Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:28:43 (1828845): wrapper (7.7.26015): starting
02:28:43 (1828845): wrapper: running run_atlas (--nthreads 8)
[2026-02-05 02:28:43] Arguments: --nthreads 8
[2026-02-05 02:28:43] Threads: 8
[2026-02-05 02:28:43] Checking for CVMFS
[2026-02-05 02:28:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 02:28:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 02:28:44] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 02:28:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 02:28:44] 2.13.3.0 10021 60093 163188 155893 3 328 30423488 39288832 6610 16776704 0 29590455 99.476 45116547 39844 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-05 02:28:44] CVMFS is ok
[2026-02-05 02:28:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 02:28:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 02:28:44] Further information can be found at the LHC@home message board.
[2026-02-05 02:28:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 02:28:44] Checking for apptainer binary...
[2026-02-05 02:28:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 02:28:44] Running /usr/bin/apptainer --version
[2026-02-05 02:28:44] apptainer version 1.4.5-2.el9
[2026-02-05 02:28:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 02:28:44] c-211-4.aglt2.org
[2026-02-05 02:28:44] apptainer works
[2026-02-05 02:28:44] Set ATHENA_PROC_NUMBER=8
[2026-02-05 02:28:44] Set ATHENA_CORE_NUMBER=8
[2026-02-05 02:28:44] Starting ATLAS job with PandaID=6990591456
[2026-02-05 02:28:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 04:55:23]  *** The last 200 lines of the pilot log: ***
[2026-02-05 04:55:23] 2026-02-05 09:54:41,587 | INFO     | PID=1832570 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-05 04:55:23] 2026-02-05 09:54:41,588 | INFO     | .. there are 6 such processes running
[2026-02-05 04:55:23] 2026-02-05 09:54:41,897 | INFO     | job 6990591456 has state=finished
[2026-02-05 04:55:23] 2026-02-05 09:54:41,897 | INFO     | preparing for final server update for job 6990591456 in state='finished'
[2026-02-05 04:55:23] 2026-02-05 09:54:41,897 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6990591456/jobReport.json
[2026-02-05 04:55:23] 2026-02-05 09:54:41,900 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-05 04:55:23] 2026-02-05 09:54:41,901 | INFO     | this job has now completed (state=finished)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,905 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,905 | INFO     | log transfer has been attempted: DONE
[2026-02-05 04:55:23] 2026-02-05 09:54:41,905 | INFO     | job 6990591456 has finished - writing final server update
[2026-02-05 04:55:23] 2026-02-05 09:54:41,906 | INFO     | total number of processed events: 400 (read)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,915 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6990591456/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,916 | INFO     | extracted standard info from prmon json
[2026-02-05 04:55:23] 2026-02-05 09:54:41,916 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 04:55:23] 2026-02-05 09:54:41,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 04:55:23] 2026-02-05 09:54:41,921 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 04:55:23] 2026-02-05 09:54:41,921 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 04:55:23] 2026-02-05 09:54:41,924 | INFO     | fitting pss+swap vs Time
[2026-02-05 04:55:23] 2026-02-05 09:54:41,924 | INFO     | sum of square deviations: 906682908.97902
[2026-02-05 04:55:23] 2026-02-05 09:54:41,925 | INFO     | sum of deviations: -28987426701.391594
[2026-02-05 04:55:23] 2026-02-05 09:54:41,925 | INFO     | mean x: 1770280896.1188812
[2026-02-05 04:55:23] 2026-02-05 09:54:41,925 | INFO     | mean y: 2658537.5524475523
[2026-02-05 04:55:23] 2026-02-05 09:54:41,925 | INFO     | intersect: 56600050204.39736
[2026-02-05 04:55:23] 2026-02-05 09:54:41,926 | INFO     | chi2: 1.7628609677469644
[2026-02-05 04:55:23] 2026-02-05 09:54:41,926 | INFO     | sum of square deviations: 814854392.6449295
[2026-02-05 04:55:23] 2026-02-05 09:54:41,927 | INFO     | sum of deviations: -26903323793.623188
[2026-02-05 04:55:23] 2026-02-05 09:54:41,927 | INFO     | mean x: 1770280743.615942
[2026-02-05 04:55:23] 2026-02-05 09:54:41,927 | INFO     | mean y: 2662000.1014492754
[2026-02-05 04:55:23] 2026-02-05 09:54:41,927 | INFO     | intersect: 58450449090.658134
[2026-02-05 04:55:23] 2026-02-05 09:54:41,927 | INFO     | chi2: 1.7582533767073232
[2026-02-05 04:55:23] 2026-02-05 09:54:41,927 | INFO     | current chi2=1.7582533767073232 (change=0.26137007534576123 %)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,927 | INFO     | right removable region: 137
[2026-02-05 04:55:23] 2026-02-05 09:54:41,928 | INFO     | sum of square deviations: 814852746.405798
[2026-02-05 04:55:23] 2026-02-05 09:54:41,928 | INFO     | sum of deviations: -50531232504.27535
[2026-02-05 04:55:23] 2026-02-05 09:54:41,929 | INFO     | mean x: 1770281048.6231885
[2026-02-05 04:55:23] 2026-02-05 09:54:41,929 | INFO     | mean y: 2693694.3985507246
[2026-02-05 04:55:23] 2026-02-05 09:54:41,929 | INFO     | intersect: 109782630818.57465
[2026-02-05 04:55:23] 2026-02-05 09:54:41,929 | INFO     | chi2: 0.26748376170325355
[2026-02-05 04:55:23] 2026-02-05 09:54:41,929 | INFO     | current chi2=0.26748376170325355 (change=84.8267239108985 %)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,929 | INFO     | sum of square deviations: 729449848.0751848
[2026-02-05 04:55:23] 2026-02-05 09:54:41,930 | INFO     | sum of deviations: -47084220851.81205
[2026-02-05 04:55:23] 2026-02-05 09:54:41,930 | INFO     | mean x: 1770281201.1203008
[2026-02-05 04:55:23] 2026-02-05 09:54:41,930 | INFO     | mean y: 2687460.30075188
[2026-02-05 04:55:23] 2026-02-05 09:54:41,930 | INFO     | intersect: 114270051095.1043
[2026-02-05 04:55:23] 2026-02-05 09:54:41,931 | INFO     | chi2: 0.2534147182070987
[2026-02-05 04:55:23] 2026-02-05 09:54:41,931 | INFO     | current chi2=0.2534147182070987 (change=5.259774801493572 %)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,931 | INFO     | left removable region: 20
[2026-02-05 04:55:23] 2026-02-05 09:54:41,931 | INFO     | sum of square deviations: 496570878.3247859
[2026-02-05 04:55:23] 2026-02-05 09:54:41,937 | INFO     | sum of deviations: -33538275309.58117
[2026-02-05 04:55:23] 2026-02-05 09:54:41,937 | INFO     | mean x: 1770281323.1196582
[2026-02-05 04:55:23] 2026-02-05 09:54:41,937 | INFO     | mean y: 2670090.47008547
[2026-02-05 04:55:23] 2026-02-05 09:54:41,937 | INFO     | intersect: 119567036390.99225
[2026-02-05 04:55:23] 2026-02-05 09:54:41,938 | INFO     | chi2: 0.2359702222771384
[2026-02-05 04:55:23] 2026-02-05 09:54:41,938 | INFO     | current memory leak: -67.54 B/s (using 117 data points, chi2=0.24)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,938 | INFO     | could have reported an average CPU frequency of 2599 MHz (8 samples)
[2026-02-05 04:55:23] 2026-02-05 09:54:41,938 | INFO     | ..............................
[2026-02-05 04:55:23] 2026-02-05 09:54:41,938 | INFO     | . Timing measurements:
[2026-02-05 04:55:23] 2026-02-05 09:54:41,939 | INFO     | . get job = 0 s
[2026-02-05 04:55:23] 2026-02-05 09:54:41,939 | INFO     | . initial setup = 7 s
[2026-02-05 04:55:23] 2026-02-05 09:54:41,939 | INFO     | . payload setup = 6 s
[2026-02-05 04:55:23] 2026-02-05 09:54:41,939 | INFO     | . stage-in = 0 s
[2026-02-05 04:55:23] 2026-02-05 09:54:41,939 | INFO     | . payload execution = 8711 s
[2026-02-05 04:55:23] 2026-02-05 09:54:41,939 | INFO     | . stage-out = 1 s
[2026-02-05 04:55:23] 2026-02-05 09:54:41,939 | INFO     | . log creation = 0 s
[2026-02-05 04:55:23] 2026-02-05 09:54:41,939 | INFO     | ..............................
[2026-02-05 04:55:23] 2026-02-05 09:54:42,056 | INFO     | 
[2026-02-05 04:55:23] 2026-02-05 09:54:42,056 | INFO     | job summary report
[2026-02-05 04:55:23] 2026-02-05 09:54:42,056 | INFO     | --------------------------------------------------
[2026-02-05 04:55:23] 2026-02-05 09:54:42,056 | INFO     | PanDA job id: 6990591456
[2026-02-05 04:55:23] 2026-02-05 09:54:42,056 | INFO     | task id: 48317872
[2026-02-05 04:55:23] 2026-02-05 09:54:42,056 | INFO     | errors: (none)
[2026-02-05 04:55:23] 2026-02-05 09:54:42,056 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 04:55:23] 2026-02-05 09:54:42,056 | INFO     | pilot state: finished 
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | transexitcode: 0
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | exeerrorcode: 0
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | exeerrordiag: 
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | exitcode: 0
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | exitmsg: OK
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | cpuconsumptiontime: 49158 s
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | nevents: 400
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | neventsw: 0
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | pid: 1837343
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | pgrp: 1837343
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | corecount: 8
[2026-02-05 04:55:23] 2026-02-05 09:54:42,057 | INFO     | event service: False
[2026-02-05 04:55:23] 2026-02-05 09:54:42,058 | INFO     | sizes: {0: 2278059, 1: 2278293, 11: 2278293, 8721: 2306216, 8724: 2315214, 8726: 2315270, 8728: 2315780}
[2026-02-05 04:55:23] 2026-02-05 09:54:42,058 | INFO     | --------------------------------------------------
[2026-02-05 04:55:23] 2026-02-05 09:54:42,058 | INFO     | 
[2026-02-05 04:55:23] 2026-02-05 09:54:42,058 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-05 04:55:23] 2026-02-05 09:54:42,079 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,079 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,111 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,111 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,111 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,111 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,111 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,112 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,112 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,112 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,112 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,112 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,112 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,112 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,113 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,113 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,113 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,113 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 04:55:23] 2026-02-05 09:54:42,113 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,113 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 04:55:23] 2026-02-05 09:54:42,113 | INFO     | job 6990591456 has completed (purged errors)
[2026-02-05 04:55:23] 2026-02-05 09:54:42,114 | INFO     | overall cleanup function is called
[2026-02-05 04:55:23] 2026-02-05 09:54:43,127 | INFO     | --- collectZombieJob: --- 10, [1837343]
[2026-02-05 04:55:23] 2026-02-05 09:54:43,127 | INFO     | zombie collector waiting for pid 1837343
[2026-02-05 04:55:23] 2026-02-05 09:54:43,127 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 04:55:23] 2026-02-05 09:54:43,127 | INFO     | collected zombie processes
[2026-02-05 04:55:23] 2026-02-05 09:54:43,127 | INFO     | will attempt to kill all subprocesses of pid=1837343
[2026-02-05 04:55:23] 2026-02-05 09:54:43,337 | INFO     | process IDs to be killed: [1837343] (in reverse order)
[2026-02-05 04:55:23] 2026-02-05 09:54:43,413 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 04:55:23] 2026-02-05 09:54:43,415 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 04:55:23] 2026-02-05 09:54:43,427 | INFO     | did not find any defunct processes belonging to 1837343
[2026-02-05 04:55:23] 2026-02-05 09:54:43,439 | INFO     | did not find any defunct processes belonging to 1837343
[2026-02-05 04:55:23] 2026-02-05 09:54:43,439 | INFO     | ready for new job
[2026-02-05 04:55:23] 2026-02-05 09:54:43,439 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 04:55:23] 2026-02-05 09:54:43,442 | INFO     | **************************************
[2026-02-05 04:55:23] 2026-02-05 09:54:43,443 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 04:55:23] 2026-02-05 09:54:43,443 | INFO     | **************************************
[2026-02-05 04:55:23] 2026-02-05 09:54:43,443 | INFO     | 
[2026-02-05 04:55:23] 2026-02-05 09:54:43,445 | INFO     | architecture information:
[2026-02-05 04:55:23] 2026-02-05 09:54:43,446 | INFO     | executing command: cat /etc/os-release
[2026-02-05 04:55:23] 2026-02-05 09:54:43,560 | INFO     | cat /etc/os-release:
[2026-02-05 04:55:23] NAME="CentOS Linux"
[2026-02-05 04:55:23] VERSION="7 (Core)"
[2026-02-05 04:55:23] ID="centos"
[2026-02-05 04:55:23] ID_LIKE="rhel fedora"
[2026-02-05 04:55:23] VERSION_ID="7"
[2026-02-05 04:55:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 04:55:23] ANSI_COLOR="0;31"
[2026-02-05 04:55:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 04:55:23] HOME_URL="https://www.centos.org/"
[2026-02-05 04:55:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 04:55:23] 
[2026-02-05 04:55:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 04:55:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 04:55:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 04:55:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 04:55:23] 
[2026-02-05 04:55:23] 2026-02-05 09:54:43,561 | INFO     | **************************************
[2026-02-05 04:55:23] 2026-02-05 09:54:44,063 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-05 04:55:23] 2026-02-05 09:54:44,080 | INFO     | sufficient remaining disk space (53259272192 B)
[2026-02-05 04:55:23] 2026-02-05 09:54:44,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 04:55:23] 2026-02-05 09:54:44,081 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 04:55:23] 2026-02-05 09:54:44,081 | INFO     | update_server=False
[2026-02-05 04:55:23] 2026-02-05 09:54:44,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 04:55:23] 2026-02-05 09:54:44,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 04:55:23] 2026-02-05 09:54:44,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 04:55:23] 2026-02-05 09:54:44,548 | INFO     | aborting loop
[2026-02-05 04:55:23] 2026-02-05 09:54:44,611 | INFO     | all payload control threads have been joined
[2026-02-05 04:55:23] 2026-02-05 09:54:44,843 | INFO     | all data control threads have been joined
[2026-02-05 04:55:23] 2026-02-05 09:54:45,087 | INFO     | [job] retrieve thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:45,330 | INFO     | [data] copytool_in thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:45,394 | INFO     | all job control threads have been joined
[2026-02-05 04:55:23] 2026-02-05 09:54:45,422 | INFO     | [job] validate thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:45,554 | INFO     | [job] job monitor thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:45,617 | INFO     | [payload] control thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:45,678 | INFO     | [payload] validate_post thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:45,848 | INFO     | [data] control thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:46,077 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:46,088 | INFO     | [data] copytool_out thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:46,174 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:46,227 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 04:55:23] 2026-02-05 09:54:46,229 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:46,249 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:46,386 | INFO     | [payload] failed_post thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:46,400 | INFO     | [job] control thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:47,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 04:55:23] 2026-02-05 09:54:48,075 | INFO     | [job] queue monitor thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:54:50,237 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 04:55:23] 2026-02-05 09:55:13,981 | INFO     | PID=1832570 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 04:55:23] 2026-02-05 09:55:13,981 | INFO     | .. there are 6 such processes running
[2026-02-05 04:55:23] 2026-02-05 09:55:13,982 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 04:55:23] 2026-02-05 09:55:13,982 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 04:55:23] 2026-02-05 09:55:13,982 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 04:55:23] 2026-02-05 09:55:16,758 | INFO     | [monitor] cgroup control has ended
[2026-02-05 04:55:23] 2026-02-05 09:55:17,967 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139950452467520)>', '<ExcThread(monitor, started 139950091659008)>']
[2026-02-05 04:55:23] 2026-02-05 09:55:18,005 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 04:55:23] 2026-02-05 09:55:18,005 | INFO     | [monitor] control thread has ended
[2026-02-05 04:55:23] 2026-02-05 09:55:22,993 | INFO     | all workflow threads have been joined
[2026-02-05 04:55:23] 2026-02-05 09:55:22,993 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 04:55:23] 2026-02-05 09:55:22,993 | INFO     | traces error code: 0
[2026-02-05 04:55:23] 2026-02-05 09:55:22,994 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 04:55:23] 2026-02-05 09:55:23,241 [wrapper] ==== pilot stdout END ====
[2026-02-05 04:55:23] 2026-02-05 09:55:23,245 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 04:55:23] 2026-02-05 09:55:23,256 [wrapper] pilotpid: 1832570
[2026-02-05 04:55:23] 2026-02-05 09:55:23,264 [wrapper] Pilot exit status: 0
[2026-02-05 04:55:23] 2026-02-05 09:55:23,283 [wrapper] pandaids: 6990591456
[2026-02-05 04:55:23] 2026-02-05 09:55:23,336 [wrapper] cleanup supervisor_pilot 2068689 1832571
[2026-02-05 04:55:23] 2026-02-05 09:55:23,341 [wrapper] Test setup, not cleaning
[2026-02-05 04:55:23] 2026-02-05 09:55:23,344 [wrapper] apfmon messages muted
[2026-02-05 04:55:23] 2026-02-05 09:55:23,346 [wrapper] ==== wrapper stdout END ====
[2026-02-05 04:55:23] 2026-02-05 09:55:23,349 [wrapper] ==== wrapper stderr END ====
[2026-02-05 04:55:23]  *** Error codes and diagnostics ***
[2026-02-05 04:55:23]     "exeErrorCode": 0,
[2026-02-05 04:55:23]     "exeErrorDiag": "",
[2026-02-05 04:55:23]     "pilotErrorCode": 0,
[2026-02-05 04:55:23]     "pilotErrorDiag": "",
[2026-02-05 04:55:23]  *** Listing of results directory ***
[2026-02-05 04:55:23] total 679576
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas    584422 Jan 28 22:11 pilot3.tar.gz
[2026-02-05 04:55:23] -rwx------. 1 boincer umatlas     36322 Jan 28 22:12 runpilot2-wrapper.sh
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas      5111 Jan 28 22:14 queuedata.json
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas       100 Feb  5 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 04:55:23] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  5 02:28 run_atlas
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas       105 Feb  5 02:28 job.xml
[2026-02-05 04:55:23] -rw-r--r--. 2 boincer umatlas 503685235 Feb  5 02:28 EVNT.48317869._000176.pool.root.1
[2026-02-05 04:55:23] drwxrwx--x. 2 boincer umatlas      4096 Feb  5 02:28 shared
[2026-02-05 04:55:23] -rw-r--r--. 2 boincer umatlas    597764 Feb  5 02:28 input.tar.gz
[2026-02-05 04:55:23] -rw-r--r--. 2 boincer umatlas     15845 Feb  5 02:28 start_atlas.sh
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas         0 Feb  5 02:28 boinc_lockfile
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas      2516 Feb  5 02:28 pandaJob.out
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas        57 Feb  5 02:28 setup.sh.local
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas   1009544 Feb  5 02:28 agis_schedconf.cvmfs.json
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas   1511668 Feb  5 02:28 agis_ddmendpoints.agis.ALL.json
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas       434 Feb  5 02:29 workernode_map.json
[2026-02-05 04:55:23] drwx------. 5 boincer umatlas      4096 Feb  5 02:29 pilot3
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas      6658 Feb  5 04:46 init_data.xml
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas 185032094 Feb  5 04:53 HITS.48317872._009641.pool.root.1
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas       530 Feb  5 04:54 boinc_task_state.xml
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas        95 Feb  5 04:54 pilot_heartbeat.json
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas      1045 Feb  5 04:54 memory_monitor_summary.json
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas    387944 Feb  5 04:54 log.48317872._009641.job.log.tgz.1
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas      6376 Feb  5 04:54 heartbeat.json
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas      8192 Feb  5 04:55 boinc_mmap_file
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas      4819 Feb  5 04:55 pilotlog.txt
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas   1221246 Feb  5 04:55 log.48317872._009641.job.log.1
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas       357 Feb  5 04:55 output.list
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas       620 Feb  5 04:55 runtime_log
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas   1628160 Feb  5 04:55 result.tar.gz
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas       652 Feb  5 04:55 yd6NDmfdX58n9Rq4apOajLDm4fhM0noT9bVooX4SDmmfHKDm9W9ycm.diag
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas      9336 Feb  5 04:55 runtime_log.err
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas        27 Feb  5 04:55 wrapper_checkpoint.txt
[2026-02-05 04:55:23] -rw-r--r--. 1 boincer umatlas     21400 Feb  5 04:55 stderr.txt
[2026-02-05 04:55:23] HITS file was successfully produced:
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas 185032094 Feb  5 04:53 shared/HITS.pool.root.1
[2026-02-05 04:55:23]  *** Contents of shared directory: ***
[2026-02-05 04:55:23] total 674780
[2026-02-05 04:55:23] -rw-r--r--. 2 boincer umatlas 503685235 Feb  5 02:28 ATLAS.root_0
[2026-02-05 04:55:23] -rw-r--r--. 2 boincer umatlas    597764 Feb  5 02:28 input.tar.gz
[2026-02-05 04:55:23] -rw-r--r--. 2 boincer umatlas     15845 Feb  5 02:28 start_atlas.sh
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas 185032094 Feb  5 04:53 HITS.pool.root.1
[2026-02-05 04:55:23] -rw-------. 1 boincer umatlas   1628160 Feb  5 04:55 result.tar.gz
04:55:25 (1828845): run_atlas exited; CPU time 49284.240708
04:55:25 (1828845): called boinc_finish(0)

</stderr_txt>
]]>

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