
01:17:08 (531759): run_atlas exited; CPU time 78807.675753
01:17:08 (531759): called boinc_finish(0)

</stderr_txt>
]]>

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