Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:23:40 (1065): wrapper (7.7.26015): starting
16:23:40 (1065): wrapper: running run_atlas (--nthreads 8)
[2026-02-05 16:23:40] Arguments: --nthreads 8
[2026-02-05 16:23:40] Threads: 8
[2026-02-05 16:23:40] Checking for CVMFS
[2026-02-05 16:23:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 16:23:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 16:23:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 16:23:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 16:23:40] 2.11.2.0 2850 138570 103512 155917 3 1 10878305 20275200 1 130560 0 32983591 99.749 11498645 26316 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-05 16:23:40] CVMFS is ok
[2026-02-05 16:23:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 16:23:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 16:23:40] Further information can be found at the LHC@home message board.
[2026-02-05 16:23:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 16:23:40] Checking for apptainer binary...
[2026-02-05 16:23:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 16:23:40] Running /usr/bin/apptainer --version
[2026-02-05 16:23:40] apptainer version 1.3.2-1.el7
[2026-02-05 16:23:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 16:23:42] c-204-4.aglt2.org
[2026-02-05 16:23:42] apptainer works
[2026-02-05 16:23:42] Set ATHENA_PROC_NUMBER=8
[2026-02-05 16:23:42] Set ATHENA_CORE_NUMBER=8
[2026-02-05 16:23:42] Starting ATLAS job with PandaID=6986149956
[2026-02-05 16:23:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:30:57 (23875): wrapper (7.7.26015): starting
18:30:57 (23875): wrapper: running run_atlas (--nthreads 8)
[2026-02-05 18:30:57] Arguments: --nthreads 8
[2026-02-05 18:30:57] Threads: 8
[2026-02-05 18:30:57] This job has been restarted, cleaning up previous attempt
[2026-02-05 18:30:57] Checking for CVMFS
[2026-02-05 18:30:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 18:30:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 18:30:57] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 18:30:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 18:30:57] 2.11.2.0 2850 138697 108204 155921 0 9 11101622 20275200 1 130560 0 33035705 99.749 11505323 26320 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-05 18:30:57] CVMFS is ok
[2026-02-05 18:30:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 18:30:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 18:30:57] Further information can be found at the LHC@home message board.
[2026-02-05 18:30:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 18:30:57] Checking for apptainer binary...
[2026-02-05 18:30:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 18:30:57] Running /usr/bin/apptainer --version
[2026-02-05 18:30:57] apptainer version 1.3.2-1.el7
[2026-02-05 18:30:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 18:30:59] c-204-4.aglt2.org
[2026-02-05 18:30:59] apptainer works
[2026-02-05 18:30:59] Set ATHENA_PROC_NUMBER=8
[2026-02-05 18:30:59] Set ATHENA_CORE_NUMBER=8
[2026-02-05 18:30:59] Starting ATLAS job with PandaID=6986149956
[2026-02-05 18:30:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 20:39:35]  *** The last 200 lines of the pilot log: ***
[2026-02-05 20:39:35] 2026-02-06 01:39:04,576 | INFO     | this job has now completed (state=finished)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,576 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,576 | INFO     | log transfer has been attempted: DONE
[2026-02-05 20:39:35] 2026-02-06 01:39:04,576 | INFO     | job 6986149956 has finished - writing final server update
[2026-02-05 20:39:35] 2026-02-06 01:39:04,576 | INFO     | total number of processed events: 400 (read)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,578 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6986149956/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,578 | INFO     | extracted standard info from prmon json
[2026-02-05 20:39:35] 2026-02-06 01:39:04,579 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 20:39:35] 2026-02-06 01:39:04,579 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 20:39:35] 2026-02-06 01:39:04,579 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 20:39:35] 2026-02-06 01:39:04,579 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 20:39:35] 2026-02-06 01:39:04,581 | INFO     | fitting pss+swap vs Time
[2026-02-05 20:39:35] 2026-02-06 01:39:04,582 | INFO     | sum of square deviations: 620244187.5
[2026-02-05 20:39:35] 2026-02-06 01:39:04,582 | INFO     | sum of deviations: -12842579825.5
[2026-02-05 20:39:35] 2026-02-06 01:39:04,582 | INFO     | mean x: 1770338115.5
[2026-02-05 20:39:35] 2026-02-06 01:39:04,583 | INFO     | mean y: 2539963.0555555555
[2026-02-05 20:39:35] 2026-02-06 01:39:04,583 | INFO     | intersect: 36658600631.796585
[2026-02-05 20:39:35] 2026-02-06 01:39:04,583 | INFO     | chi2: 2.423260121202045
[2026-02-05 20:39:35] 2026-02-06 01:39:04,583 | INFO     | sum of square deviations: 549294020.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,584 | INFO     | sum of deviations: -3626051670.000005
[2026-02-05 20:39:35] 2026-02-06 01:39:04,584 | INFO     | mean x: 1770337963.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,584 | INFO     | mean y: 2559200.380165289
[2026-02-05 20:39:35] 2026-02-06 01:39:04,584 | INFO     | intersect: 11689081706.4882
[2026-02-05 20:39:35] 2026-02-06 01:39:04,585 | INFO     | chi2: 1.6674340827640624
[2026-02-05 20:39:35] 2026-02-06 01:39:04,585 | INFO     | current chi2=1.6674340827640624 (change=31.190462461085648 %)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,585 | INFO     | sum of square deviations: 483971865.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,585 | INFO     | sum of deviations: -2881023381.5000076
[2026-02-05 20:39:35] 2026-02-06 01:39:04,586 | INFO     | mean x: 1770337810.5
[2026-02-05 20:39:35] 2026-02-06 01:39:04,586 | INFO     | mean y: 2560940.7327586208
[2026-02-05 20:39:35] 2026-02-06 01:39:04,586 | INFO     | intersect: 10541158313.958225
[2026-02-05 20:39:35] 2026-02-06 01:39:04,586 | INFO     | chi2: 1.6689356333187297
[2026-02-05 20:39:35] 2026-02-06 01:39:04,586 | INFO     | current chi2=1.6689356333187297 (change=-0.09005156906582502 %)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,586 | INFO     | right removable region: 115
[2026-02-05 20:39:35] 2026-02-06 01:39:04,587 | INFO     | sum of square deviations: 549294020.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,587 | INFO     | sum of deviations: -32145097227.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,587 | INFO     | mean x: 1770338268.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,587 | INFO     | mean y: 2580696.0991735538
[2026-02-05 20:39:35] 2026-02-06 01:39:04,588 | INFO     | intersect: 103604101334.42467
[2026-02-05 20:39:35] 2026-02-06 01:39:04,588 | INFO     | chi2: 0.9174840840414265
[2026-02-05 20:39:35] 2026-02-06 01:39:04,588 | INFO     | current chi2=0.9174840840414265 (change=62.138440029033546 %)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,588 | INFO     | sum of square deviations: 483971865.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,589 | INFO     | sum of deviations: -30466143719.000004
[2026-02-05 20:39:35] 2026-02-06 01:39:04,589 | INFO     | mean x: 1770338420.5
[2026-02-05 20:39:35] 2026-02-06 01:39:04,589 | INFO     | mean y: 2576677.4482758623
[2026-02-05 20:39:35] 2026-02-06 01:39:04,589 | INFO     | intersect: 111445800242.14963
[2026-02-05 20:39:35] 2026-02-06 01:39:04,589 | INFO     | chi2: 0.9039185210194274
[2026-02-05 20:39:35] 2026-02-06 01:39:04,589 | INFO     | current chi2=0.9039185210194274 (change=1.4785611279755515 %)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,590 | INFO     | left removable region: 20
[2026-02-05 20:39:35] 2026-02-06 01:39:04,590 | INFO     | sum of square deviations: 265828240.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,590 | INFO     | sum of deviations: -14025893846.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,590 | INFO     | mean x: 1770338390.0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,591 | INFO     | mean y: 2585264.1578947366
[2026-02-05 20:39:35] 2026-02-06 01:39:04,591 | INFO     | intersect: 93410939205.93077
[2026-02-05 20:39:35] 2026-02-06 01:39:04,591 | INFO     | chi2: 0.09612183517697906
[2026-02-05 20:39:35] 2026-02-06 01:39:04,591 | INFO     | current memory leak: -52.76 B/s (using 95 data points, chi2=0.10)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,591 | INFO     | could have reported an average CPU frequency of 1745 MHz (8 samples)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | ..............................
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | . Timing measurements:
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | . get job = 0 s
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | . initial setup = 1 s
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | . payload setup = 8 s
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | . stage-in = 0 s
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | . payload execution = 7636 s
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | . stage-out = 2 s
[2026-02-05 20:39:35] 2026-02-06 01:39:04,592 | INFO     | . log creation = 0 s
[2026-02-05 20:39:35] 2026-02-06 01:39:04,593 | INFO     | ..............................
[2026-02-05 20:39:35] 2026-02-06 01:39:04,679 | INFO     | 
[2026-02-05 20:39:35] 2026-02-06 01:39:04,679 | INFO     | job summary report
[2026-02-05 20:39:35] 2026-02-06 01:39:04,680 | INFO     | --------------------------------------------------
[2026-02-05 20:39:35] 2026-02-06 01:39:04,680 | INFO     | PanDA job id: 6986149956
[2026-02-05 20:39:35] 2026-02-06 01:39:04,680 | INFO     | task id: 48317931
[2026-02-05 20:39:35] 2026-02-06 01:39:04,680 | INFO     | errors: (none)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,680 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 20:39:35] 2026-02-06 01:39:04,680 | INFO     | pilot state: finished 
[2026-02-05 20:39:35] 2026-02-06 01:39:04,681 | INFO     | transexitcode: 0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,681 | INFO     | exeerrorcode: 0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,681 | INFO     | exeerrordiag: 
[2026-02-05 20:39:35] 2026-02-06 01:39:04,681 | INFO     | exitcode: 0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,681 | INFO     | exitmsg: OK
[2026-02-05 20:39:35] 2026-02-06 01:39:04,681 | INFO     | cpuconsumptiontime: 57215 s
[2026-02-05 20:39:35] 2026-02-06 01:39:04,682 | INFO     | nevents: 400
[2026-02-05 20:39:35] 2026-02-06 01:39:04,682 | INFO     | neventsw: 0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,682 | INFO     | pid: 30099
[2026-02-05 20:39:35] 2026-02-06 01:39:04,682 | INFO     | pgrp: 30099
[2026-02-05 20:39:35] 2026-02-06 01:39:04,682 | INFO     | corecount: 8
[2026-02-05 20:39:35] 2026-02-06 01:39:04,682 | INFO     | event service: False
[2026-02-05 20:39:35] 2026-02-06 01:39:04,683 | INFO     | sizes: {0: 2282816, 1: 2283050, 11: 2283050, 7649: 2310614, 7652: 2319612, 7654: 2319668, 7657: 2319990}
[2026-02-05 20:39:35] 2026-02-06 01:39:04,683 | INFO     | --------------------------------------------------
[2026-02-05 20:39:35] 2026-02-06 01:39:04,683 | INFO     | 
[2026-02-05 20:39:35] 2026-02-06 01:39:04,683 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-05 20:39:35] 2026-02-06 01:39:04,714 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,714 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,714 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,715 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,715 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,715 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,715 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,715 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,715 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,717 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,717 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,717 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 20:39:35] 2026-02-06 01:39:04,718 | INFO     | job 6986149956 has completed (purged errors)
[2026-02-05 20:39:35] 2026-02-06 01:39:04,718 | INFO     | overall cleanup function is called
[2026-02-05 20:39:35] 2026-02-06 01:39:05,725 | INFO     | --- collectZombieJob: --- 10, [30099]
[2026-02-05 20:39:35] 2026-02-06 01:39:05,726 | INFO     | zombie collector waiting for pid 30099
[2026-02-05 20:39:35] 2026-02-06 01:39:05,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 20:39:35] 2026-02-06 01:39:05,726 | INFO     | collected zombie processes
[2026-02-05 20:39:35] 2026-02-06 01:39:05,726 | INFO     | will attempt to kill all subprocesses of pid=30099
[2026-02-05 20:39:35] 2026-02-06 01:39:05,813 | INFO     | process IDs to be killed: [30099] (in reverse order)
[2026-02-05 20:39:35] 2026-02-06 01:39:05,874 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 20:39:35] 2026-02-06 01:39:05,874 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 20:39:35] 2026-02-06 01:39:05,878 | INFO     | did not find any defunct processes belonging to 30099
[2026-02-05 20:39:35] 2026-02-06 01:39:05,882 | INFO     | did not find any defunct processes belonging to 30099
[2026-02-05 20:39:35] 2026-02-06 01:39:05,882 | INFO     | ready for new job
[2026-02-05 20:39:35] 2026-02-06 01:39:05,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 20:39:35] 2026-02-06 01:39:05,884 | INFO     | **************************************
[2026-02-05 20:39:35] 2026-02-06 01:39:05,884 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 20:39:35] 2026-02-06 01:39:05,884 | INFO     | **************************************
[2026-02-05 20:39:35] 2026-02-06 01:39:05,884 | INFO     | 
[2026-02-05 20:39:35] 2026-02-06 01:39:05,885 | INFO     | architecture information:
[2026-02-05 20:39:35] 2026-02-06 01:39:05,885 | INFO     | executing command: cat /etc/os-release
[2026-02-05 20:39:35] 2026-02-06 01:39:05,904 | INFO     | cat /etc/os-release:
[2026-02-05 20:39:35] NAME="CentOS Linux"
[2026-02-05 20:39:35] VERSION="7 (Core)"
[2026-02-05 20:39:35] ID="centos"
[2026-02-05 20:39:35] ID_LIKE="rhel fedora"
[2026-02-05 20:39:35] VERSION_ID="7"
[2026-02-05 20:39:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 20:39:35] ANSI_COLOR="0;31"
[2026-02-05 20:39:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 20:39:35] HOME_URL="https://www.centos.org/"
[2026-02-05 20:39:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 20:39:35] 
[2026-02-05 20:39:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 20:39:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 20:39:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 20:39:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 20:39:35] 
[2026-02-05 20:39:35] 2026-02-06 01:39:05,904 | INFO     | **************************************
[2026-02-05 20:39:35] 2026-02-06 01:39:06,408 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-05 20:39:35] 2026-02-06 01:39:06,428 | INFO     | sufficient remaining disk space (18020827136 B)
[2026-02-05 20:39:35] 2026-02-06 01:39:06,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 20:39:35] 2026-02-06 01:39:06,429 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 20:39:35] 2026-02-06 01:39:06,429 | INFO     | update_server=False
[2026-02-05 20:39:35] 2026-02-06 01:39:06,429 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 20:39:35] 2026-02-06 01:39:06,430 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 20:39:35] 2026-02-06 01:39:06,430 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-05 20:39:35] 2026-02-06 01:39:06,431 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 20:39:35] 2026-02-06 01:39:06,431 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 20:39:35] 2026-02-06 01:39:06,431 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 20:39:35] 2026-02-06 01:39:06,475 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 20:39:35] 2026-02-06 01:39:06,476 | INFO     | aborting loop
[2026-02-05 20:39:35] 2026-02-06 01:39:06,865 | INFO     | all job control threads have been joined
[2026-02-05 20:39:35] 2026-02-06 01:39:06,983 | INFO     | all data control threads have been joined
[2026-02-05 20:39:35] 2026-02-06 01:39:07,318 | INFO     | all payload control threads have been joined
[2026-02-05 20:39:35] 2026-02-06 01:39:07,435 | INFO     | [job] queue monitor thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:07,435 | INFO     | [job] retrieve thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:07,480 | INFO     | [payload] failed_post thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:07,481 | INFO     | [job] job monitor thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:07,828 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:07,871 | INFO     | [job] control thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:07,932 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 20:39:35] 2026-02-06 01:39:07,989 | INFO     | [data] control thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:08,019 | INFO     | [payload] validate_post thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:08,108 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 20:39:35] 2026-02-06 01:39:08,113 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:08,318 | INFO     | [data] copytool_in thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:08,323 | INFO     | [payload] control thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:08,405 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:08,912 | INFO     | [job] validate thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:08,913 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:09,938 | INFO     | [data] copytool_out thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:12,114 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 20:39:35] 2026-02-06 01:39:28,652 | INFO     | [monitor] cgroup control has ended
[2026-02-05 20:39:35] 2026-02-06 01:39:30,461 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139957919188800)>', '<ExcThread(monitor, started 139956676720384)>']
[2026-02-05 20:39:35] 2026-02-06 01:39:30,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 20:39:35] 2026-02-06 01:39:30,551 | INFO     | [monitor] control thread has ended
[2026-02-05 20:39:35] 2026-02-06 01:39:35,487 | INFO     | all workflow threads have been joined
[2026-02-05 20:39:35] 2026-02-06 01:39:35,487 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 20:39:35] 2026-02-06 01:39:35,487 | INFO     | traces error code: 0
[2026-02-05 20:39:35] 2026-02-06 01:39:35,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 20:39:35] 2026-02-06 01:39:35,588 [wrapper] ==== pilot stdout END ====
[2026-02-05 20:39:35] 2026-02-06 01:39:35,593 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 20:39:35] 2026-02-06 01:39:35,598 [wrapper] pilotpid: 27716
[2026-02-05 20:39:35] 2026-02-06 01:39:35,603 [wrapper] Pilot exit status: 0
[2026-02-05 20:39:35] 2026-02-06 01:39:35,623 [wrapper] pandaids: 6986149956 6986149956
[2026-02-05 20:39:35] 2026-02-06 01:39:35,671 [wrapper] cleanup supervisor_pilot  9479 27717
[2026-02-05 20:39:35] 2026-02-06 01:39:35,676 [wrapper] Test setup, not cleaning
[2026-02-05 20:39:35] 2026-02-06 01:39:35,681 [wrapper] apfmon messages muted
[2026-02-05 20:39:35] 2026-02-06 01:39:35,686 [wrapper] ==== wrapper stdout END ====
[2026-02-05 20:39:35] 2026-02-06 01:39:35,691 [wrapper] ==== wrapper stderr END ====
[2026-02-05 20:39:35]  *** Error codes and diagnostics ***
[2026-02-05 20:39:35]     "exeErrorCode": 0,
[2026-02-05 20:39:35]     "exeErrorDiag": "",
[2026-02-05 20:39:35]     "pilotErrorCode": 0,
[2026-02-05 20:39:35]     "pilotErrorDiag": "",
[2026-02-05 20:39:35]  *** Listing of results directory ***
[2026-02-05 20:39:35] total 1154844
[2026-02-05 20:39:35] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-05 20:39:35] -rwx------ 1 boincer umatlas     36322 Jan 28 12:07 runpilot2-wrapper.sh
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas      5111 Jan 28 12:08 queuedata.json
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas    584422 Jan 28 12:08 pilot3.tar.gz
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas       100 Feb  5 16:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 20:39:35] -rwxr-xr-x 1 boincer umatlas      7986 Feb  5 16:23 run_atlas
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas       105 Feb  5 16:23 job.xml
[2026-02-05 20:39:35] -rw-r--r-- 3 boincer umatlas 496480412 Feb  5 16:23 EVNT.48317929._000041.pool.root.1
[2026-02-05 20:39:35] -rw-r--r-- 3 boincer umatlas 496480412 Feb  5 16:23 ATLAS.root_0
[2026-02-05 20:39:35] -rw-r--r-- 2 boincer umatlas     15845 Feb  5 16:23 start_atlas.sh
[2026-02-05 20:39:35] drwxrwx--x 2 boincer umatlas      4096 Feb  5 16:23 shared
[2026-02-05 20:39:35] -rw-r--r-- 2 boincer umatlas    597750 Feb  5 16:23 input.tar.gz
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas         0 Feb  5 16:23 boinc_lockfile
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas      2508 Feb  5 18:30 pandaJob.out
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas        57 Feb  5 18:31 setup.sh.local
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas   1007461 Feb  5 18:31 agis_schedconf.cvmfs.json
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas       431 Feb  5 18:31 workernode_map.json
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas      5911 Feb  5 20:36 init_data.xml
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas        96 Feb  5 20:38 pilot_heartbeat.json
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas 182720210 Feb  5 20:38 HITS.48317931._004856.pool.root.1
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas       532 Feb  5 20:38 boinc_task_state.xml
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas      1049 Feb  5 20:38 memory_monitor_summary.json
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas   1513144 Feb  5 20:38 agis_ddmendpoints.agis.ALL.json
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas    383539 Feb  5 20:38 log.48317931._004856.job.log.tgz.1
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas      6400 Feb  5 20:39 heartbeat.json
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas      8192 Feb  5 20:39 boinc_mmap_file
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas        29 Feb  5 20:39 wrapper_checkpoint.txt
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas      4548 Feb  5 20:39 pilotlog.txt
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas   1081812 Feb  5 20:39 log.48317931._004856.job.log.1
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas       357 Feb  5 20:39 output.list
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas       620 Feb  5 20:39 runtime_log
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas   1484800 Feb  5 20:39 result.tar.gz
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas       782 Feb  5 20:39 Wp0LDm4BO58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmjjGKDme6kpcm.diag
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas      9421 Feb  5 20:39 runtime_log.err
[2026-02-05 20:39:35] -rw-r--r-- 1 boincer umatlas     23106 Feb  5 20:39 stderr.txt
[2026-02-05 20:39:35] HITS file was successfully produced:
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas 182720210 Feb  5 20:38 shared/HITS.pool.root.1
[2026-02-05 20:39:35]  *** Contents of shared directory: ***
[2026-02-05 20:39:35] total 665344
[2026-02-05 20:39:35] -rw-r--r-- 3 boincer umatlas 496480412 Feb  5 16:23 ATLAS.root_0
[2026-02-05 20:39:35] -rw-r--r-- 2 boincer umatlas     15845 Feb  5 16:23 start_atlas.sh
[2026-02-05 20:39:35] -rw-r--r-- 2 boincer umatlas    597750 Feb  5 16:23 input.tar.gz
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas 182720210 Feb  5 20:38 HITS.pool.root.1
[2026-02-05 20:39:35] -rw------- 1 boincer umatlas   1484800 Feb  5 20:39 result.tar.gz
20:39:37 (23875): run_atlas exited; CPU time 57177.889922
20:39:37 (23875): called boinc_finish(0)

</stderr_txt>
]]>

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