Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:16:12 (2213142): wrapper (7.7.26015): starting
05:16:12 (2213142): wrapper: running run_atlas (--nthreads 9)
[2026-02-05 05:16:12] Arguments: --nthreads 9
[2026-02-05 05:16:12] Threads: 9
[2026-02-05 05:16:12] Checking for CVMFS
[2026-02-05 05:16:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 05:16:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 05:16:12] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 05:16:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 05:16:13] 2.13.3.0 12161 132158 357576 155899 0 328 34679948 40960001 13244 16776704 0 347229221 99.558 406843015 37889 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-05 05:16:13] CVMFS is ok
[2026-02-05 05:16:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 05:16:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 05:16:13] Further information can be found at the LHC@home message board.
[2026-02-05 05:16:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 05:16:13] Checking for apptainer binary...
[2026-02-05 05:16:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 05:16:13] Running /usr/bin/apptainer --version
[2026-02-05 05:16:13] apptainer version 1.4.5-2.el9
[2026-02-05 05:16:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 05:16:13] c6-5-7-1.aglt2.org
[2026-02-05 05:16:13] apptainer works
[2026-02-05 05:16:13] Set ATHENA_PROC_NUMBER=9
[2026-02-05 05:16:13] Set ATHENA_CORE_NUMBER=9
[2026-02-05 05:16:13] Starting ATLAS job with PandaID=6992965146
[2026-02-05 05:16:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 07:51:05]  *** The last 200 lines of the pilot log: ***
[2026-02-05 07:51:05] 2026-02-05 12:50:24,918 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 07:51:05] 2026-02-05 12:50:24,918 | INFO     | log transfer has been attempted: DONE
[2026-02-05 07:51:05] 2026-02-05 12:50:24,918 | INFO     | job 6992965146 has finished - writing final server update
[2026-02-05 07:51:05] 2026-02-05 12:50:24,918 | INFO     | total number of processed events: 400 (read)
[2026-02-05 07:51:05] 2026-02-05 12:50:24,927 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6992965146/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 07:51:05] 2026-02-05 12:50:24,927 | INFO     | extracted standard info from prmon json
[2026-02-05 07:51:05] 2026-02-05 12:50:24,928 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 07:51:05] 2026-02-05 12:50:24,928 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 07:51:05] 2026-02-05 12:50:24,928 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 07:51:05] 2026-02-05 12:50:24,928 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 07:51:05] 2026-02-05 12:50:24,930 | INFO     | fitting pss+swap vs Time
[2026-02-05 07:51:05] 2026-02-05 12:50:24,931 | INFO     | sum of square deviations: 1067449767.8675494
[2026-02-05 07:51:05] 2026-02-05 12:50:24,932 | INFO     | sum of deviations: -13549710155.331131
[2026-02-05 07:51:05] 2026-02-05 12:50:24,932 | INFO     | mean x: 1770291198.2715232
[2026-02-05 07:51:05] 2026-02-05 12:50:24,932 | INFO     | mean y: 2716030.178807947
[2026-02-05 07:51:05] 2026-02-05 12:50:24,932 | INFO     | intersect: 22473967932.768856
[2026-02-05 07:51:05] 2026-02-05 12:50:24,932 | INFO     | chi2: 2.148283741183386
[2026-02-05 07:51:05] 2026-02-05 12:50:24,932 | INFO     | sum of square deviations: 964883604.9863008
[2026-02-05 07:51:05] 2026-02-05 12:50:24,933 | INFO     | sum of deviations: -12525641223.232876
[2026-02-05 07:51:05] 2026-02-05 12:50:24,933 | INFO     | mean x: 1770291045.7808218
[2026-02-05 07:51:05] 2026-02-05 12:50:24,933 | INFO     | mean y: 2717553.2739726026
[2026-02-05 07:51:05] 2026-02-05 12:50:24,933 | INFO     | intersect: 22983759396.623688
[2026-02-05 07:51:05] 2026-02-05 12:50:24,933 | INFO     | chi2: 2.1470294675196
[2026-02-05 07:51:05] 2026-02-05 12:50:24,934 | INFO     | current chi2=2.1470294675196 (change=0.05838491628181304 %)
[2026-02-05 07:51:05] 2026-02-05 12:50:24,934 | INFO     | right removable region: 145
[2026-02-05 07:51:05] 2026-02-05 12:50:24,934 | INFO     | sum of square deviations: 964858594.9863008
[2026-02-05 07:51:05] 2026-02-05 12:50:24,934 | INFO     | sum of deviations: -43675141674.93152
[2026-02-05 07:51:05] 2026-02-05 12:50:24,934 | INFO     | mean x: 1770291350.7808218
[2026-02-05 07:51:05] 2026-02-05 12:50:24,935 | INFO     | mean y: 2760315.595890411
[2026-02-05 07:51:05] 2026-02-05 12:50:24,935 | INFO     | intersect: 80136497998.01353
[2026-02-05 07:51:05] 2026-02-05 12:50:24,935 | INFO     | chi2: 0.3121544151983266
[2026-02-05 07:51:05] 2026-02-05 12:50:24,935 | INFO     | current chi2=0.3121544151983266 (change=85.46959094768478 %)
[2026-02-05 07:51:05] 2026-02-05 12:50:24,935 | INFO     | sum of square deviations: 869058247.0780146
[2026-02-05 07:51:05] 2026-02-05 12:50:24,936 | INFO     | sum of deviations: -44982599657.36171
[2026-02-05 07:51:05] 2026-02-05 12:50:24,936 | INFO     | mean x: 1770291503.29078
[2026-02-05 07:51:05] 2026-02-05 12:50:24,936 | INFO     | mean y: 2762312.1063829786
[2026-02-05 07:51:05] 2026-02-05 12:50:24,936 | INFO     | intersect: 91633345460.1306
[2026-02-05 07:51:05] 2026-02-05 12:50:24,936 | INFO     | chi2: 0.25944510710085533
[2026-02-05 07:51:05] 2026-02-05 12:50:24,936 | INFO     | current chi2=0.25944510710085533 (change=16.885651950167844 %)
[2026-02-05 07:51:05] 2026-02-05 12:50:24,936 | INFO     | left removable region: 20
[2026-02-05 07:51:05] 2026-02-05 12:50:24,936 | INFO     | sum of square deviations: 605469070.8320014
[2026-02-05 07:51:05] 2026-02-05 12:50:24,937 | INFO     | sum of deviations: -33329632136.240005
[2026-02-05 07:51:05] 2026-02-05 12:50:24,937 | INFO     | mean x: 1770291625.312
[2026-02-05 07:51:05] 2026-02-05 12:50:24,937 | INFO     | mean y: 2748180.16
[2026-02-05 07:51:05] 2026-02-05 12:50:24,937 | INFO     | intersect: 97453091208.31264
[2026-02-05 07:51:05] 2026-02-05 12:50:24,937 | INFO     | chi2: 0.24419369742651575
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | current memory leak: -55.05 B/s (using 125 data points, chi2=0.24)
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | could have reported an average CPU frequency of 2718 MHz (9 samples)
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | ..............................
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | . Timing measurements:
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | . get job = 0 s
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | . initial setup = 13 s
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | . payload setup = 9 s
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | . stage-in = 0 s
[2026-02-05 07:51:05] 2026-02-05 12:50:24,938 | INFO     | . payload execution = 9203 s
[2026-02-05 07:51:05] 2026-02-05 12:50:24,939 | INFO     | . stage-out = 0 s
[2026-02-05 07:51:05] 2026-02-05 12:50:24,939 | INFO     | . log creation = 0 s
[2026-02-05 07:51:05] 2026-02-05 12:50:24,939 | INFO     | ..............................
[2026-02-05 07:51:05] 2026-02-05 12:50:24,996 | INFO     | time since job start (9220s) is within the limit (349056.0s)
[2026-02-05 07:51:05] 2026-02-05 12:50:25,015 | INFO     | 
[2026-02-05 07:51:05] 2026-02-05 12:50:25,015 | INFO     | job summary report
[2026-02-05 07:51:05] 2026-02-05 12:50:25,015 | INFO     | --------------------------------------------------
[2026-02-05 07:51:05] 2026-02-05 12:50:25,015 | INFO     | PanDA job id: 6992965146
[2026-02-05 07:51:05] 2026-02-05 12:50:25,015 | INFO     | task id: 48431096
[2026-02-05 07:51:05] 2026-02-05 12:50:25,015 | INFO     | errors: (none)
[2026-02-05 07:51:05] 2026-02-05 12:50:25,015 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | pilot state: finished 
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | transexitcode: 0
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | exeerrorcode: 0
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | exeerrordiag: 
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | exitcode: 0
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | exitmsg: OK
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | cpuconsumptiontime: 58122 s
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | nevents: 400
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | neventsw: 0
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | pid: 2221301
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | pgrp: 2221301
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | corecount: 9
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | event service: False
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | sizes: {0: 2282692, 1: 2283153, 2: 2283153, 9216: 2311539, 9217: 2320537, 9219: 2320979}
[2026-02-05 07:51:05] 2026-02-05 12:50:25,016 | INFO     | --------------------------------------------------
[2026-02-05 07:51:05] 2026-02-05 12:50:25,017 | INFO     | 
[2026-02-05 07:51:05] 2026-02-05 12:50:25,017 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-05 07:51:05] 2026-02-05 12:50:25,035 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,036 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,036 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,036 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,036 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,036 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,037 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,038 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 07:51:05] 2026-02-05 12:50:25,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,038 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 07:51:05] 2026-02-05 12:50:25,038 | INFO     | job 6992965146 has completed (purged errors)
[2026-02-05 07:51:05] 2026-02-05 12:50:25,038 | INFO     | overall cleanup function is called
[2026-02-05 07:51:05] 2026-02-05 12:50:26,047 | INFO     | --- collectZombieJob: --- 10, [2221301]
[2026-02-05 07:51:05] 2026-02-05 12:50:26,047 | INFO     | zombie collector waiting for pid 2221301
[2026-02-05 07:51:05] 2026-02-05 12:50:26,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 07:51:05] 2026-02-05 12:50:26,048 | INFO     | collected zombie processes
[2026-02-05 07:51:05] 2026-02-05 12:50:26,048 | INFO     | will attempt to kill all subprocesses of pid=2221301
[2026-02-05 07:51:05] 2026-02-05 12:50:26,117 | WARNING  | process 2221301 can no longer be monitored (due to stat problems) - aborting
[2026-02-05 07:51:05] 2026-02-05 12:50:26,755 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 07:51:05] 2026-02-05 12:50:26,758 | INFO     | process IDs to be killed: [2221301] (in reverse order)
[2026-02-05 07:51:05] 2026-02-05 12:50:26,853 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 07:51:05] 2026-02-05 12:50:26,853 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 07:51:05] 2026-02-05 12:50:26,883 | INFO     | did not find any defunct processes belonging to 2221301
[2026-02-05 07:51:05] 2026-02-05 12:50:26,914 | INFO     | did not find any defunct processes belonging to 2221301
[2026-02-05 07:51:05] 2026-02-05 12:50:26,914 | INFO     | ready for new job
[2026-02-05 07:51:05] 2026-02-05 12:50:26,915 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 07:51:05] 2026-02-05 12:50:26,916 | INFO     | **************************************
[2026-02-05 07:51:05] 2026-02-05 12:50:26,917 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 07:51:05] 2026-02-05 12:50:26,917 | INFO     | **************************************
[2026-02-05 07:51:05] 2026-02-05 12:50:26,917 | INFO     | 
[2026-02-05 07:51:05] 2026-02-05 12:50:26,920 | INFO     | architecture information:
[2026-02-05 07:51:05] 2026-02-05 12:50:26,921 | INFO     | executing command: cat /etc/os-release
[2026-02-05 07:51:05] 2026-02-05 12:50:26,935 | INFO     | cat /etc/os-release:
[2026-02-05 07:51:05] NAME="CentOS Linux"
[2026-02-05 07:51:05] VERSION="7 (Core)"
[2026-02-05 07:51:05] ID="centos"
[2026-02-05 07:51:05] ID_LIKE="rhel fedora"
[2026-02-05 07:51:05] VERSION_ID="7"
[2026-02-05 07:51:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 07:51:05] ANSI_COLOR="0;31"
[2026-02-05 07:51:05] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 07:51:05] HOME_URL="https://www.centos.org/"
[2026-02-05 07:51:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 07:51:05] 
[2026-02-05 07:51:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 07:51:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 07:51:05] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 07:51:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 07:51:05] 
[2026-02-05 07:51:05] 2026-02-05 12:50:26,935 | INFO     | **************************************
[2026-02-05 07:51:05] 2026-02-05 12:50:27,102 | INFO     | number of running child processes to parent process 2221301: 1
[2026-02-05 07:51:05] 2026-02-05 12:50:27,102 | INFO     | maximum number of monitored processes: 6
[2026-02-05 07:51:05] 2026-02-05 12:50:27,102 | INFO     | aborting job monitoring since job object (job id=6992965146) has expired
[2026-02-05 07:51:05] 2026-02-05 12:50:27,437 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-05 07:51:05] 2026-02-05 12:50:27,451 | INFO     | sufficient remaining disk space (74468818944 B)
[2026-02-05 07:51:05] 2026-02-05 12:50:27,451 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 07:51:05] 2026-02-05 12:50:27,452 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 07:51:05] 2026-02-05 12:50:27,452 | INFO     | update_server=False
[2026-02-05 07:51:05] 2026-02-05 12:50:27,452 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 07:51:05] 2026-02-05 12:50:27,452 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 07:51:05] 2026-02-05 12:50:27,453 | INFO     | will abort loop
[2026-02-05 07:51:05] 2026-02-05 12:50:27,791 | INFO     | all job control threads have been joined
[2026-02-05 07:51:05] 2026-02-05 12:50:28,228 | INFO     | all data control threads have been joined
[2026-02-05 07:51:05] 2026-02-05 12:50:28,381 | INFO     | all payload control threads have been joined
[2026-02-05 07:51:05] 2026-02-05 12:50:28,457 | INFO     | [job] job monitor thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:28,458 | INFO     | [job] retrieve thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:28,583 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 07:51:05] 2026-02-05 12:50:28,717 | INFO     | [job] validate thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:28,796 | INFO     | [job] control thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:28,935 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:29,141 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:29,233 | INFO     | [data] control thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:29,242 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:29,385 | INFO     | [payload] control thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:29,427 | INFO     | [payload] validate_post thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:29,576 | INFO     | [data] copytool_in thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:29,695 | INFO     | [payload] failed_post thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:30,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 07:51:05] 2026-02-05 12:50:30,584 | INFO     | [data] copytool_out thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:30,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 07:51:05] 2026-02-05 12:50:31,030 | INFO     | [job] queue monitor thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:34,924 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:37,691 | INFO     | job.realtimelogging is not enabled
[2026-02-05 07:51:05] 2026-02-05 12:50:38,696 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 07:51:05] 2026-02-05 12:50:58,400 | INFO     | PID=2216912 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 07:51:05] 2026-02-05 12:50:58,400 | INFO     | .. there are 15 such processes running
[2026-02-05 07:51:05] 2026-02-05 12:50:58,400 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 07:51:05] 2026-02-05 12:50:58,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 07:51:05] 2026-02-05 12:50:58,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 07:51:05] 2026-02-05 12:50:59,425 | INFO     | [monitor] cgroup control has ended
[2026-02-05 07:51:05] 2026-02-05 12:50:59,804 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139692238997312)>', '<ExcThread(monitor, started 139691881895680)>']
[2026-02-05 07:51:05] 2026-02-05 12:51:00,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 07:51:05] 2026-02-05 12:51:00,405 | INFO     | [monitor] control thread has ended
[2026-02-05 07:51:05] 2026-02-05 12:51:04,829 | INFO     | all workflow threads have been joined
[2026-02-05 07:51:05] 2026-02-05 12:51:04,829 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 07:51:05] 2026-02-05 12:51:04,829 | INFO     | traces error code: 0
[2026-02-05 07:51:05] 2026-02-05 12:51:04,829 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 07:51:05] 2026-02-05 12:51:04,933 [wrapper] ==== pilot stdout END ====
[2026-02-05 07:51:05] 2026-02-05 12:51:04,935 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 07:51:05] 2026-02-05 12:51:04,937 [wrapper] pilotpid: 2216912
[2026-02-05 07:51:05] 2026-02-05 12:51:04,938 [wrapper] Pilot exit status: 0
[2026-02-05 07:51:05] 2026-02-05 12:51:04,947 [wrapper] pandaids: 6992965146
[2026-02-05 07:51:05] 2026-02-05 12:51:04,995 [wrapper] cleanup supervisor_pilot 2609217 2216913
[2026-02-05 07:51:05] 2026-02-05 12:51:04,998 [wrapper] Test setup, not cleaning
[2026-02-05 07:51:05] 2026-02-05 12:51:05,000 [wrapper] apfmon messages muted
[2026-02-05 07:51:05] 2026-02-05 12:51:05,002 [wrapper] ==== wrapper stdout END ====
[2026-02-05 07:51:05] 2026-02-05 12:51:05,005 [wrapper] ==== wrapper stderr END ====
[2026-02-05 07:51:05]  *** Error codes and diagnostics ***
[2026-02-05 07:51:05]     "exeErrorCode": 0,
[2026-02-05 07:51:05]     "exeErrorDiag": "",
[2026-02-05 07:51:05]     "pilotErrorCode": 0,
[2026-02-05 07:51:05]     "pilotErrorDiag": "",
[2026-02-05 07:51:05]  *** Listing of results directory ***
[2026-02-05 07:51:05] total 950112
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas    584422 Jan 30 00:11 pilot3.tar.gz
[2026-02-05 07:51:05] -rwx------. 1 boincer umatlas     36322 Jan 30 00:15 runpilot2-wrapper.sh
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas      5111 Jan 30 00:18 queuedata.json
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas       100 Feb  5 05:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 07:51:05] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  5 05:16 run_atlas
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas       105 Feb  5 05:16 job.xml
[2026-02-05 07:51:05] -rw-r--r--. 2 boincer umatlas 679940585 Feb  5 05:16 EVNT.48431094._000014.pool.root.1
[2026-02-05 07:51:05] -rw-r--r--. 2 boincer umatlas     15845 Feb  5 05:16 start_atlas.sh
[2026-02-05 07:51:05] drwxrwx--x. 2 boincer umatlas      4096 Feb  5 05:16 shared
[2026-02-05 07:51:05] -rw-r--r--. 2 boincer umatlas    597760 Feb  5 05:16 input.tar.gz
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas         0 Feb  5 05:16 boinc_lockfile
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas      2550 Feb  5 05:16 pandaJob.out
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas        57 Feb  5 05:16 setup.sh.local
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas   1009520 Feb  5 05:16 agis_schedconf.cvmfs.json
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas   1513144 Feb  5 05:16 agis_ddmendpoints.agis.ALL.json
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas       441 Feb  5 05:16 workernode_map.json
[2026-02-05 07:51:05] drwx------. 5 boincer umatlas      4096 Feb  5 05:16 pilot3
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas      6841 Feb  5 07:48 init_data.xml
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas 285596750 Feb  5 07:49 HITS.48431096._000682.pool.root.1
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas       530 Feb  5 07:49 boinc_task_state.xml
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas      1042 Feb  5 07:50 memory_monitor_summary.json
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas        95 Feb  5 07:50 pilot_heartbeat.json
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas    430218 Feb  5 07:50 log.48431096._000682.job.log.tgz.1
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas      6389 Feb  5 07:50 heartbeat.json
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas      8192 Feb  5 07:50 boinc_mmap_file
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas        27 Feb  5 07:50 wrapper_checkpoint.txt
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas      5182 Feb  5 07:51 pilotlog.txt
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas   1284777 Feb  5 07:51 log.48431096._000682.job.log.1
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas       357 Feb  5 07:51 output.list
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas       620 Feb  5 07:51 runtime_log
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas   1730560 Feb  5 07:51 result.tar.gz
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas      9341 Feb  5 07:51 runtime_log.err
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas       653 Feb  5 07:51 2HRLDm21v58n9Rq4apOajLDm4fhM0noT9bVooX4SDmGQKKDmjoiwTn.diag
[2026-02-05 07:51:05] -rw-r--r--. 1 boincer umatlas     21296 Feb  5 07:51 stderr.txt
[2026-02-05 07:51:05] HITS file was successfully produced:
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas 285596750 Feb  5 07:49 shared/HITS.pool.root.1
[2026-02-05 07:51:05]  *** Contents of shared directory: ***
[2026-02-05 07:51:05] total 945212
[2026-02-05 07:51:05] -rw-r--r--. 2 boincer umatlas 679940585 Feb  5 05:16 ATLAS.root_0
[2026-02-05 07:51:05] -rw-r--r--. 2 boincer umatlas     15845 Feb  5 05:16 start_atlas.sh
[2026-02-05 07:51:05] -rw-r--r--. 2 boincer umatlas    597760 Feb  5 05:16 input.tar.gz
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas 285596750 Feb  5 07:49 HITS.pool.root.1
[2026-02-05 07:51:05] -rw-------. 1 boincer umatlas   1730560 Feb  5 07:51 result.tar.gz
07:51:06 (2213142): run_atlas exited; CPU time 58300.946709
07:51:06 (2213142): called boinc_finish(0)

</stderr_txt>
]]>

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