Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:20:29 (2427864): wrapper (7.7.26015): starting
06:20:29 (2427864): wrapper: running run_atlas (--nthreads 3)
[2026-02-05 06:20:29] Arguments: --nthreads 3
[2026-02-05 06:20:29] Threads: 3
[2026-02-05 06:20:29] Checking for CVMFS
[2026-02-05 06:20:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 06:20:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 06:20:30] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 06:20:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 06:20:30] 2.9.2.0 730779 10933 84544 155890 2 49 18857227 36864001 0 130560 0 4807110 99.985 370726 8218 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-05 06:20:30] CVMFS is ok
[2026-02-05 06:20:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 06:20:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 06:20:30] Further information can be found at the LHC@home message board.
[2026-02-05 06:20:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 06:20:30] Checking for apptainer binary...
[2026-02-05 06:20:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 06:20:30] Running /usr/bin/apptainer --version
[2026-02-05 06:20:30] apptainer version 1.4.1-1.1
[2026-02-05 06:20:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 06:20:30] cosA127
[2026-02-05 06:20:30] apptainer works
[2026-02-05 06:20:30] Set ATHENA_PROC_NUMBER=3
[2026-02-05 06:20:30] Set ATHENA_CORE_NUMBER=3
[2026-02-05 06:20:30] Starting ATLAS job with PandaID=6990487579
[2026-02-05 06:20:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 07:53:11]  *** The last 200 lines of the pilot log: ***
[2026-02-05 07:53:11]  workdir=None
[2026-02-05 07:53:11] ]
[2026-02-05 07:53:11] 2026-02-05 06:52:35,598 | INFO     | transferring file log.48317971._003471.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6990487579/log.48317971._003471.job.log.tgz.1 to /local/data/boinc/
[2026-02-05 07:53:11] 2026-02-05 06:52:35,598 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6990487579/log.48317971._003471.job.log.tgz.1 /local/data/boinc/slots/0/log.48317971._0034
[2026-02-05 07:53:11] 2026-02-05 06:52:35,610 | INFO     | adding to output.list: log.48317971._003471.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/cf/f3/log.48317971._003471.job.log.tg
[2026-02-05 07:53:11] 2026-02-05 06:52:35,611 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-05 07:53:11] 2026-02-05 06:52:35,611 | INFO     | summary of transferred files:
[2026-02-05 07:53:11] 2026-02-05 06:52:35,611 | INFO     |  -- lfn=log.48317971._003471.job.log.tgz.1, status_code=0, status=transferred
[2026-02-05 07:53:11] 2026-02-05 06:52:35,611 | INFO     | stage-out finished correctly
[2026-02-05 07:53:11] 2026-02-05 06:52:36,336 | INFO     | time since job start (5516s) is within the limit (349056.0s)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,344 | WARNING  | process 2436329 can no longer be monitored (due to stat problems) - aborting
[2026-02-05 07:53:11] 2026-02-05 06:52:37,344 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6990487579/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,345 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6990487579/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,345 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-05 07:53:11] 2026-02-05 06:52:37,345 | WARNING  | maxPSS not found in memory monitor output
[2026-02-05 07:53:11] 2026-02-05 06:52:37,345 | INFO     | reaping zombies for max 20 seconds
[2026-02-05 07:53:11] 2026-02-05 06:52:37,351 | INFO     | checking for looping job (in state=finished)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,351 | INFO     | using looping job limit: 7200 s
[2026-02-05 07:53:11] 2026-02-05 06:52:37,352 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 2132649 B
[2026-02-05 07:53:11] 2026-02-05 06:52:37,352 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16082 B
[2026-02-05 07:53:11] 2026-02-05 06:52:37,352 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-05 07:53:11] 2026-02-05 06:52:37,360 | INFO     | sufficient remaining disk space (341806415872 B)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,361 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,361 | INFO     | size of work directory /local/data/boinc/slots/0/PanDA_Pilot-6990487579: 2434745 B (within 5033164800 B limit)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,361 | INFO     | pfn file=/local/data/boinc/slots/0/PanDA_Pilot-6990487579/HITS.48317971._003471.pool.root.1 does not exist (skip from workdir size calculation)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,361 | INFO     | total size of present files: 0 B (workdir size: 2434745 B)
[2026-02-05 07:53:11] 2026-02-05 06:52:37,361 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6990487579/HITS.48317971._003471.pool.root.1 since it does not exist
[2026-02-05 07:53:11] 2026-02-05 06:52:37,405 | INFO     | number of running child processes to parent process 2436329: 1
[2026-02-05 07:53:11] 2026-02-05 06:52:37,405 | INFO     | maximum number of monitored processes: 6
[2026-02-05 07:53:11] 2026-02-05 06:52:38,342 | INFO     | time since job start (5518s) is within the limit (349056.0s)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,788 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-05 07:53:11] 2026-02-05 06:52:38,820 | INFO     | job 6990487579 has state=finished
[2026-02-05 07:53:11] 2026-02-05 06:52:38,820 | INFO     | preparing for final server update for job 6990487579 in state='finished'
[2026-02-05 07:53:11] 2026-02-05 06:52:38,821 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6990487579/jobReport.json
[2026-02-05 07:53:11] 2026-02-05 06:52:38,822 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-05 07:53:11] 2026-02-05 06:52:38,822 | INFO     | this job has now completed (state=finished)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,822 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,822 | INFO     | log transfer has been attempted: DONE
[2026-02-05 07:53:11] 2026-02-05 06:52:38,822 | INFO     | job 6990487579 has finished - writing final server update
[2026-02-05 07:53:11] 2026-02-05 06:52:38,822 | INFO     | total number of processed events: 400 (read)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,823 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6990487579/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,823 | INFO     | extracted standard info from prmon json
[2026-02-05 07:53:11] 2026-02-05 06:52:38,823 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 07:53:11] 2026-02-05 06:52:38,823 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 07:53:11] 2026-02-05 06:52:38,823 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 07:53:11] 2026-02-05 06:52:38,823 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | fitting pss+swap vs Time
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | sum of square deviations: 183761585.0
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | sum of deviations: -18270989772.499996
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | mean x: 1770271693.5
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | mean y: 2530934.011904762
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | intersect: 176016554792.61514
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | chi2: 0.04831021672748343
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | current memory leak: -99.43 B/s (using 84 data points, chi2=0.05)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | could have reported an average CPU frequency of 3751 MHz (7 samples)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | ..............................
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | . Timing measurements:
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | . get job = 0 s
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | . initial setup = 3 s
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | . payload setup = 2 s
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | . stage-in = 0 s
[2026-02-05 07:53:11] 2026-02-05 06:52:38,824 | INFO     | . payload execution = 5497 s
[2026-02-05 07:53:11] 2026-02-05 06:52:38,825 | INFO     | . stage-out = 0 s
[2026-02-05 07:53:11] 2026-02-05 06:52:38,825 | INFO     | . log creation = 0 s
[2026-02-05 07:53:11] 2026-02-05 06:52:38,825 | INFO     | ..............................
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | 
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | job summary report
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | --------------------------------------------------
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | PanDA job id: 6990487579
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | task id: 48317971
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | errors: (none)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | pilot state: finished 
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | transexitcode: 0
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | exeerrorcode: 0
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | exeerrordiag: 
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | exitcode: 0
[2026-02-05 07:53:11] 2026-02-05 06:52:38,850 | INFO     | exitmsg: OK
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | cpuconsumptiontime: 15840 s
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | nevents: 400
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | neventsw: 0
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | pid: 2436329
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | pgrp: 2436329
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | corecount: 3
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | event service: False
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | sizes: {0: 2278203, 11: 2278203, 5504: 2313921, 5507: 2314143}
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | --------------------------------------------------
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | 
[2026-02-05 07:53:11] 2026-02-05 06:52:38,851 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-05 07:53:11] 2026-02-05 06:52:38,862 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,862 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | job 6990487579 has completed (purged errors)
[2026-02-05 07:53:11] 2026-02-05 06:52:38,863 | INFO     | overall cleanup function is called
[2026-02-05 07:53:11] 2026-02-05 06:52:39,870 | INFO     | --- collectZombieJob: --- 10, [2436329]
[2026-02-05 07:53:11] 2026-02-05 06:52:39,870 | INFO     | zombie collector waiting for pid 2436329
[2026-02-05 07:53:11] 2026-02-05 06:52:39,870 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 07:53:11] 2026-02-05 06:52:39,870 | INFO     | collected zombie processes
[2026-02-05 07:53:11] 2026-02-05 06:52:39,870 | INFO     | will attempt to kill all subprocesses of pid=2436329
[2026-02-05 07:53:11] 2026-02-05 06:52:39,918 | INFO     | process IDs to be killed: [2436329] (in reverse order)
[2026-02-05 07:53:11] 2026-02-05 06:52:39,944 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 07:53:11] 2026-02-05 06:52:39,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 07:53:11] 2026-02-05 06:52:39,945 | INFO     | did not find any defunct processes belonging to 2436329
[2026-02-05 07:53:11] 2026-02-05 06:52:39,946 | INFO     | did not find any defunct processes belonging to 2436329
[2026-02-05 07:53:11] 2026-02-05 06:52:39,947 | INFO     | ready for new job
[2026-02-05 07:53:11] 2026-02-05 06:52:39,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 07:53:11] 2026-02-05 06:52:39,947 | INFO     | **************************************
[2026-02-05 07:53:11] 2026-02-05 06:52:39,947 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 07:53:11] 2026-02-05 06:52:39,947 | INFO     | **************************************
[2026-02-05 07:53:11] 2026-02-05 06:52:39,947 | INFO     | 
[2026-02-05 07:53:11] 2026-02-05 06:52:39,948 | INFO     | architecture information:
[2026-02-05 07:53:11] 2026-02-05 06:52:39,948 | INFO     | executing command: cat /etc/os-release
[2026-02-05 07:53:11] 2026-02-05 06:52:39,956 | INFO     | cat /etc/os-release:
[2026-02-05 07:53:11] NAME="CentOS Linux"
[2026-02-05 07:53:11] VERSION="7 (Core)"
[2026-02-05 07:53:11] ID="centos"
[2026-02-05 07:53:11] ID_LIKE="rhel fedora"
[2026-02-05 07:53:11] VERSION_ID="7"
[2026-02-05 07:53:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 07:53:11] ANSI_COLOR="0;31"
[2026-02-05 07:53:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 07:53:11] HOME_URL="https://www.centos.org/"
[2026-02-05 07:53:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 07:53:11] 
[2026-02-05 07:53:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 07:53:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 07:53:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 07:53:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 07:53:11] 
[2026-02-05 07:53:11] 2026-02-05 06:52:39,957 | INFO     | **************************************
[2026-02-05 07:53:11] 2026-02-05 06:52:40,460 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-05 07:53:11] 2026-02-05 06:52:40,473 | INFO     | sufficient remaining disk space (341809561600 B)
[2026-02-05 07:53:11] 2026-02-05 06:52:40,474 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 07:53:11] 2026-02-05 06:52:40,474 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 07:53:11] 2026-02-05 06:52:40,474 | INFO     | update_server=False
[2026-02-05 07:53:11] 2026-02-05 06:52:40,474 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 07:53:11] 2026-02-05 06:52:40,474 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 07:53:11] 2026-02-05 06:52:40,474 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 07:53:11] 2026-02-05 06:52:40,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 07:53:11] 2026-02-05 06:52:40,914 | INFO     | aborting loop
[2026-02-05 07:53:11] 2026-02-05 06:52:40,927 | INFO     | all data control threads have been joined
[2026-02-05 07:53:11] 2026-02-05 06:52:41,150 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 07:53:11] 2026-02-05 06:52:41,479 | INFO     | [job] retrieve thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:41,480 | INFO     | [job] queue monitor thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:41,566 | INFO     | all payload control threads have been joined
[2026-02-05 07:53:11] 2026-02-05 06:52:41,634 | INFO     | all job control threads have been joined
[2026-02-05 07:53:11] 2026-02-05 06:52:41,919 | INFO     | [job] job monitor thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:41,932 | INFO     | [data] control thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,079 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,224 | INFO     | [payload] failed_post thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,314 | INFO     | [job] validate thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,383 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,483 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,532 | INFO     | [data] copytool_in thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,572 | INFO     | [payload] control thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,640 | INFO     | [job] control thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:42,761 | INFO     | [payload] validate_post thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:43,156 | INFO     | [data] copytool_out thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:44,481 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:46,098 | INFO     | [monitor] cgroup control has ended
[2026-02-05 07:53:11] 2026-02-05 06:52:51,497 | INFO     | job.realtimelogging is not enabled
[2026-02-05 07:53:11] 2026-02-05 06:52:52,503 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 07:53:11] 2026-02-05 06:52:52,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738451740480)>', '<ExcThread(monitor, started 139737826322176)>']
[2026-02-05 07:53:11] 2026-02-05 06:52:57,675 | INFO     | all workflow threads have been joined
[2026-02-05 07:53:11] 2026-02-05 06:52:57,676 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 07:53:11] 2026-02-05 06:52:57,676 | INFO     | traces error code: 0
[2026-02-05 07:53:11] 2026-02-05 06:52:57,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 07:53:11] 2026-02-05 06:53:11,463 | INFO     | PID=2431899 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 07:53:11] 2026-02-05 06:53:11,464 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 07:53:11] 2026-02-05 06:53:11,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 07:53:11] 2026-02-05 06:53:11,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 07:53:11] 2026-02-05 06:53:11,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 07:53:11] 2026-02-05 06:53:11,464 | INFO     | [monitor] control thread has ended
[2026-02-05 07:53:11] 2026-02-05 06:53:11,510 [wrapper] ==== pilot stdout END ====
[2026-02-05 07:53:11] 2026-02-05 06:53:11,513 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 07:53:11] 2026-02-05 06:53:11,515 [wrapper] pilotpid: 2431899
[2026-02-05 07:53:11] 2026-02-05 06:53:11,517 [wrapper] Pilot exit status: 0
[2026-02-05 07:53:11] 2026-02-05 06:53:11,524 [wrapper] pandaids: 6990487579
[2026-02-05 07:53:11] 2026-02-05 06:53:11,541 [wrapper] cleanup supervisor_pilot 2441641 2431900
[2026-02-05 07:53:11] 2026-02-05 06:53:11,544 [wrapper] Test setup, not cleaning
[2026-02-05 07:53:11] 2026-02-05 06:53:11,546 [wrapper] apfmon messages muted
[2026-02-05 07:53:11] 2026-02-05 06:53:11,548 [wrapper] ==== wrapper stdout END ====
[2026-02-05 07:53:11] 2026-02-05 06:53:11,551 [wrapper] ==== wrapper stderr END ====
[2026-02-05 07:53:11]  *** Error codes and diagnostics ***
[2026-02-05 07:53:11]     "exeErrorCode": 0,
[2026-02-05 07:53:11]     "exeErrorDiag": "",
[2026-02-05 07:53:11]     "pilotErrorCode": 0,
[2026-02-05 07:53:11]     "pilotErrorDiag": "",
[2026-02-05 07:53:11]  *** Listing of results directory ***
[2026-02-05 07:53:11] total 722728
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc    584422 Jan 29 02:04 pilot3.tar.gz
[2026-02-05 07:53:11] -rwx------ 1 boinc boinc     36322 Jan 29 02:06 runpilot2-wrapper.sh
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc      5111 Jan 29 02:09 queuedata.json
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc       100 Feb  5 06:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 07:53:11] -rwxr-xr-x 1 boinc boinc      7986 Feb  5 06:20 run_atlas
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc       105 Feb  5 06:20 job.xml
[2026-02-05 07:53:11] -rw-r--r-- 2 boinc boinc 532737692 Feb  5 06:20 EVNT.48317969._000015.pool.root.1
[2026-02-05 07:53:11] -rw-r--r-- 2 boinc boinc    597765 Feb  5 06:20 input.tar.gz
[2026-02-05 07:53:11] -rw-r--r-- 2 boinc boinc     15845 Feb  5 06:20 start_atlas.sh
[2026-02-05 07:53:11] drwxrwx--x 2 boinc boinc      4096 Feb  5 06:20 shared
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc         0 Feb  5 06:20 boinc_setup_complete
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc      6440 Feb  5 06:20 init_data.xml
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc         0 Feb  5 06:20 boinc_lockfile
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc      2512 Feb  5 06:20 pandaJob.out
[2026-02-05 07:53:11] -rw------- 1 boinc boinc   1009552 Feb  5 06:20 agis_schedconf.cvmfs.json
[2026-02-05 07:53:11] -rw------- 1 boinc boinc   1511668 Feb  5 06:20 agis_ddmendpoints.agis.ALL.json
[2026-02-05 07:53:11] -rw------- 1 boinc boinc       427 Feb  5 06:20 workernode_map.json
[2026-02-05 07:53:11] drwx------ 5 boinc boinc      4096 Feb  5 06:20 pilot3
[2026-02-05 07:53:11] -rw------- 1 boinc boinc 201266010 Feb  5 07:52 HITS.48317971._003471.pool.root.1
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc       530 Feb  5 07:52 boinc_task_state.xml
[2026-02-05 07:53:11] -rw------- 1 boinc boinc      1016 Feb  5 07:52 memory_monitor_summary.json
[2026-02-05 07:53:11] -rw------- 1 boinc boinc    260777 Feb  5 07:52 log.48317971._003471.job.log.tgz.1
[2026-02-05 07:53:11] -rw------- 1 boinc boinc      6308 Feb  5 07:52 heartbeat.json
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc      8192 Feb  5 07:53 boinc_mmap_file
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc        27 Feb  5 07:53 wrapper_checkpoint.txt
[2026-02-05 07:53:11] -rw------- 1 boinc boinc       747 Feb  5 07:53 pilotlog.txt
[2026-02-05 07:53:11] -rw------- 1 boinc boinc        95 Feb  5 07:53 pilot_heartbeat.json
[2026-02-05 07:53:11] -rw------- 1 boinc boinc    805092 Feb  5 07:53 log.48317971._003471.job.log.1
[2026-02-05 07:53:11] -rw------- 1 boinc boinc       357 Feb  5 07:53 output.list
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc       620 Feb  5 07:53 runtime_log
[2026-02-05 07:53:11] -rw------- 1 boinc boinc   1085440 Feb  5 07:53 result.tar.gz
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc      8901 Feb  5 07:53 runtime_log.err
[2026-02-05 07:53:11] -rw------- 1 boinc boinc       658 Feb  5 07:53 eNwNDmkfV58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmBcHKDmAIkZxm.diag
[2026-02-05 07:53:11] -rw-r--r-- 1 boinc boinc     22485 Feb  5 07:53 stderr.txt
[2026-02-05 07:53:11] HITS file was successfully produced:
[2026-02-05 07:53:11] -rw------- 1 boinc boinc 201266010 Feb  5 07:52 shared/HITS.pool.root.1
[2026-02-05 07:53:11]  *** Contents of shared directory: ***
[2026-02-05 07:53:11] total 718472
[2026-02-05 07:53:11] -rw-r--r-- 2 boinc boinc 532737692 Feb  5 06:20 ATLAS.root_0
[2026-02-05 07:53:11] -rw-r--r-- 2 boinc boinc    597765 Feb  5 06:20 input.tar.gz
[2026-02-05 07:53:11] -rw-r--r-- 2 boinc boinc     15845 Feb  5 06:20 start_atlas.sh
[2026-02-05 07:53:11] -rw------- 1 boinc boinc 201266010 Feb  5 07:52 HITS.pool.root.1
[2026-02-05 07:53:11] -rw------- 1 boinc boinc   1085440 Feb  5 07:53 result.tar.gz
07:53:12 (2427864): run_atlas exited; CPU time 15869.340418
07:53:12 (2427864): called boinc_finish(0)

</stderr_txt>
]]>

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