Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:19:48 (349322): wrapper (7.7.26015): starting
16:19:48 (349322): wrapper: running run_atlas (--nthreads 12)
[2026-02-04 16:19:48] Arguments: --nthreads 12
[2026-02-04 16:19:48] Threads: 12
[2026-02-04 16:19:48] Checking for CVMFS
[2026-02-04 16:19:48] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 16:19:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 16:19:49] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 16:19:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 16:19:49] 2.13.3.0 6950 59463 158936 155878 2 54 33015071 39288833 6089 16776704 0 30663131 99.785 33868109 41454 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-04 16:19:49] CVMFS is ok
[2026-02-04 16:19:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 16:19:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 16:19:49] Further information can be found at the LHC@home message board.
[2026-02-04 16:19:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 16:19:49] Checking for apptainer binary...
[2026-02-04 16:19:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 16:19:49] Running /usr/bin/apptainer --version
[2026-02-04 16:19:49] apptainer version 1.4.5-2.el9
[2026-02-04 16:19:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 16:19:49] c-210-30.aglt2.org
[2026-02-04 16:19:49] apptainer works
[2026-02-04 16:19:49] Set ATHENA_PROC_NUMBER=12
[2026-02-04 16:19:49] Set ATHENA_CORE_NUMBER=12
[2026-02-04 16:19:49] Starting ATLAS job with PandaID=6993547514
[2026-02-04 16:19:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 19:52:40]  *** The last 200 lines of the pilot log: ***
[2026-02-04 19:52:41] 2026-02-05 00:51:55,212 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,212 | INFO     | log transfer has been attempted: DONE
[2026-02-04 19:52:41] 2026-02-05 00:51:55,213 | INFO     | job 6993547514 has finished - writing final server update
[2026-02-04 19:52:41] 2026-02-05 00:51:55,213 | INFO     | total number of processed events: 400 (read)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,230 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6993547514/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,231 | INFO     | extracted standard info from prmon json
[2026-02-04 19:52:41] 2026-02-05 00:51:55,231 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 19:52:41] 2026-02-05 00:51:55,231 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 19:52:41] 2026-02-05 00:51:55,237 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 19:52:41] 2026-02-05 00:51:55,237 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 19:52:41] 2026-02-05 00:51:55,247 | INFO     | fitting pss+swap vs Time
[2026-02-04 19:52:41] 2026-02-05 00:51:55,248 | INFO     | sum of square deviations: 2790687970.6105895
[2026-02-04 19:52:41] 2026-02-05 00:51:55,250 | INFO     | sum of deviations: -19758001343.78846
[2026-02-04 19:52:41] 2026-02-05 00:51:55,250 | INFO     | mean x: 1770246345.5817308
[2026-02-04 19:52:41] 2026-02-05 00:51:55,250 | INFO     | mean y: 2807076.6346153845
[2026-02-04 19:52:41] 2026-02-05 00:51:55,250 | INFO     | intersect: 12536107124.216698
[2026-02-04 19:52:41] 2026-02-05 00:51:55,251 | INFO     | chi2: 2.3186765609310727
[2026-02-04 19:52:41] 2026-02-05 00:51:55,251 | INFO     | sum of square deviations: 2594249484.738913
[2026-02-04 19:52:41] 2026-02-05 00:51:55,252 | INFO     | sum of deviations: -19175855602.15272
[2026-02-04 19:52:41] 2026-02-05 00:51:55,253 | INFO     | mean x: 1770246193.0788178
[2026-02-04 19:52:41] 2026-02-05 00:51:55,253 | INFO     | mean y: 2807536.197044335
[2026-02-04 19:52:41] 2026-02-05 00:51:55,253 | INFO     | intersect: 13087896529.538918
[2026-02-04 19:52:41] 2026-02-05 00:51:55,253 | INFO     | chi2: 2.3156447137111327
[2026-02-04 19:52:41] 2026-02-05 00:51:55,254 | INFO     | current chi2=2.3156447137111327 (change=0.13075766025437108 %)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,254 | INFO     | right removable region: 202
[2026-02-04 19:52:41] 2026-02-05 00:51:55,254 | INFO     | sum of square deviations: 2594187749.615759
[2026-02-04 19:52:41] 2026-02-05 00:51:55,256 | INFO     | sum of deviations: -65211390204.389175
[2026-02-04 19:52:41] 2026-02-05 00:51:55,256 | INFO     | mean x: 1770246498.1083744
[2026-02-04 19:52:41] 2026-02-05 00:51:55,256 | INFO     | mean y: 2842093.699507389
[2026-02-04 19:52:41] 2026-02-05 00:51:55,256 | INFO     | intersect: 44502410470.428314
[2026-02-04 19:52:41] 2026-02-05 00:51:55,257 | INFO     | chi2: 0.40417824772728783
[2026-02-04 19:52:41] 2026-02-05 00:51:55,257 | INFO     | current chi2=0.40417824772728783 (change=82.56858008841954 %)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,257 | INFO     | sum of square deviations: 2407129565.81817
[2026-02-04 19:52:41] 2026-02-05 00:51:55,259 | INFO     | sum of deviations: -73566614470.72731
[2026-02-04 19:52:41] 2026-02-05 00:51:55,259 | INFO     | mean x: 1770246650.6363637
[2026-02-04 19:52:41] 2026-02-05 00:51:55,259 | INFO     | mean y: 2848894.8232323234
[2026-02-04 19:52:41] 2026-02-05 00:51:55,259 | INFO     | intersect: 54105068698.34962
[2026-02-04 19:52:41] 2026-02-05 00:51:55,260 | INFO     | chi2: 0.29211862564843594
[2026-02-04 19:52:41] 2026-02-05 00:51:55,260 | INFO     | current chi2=0.29211862564843594 (change=27.7252976153388 %)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,260 | INFO     | sum of square deviations: 2229376995.0155582
[2026-02-04 19:52:41] 2026-02-05 00:51:55,262 | INFO     | sum of deviations: -67491672946.41456
[2026-02-04 19:52:41] 2026-02-05 00:51:55,262 | INFO     | mean x: 1770246803.1243522
[2026-02-04 19:52:41] 2026-02-05 00:51:55,262 | INFO     | mean y: 2843668.683937824
[2026-02-04 19:52:41] 2026-02-05 00:51:55,262 | INFO     | intersect: 53594909316.63457
[2026-02-04 19:52:41] 2026-02-05 00:51:55,263 | INFO     | chi2: 0.29079314041137316
[2026-02-04 19:52:41] 2026-02-05 00:51:55,263 | INFO     | current chi2=0.29079314041137316 (change=0.45374896383977636 %)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,263 | INFO     | left removable region: 30
[2026-02-04 19:52:41] 2026-02-05 00:51:55,263 | INFO     | sum of square deviations: 1577967796.186043
[2026-02-04 19:52:41] 2026-02-05 00:51:55,264 | INFO     | sum of deviations: -41690116102.720924
[2026-02-04 19:52:41] 2026-02-05 00:51:55,264 | INFO     | mean x: 1770247077.627907
[2026-02-04 19:52:41] 2026-02-05 00:51:55,265 | INFO     | mean y: 2821246.9418604653
[2026-02-04 19:52:41] 2026-02-05 00:51:55,265 | INFO     | intersect: 46772981179.98311
[2026-02-04 19:52:41] 2026-02-05 00:51:55,265 | INFO     | chi2: 0.2513966484931608
[2026-02-04 19:52:41] 2026-02-05 00:51:55,265 | INFO     | current memory leak: -26.42 B/s (using 172 data points, chi2=0.25)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,266 | INFO     | could have reported an average CPU frequency of 2599 MHz (11 samples)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,266 | INFO     | ..............................
[2026-02-04 19:52:41] 2026-02-05 00:51:55,266 | INFO     | . Timing measurements:
[2026-02-04 19:52:41] 2026-02-05 00:51:55,266 | INFO     | . get job = 0 s
[2026-02-04 19:52:41] 2026-02-05 00:51:55,266 | INFO     | . initial setup = 9 s
[2026-02-04 19:52:41] 2026-02-05 00:51:55,266 | INFO     | . payload setup = 10 s
[2026-02-04 19:52:41] 2026-02-05 00:51:55,266 | INFO     | . stage-in = 0 s
[2026-02-04 19:52:41] 2026-02-05 00:51:55,267 | INFO     | . payload execution = 12680 s
[2026-02-04 19:52:41] 2026-02-05 00:51:55,267 | INFO     | . stage-out = 3 s
[2026-02-04 19:52:41] 2026-02-05 00:51:55,267 | INFO     | . log creation = 0 s
[2026-02-04 19:52:41] 2026-02-05 00:51:55,267 | INFO     | ..............................
[2026-02-04 19:52:41] 2026-02-05 00:51:55,382 | INFO     | 
[2026-02-04 19:52:41] 2026-02-05 00:51:55,382 | INFO     | job summary report
[2026-02-04 19:52:41] 2026-02-05 00:51:55,382 | INFO     | --------------------------------------------------
[2026-02-04 19:52:41] 2026-02-05 00:51:55,382 | INFO     | PanDA job id: 6993547514
[2026-02-04 19:52:41] 2026-02-05 00:51:55,382 | INFO     | task id: 48395933
[2026-02-04 19:52:41] 2026-02-05 00:51:55,382 | INFO     | errors: (none)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | pilot state: finished 
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | transexitcode: 0
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | exeerrorcode: 0
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | exeerrordiag: 
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | exitcode: 0
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | exitmsg: OK
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | cpuconsumptiontime: 69392 s
[2026-02-04 19:52:41] 2026-02-05 00:51:55,383 | INFO     | nevents: 400
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | neventsw: 0
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | pid: 359020
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | pgrp: 359020
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | corecount: 12
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | event service: False
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | sizes: {0: 2277195, 1: 2278313, 2: 2278313, 12694: 2308453, 12697: 2317451, 12699: 2317507, 12702: 2317829}
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | --------------------------------------------------
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | 
[2026-02-04 19:52:41] 2026-02-05 00:51:55,384 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-04 19:52:41] 2026-02-05 00:51:55,522 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,522 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,523 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,523 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,523 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,523 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,523 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,523 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,523 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,523 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,524 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,525 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 19:52:41] 2026-02-05 00:51:55,529 | INFO     | job 6993547514 has completed (purged errors)
[2026-02-04 19:52:41] 2026-02-05 00:51:55,529 | INFO     | overall cleanup function is called
[2026-02-04 19:52:41] 2026-02-05 00:51:56,543 | INFO     | --- collectZombieJob: --- 10, [359020]
[2026-02-04 19:52:41] 2026-02-05 00:51:56,543 | INFO     | zombie collector waiting for pid 359020
[2026-02-04 19:52:41] 2026-02-05 00:51:56,543 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 19:52:41] 2026-02-05 00:51:56,543 | INFO     | collected zombie processes
[2026-02-04 19:52:41] 2026-02-05 00:51:56,543 | INFO     | will attempt to kill all subprocesses of pid=359020
[2026-02-04 19:52:41] 2026-02-05 00:51:57,079 | INFO     | process IDs to be killed: [359020] (in reverse order)
[2026-02-04 19:52:41] 2026-02-05 00:51:57,262 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 19:52:41] 2026-02-05 00:51:57,263 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 19:52:41] 2026-02-05 00:51:57,274 | INFO     | did not find any defunct processes belonging to 359020
[2026-02-04 19:52:41] 2026-02-05 00:51:57,292 | INFO     | did not find any defunct processes belonging to 359020
[2026-02-04 19:52:41] 2026-02-05 00:51:57,292 | INFO     | ready for new job
[2026-02-04 19:52:41] 2026-02-05 00:51:57,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 19:52:41] 2026-02-05 00:51:57,299 | INFO     | **************************************
[2026-02-04 19:52:41] 2026-02-05 00:51:57,299 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 19:52:41] 2026-02-05 00:51:57,299 | INFO     | **************************************
[2026-02-04 19:52:41] 2026-02-05 00:51:57,299 | INFO     | 
[2026-02-04 19:52:41] 2026-02-05 00:51:57,301 | INFO     | architecture information:
[2026-02-04 19:52:41] 2026-02-05 00:51:57,307 | INFO     | executing command: cat /etc/os-release
[2026-02-04 19:52:41] 2026-02-05 00:51:57,346 | INFO     | cat /etc/os-release:
[2026-02-04 19:52:41] NAME="CentOS Linux"
[2026-02-04 19:52:41] VERSION="7 (Core)"
[2026-02-04 19:52:41] ID="centos"
[2026-02-04 19:52:41] ID_LIKE="rhel fedora"
[2026-02-04 19:52:41] VERSION_ID="7"
[2026-02-04 19:52:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 19:52:41] ANSI_COLOR="0;31"
[2026-02-04 19:52:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 19:52:41] HOME_URL="https://www.centos.org/"
[2026-02-04 19:52:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 19:52:41] 
[2026-02-04 19:52:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 19:52:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 19:52:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 19:52:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 19:52:41] 
[2026-02-04 19:52:41] 2026-02-05 00:51:57,347 | INFO     | **************************************
[2026-02-04 19:52:41] 2026-02-05 00:51:57,850 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-04 19:52:41] 2026-02-05 00:51:57,933 | INFO     | sufficient remaining disk space (53630468096 B)
[2026-02-04 19:52:41] 2026-02-05 00:51:57,934 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 19:52:41] 2026-02-05 00:51:57,934 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 19:52:41] 2026-02-05 00:51:57,934 | INFO     | update_server=False
[2026-02-04 19:52:41] 2026-02-05 00:51:57,934 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 19:52:41] 2026-02-05 00:51:57,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 19:52:41] 2026-02-05 00:51:57,990 | INFO     | aborting loop
[2026-02-04 19:52:41] 2026-02-05 00:51:58,478 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 19:52:41] 2026-02-05 00:51:58,482 | INFO     | all job control threads have been joined
[2026-02-04 19:52:41] 2026-02-05 00:51:58,769 | INFO     | all data control threads have been joined
[2026-02-04 19:52:41] 2026-02-05 00:51:58,940 | INFO     | [job] retrieve thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:58,955 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:58,980 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 19:52:41] 2026-02-05 00:51:58,994 | INFO     | [data] copytool_in thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:58,996 | INFO     | [job] job monitor thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:59,014 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:59,223 | INFO     | all payload control threads have been joined
[2026-02-04 19:52:41] 2026-02-05 00:51:59,287 | INFO     | [job] validate thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:59,489 | INFO     | [job] control thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:59,645 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:59,774 | INFO     | [data] control thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:51:59,981 | INFO     | [payload] validate_post thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:52:00,165 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:52:00,229 | INFO     | [payload] control thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:52:00,256 | INFO     | [payload] failed_post thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:52:00,396 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 19:52:41] 2026-02-05 00:52:00,990 | INFO     | [data] copytool_out thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:52:01,401 | INFO     | [job] queue monitor thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:52:02,486 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 19:52:41] 2026-02-05 00:52:27,557 | INFO     | PID=353298 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 19:52:41] 2026-02-05 00:52:27,557 | INFO     | .. there are 6 such processes running
[2026-02-04 19:52:41] 2026-02-05 00:52:27,557 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 19:52:41] 2026-02-05 00:52:27,557 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 19:52:41] 2026-02-05 00:52:27,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 19:52:41] 2026-02-05 00:52:33,228 | INFO     | [monitor] cgroup control has ended
[2026-02-04 19:52:41] 2026-02-05 00:52:34,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140344306878272)>', '<ExcThread(monitor, started 140343945189120)>']
[2026-02-04 19:52:41] 2026-02-05 00:52:34,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 19:52:41] 2026-02-05 00:52:34,599 | INFO     | [monitor] control thread has ended
[2026-02-04 19:52:41] 2026-02-05 00:52:39,133 | INFO     | all workflow threads have been joined
[2026-02-04 19:52:41] 2026-02-05 00:52:39,133 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 19:52:41] 2026-02-05 00:52:39,133 | INFO     | traces error code: 0
[2026-02-04 19:52:41] 2026-02-05 00:52:39,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 19:52:41] 2026-02-05 00:52:39,440 [wrapper] ==== pilot stdout END ====
[2026-02-04 19:52:41] 2026-02-05 00:52:39,487 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 19:52:41] 2026-02-05 00:52:39,531 [wrapper] pilotpid: 353298
[2026-02-04 19:52:41] 2026-02-05 00:52:39,574 [wrapper] Pilot exit status: 0
[2026-02-04 19:52:41] 2026-02-05 00:52:39,821 [wrapper] pandaids: 6993547514
[2026-02-04 19:52:41] 2026-02-05 00:52:40,169 [wrapper] cleanup supervisor_pilot  655947 353299
[2026-02-04 19:52:41] 2026-02-05 00:52:40,223 [wrapper] Test setup, not cleaning
[2026-02-04 19:52:41] 2026-02-05 00:52:40,254 [wrapper] apfmon messages muted
[2026-02-04 19:52:41] 2026-02-05 00:52:40,293 [wrapper] ==== wrapper stdout END ====
[2026-02-04 19:52:41] 2026-02-05 00:52:40,329 [wrapper] ==== wrapper stderr END ====
[2026-02-04 19:52:41]  *** Error codes and diagnostics ***
[2026-02-04 19:52:41]     "exeErrorCode": 0,
[2026-02-04 19:52:41]     "exeErrorDiag": "",
[2026-02-04 19:52:41]     "pilotErrorCode": 0,
[2026-02-04 19:52:41]     "pilotErrorDiag": "",
[2026-02-04 19:52:41]  *** Listing of results directory ***
[2026-02-04 19:52:41] total 506624
[2026-02-04 19:52:41] -rwx------. 1 boincer umatlas     36322 Feb  2 10:55 runpilot2-wrapper.sh
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 10:56 pilot3.tar.gz
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas      5111 Feb  2 10:59 queuedata.json
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas       100 Feb  4 16:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 19:52:41] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  4 16:19 run_atlas
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas       105 Feb  4 16:19 job.xml
[2026-02-04 19:52:41] -rw-r--r--. 2 boincer umatlas 298546649 Feb  4 16:19 EVNT.48395931._000010.pool.root.1
[2026-02-04 19:52:41] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 16:19 start_atlas.sh
[2026-02-04 19:52:41] drwxrwx--x. 2 boincer umatlas      4096 Feb  4 16:19 shared
[2026-02-04 19:52:41] -rw-r--r--. 2 boincer umatlas    597749 Feb  4 16:19 input.tar.gz
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas         0 Feb  4 16:19 boinc_lockfile
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas      2534 Feb  4 16:19 pandaJob.out
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas        57 Feb  4 16:19 setup.sh.local
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas   1009560 Feb  4 16:20 agis_schedconf.cvmfs.json
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas       442 Feb  4 16:20 workernode_map.json
[2026-02-04 19:52:41] drwx------. 5 boincer umatlas      4096 Feb  4 16:20 pilot3
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas      6661 Feb  4 19:45 init_data.xml
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas 211840867 Feb  4 19:50 HITS.48395933._000238.pool.root.1
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas       530 Feb  4 19:51 boinc_task_state.xml
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas      1038 Feb  4 19:51 memory_monitor_summary.json
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas   1511668 Feb  4 19:51 agis_ddmendpoints.agis.ALL.json
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas    503331 Feb  4 19:51 log.48395933._000238.job.log.tgz.1
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas        95 Feb  4 19:51 pilot_heartbeat.json
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas      6397 Feb  4 19:51 heartbeat.json
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 19:52 boinc_mmap_file
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas        28 Feb  4 19:52 wrapper_checkpoint.txt
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas      4818 Feb  4 19:52 pilotlog.txt
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas   1725087 Feb  4 19:52 log.48395933._000238.job.log.1
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas       357 Feb  4 19:52 output.list
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas       620 Feb  4 19:52 runtime_log
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas   2242560 Feb  4 19:52 result.tar.gz
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas      9344 Feb  4 19:52 runtime_log.err
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas       656 Feb  4 19:52 GhnKDm3RB78n9Rq4apOajLDm4fhM0noT9bVooX4SDmqnSKDmhwRJnn.diag
[2026-02-04 19:52:41] -rw-r--r--. 1 boincer umatlas     21146 Feb  4 19:52 stderr.txt
[2026-02-04 19:52:41] HITS file was successfully produced:
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas 211840867 Feb  4 19:50 shared/HITS.pool.root.1
[2026-02-04 19:52:41]  *** Contents of shared directory: ***
[2026-02-04 19:52:41] total 501224
[2026-02-04 19:52:41] -rw-r--r--. 2 boincer umatlas 298546649 Feb  4 16:19 ATLAS.root_0
[2026-02-04 19:52:41] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 16:19 start_atlas.sh
[2026-02-04 19:52:41] -rw-r--r--. 2 boincer umatlas    597749 Feb  4 16:19 input.tar.gz
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas 211840867 Feb  4 19:50 HITS.pool.root.1
[2026-02-04 19:52:41] -rw-------. 1 boincer umatlas   2242560 Feb  4 19:52 result.tar.gz
19:52:43 (349322): run_atlas exited; CPU time 69566.150484
19:52:43 (349322): called boinc_finish(0)

</stderr_txt>
]]>

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