Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
21:46:52 (21870): wrapper (7.7.26015): starting
21:46:52 (21870): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 21:46:52] Arguments: --nthreads 8
[2026-02-04 21:46:52] Threads: 8
[2026-02-04 21:46:52] Checking for CVMFS
[2026-02-04 21:46:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 21:46:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 21:46:52] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 21:46:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 21:46:52] 2.11.2.0 2847 174958 95012 155885 0 1 19653378 20275201 1 130560 0 48735543 99.819 13334962 26972 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-04 21:46:52] CVMFS is ok
[2026-02-04 21:46:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 21:46:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 21:46:53] Further information can be found at the LHC@home message board.
[2026-02-04 21:46:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 21:46:53] Checking for apptainer binary...
[2026-02-04 21:46:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 21:46:53] Running /usr/bin/apptainer --version
[2026-02-04 21:46:53] apptainer version 1.3.2-1.el7
[2026-02-04 21:46:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 21:46:54] c-204-19.aglt2.org
[2026-02-04 21:46:54] apptainer works
[2026-02-04 21:46:54] Set ATHENA_PROC_NUMBER=8
[2026-02-04 21:46:54] Set ATHENA_CORE_NUMBER=8
[2026-02-04 21:46:54] Starting ATLAS job with PandaID=6999847303
[2026-02-04 21:46:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:10:35 (30470): wrapper (7.7.26015): starting
23:10:35 (30470): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 23:10:35] Arguments: --nthreads 8
[2026-02-04 23:10:35] Threads: 8
[2026-02-04 23:10:35] This job has been restarted, cleaning up previous attempt
[2026-02-04 23:10:35] Checking for CVMFS
[2026-02-04 23:10:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 23:10:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 23:10:36] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 23:10:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 23:10:36] 2.11.2.0 2847 175041 94696 155887 0 32 19785148 20275201 1 130560 0 48786885 99.819 13339185 26973 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-04 23:10:36] CVMFS is ok
[2026-02-04 23:10:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 23:10:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 23:10:36] Further information can be found at the LHC@home message board.
[2026-02-04 23:10:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 23:10:36] Checking for apptainer binary...
[2026-02-04 23:10:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 23:10:36] Running /usr/bin/apptainer --version
[2026-02-04 23:10:36] apptainer version 1.3.2-1.el7
[2026-02-04 23:10:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 23:10:38] c-204-19.aglt2.org
[2026-02-04 23:10:38] apptainer works
[2026-02-04 23:10:38] Set ATHENA_PROC_NUMBER=8
[2026-02-04 23:10:38] Set ATHENA_CORE_NUMBER=8
[2026-02-04 23:10:38] Starting ATLAS job with PandaID=6999847303
[2026-02-04 23:10:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 01:29:13]  *** The last 200 lines of the pilot log: ***
[2026-02-05 01:29:13] 2026-02-05 06:28:33,174 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,174 | INFO     | log transfer has been attempted: DONE
[2026-02-05 01:29:13] 2026-02-05 06:28:33,174 | INFO     | job 6999847303 has finished - writing final server update
[2026-02-05 01:29:13] 2026-02-05 06:28:33,175 | INFO     | total number of processed events: 400 (read)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,177 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6999847303/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,178 | INFO     | extracted standard info from prmon json
[2026-02-05 01:29:13] 2026-02-05 06:28:33,178 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 01:29:13] 2026-02-05 06:28:33,178 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 01:29:13] 2026-02-05 06:28:33,178 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 01:29:13] 2026-02-05 06:28:33,178 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 01:29:13] 2026-02-05 06:28:33,181 | INFO     | fitting pss+swap vs Time
[2026-02-05 01:29:13] 2026-02-05 06:28:33,182 | INFO     | sum of square deviations: 762879420.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,183 | INFO     | sum of deviations: 24519563171.999996
[2026-02-05 01:29:13] 2026-02-05 06:28:33,183 | INFO     | mean x: 1770268768.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,183 | INFO     | mean y: 2495839.4
[2026-02-05 01:29:13] 2026-02-05 06:28:33,183 | INFO     | intersect: -56895377861.78675
[2026-02-05 01:29:13] 2026-02-05 06:28:33,184 | INFO     | chi2: 1.897473357501146
[2026-02-05 01:29:13] 2026-02-05 06:28:33,184 | INFO     | sum of square deviations: 681212772.5
[2026-02-05 01:29:13] 2026-02-05 06:28:33,185 | INFO     | sum of deviations: 23895396745.499992
[2026-02-05 01:29:13] 2026-02-05 06:28:33,185 | INFO     | mean x: 1770268615.5
[2026-02-05 01:29:13] 2026-02-05 06:28:33,185 | INFO     | mean y: 2494673.4384615384
[2026-02-05 01:29:13] 2026-02-05 06:28:33,185 | INFO     | intersect: -62094507351.69528
[2026-02-05 01:29:13] 2026-02-05 06:28:33,185 | INFO     | chi2: 1.898179637715816
[2026-02-05 01:29:13] 2026-02-05 06:28:33,186 | INFO     | current chi2=1.898179637715816 (change=-0.03722214132166443 %)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,186 | INFO     | right removable region: 129
[2026-02-05 01:29:13] 2026-02-05 06:28:33,186 | INFO     | sum of square deviations: 681212772.5
[2026-02-05 01:29:13] 2026-02-05 06:28:33,186 | INFO     | sum of deviations: -2018316149.9999995
[2026-02-05 01:29:13] 2026-02-05 06:28:33,187 | INFO     | mean x: 1770268920.5
[2026-02-05 01:29:13] 2026-02-05 06:28:33,187 | INFO     | mean y: 2544883.3538461537
[2026-02-05 01:29:13] 2026-02-05 06:28:33,187 | INFO     | intersect: 5247546880.271359
[2026-02-05 01:29:13] 2026-02-05 06:28:33,187 | INFO     | chi2: 0.08263474431149755
[2026-02-05 01:29:13] 2026-02-05 06:28:33,187 | INFO     | current chi2=0.08263474431149755 (change=95.64501161585096 %)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,188 | INFO     | sum of square deviations: 605592750.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,188 | INFO     | sum of deviations: -6684174308.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,188 | INFO     | mean x: 1770269073.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,188 | INFO     | mean y: 2554185.6
[2026-02-05 01:29:13] 2026-02-05 06:28:33,189 | INFO     | intersect: 19541736343.89627
[2026-02-05 01:29:13] 2026-02-05 06:28:33,189 | INFO     | chi2: 0.01274830690705251
[2026-02-05 01:29:13] 2026-02-05 06:28:33,189 | INFO     | current chi2=0.01274830690705251 (change=84.57270363299381 %)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,189 | INFO     | sum of square deviations: 535786790.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,190 | INFO     | sum of deviations: -6896548858.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,190 | INFO     | mean x: 1770269225.5
[2026-02-05 01:29:13] 2026-02-05 06:28:33,190 | INFO     | mean y: 2554636.9
[2026-02-05 01:29:13] 2026-02-05 06:28:33,190 | INFO     | intersect: 22789133987.754417
[2026-02-05 01:29:13] 2026-02-05 06:28:33,190 | INFO     | chi2: 0.010252840963158724
[2026-02-05 01:29:13] 2026-02-05 06:28:33,190 | INFO     | current chi2=0.010252840963158724 (change=19.57488129277203 %)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,191 | INFO     | left removable region: 30
[2026-02-05 01:29:13] 2026-02-05 06:28:33,191 | INFO     | sum of square deviations: 300842850.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,191 | INFO     | sum of deviations: -5206651828.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,191 | INFO     | mean x: 1770269500.0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,192 | INFO     | mean y: 2552925.0505050505
[2026-02-05 01:29:13] 2026-02-05 06:28:33,192 | INFO     | intersect: 30640398990.62144
[2026-02-05 01:29:13] 2026-02-05 06:28:33,192 | INFO     | chi2: 0.0076821069770252335
[2026-02-05 01:29:13] 2026-02-05 06:28:33,192 | INFO     | current memory leak: -17.31 B/s (using 99 data points, chi2=0.01)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,192 | INFO     | could have reported an average CPU frequency of 1679 MHz (8 samples)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,193 | INFO     | ..............................
[2026-02-05 01:29:13] 2026-02-05 06:28:33,193 | INFO     | . Timing measurements:
[2026-02-05 01:29:13] 2026-02-05 06:28:33,193 | INFO     | . get job = 0 s
[2026-02-05 01:29:13] 2026-02-05 06:28:33,193 | INFO     | . initial setup = 1 s
[2026-02-05 01:29:13] 2026-02-05 06:28:33,193 | INFO     | . payload setup = 8 s
[2026-02-05 01:29:13] 2026-02-05 06:28:33,193 | INFO     | . stage-in = 0 s
[2026-02-05 01:29:13] 2026-02-05 06:28:33,193 | INFO     | . payload execution = 8231 s
[2026-02-05 01:29:13] 2026-02-05 06:28:33,193 | INFO     | . stage-out = 2 s
[2026-02-05 01:29:13] 2026-02-05 06:28:33,194 | INFO     | . log creation = 0 s
[2026-02-05 01:29:13] 2026-02-05 06:28:33,194 | INFO     | ..............................
[2026-02-05 01:29:13] 2026-02-05 06:28:33,300 | INFO     | 
[2026-02-05 01:29:13] 2026-02-05 06:28:33,300 | INFO     | job summary report
[2026-02-05 01:29:13] 2026-02-05 06:28:33,300 | INFO     | --------------------------------------------------
[2026-02-05 01:29:13] 2026-02-05 06:28:33,301 | INFO     | PanDA job id: 6999847303
[2026-02-05 01:29:13] 2026-02-05 06:28:33,301 | INFO     | task id: 48317892
[2026-02-05 01:29:13] 2026-02-05 06:28:33,301 | INFO     | errors: (none)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,301 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 01:29:13] 2026-02-05 06:28:33,301 | INFO     | pilot state: finished 
[2026-02-05 01:29:13] 2026-02-05 06:28:33,301 | INFO     | transexitcode: 0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,302 | INFO     | exeerrorcode: 0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,302 | INFO     | exeerrordiag: 
[2026-02-05 01:29:13] 2026-02-05 06:28:33,302 | INFO     | exitcode: 0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,302 | INFO     | exitmsg: OK
[2026-02-05 01:29:13] 2026-02-05 06:28:33,302 | INFO     | cpuconsumptiontime: 60620 s
[2026-02-05 01:29:13] 2026-02-05 06:28:33,303 | INFO     | nevents: 400
[2026-02-05 01:29:13] 2026-02-05 06:28:33,303 | INFO     | neventsw: 0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,303 | INFO     | pid: 4309
[2026-02-05 01:29:13] 2026-02-05 06:28:33,303 | INFO     | pgrp: 4309
[2026-02-05 01:29:13] 2026-02-05 06:28:33,303 | INFO     | corecount: 8
[2026-02-05 01:29:13] 2026-02-05 06:28:33,303 | INFO     | event service: False
[2026-02-05 01:29:13] 2026-02-05 06:28:33,304 | INFO     | sizes: {0: 2277734, 1: 2278251, 12: 2278251, 8243: 2306046, 8245: 2315100, 8246: 2315238}
[2026-02-05 01:29:13] 2026-02-05 06:28:33,304 | INFO     | --------------------------------------------------
[2026-02-05 01:29:13] 2026-02-05 06:28:33,304 | INFO     | 
[2026-02-05 01:29:13] 2026-02-05 06:28:33,304 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-05 01:29:13] 2026-02-05 06:28:33,331 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,332 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,332 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,332 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,333 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,333 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,333 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,334 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,335 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,335 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 01:29:13] 2026-02-05 06:28:33,336 | INFO     | job 6999847303 has completed (purged errors)
[2026-02-05 01:29:13] 2026-02-05 06:28:33,336 | INFO     | overall cleanup function is called
[2026-02-05 01:29:13] 2026-02-05 06:28:34,344 | INFO     | --- collectZombieJob: --- 10, [4309]
[2026-02-05 01:29:13] 2026-02-05 06:28:34,344 | INFO     | zombie collector waiting for pid 4309
[2026-02-05 01:29:13] 2026-02-05 06:28:34,344 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 01:29:13] 2026-02-05 06:28:34,345 | INFO     | collected zombie processes
[2026-02-05 01:29:13] 2026-02-05 06:28:34,345 | INFO     | will attempt to kill all subprocesses of pid=4309
[2026-02-05 01:29:13] 2026-02-05 06:28:34,433 | INFO     | process IDs to be killed: [4309] (in reverse order)
[2026-02-05 01:29:13] 2026-02-05 06:28:34,495 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 01:29:13] 2026-02-05 06:28:34,495 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 01:29:13] 2026-02-05 06:28:34,500 | INFO     | did not find any defunct processes belonging to 4309
[2026-02-05 01:29:13] 2026-02-05 06:28:34,504 | INFO     | did not find any defunct processes belonging to 4309
[2026-02-05 01:29:13] 2026-02-05 06:28:34,504 | INFO     | ready for new job
[2026-02-05 01:29:13] 2026-02-05 06:28:34,504 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 01:29:13] 2026-02-05 06:28:34,506 | INFO     | **************************************
[2026-02-05 01:29:13] 2026-02-05 06:28:34,506 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 01:29:13] 2026-02-05 06:28:34,506 | INFO     | **************************************
[2026-02-05 01:29:13] 2026-02-05 06:28:34,506 | INFO     | 
[2026-02-05 01:29:13] 2026-02-05 06:28:34,506 | INFO     | architecture information:
[2026-02-05 01:29:13] 2026-02-05 06:28:34,507 | INFO     | executing command: cat /etc/os-release
[2026-02-05 01:29:13] 2026-02-05 06:28:34,525 | INFO     | cat /etc/os-release:
[2026-02-05 01:29:13] NAME="CentOS Linux"
[2026-02-05 01:29:13] VERSION="7 (Core)"
[2026-02-05 01:29:13] ID="centos"
[2026-02-05 01:29:13] ID_LIKE="rhel fedora"
[2026-02-05 01:29:13] VERSION_ID="7"
[2026-02-05 01:29:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 01:29:13] ANSI_COLOR="0;31"
[2026-02-05 01:29:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 01:29:13] HOME_URL="https://www.centos.org/"
[2026-02-05 01:29:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 01:29:13] 
[2026-02-05 01:29:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 01:29:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 01:29:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 01:29:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 01:29:13] 
[2026-02-05 01:29:13] 2026-02-05 06:28:34,525 | INFO     | **************************************
[2026-02-05 01:29:13] 2026-02-05 06:28:35,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-05 01:29:13] 2026-02-05 06:28:35,055 | INFO     | sufficient remaining disk space (17985175552 B)
[2026-02-05 01:29:13] 2026-02-05 06:28:35,056 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 01:29:13] 2026-02-05 06:28:35,056 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 01:29:13] 2026-02-05 06:28:35,056 | INFO     | update_server=False
[2026-02-05 01:29:13] 2026-02-05 06:28:35,057 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 01:29:13] 2026-02-05 06:28:35,057 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 01:29:13] 2026-02-05 06:28:35,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 01:29:13] 2026-02-05 06:28:35,649 | INFO     | job.realtimelogging is not enabled
[2026-02-05 01:29:13] 2026-02-05 06:28:35,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 01:29:13] 2026-02-05 06:28:35,702 | INFO     | aborting loop
[2026-02-05 01:29:13] 2026-02-05 06:28:35,759 | INFO     | all data control threads have been joined
[2026-02-05 01:29:13] 2026-02-05 06:28:35,790 | INFO     | all job control threads have been joined
[2026-02-05 01:29:13] 2026-02-05 06:28:36,062 | INFO     | [job] retrieve thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,063 | INFO     | [job] queue monitor thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,133 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,501 | INFO     | all payload control threads have been joined
[2026-02-05 01:29:13] 2026-02-05 06:28:36,655 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,708 | INFO     | [job] job monitor thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,722 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,760 | INFO     | [data] control thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,795 | INFO     | [job] control thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,813 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,889 | INFO     | [data] copytool_in thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:36,944 | INFO     | [job] validate thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:37,183 | INFO     | [data] copytool_out thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:37,317 | INFO     | [payload] validate_post thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:37,366 | INFO     | [payload] failed_post thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:37,504 | INFO     | [payload] control thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:28:38,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 01:29:13] 2026-02-05 06:28:42,274 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 01:29:13] 2026-02-05 06:29:04,901 | INFO     | PID=1773 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-05 01:29:13] 2026-02-05 06:29:04,902 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 01:29:13] 2026-02-05 06:29:04,902 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 01:29:13] 2026-02-05 06:29:04,902 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 01:29:13] 2026-02-05 06:29:07,899 | INFO     | [monitor] cgroup control has ended
[2026-02-05 01:29:13] 2026-02-05 06:29:07,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139980428281664)>', '<ExcThread(monitor, started 139979518879488)>']
[2026-02-05 01:29:13] 2026-02-05 06:29:07,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 01:29:13] 2026-02-05 06:29:07,918 | INFO     | [monitor] control thread has ended
[2026-02-05 01:29:13] 2026-02-05 06:29:12,925 | INFO     | all workflow threads have been joined
[2026-02-05 01:29:13] 2026-02-05 06:29:12,926 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 01:29:13] 2026-02-05 06:29:12,926 | INFO     | traces error code: 0
[2026-02-05 01:29:13] 2026-02-05 06:29:12,926 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 01:29:13] 2026-02-05 06:29:13,035 [wrapper] ==== pilot stdout END ====
[2026-02-05 01:29:13] 2026-02-05 06:29:13,040 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 01:29:13] 2026-02-05 06:29:13,044 [wrapper] pilotpid: 1773
[2026-02-05 01:29:13] 2026-02-05 06:29:13,049 [wrapper] Pilot exit status: 0
[2026-02-05 01:29:13] 2026-02-05 06:29:13,068 [wrapper] pandaids: 6999847303 6999847303
[2026-02-05 01:29:13] 2026-02-05 06:29:13,113 [wrapper] cleanup supervisor_pilot 24465 1774
[2026-02-05 01:29:13] 2026-02-05 06:29:13,118 [wrapper] Test setup, not cleaning
[2026-02-05 01:29:13] 2026-02-05 06:29:13,122 [wrapper] apfmon messages muted
[2026-02-05 01:29:13] 2026-02-05 06:29:13,127 [wrapper] ==== wrapper stdout END ====
[2026-02-05 01:29:13] 2026-02-05 06:29:13,132 [wrapper] ==== wrapper stderr END ====
[2026-02-05 01:29:13]  *** Error codes and diagnostics ***
[2026-02-05 01:29:13]     "exeErrorCode": 0,
[2026-02-05 01:29:13]     "exeErrorDiag": "",
[2026-02-05 01:29:13]     "pilotErrorCode": 0,
[2026-02-05 01:29:13]     "pilotErrorDiag": "",
[2026-02-05 01:29:13]  *** Listing of results directory ***
[2026-02-05 01:29:13] total 1159768
[2026-02-05 01:29:13] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas      5111 Feb  3 12:16 queuedata.json
[2026-02-05 01:29:13] -rwx------ 1 boincer umatlas     36322 Feb  3 12:16 runpilot2-wrapper.sh
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas    584422 Feb  3 12:17 pilot3.tar.gz
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas       100 Feb  4 21:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 01:29:13] -rwxr-xr-x 1 boincer umatlas      7986 Feb  4 21:46 run_atlas
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas       105 Feb  4 21:46 job.xml
[2026-02-05 01:29:13] -rw-r--r-- 3 boincer umatlas 495546556 Feb  4 21:46 EVNT.48317889._000230.pool.root.1
[2026-02-05 01:29:13] -rw-r--r-- 3 boincer umatlas 495546556 Feb  4 21:46 ATLAS.root_0
[2026-02-05 01:29:13] -rw-r--r-- 2 boincer umatlas     15845 Feb  4 21:46 start_atlas.sh
[2026-02-05 01:29:13] drwxrwx--x 2 boincer umatlas      4096 Feb  4 21:46 shared
[2026-02-05 01:29:13] -rw-r--r-- 2 boincer umatlas    597758 Feb  4 21:46 input.tar.gz
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas         0 Feb  4 21:46 boinc_lockfile
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas      2522 Feb  4 23:10 pandaJob.out
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas        57 Feb  4 23:10 setup.sh.local
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas   1009544 Feb  4 23:10 agis_schedconf.cvmfs.json
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas       432 Feb  4 23:10 workernode_map.json
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas      5911 Feb  5 01:21 init_data.xml
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas 189452732 Feb  5 01:27 HITS.48317892._012088.pool.root.1
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas       531 Feb  5 01:28 boinc_task_state.xml
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas      1048 Feb  5 01:28 memory_monitor_summary.json
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas   1511668 Feb  5 01:28 agis_ddmendpoints.agis.ALL.json
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas    386112 Feb  5 01:28 log.48317892._012088.job.log.tgz.1
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas      6406 Feb  5 01:28 heartbeat.json
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas      8192 Feb  5 01:28 boinc_mmap_file
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas        28 Feb  5 01:28 wrapper_checkpoint.txt
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas        96 Feb  5 01:29 pilot_heartbeat.json
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas      4813 Feb  5 01:29 pilotlog.txt
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas   1160023 Feb  5 01:29 log.48317892._012088.job.log.1
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas       357 Feb  5 01:29 output.list
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas       620 Feb  5 01:29 runtime_log
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas   1566720 Feb  5 01:29 result.tar.gz
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas       785 Feb  5 01:29 ZpfKDmqBZ78n9Rq4apOajLDm4fhM0noT9bVooX4SDmD7UKDmcNTb2m.diag
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas      9426 Feb  5 01:29 runtime_log.err
[2026-02-05 01:29:13] -rw-r--r-- 1 boincer umatlas     23128 Feb  5 01:29 stderr.txt
[2026-02-05 01:29:13] HITS file was successfully produced:
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas 189452732 Feb  5 01:27 shared/HITS.pool.root.1
[2026-02-05 01:29:13]  *** Contents of shared directory: ***
[2026-02-05 01:29:13] total 671092
[2026-02-05 01:29:13] -rw-r--r-- 3 boincer umatlas 495546556 Feb  4 21:46 ATLAS.root_0
[2026-02-05 01:29:13] -rw-r--r-- 2 boincer umatlas     15845 Feb  4 21:46 start_atlas.sh
[2026-02-05 01:29:13] -rw-r--r-- 2 boincer umatlas    597758 Feb  4 21:46 input.tar.gz
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas 189452732 Feb  5 01:27 HITS.pool.root.1
[2026-02-05 01:29:13] -rw------- 1 boincer umatlas   1566720 Feb  5 01:29 result.tar.gz
01:29:14 (30470): run_atlas exited; CPU time 60583.320948
01:29:14 (30470): called boinc_finish(0)

</stderr_txt>
]]>

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