Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:44:16 (1861959): wrapper (7.7.26015): starting
07:44:16 (1861959): wrapper: running run_atlas (--nthreads 10)
[2026-02-05 07:44:16] Arguments: --nthreads 10
[2026-02-05 07:44:16] Threads: 10
[2026-02-05 07:44:16] Checking for CVMFS
[2026-02-05 07:44:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 07:44:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 07:44:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 07:44:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 07:44:17] 2.13.3.0 10092 62439 218472 155905 0 231 28717291 40960001 8130 16776704 0 51337075 99.730 51356342 42534 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-05 07:44:17] CVMFS is ok
[2026-02-05 07:44:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 07:44:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 07:44:17] Further information can be found at the LHC@home message board.
[2026-02-05 07:44:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 07:44:17] Checking for apptainer binary...
[2026-02-05 07:44:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 07:44:17] Running /usr/bin/apptainer --version
[2026-02-05 07:44:17] apptainer version 1.4.5-2.el9
[2026-02-05 07:44:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 07:44:17] c-210-33-1.aglt2.org
[2026-02-05 07:44:17] apptainer works
[2026-02-05 07:44:17] Set ATHENA_PROC_NUMBER=10
[2026-02-05 07:44:17] Set ATHENA_CORE_NUMBER=10
[2026-02-05 07:44:17] Starting ATLAS job with PandaID=6984627657
[2026-02-05 07:44:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 09:45:51]  *** The last 200 lines of the pilot log: ***
[2026-02-05 09:45:51] 2026-02-05 14:45:03,858 | INFO     | extracted standard info from prmon json
[2026-02-05 09:45:51] 2026-02-05 14:45:03,858 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 09:45:51] 2026-02-05 14:45:03,858 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 09:45:51] 2026-02-05 14:45:03,859 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 09:45:51] 2026-02-05 14:45:03,859 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 09:45:51] 2026-02-05 14:45:03,861 | INFO     | fitting pss+swap vs Time
[2026-02-05 09:45:51] 2026-02-05 14:45:03,861 | INFO     | sum of square deviations: 522560055.2941168
[2026-02-05 09:45:51] 2026-02-05 14:45:03,862 | INFO     | sum of deviations: -20069186004.588234
[2026-02-05 09:45:51] 2026-02-05 14:45:03,862 | INFO     | mean x: 1770299092.1764705
[2026-02-05 09:45:51] 2026-02-05 14:45:03,862 | INFO     | mean y: 2695777.932773109
[2026-02-05 09:45:51] 2026-02-05 14:45:03,862 | INFO     | intersect: 67991937214.778725
[2026-02-05 09:45:51] 2026-02-05 14:45:03,862 | INFO     | chi2: 2.2249614856719715
[2026-02-05 09:45:51] 2026-02-05 14:45:03,862 | INFO     | sum of square deviations: 459423376.99122703
[2026-02-05 09:45:51] 2026-02-05 14:45:03,863 | INFO     | sum of deviations: -11165772557.175438
[2026-02-05 09:45:51] 2026-02-05 14:45:03,863 | INFO     | mean x: 1770298939.6754386
[2026-02-05 09:45:51] 2026-02-05 14:45:03,863 | INFO     | mean y: 2716640.50877193
[2026-02-05 09:45:51] 2026-02-05 14:45:03,863 | INFO     | intersect: 43027857085.20636
[2026-02-05 09:45:51] 2026-02-05 14:45:03,864 | INFO     | chi2: 1.5475499896622034
[2026-02-05 09:45:51] 2026-02-05 14:45:03,864 | INFO     | current chi2=1.5475499896622034 (change=30.445987509090738 %)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,864 | INFO     | sum of square deviations: 401595834.33027637
[2026-02-05 09:45:51] 2026-02-05 14:45:03,864 | INFO     | sum of deviations: -10237362624.1468
[2026-02-05 09:45:51] 2026-02-05 14:45:03,864 | INFO     | mean x: 1770298787.1834862
[2026-02-05 09:45:51] 2026-02-05 14:45:03,865 | INFO     | mean y: 2719092.8073394494
[2026-02-05 09:45:51] 2026-02-05 14:45:03,865 | INFO     | intersect: 45130653917.40002
[2026-02-05 09:45:51] 2026-02-05 14:45:03,865 | INFO     | chi2: 1.5442510608878426
[2026-02-05 09:45:51] 2026-02-05 14:45:03,865 | INFO     | current chi2=1.5442510608878426 (change=0.21317106370701866 %)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,865 | INFO     | right removable region: 108
[2026-02-05 09:45:51] 2026-02-05 14:45:03,865 | INFO     | sum of square deviations: 459417582.63157874
[2026-02-05 09:45:51] 2026-02-05 14:45:03,866 | INFO     | sum of deviations: -35505324703.10528
[2026-02-05 09:45:51] 2026-02-05 14:45:03,866 | INFO     | mean x: 1770299244.6842105
[2026-02-05 09:45:51] 2026-02-05 14:45:03,866 | INFO     | mean y: 2732086.2192982454
[2026-02-05 09:45:51] 2026-02-05 14:45:03,866 | INFO     | intersect: 136817368444.14105
[2026-02-05 09:45:51] 2026-02-05 14:45:03,866 | INFO     | chi2: 0.9083755582284917
[2026-02-05 09:45:51] 2026-02-05 14:45:03,866 | INFO     | current chi2=0.9083755582284917 (change=59.17342551418822 %)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,866 | INFO     | sum of square deviations: 401577534.954129
[2026-02-05 09:45:51] 2026-02-05 14:45:03,867 | INFO     | sum of deviations: -30507673527.2844
[2026-02-05 09:45:51] 2026-02-05 14:45:03,867 | INFO     | mean x: 1770299397.1926606
[2026-02-05 09:45:51] 2026-02-05 14:45:03,867 | INFO     | mean y: 2718877.3944954127
[2026-02-05 09:45:51] 2026-02-05 14:45:03,867 | INFO     | intersect: 134491606711.39948
[2026-02-05 09:45:51] 2026-02-05 14:45:03,867 | INFO     | chi2: 0.9057081498742396
[2026-02-05 09:45:51] 2026-02-05 14:45:03,867 | INFO     | current chi2=0.9057081498742396 (change=0.2936459848670981 %)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,867 | INFO     | left removable region: 20
[2026-02-05 09:45:51] 2026-02-05 14:45:03,867 | INFO     | sum of square deviations: 211325365.4545459
[2026-02-05 09:45:51] 2026-02-05 14:45:03,868 | INFO     | sum of deviations: -11081865907.363634
[2026-02-05 09:45:51] 2026-02-05 14:45:03,868 | INFO     | mean x: 1770299366.7272727
[2026-02-05 09:45:51] 2026-02-05 14:45:03,868 | INFO     | mean y: 2712323.6931818184
[2026-02-05 09:45:51] 2026-02-05 14:45:03,868 | INFO     | intersect: 92836907384.77821
[2026-02-05 09:45:51] 2026-02-05 14:45:03,868 | INFO     | chi2: 0.15052564820817974
[2026-02-05 09:45:51] 2026-02-05 14:45:03,868 | INFO     | current memory leak: -52.44 B/s (using 88 data points, chi2=0.15)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | could have reported an average CPU frequency of 3022 MHz (7 samples)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | ..............................
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | . Timing measurements:
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | . get job = 0 s
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | . initial setup = 6 s
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | . payload setup = 5 s
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | . stage-in = 0 s
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | . payload execution = 7206 s
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | . stage-out = 0 s
[2026-02-05 09:45:51] 2026-02-05 14:45:03,869 | INFO     | . log creation = 0 s
[2026-02-05 09:45:51] 2026-02-05 14:45:03,870 | INFO     | ..............................
[2026-02-05 09:45:51] 2026-02-05 14:45:03,951 | INFO     | 
[2026-02-05 09:45:51] 2026-02-05 14:45:03,951 | INFO     | job summary report
[2026-02-05 09:45:51] 2026-02-05 14:45:03,951 | INFO     | --------------------------------------------------
[2026-02-05 09:45:51] 2026-02-05 14:45:03,951 | INFO     | PanDA job id: 6984627657
[2026-02-05 09:45:51] 2026-02-05 14:45:03,951 | INFO     | task id: 48317971
[2026-02-05 09:45:51] 2026-02-05 14:45:03,951 | INFO     | errors: (none)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,951 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | pilot state: finished 
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | transexitcode: 0
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | exeerrorcode: 0
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | exeerrordiag: 
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | exitcode: 0
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | exitmsg: OK
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | cpuconsumptiontime: 45936 s
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | nevents: 400
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | neventsw: 0
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | pid: 1870118
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | pgrp: 1870118
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | corecount: 10
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | event service: False
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | sizes: {0: 2281980, 1: 2283098, 12: 2283098, 7215: 2310592, 7217: 2319590, 7220: 2319968}
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | --------------------------------------------------
[2026-02-05 09:45:51] 2026-02-05 14:45:03,952 | INFO     | 
[2026-02-05 09:45:51] 2026-02-05 14:45:03,953 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-05 09:45:51] 2026-02-05 14:45:03,973 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,973 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,973 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,973 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,973 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,973 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,973 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,974 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 09:45:51] 2026-02-05 14:45:03,975 | INFO     | job 6984627657 has completed (purged errors)
[2026-02-05 09:45:51] 2026-02-05 14:45:03,975 | INFO     | overall cleanup function is called
[2026-02-05 09:45:51] 2026-02-05 14:45:04,983 | INFO     | --- collectZombieJob: --- 10, [1870118]
[2026-02-05 09:45:51] 2026-02-05 14:45:04,983 | INFO     | zombie collector waiting for pid 1870118
[2026-02-05 09:45:51] 2026-02-05 14:45:04,984 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 09:45:51] 2026-02-05 14:45:04,984 | INFO     | collected zombie processes
[2026-02-05 09:45:51] 2026-02-05 14:45:04,984 | INFO     | will attempt to kill all subprocesses of pid=1870118
[2026-02-05 09:45:51] 2026-02-05 14:45:05,171 | INFO     | process IDs to be killed: [1870118] (in reverse order)
[2026-02-05 09:45:51] 2026-02-05 14:45:05,264 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 09:45:51] 2026-02-05 14:45:05,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 09:45:51] 2026-02-05 14:45:05,272 | INFO     | did not find any defunct processes belonging to 1870118
[2026-02-05 09:45:51] 2026-02-05 14:45:05,280 | INFO     | did not find any defunct processes belonging to 1870118
[2026-02-05 09:45:51] 2026-02-05 14:45:05,280 | INFO     | ready for new job
[2026-02-05 09:45:51] 2026-02-05 14:45:05,280 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 09:45:51] 2026-02-05 14:45:05,282 | INFO     | **************************************
[2026-02-05 09:45:51] 2026-02-05 14:45:05,282 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 09:45:51] 2026-02-05 14:45:05,282 | INFO     | **************************************
[2026-02-05 09:45:51] 2026-02-05 14:45:05,282 | INFO     | 
[2026-02-05 09:45:51] 2026-02-05 14:45:05,285 | INFO     | architecture information:
[2026-02-05 09:45:51] 2026-02-05 14:45:05,286 | INFO     | executing command: cat /etc/os-release
[2026-02-05 09:45:51] 2026-02-05 14:45:05,302 | INFO     | cat /etc/os-release:
[2026-02-05 09:45:51] NAME="CentOS Linux"
[2026-02-05 09:45:51] VERSION="7 (Core)"
[2026-02-05 09:45:51] ID="centos"
[2026-02-05 09:45:51] ID_LIKE="rhel fedora"
[2026-02-05 09:45:51] VERSION_ID="7"
[2026-02-05 09:45:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 09:45:51] ANSI_COLOR="0;31"
[2026-02-05 09:45:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 09:45:51] HOME_URL="https://www.centos.org/"
[2026-02-05 09:45:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 09:45:51] 
[2026-02-05 09:45:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 09:45:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 09:45:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 09:45:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 09:45:51] 
[2026-02-05 09:45:51] 2026-02-05 14:45:05,302 | INFO     | **************************************
[2026-02-05 09:45:51] 2026-02-05 14:45:05,707 | WARNING  | process 1870118 can no longer be monitored (due to stat problems) - aborting
[2026-02-05 09:45:51] 2026-02-05 14:45:05,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-05 09:45:51] 2026-02-05 14:45:05,816 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 09:45:51] 2026-02-05 14:45:05,821 | INFO     | sufficient remaining disk space (74849452032 B)
[2026-02-05 09:45:51] 2026-02-05 14:45:05,822 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 09:45:51] 2026-02-05 14:45:05,822 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 09:45:51] 2026-02-05 14:45:05,822 | INFO     | update_server=False
[2026-02-05 09:45:51] 2026-02-05 14:45:05,822 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 09:45:51] 2026-02-05 14:45:05,823 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 09:45:51] 2026-02-05 14:45:05,977 | INFO     | number of running child processes to parent process 1870118: 1
[2026-02-05 09:45:51] 2026-02-05 14:45:05,977 | INFO     | maximum number of monitored processes: 6
[2026-02-05 09:45:51] 2026-02-05 14:45:05,977 | INFO     | aborting job monitoring since job object (job id=6984627657) has expired
[2026-02-05 09:45:51] 2026-02-05 14:45:05,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 09:45:51] 2026-02-05 14:45:05,978 | INFO     | will abort loop
[2026-02-05 09:45:51] 2026-02-05 14:45:06,155 | INFO     | all payload control threads have been joined
[2026-02-05 09:45:51] 2026-02-05 14:45:06,194 | INFO     | all data control threads have been joined
[2026-02-05 09:45:51] 2026-02-05 14:45:06,629 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 09:45:51] 2026-02-05 14:45:06,828 | INFO     | [job] retrieve thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:06,828 | INFO     | [job] queue monitor thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:06,982 | INFO     | [job] job monitor thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:06,994 | INFO     | [payload] failed_post thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:07,161 | INFO     | [payload] control thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:07,200 | INFO     | [data] control thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:07,357 | INFO     | [job] validate thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:07,367 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:07,454 | INFO     | all job control threads have been joined
[2026-02-05 09:45:51] 2026-02-05 14:45:07,626 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:07,698 | INFO     | [data] copytool_in thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:07,707 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:08,035 | INFO     | [payload] validate_post thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:08,039 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:08,459 | INFO     | [job] control thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:08,633 | INFO     | [data] copytool_out thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:09,176 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 09:45:51] 2026-02-05 14:45:13,181 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 09:45:51] 2026-02-05 14:45:36,034 | INFO     | PID=1865687 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 09:45:51] 2026-02-05 14:45:36,034 | INFO     | .. there are 8 such processes running
[2026-02-05 09:45:51] 2026-02-05 14:45:36,035 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 09:45:51] 2026-02-05 14:45:36,035 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 09:45:51] 2026-02-05 14:45:36,035 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 09:45:51] 2026-02-05 14:45:43,856 | INFO     | [monitor] cgroup control has ended
[2026-02-05 09:45:51] 2026-02-05 14:45:45,877 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712244156224)>', '<ExcThread(monitor, started 140711869519616)>']
[2026-02-05 09:45:51] 2026-02-05 14:45:46,074 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 09:45:51] 2026-02-05 14:45:46,074 | INFO     | [monitor] control thread has ended
[2026-02-05 09:45:51] 2026-02-05 14:45:50,902 | INFO     | all workflow threads have been joined
[2026-02-05 09:45:51] 2026-02-05 14:45:50,902 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 09:45:51] 2026-02-05 14:45:50,903 | INFO     | traces error code: 0
[2026-02-05 09:45:51] 2026-02-05 14:45:50,903 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 09:45:51] 2026-02-05 14:45:51,040 [wrapper] ==== pilot stdout END ====
[2026-02-05 09:45:51] 2026-02-05 14:45:51,043 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 09:45:51] 2026-02-05 14:45:51,046 [wrapper] pilotpid: 1865687
[2026-02-05 09:45:51] 2026-02-05 14:45:51,049 [wrapper] Pilot exit status: 0
[2026-02-05 09:45:51] 2026-02-05 14:45:51,060 [wrapper] pandaids: 6984627657
[2026-02-05 09:45:51] 2026-02-05 14:45:51,109 [wrapper] cleanup supervisor_pilot 2081541 1865688
[2026-02-05 09:45:51] 2026-02-05 14:45:51,112 [wrapper] Test setup, not cleaning
[2026-02-05 09:45:51] 2026-02-05 14:45:51,116 [wrapper] apfmon messages muted
[2026-02-05 09:45:51] 2026-02-05 14:45:51,119 [wrapper] ==== wrapper stdout END ====
[2026-02-05 09:45:51] 2026-02-05 14:45:51,122 [wrapper] ==== wrapper stderr END ====
[2026-02-05 09:45:51]  *** Error codes and diagnostics ***
[2026-02-05 09:45:51]     "exeErrorCode": 0,
[2026-02-05 09:45:51]     "exeErrorDiag": "",
[2026-02-05 09:45:51]     "pilotErrorCode": 0,
[2026-02-05 09:45:51]     "pilotErrorDiag": "",
[2026-02-05 09:45:51]  *** Listing of results directory ***
[2026-02-05 09:45:51] total 723308
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 07:08 pilot3.tar.gz
[2026-02-05 09:45:51] -rwx------. 1 boincer umatlas     36322 Jan 28 07:10 runpilot2-wrapper.sh
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 07:11 queuedata.json
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas       100 Feb  5 07:44 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 09:45:51] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  5 07:44 run_atlas
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas       105 Feb  5 07:44 job.xml
[2026-02-05 09:45:51] -rw-r--r--. 2 boincer umatlas 532024045 Feb  5 07:44 EVNT.48317969._000044.pool.root.1
[2026-02-05 09:45:51] -rw-r--r--. 2 boincer umatlas     15845 Feb  5 07:44 start_atlas.sh
[2026-02-05 09:45:51] drwxrwx--x. 2 boincer umatlas      4096 Feb  5 07:44 shared
[2026-02-05 09:45:51] -rw-r--r--. 2 boincer umatlas    597765 Feb  5 07:44 input.tar.gz
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas         0 Feb  5 07:44 boinc_lockfile
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas      2513 Feb  5 07:44 pandaJob.out
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas        57 Feb  5 07:44 setup.sh.local
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas   1009524 Feb  5 07:44 agis_schedconf.cvmfs.json
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas   1513144 Feb  5 07:44 agis_ddmendpoints.agis.ALL.json
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas       443 Feb  5 07:44 workernode_map.json
[2026-02-05 09:45:51] drwx------. 5 boincer umatlas      4096 Feb  5 07:44 pilot3
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas      6841 Feb  5 09:39 init_data.xml
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas 201818698 Feb  5 09:44 HITS.48317971._001306.pool.root.1
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas       530 Feb  5 09:44 boinc_task_state.xml
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas      1038 Feb  5 09:44 memory_monitor_summary.json
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas    428415 Feb  5 09:45 log.48317971._001306.job.log.tgz.1
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas      6389 Feb  5 09:45 heartbeat.json
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas        95 Feb  5 09:45 pilot_heartbeat.json
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas      8192 Feb  5 09:45 boinc_mmap_file
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas        27 Feb  5 09:45 wrapper_checkpoint.txt
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas      5340 Feb  5 09:45 pilotlog.txt
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas   1012886 Feb  5 09:45 log.48317971._001306.job.log.1
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas       357 Feb  5 09:45 output.list
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas       620 Feb  5 09:45 runtime_log
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas   1454080 Feb  5 09:45 result.tar.gz
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas       655 Feb  5 09:45 XGGMDmKYJ58n9Rq4apOajLDm4fhM0noT9bVooX4SDmSUFKDm6w3KOo.diag
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas      9353 Feb  5 09:45 runtime_log.err
[2026-02-05 09:45:51] -rw-r--r--. 1 boincer umatlas     21152 Feb  5 09:45 stderr.txt
[2026-02-05 09:45:51] HITS file was successfully produced:
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas 201818698 Feb  5 09:44 shared/HITS.pool.root.1
[2026-02-05 09:45:51]  *** Contents of shared directory: ***
[2026-02-05 09:45:51] total 718676
[2026-02-05 09:45:51] -rw-r--r--. 2 boincer umatlas 532024045 Feb  5 07:44 ATLAS.root_0
[2026-02-05 09:45:51] -rw-r--r--. 2 boincer umatlas     15845 Feb  5 07:44 start_atlas.sh
[2026-02-05 09:45:51] -rw-r--r--. 2 boincer umatlas    597765 Feb  5 07:44 input.tar.gz
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas 201818698 Feb  5 09:44 HITS.pool.root.1
[2026-02-05 09:45:51] -rw-------. 1 boincer umatlas   1454080 Feb  5 09:45 result.tar.gz
09:45:52 (1861959): run_atlas exited; CPU time 46061.720286
09:45:52 (1861959): called boinc_finish(0)

</stderr_txt>
]]>

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