Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:55:11 (28308): wrapper (7.7.26015): starting
16:55:11 (28308): wrapper: running run_atlas (--nthreads 8)
[2026-02-05 16:55:11] Arguments: --nthreads 8
[2026-02-05 16:55:11] Threads: 8
[2026-02-05 16:55:11] Checking for CVMFS
[2026-02-05 16:55:11] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 16:55:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 16:55:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 16:55:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 16:55:12] 2.10.1.0 4440 354678 172092 155917 2 1 15227732 18432001 1 130560 2 368580700 99.988 13975935 7302 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-02-05 16:55:12] CVMFS is ok
[2026-02-05 16:55:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 16:55:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 16:55:12] Further information can be found at the LHC@home message board.
[2026-02-05 16:55:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 16:55:12] Checking for apptainer binary...
[2026-02-05 16:55:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 16:55:12] Running /usr/bin/apptainer --version
[2026-02-05 16:55:12] apptainer version 1.1.9-1.el8
[2026-02-05 16:55:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 16:55:13] c-16-31.aglt2.org
[2026-02-05 16:55:13] apptainer works
[2026-02-05 16:55:13] Set ATHENA_PROC_NUMBER=8
[2026-02-05 16:55:13] Set ATHENA_CORE_NUMBER=8
[2026-02-05 16:55:13] Starting ATLAS job with PandaID=6992858868
[2026-02-05 16:55:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 18:47:44]  *** The last 200 lines of the pilot log: ***
[2026-02-05 18:47:44] 2026-02-05 23:46:44,409 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,409 | INFO     | log transfer has been attempted: DONE
[2026-02-05 18:47:44] 2026-02-05 23:46:44,409 | INFO     | job 6992858868 has finished - writing final server update
[2026-02-05 18:47:44] 2026-02-05 23:46:44,409 | INFO     | total number of processed events: 400 (read)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,425 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6992858868/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,425 | INFO     | extracted standard info from prmon json
[2026-02-05 18:47:44] 2026-02-05 23:46:44,426 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 18:47:44] 2026-02-05 23:46:44,426 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 18:47:44] 2026-02-05 23:46:44,426 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 18:47:44] 2026-02-05 23:46:44,426 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 18:47:44] 2026-02-05 23:46:44,427 | INFO     | fitting pss+swap vs Time
[2026-02-05 18:47:44] 2026-02-05 23:46:44,428 | INFO     | sum of square deviations: 412686807.5
[2026-02-05 18:47:44] 2026-02-05 23:46:44,428 | INFO     | sum of deviations: -8017410377.000001
[2026-02-05 18:47:44] 2026-02-05 23:46:44,428 | INFO     | mean x: 1770331872.5
[2026-02-05 18:47:44] 2026-02-05 23:46:44,428 | INFO     | mean y: 2566744.5454545454
[2026-02-05 18:47:44] 2026-02-05 23:46:44,428 | INFO     | intersect: 34395420762.09323
[2026-02-05 18:47:44] 2026-02-05 23:46:44,429 | INFO     | chi2: 2.0010164657458103
[2026-02-05 18:47:44] 2026-02-05 23:46:44,429 | INFO     | sum of square deviations: 358927660.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,429 | INFO     | sum of deviations: -647551111.9999989
[2026-02-05 18:47:44] 2026-02-05 23:46:44,429 | INFO     | mean x: 1770331720.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,429 | INFO     | mean y: 2586923.1904761903
[2026-02-05 18:47:44] 2026-02-05 23:46:44,429 | INFO     | intersect: 3196490323.9338765
[2026-02-05 18:47:44] 2026-02-05 23:46:44,429 | INFO     | chi2: 1.3265133442143908
[2026-02-05 18:47:44] 2026-02-05 23:46:44,430 | INFO     | current chi2=1.3265133442143908 (change=33.708024550413754 %)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,430 | INFO     | sum of square deviations: 310052325.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,430 | INFO     | sum of deviations: -399002891.000002
[2026-02-05 18:47:44] 2026-02-05 23:46:44,430 | INFO     | mean x: 1770331567.5
[2026-02-05 18:47:44] 2026-02-05 23:46:44,430 | INFO     | mean y: 2587699.16
[2026-02-05 18:47:44] 2026-02-05 23:46:44,430 | INFO     | intersect: 2280807717.220065
[2026-02-05 18:47:44] 2026-02-05 23:46:44,431 | INFO     | chi2: 1.3274368209131489
[2026-02-05 18:47:44] 2026-02-05 23:46:44,431 | INFO     | current chi2=1.3274368209131489 (change=-0.06961684198547934 %)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,431 | INFO     | right removable region: 99
[2026-02-05 18:47:44] 2026-02-05 23:46:44,431 | INFO     | sum of square deviations: 358927660.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,431 | INFO     | sum of deviations: -19713798952.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,431 | INFO     | mean x: 1770332025.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,431 | INFO     | mean y: 2598922.238095238
[2026-02-05 18:47:44] 2026-02-05 23:46:44,432 | INFO     | intersect: 97236592031.42627
[2026-02-05 18:47:44] 2026-02-05 23:46:44,432 | INFO     | chi2: 0.8588565546477585
[2026-02-05 18:47:44] 2026-02-05 23:46:44,432 | INFO     | current chi2=0.8588565546477585 (change=57.07898613779526 %)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,432 | INFO     | sum of square deviations: 310052325.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,432 | INFO     | sum of deviations: -14482357760.999998
[2026-02-05 18:47:44] 2026-02-05 23:46:44,432 | INFO     | mean x: 1770332177.5
[2026-02-05 18:47:44] 2026-02-05 23:46:44,432 | INFO     | mean y: 2582562.06
[2026-02-05 18:47:44] 2026-02-05 23:46:44,433 | INFO     | intersect: 82693734613.13766
[2026-02-05 18:47:44] 2026-02-05 23:46:44,433 | INFO     | chi2: 0.8305842862712742
[2026-02-05 18:47:44] 2026-02-05 23:46:44,433 | INFO     | current chi2=0.8305842862712742 (change=3.291849869863249 %)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,433 | INFO     | left removable region: 20
[2026-02-05 18:47:44] 2026-02-05 23:46:44,433 | INFO     | sum of square deviations: 152858680.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,433 | INFO     | sum of deviations: 350844245.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,433 | INFO     | mean x: 1770332147.0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,433 | INFO     | mean y: 2575061.911392405
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | intersect: -4060726057.223249
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | chi2: 0.001639504487383563
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | current memory leak: 2.30 B/s (using 79 data points, chi2=0.00)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | could have reported an average CPU frequency of 3257 MHz (7 samples)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | ..............................
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | . Timing measurements:
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | . get job = 0 s
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | . initial setup = 5 s
[2026-02-05 18:47:44] 2026-02-05 23:46:44,434 | INFO     | . payload setup = 4 s
[2026-02-05 18:47:44] 2026-02-05 23:46:44,435 | INFO     | . stage-in = 0 s
[2026-02-05 18:47:44] 2026-02-05 23:46:44,435 | INFO     | . payload execution = 6652 s
[2026-02-05 18:47:44] 2026-02-05 23:46:44,435 | INFO     | . stage-out = 0 s
[2026-02-05 18:47:44] 2026-02-05 23:46:44,435 | INFO     | . log creation = 0 s
[2026-02-05 18:47:44] 2026-02-05 23:46:44,435 | INFO     | ..............................
[2026-02-05 18:47:44] 2026-02-05 23:46:44,825 | INFO     | 
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | job summary report
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | --------------------------------------------------
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | PanDA job id: 6992858868
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | task id: 48438177
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | errors: (none)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | pilot state: finished 
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | transexitcode: 0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | exeerrorcode: 0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | exeerrordiag: 
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | exitcode: 0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | exitmsg: OK
[2026-02-05 18:47:44] 2026-02-05 23:46:44,826 | INFO     | cpuconsumptiontime: 49797 s
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | nevents: 400
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | neventsw: 0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | pid: 52086
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | pgrp: 52086
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | corecount: 8
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | event service: False
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | sizes: {0: 2283202, 11: 2283202, 6661: 2310440, 6662: 2319466, 6664: 2319716}
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | --------------------------------------------------
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | 
[2026-02-05 18:47:44] 2026-02-05 23:46:44,827 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-05 18:47:44] 2026-02-05 23:46:44,843 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,844 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 18:47:44] 2026-02-05 23:46:44,845 | INFO     | job 6992858868 has completed (purged errors)
[2026-02-05 18:47:44] 2026-02-05 23:46:44,846 | INFO     | overall cleanup function is called
[2026-02-05 18:47:44] 2026-02-05 23:46:45,853 | INFO     | --- collectZombieJob: --- 10, [52086]
[2026-02-05 18:47:44] 2026-02-05 23:46:45,853 | INFO     | zombie collector waiting for pid 52086
[2026-02-05 18:47:44] 2026-02-05 23:46:45,853 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 18:47:44] 2026-02-05 23:46:45,853 | INFO     | collected zombie processes
[2026-02-05 18:47:44] 2026-02-05 23:46:45,853 | INFO     | will attempt to kill all subprocesses of pid=52086
[2026-02-05 18:47:44] 2026-02-05 23:46:46,001 | INFO     | process IDs to be killed: [52086] (in reverse order)
[2026-02-05 18:47:44] 2026-02-05 23:46:46,059 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 18:47:44] 2026-02-05 23:46:46,060 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 18:47:44] 2026-02-05 23:46:46,069 | INFO     | did not find any defunct processes belonging to 52086
[2026-02-05 18:47:44] 2026-02-05 23:46:46,075 | INFO     | did not find any defunct processes belonging to 52086
[2026-02-05 18:47:44] 2026-02-05 23:46:46,075 | INFO     | ready for new job
[2026-02-05 18:47:44] 2026-02-05 23:46:46,076 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 18:47:44] 2026-02-05 23:46:46,077 | INFO     | **************************************
[2026-02-05 18:47:44] 2026-02-05 23:46:46,077 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 18:47:44] 2026-02-05 23:46:46,077 | INFO     | **************************************
[2026-02-05 18:47:44] 2026-02-05 23:46:46,077 | INFO     | 
[2026-02-05 18:47:44] 2026-02-05 23:46:46,090 | INFO     | architecture information:
[2026-02-05 18:47:44] 2026-02-05 23:46:46,090 | INFO     | executing command: cat /etc/os-release
[2026-02-05 18:47:44] 2026-02-05 23:46:46,100 | INFO     | cat /etc/os-release:
[2026-02-05 18:47:44] NAME="CentOS Linux"
[2026-02-05 18:47:44] VERSION="7 (Core)"
[2026-02-05 18:47:44] ID="centos"
[2026-02-05 18:47:44] ID_LIKE="rhel fedora"
[2026-02-05 18:47:44] VERSION_ID="7"
[2026-02-05 18:47:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 18:47:44] ANSI_COLOR="0;31"
[2026-02-05 18:47:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 18:47:44] HOME_URL="https://www.centos.org/"
[2026-02-05 18:47:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 18:47:44] 
[2026-02-05 18:47:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 18:47:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 18:47:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 18:47:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 18:47:44] 
[2026-02-05 18:47:44] 2026-02-05 23:46:46,100 | INFO     | **************************************
[2026-02-05 18:47:44] 2026-02-05 23:46:46,603 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-05 18:47:44] 2026-02-05 23:46:46,612 | INFO     | sufficient remaining disk space (105472065536 B)
[2026-02-05 18:47:44] 2026-02-05 23:46:46,612 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 18:47:44] 2026-02-05 23:46:46,612 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 18:47:44] 2026-02-05 23:46:46,612 | INFO     | update_server=False
[2026-02-05 18:47:44] 2026-02-05 23:46:46,612 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 18:47:44] 2026-02-05 23:46:46,613 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 18:47:44] 2026-02-05 23:46:46,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 18:47:44] 2026-02-05 23:46:46,897 | INFO     | all payload control threads have been joined
[2026-02-05 18:47:44] 2026-02-05 23:46:47,343 | INFO     | all data control threads have been joined
[2026-02-05 18:47:44] 2026-02-05 23:46:47,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 18:47:44] 2026-02-05 23:46:47,574 | INFO     | aborting loop
[2026-02-05 18:47:44] 2026-02-05 23:46:47,618 | INFO     | [job] retrieve thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:47,661 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:47,661 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:47,867 | INFO     | all job control threads have been joined
[2026-02-05 18:47:44] 2026-02-05 23:46:47,902 | INFO     | [payload] control thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:47,921 | INFO     | [data] copytool_in thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:47,922 | INFO     | [payload] failed_post thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:48,087 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:48,348 | INFO     | [data] control thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:48,566 | INFO     | [payload] validate_post thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:48,580 | INFO     | [job] job monitor thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:48,618 | INFO     | [data] copytool_out thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:48,872 | INFO     | [job] control thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:48,955 | INFO     | [job] validate thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:49,497 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 18:47:44] 2026-02-05 23:46:50,502 | INFO     | [job] queue monitor thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:50,618 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:46:56,713 | INFO     | job.realtimelogging is not enabled
[2026-02-05 18:47:44] 2026-02-05 23:46:57,718 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 18:47:44] 2026-02-05 23:47:16,307 | INFO     | PID=37293 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-05 18:47:44] 2026-02-05 23:47:16,308 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 18:47:44] 2026-02-05 23:47:16,308 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 18:47:44] 2026-02-05 23:47:16,308 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 18:47:44] 2026-02-05 23:47:38,324 | INFO     | [monitor] cgroup control has ended
[2026-02-05 18:47:44] 2026-02-05 23:47:38,627 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711118108480)>', '<ExcThread(monitor, started 139710672377600)>']
[2026-02-05 18:47:44] 2026-02-05 23:47:39,425 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 18:47:44] 2026-02-05 23:47:39,425 | INFO     | [monitor] control thread has ended
[2026-02-05 18:47:44] 2026-02-05 23:47:43,653 | INFO     | all workflow threads have been joined
[2026-02-05 18:47:44] 2026-02-05 23:47:43,653 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 18:47:44] 2026-02-05 23:47:43,653 | INFO     | traces error code: 0
[2026-02-05 18:47:44] 2026-02-05 23:47:43,653 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 18:47:44] 2026-02-05 23:47:43,725 [wrapper] ==== pilot stdout END ====
[2026-02-05 18:47:44] 2026-02-05 23:47:43,728 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 18:47:44] 2026-02-05 23:47:43,730 [wrapper] pilotpid: 37293
[2026-02-05 18:47:44] 2026-02-05 23:47:43,732 [wrapper] Pilot exit status: 0
[2026-02-05 18:47:44] 2026-02-05 23:47:43,740 [wrapper] pandaids: 6992858868
[2026-02-05 18:47:44] 2026-02-05 23:47:43,789 [wrapper] cleanup supervisor_pilot 2534254 37294
[2026-02-05 18:47:44] 2026-02-05 23:47:43,792 [wrapper] Test setup, not cleaning
[2026-02-05 18:47:44] 2026-02-05 23:47:43,794 [wrapper] apfmon messages muted
[2026-02-05 18:47:44] 2026-02-05 23:47:43,796 [wrapper] ==== wrapper stdout END ====
[2026-02-05 18:47:44] 2026-02-05 23:47:43,798 [wrapper] ==== wrapper stderr END ====
[2026-02-05 18:47:44]  *** Error codes and diagnostics ***
[2026-02-05 18:47:44]     "exeErrorCode": 0,
[2026-02-05 18:47:44]     "exeErrorDiag": "",
[2026-02-05 18:47:44]     "pilotErrorCode": 0,
[2026-02-05 18:47:44]     "pilotErrorDiag": "",
[2026-02-05 18:47:44]  *** Listing of results directory ***
[2026-02-05 18:47:44] total 409808
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas    584422 Feb  1 17:04 pilot3.tar.gz
[2026-02-05 18:47:44] -rwx------ 1 boincer umatlas     36322 Feb  1 17:04 runpilot2-wrapper.sh
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas      5111 Feb  1 17:04 queuedata.json
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas       100 Feb  5 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 18:47:44] -rwxr-xr-x 1 boincer umatlas      7986 Feb  5 16:55 run_atlas
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas       105 Feb  5 16:55 job.xml
[2026-02-05 18:47:44] -rw-r--r-- 2 boincer umatlas 249825436 Feb  5 16:55 EVNT.48438173._000003.pool.root.1
[2026-02-05 18:47:44] -rw-r--r-- 2 boincer umatlas     15845 Feb  5 16:55 start_atlas.sh
[2026-02-05 18:47:44] drwxrwx--x 2 boincer umatlas      4096 Feb  5 16:55 shared
[2026-02-05 18:47:44] -rw-r--r-- 2 boincer umatlas    597766 Feb  5 16:55 input.tar.gz
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas         0 Feb  5 16:55 boinc_lockfile
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas      2607 Feb  5 16:55 pandaJob.out
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas        57 Feb  5 16:55 setup.sh.local
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas   1007445 Feb  5 16:55 agis_schedconf.cvmfs.json
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas   1513144 Feb  5 16:55 agis_ddmendpoints.agis.ALL.json
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas       434 Feb  5 16:55 workernode_map.json
[2026-02-05 18:47:44] drwx------ 5 boincer umatlas      4096 Feb  5 16:55 pilot3
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas      6013 Feb  5 18:45 init_data.xml
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas 163249572 Feb  5 18:46 HITS.48438177._000068.pool.root.1
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas      1046 Feb  5 18:46 memory_monitor_summary.json
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas       529 Feb  5 18:46 boinc_task_state.xml
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas    364685 Feb  5 18:46 log.48438177._000068.job.log.tgz.1
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas      6376 Feb  5 18:46 heartbeat.json
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas        95 Feb  5 18:47 pilot_heartbeat.json
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas      8192 Feb  5 18:47 boinc_mmap_file
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas        27 Feb  5 18:47 wrapper_checkpoint.txt
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas      4815 Feb  5 18:47 pilotlog.txt
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas    946220 Feb  5 18:47 log.48438177._000068.job.log.1
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas       357 Feb  5 18:47 output.list
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas       620 Feb  5 18:47 runtime_log
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas   1331200 Feb  5 18:47 result.tar.gz
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas      9336 Feb  5 18:47 runtime_log.err
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas       655 Feb  5 18:47 h0FNDmnju68nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmXDRKDmGdCxwn.diag
[2026-02-05 18:47:44] -rw-r--r-- 1 boincer umatlas     20979 Feb  5 18:47 stderr.txt
[2026-02-05 18:47:44] HITS file was successfully produced:
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas 163249572 Feb  5 18:46 shared/HITS.pool.root.1
[2026-02-05 18:47:44]  *** Contents of shared directory: ***
[2026-02-05 18:47:44] total 405304
[2026-02-05 18:47:44] -rw-r--r-- 2 boincer umatlas 249825436 Feb  5 16:55 ATLAS.root_0
[2026-02-05 18:47:44] -rw-r--r-- 2 boincer umatlas     15845 Feb  5 16:55 start_atlas.sh
[2026-02-05 18:47:44] -rw-r--r-- 2 boincer umatlas    597766 Feb  5 16:55 input.tar.gz
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas 163249572 Feb  5 18:46 HITS.pool.root.1
[2026-02-05 18:47:44] -rw------- 1 boincer umatlas   1331200 Feb  5 18:47 result.tar.gz
18:47:45 (28308): run_atlas exited; CPU time 49902.755816
18:47:45 (28308): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN