Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:46:17 (7352): wrapper (7.7.26015): starting
15:46:17 (7352): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 15:46:17] Arguments: --nthreads 8
[2026-02-04 15:46:17] Threads: 8
[2026-02-04 15:46:17] Checking for CVMFS
[2026-02-04 15:46:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 15:46:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 15:46:18] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 15:46:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 15:46:18] 2.11.2.0 2873 161697 96560 155877 3 1 12700040 20275200 1 130560 0 44693331 99.857 9941261 32102 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-04 15:46:18] CVMFS is ok
[2026-02-04 15:46:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 15:46:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 15:46:18] Further information can be found at the LHC@home message board.
[2026-02-04 15:46:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 15:46:18] Checking for apptainer binary...
[2026-02-04 15:46:18] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 15:46:18] Running /usr/bin/apptainer --version
[2026-02-04 15:46:18] apptainer version 1.3.2-1.el7
[2026-02-04 15:46:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 15:46:19] c-115-13.aglt2.org
[2026-02-04 15:46:19] apptainer works
[2026-02-04 15:46:19] Set ATHENA_PROC_NUMBER=8
[2026-02-04 15:46:19] Set ATHENA_CORE_NUMBER=8
[2026-02-04 15:46:19] Starting ATLAS job with PandaID=6994523771
[2026-02-04 15:46:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 17:27:59]  *** The last 200 lines of the pilot log: ***
[2026-02-04 17:27:59]  filetype=log
[2026-02-04 17:27:59]  guid=63910133-c5d7-474b-83fb-5ce281527785
[2026-02-04 17:27:59]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-04 17:27:59]  is_altstaged=None
[2026-02-04 17:27:59]  is_tar=False
[2026-02-04 17:27:59]  lfn=log.48310749._004169.job.log.tgz.1
[2026-02-04 17:27:59]  mtime=0
[2026-02-04 17:27:59]  protocol_id=None
[2026-02-04 17:27:59]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 17:27:59]  replicas=None
[2026-02-04 17:27:59]  scope=mc23_13p6TeV
[2026-02-04 17:27:59]  status=None
[2026-02-04 17:27:59]  status_code=0
[2026-02-04 17:27:59]  storage_token=
[2026-02-04 17:27:59]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6994523771/log.48310749._004169.job.log.tgz.1
[2026-02-04 17:27:59]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/93/log.48310749._004169.job.log.tgz.1
[2026-02-04 17:27:59]  workdir=None
[2026-02-04 17:27:59] ]
[2026-02-04 17:27:59] 2026-02-04 22:27:04,938 | INFO     | transferring file log.48310749._004169.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6994523771/log.48310749._004169.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-04 17:27:59] 2026-02-04 22:27:04,938 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6994523771/log.48310749._004169.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310749._004169.job
[2026-02-04 17:27:59] 2026-02-04 22:27:04,965 | INFO     | adding to output.list: log.48310749._004169.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/93/log.48310749._004169.job.log.tg
[2026-02-04 17:27:59] 2026-02-04 22:27:04,966 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 17:27:59] 2026-02-04 22:27:04,966 | INFO     | summary of transferred files:
[2026-02-04 17:27:59] 2026-02-04 22:27:04,966 | INFO     |  -- lfn=log.48310749._004169.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 17:27:59] 2026-02-04 22:27:04,966 | INFO     | stage-out finished correctly
[2026-02-04 17:27:59] 2026-02-04 22:27:05,020 | INFO     | time since job start (6021s) is within the limit (349056.0s)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,032 | INFO     | time since job start (6023s) is within the limit (349056.0s)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,145 | INFO     | monitor loop #456: job 0:6994523771 is in state 'finished'
[2026-02-04 17:27:59] 2026-02-04 22:27:07,146 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,542 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 17:27:59] 2026-02-04 22:27:07,616 | INFO     | job 6994523771 has state=finished
[2026-02-04 17:27:59] 2026-02-04 22:27:07,617 | INFO     | preparing for final server update for job 6994523771 in state='finished'
[2026-02-04 17:27:59] 2026-02-04 22:27:07,617 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6994523771/jobReport.json
[2026-02-04 17:27:59] 2026-02-04 22:27:07,620 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-04 17:27:59] 2026-02-04 22:27:07,621 | INFO     | this job has now completed (state=finished)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,621 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,621 | INFO     | log transfer has been attempted: DONE
[2026-02-04 17:27:59] 2026-02-04 22:27:07,621 | INFO     | job 6994523771 has finished - writing final server update
[2026-02-04 17:27:59] 2026-02-04 22:27:07,622 | INFO     | total number of processed events: 400 (read)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,624 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994523771/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,624 | INFO     | extracted standard info from prmon json
[2026-02-04 17:27:59] 2026-02-04 22:27:07,625 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 17:27:59] 2026-02-04 22:27:07,625 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 17:27:59] 2026-02-04 22:27:07,625 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 17:27:59] 2026-02-04 22:27:07,625 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 17:27:59] 2026-02-04 22:27:07,627 | INFO     | fitting pss+swap vs Time
[2026-02-04 17:27:59] 2026-02-04 22:27:07,628 | INFO     | sum of square deviations: 241429643.0
[2026-02-04 17:27:59] 2026-02-04 22:27:07,628 | INFO     | sum of deviations: -13859873927.999998
[2026-02-04 17:27:59] 2026-02-04 22:27:07,628 | INFO     | mean x: 1770241110.5
[2026-02-04 17:27:59] 2026-02-04 22:27:07,628 | INFO     | mean y: 2593825.847826087
[2026-02-04 17:27:59] 2026-02-04 22:27:07,629 | INFO     | intersect: 101627722823.3368
[2026-02-04 17:27:59] 2026-02-04 22:27:07,629 | INFO     | chi2: 0.09107721305844105
[2026-02-04 17:27:59] 2026-02-04 22:27:07,629 | INFO     | current memory leak: -57.41 B/s (using 92 data points, chi2=0.09)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,630 | INFO     | could have reported an average CPU frequency of 1745 MHz (7 samples)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,630 | INFO     | ..............................
[2026-02-04 17:27:59] 2026-02-04 22:27:07,630 | INFO     | . Timing measurements:
[2026-02-04 17:27:59] 2026-02-04 22:27:07,630 | INFO     | . get job = 0 s
[2026-02-04 17:27:59] 2026-02-04 22:27:07,630 | INFO     | . initial setup = 8 s
[2026-02-04 17:27:59] 2026-02-04 22:27:07,630 | INFO     | . payload setup = 8 s
[2026-02-04 17:27:59] 2026-02-04 22:27:07,631 | INFO     | . stage-in = 0 s
[2026-02-04 17:27:59] 2026-02-04 22:27:07,631 | INFO     | . payload execution = 5996 s
[2026-02-04 17:27:59] 2026-02-04 22:27:07,631 | INFO     | . stage-out = 0 s
[2026-02-04 17:27:59] 2026-02-04 22:27:07,631 | INFO     | . log creation = 0 s
[2026-02-04 17:27:59] 2026-02-04 22:27:07,631 | INFO     | ..............................
[2026-02-04 17:27:59] 2026-02-04 22:27:07,707 | INFO     | 
[2026-02-04 17:27:59] 2026-02-04 22:27:07,707 | INFO     | job summary report
[2026-02-04 17:27:59] 2026-02-04 22:27:07,707 | INFO     | --------------------------------------------------
[2026-02-04 17:27:59] 2026-02-04 22:27:07,707 | INFO     | PanDA job id: 6994523771
[2026-02-04 17:27:59] 2026-02-04 22:27:07,707 | INFO     | task id: 48310749
[2026-02-04 17:27:59] 2026-02-04 22:27:07,708 | INFO     | errors: (none)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,708 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 17:27:59] 2026-02-04 22:27:07,708 | INFO     | pilot state: finished 
[2026-02-04 17:27:59] 2026-02-04 22:27:07,708 | INFO     | transexitcode: 0
[2026-02-04 17:27:59] 2026-02-04 22:27:07,708 | INFO     | exeerrorcode: 0
[2026-02-04 17:27:59] 2026-02-04 22:27:07,708 | INFO     | exeerrordiag: 
[2026-02-04 17:27:59] 2026-02-04 22:27:07,709 | INFO     | exitcode: 0
[2026-02-04 17:27:59] 2026-02-04 22:27:07,709 | INFO     | exitmsg: OK
[2026-02-04 17:27:59] 2026-02-04 22:27:07,709 | INFO     | cpuconsumptiontime: 44481 s
[2026-02-04 17:27:59] 2026-02-04 22:27:07,709 | INFO     | nevents: 400
[2026-02-04 17:27:59] 2026-02-04 22:27:07,709 | INFO     | neventsw: 0
[2026-02-04 17:27:59] 2026-02-04 22:27:07,709 | INFO     | pid: 15912
[2026-02-04 17:27:59] 2026-02-04 22:27:07,710 | INFO     | pgrp: 15912
[2026-02-04 17:27:59] 2026-02-04 22:27:07,710 | INFO     | corecount: 8
[2026-02-04 17:27:59] 2026-02-04 22:27:07,710 | INFO     | event service: False
[2026-02-04 17:27:59] 2026-02-04 22:27:07,710 | INFO     | sizes: {0: 2277131, 1: 2278249, 12: 2278249, 6007: 2304972, 6008: 2304971, 6009: 2314025, 6012: 2314403}
[2026-02-04 17:27:59] 2026-02-04 22:27:07,710 | INFO     | --------------------------------------------------
[2026-02-04 17:27:59] 2026-02-04 22:27:07,710 | INFO     | 
[2026-02-04 17:27:59] 2026-02-04 22:27:07,711 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-04 17:27:59] 2026-02-04 22:27:07,743 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,743 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,744 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,744 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,744 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,744 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,744 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,744 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,745 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,745 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,745 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,745 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,745 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,746 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,746 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,746 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,746 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,746 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,746 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,747 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 17:27:59] 2026-02-04 22:27:07,747 | INFO     | job 6994523771 has completed (purged errors)
[2026-02-04 17:27:59] 2026-02-04 22:27:07,747 | INFO     | overall cleanup function is called
[2026-02-04 17:27:59] 2026-02-04 22:27:08,755 | INFO     | --- collectZombieJob: --- 10, [15912]
[2026-02-04 17:27:59] 2026-02-04 22:27:08,756 | INFO     | zombie collector waiting for pid 15912
[2026-02-04 17:27:59] 2026-02-04 22:27:08,756 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 17:27:59] 2026-02-04 22:27:08,756 | INFO     | collected zombie processes
[2026-02-04 17:27:59] 2026-02-04 22:27:08,756 | INFO     | will attempt to kill all subprocesses of pid=15912
[2026-02-04 17:27:59] 2026-02-04 22:27:08,837 | INFO     | process IDs to be killed: [15912] (in reverse order)
[2026-02-04 17:27:59] 2026-02-04 22:27:08,889 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 17:27:59] 2026-02-04 22:27:08,889 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 17:27:59] 2026-02-04 22:27:08,893 | INFO     | did not find any defunct processes belonging to 15912
[2026-02-04 17:27:59] 2026-02-04 22:27:08,896 | INFO     | did not find any defunct processes belonging to 15912
[2026-02-04 17:27:59] 2026-02-04 22:27:08,896 | INFO     | ready for new job
[2026-02-04 17:27:59] 2026-02-04 22:27:08,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 17:27:59] 2026-02-04 22:27:08,898 | INFO     | **************************************
[2026-02-04 17:27:59] 2026-02-04 22:27:08,898 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 17:27:59] 2026-02-04 22:27:08,898 | INFO     | **************************************
[2026-02-04 17:27:59] 2026-02-04 22:27:08,898 | INFO     | 
[2026-02-04 17:27:59] 2026-02-04 22:27:08,899 | INFO     | architecture information:
[2026-02-04 17:27:59] 2026-02-04 22:27:08,899 | INFO     | executing command: cat /etc/os-release
[2026-02-04 17:27:59] 2026-02-04 22:27:08,918 | INFO     | cat /etc/os-release:
[2026-02-04 17:27:59] NAME="CentOS Linux"
[2026-02-04 17:27:59] VERSION="7 (Core)"
[2026-02-04 17:27:59] ID="centos"
[2026-02-04 17:27:59] ID_LIKE="rhel fedora"
[2026-02-04 17:27:59] VERSION_ID="7"
[2026-02-04 17:27:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 17:27:59] ANSI_COLOR="0;31"
[2026-02-04 17:27:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 17:27:59] HOME_URL="https://www.centos.org/"
[2026-02-04 17:27:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 17:27:59] 
[2026-02-04 17:27:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 17:27:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 17:27:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 17:27:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 17:27:59] 
[2026-02-04 17:27:59] 2026-02-04 22:27:08,918 | INFO     | **************************************
[2026-02-04 17:27:59] 2026-02-04 22:27:09,421 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-04 17:27:59] 2026-02-04 22:27:09,441 | INFO     | sufficient remaining disk space (18038652928 B)
[2026-02-04 17:27:59] 2026-02-04 22:27:09,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 17:27:59] 2026-02-04 22:27:09,442 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 17:27:59] 2026-02-04 22:27:09,442 | INFO     | update_server=False
[2026-02-04 17:27:59] 2026-02-04 22:27:09,442 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 17:27:59] 2026-02-04 22:27:09,442 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 17:27:59] 2026-02-04 22:27:09,443 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 17:27:59] 2026-02-04 22:27:09,599 | INFO     | all job control threads have been joined
[2026-02-04 17:27:59] 2026-02-04 22:27:09,648 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 17:27:59] 2026-02-04 22:27:09,648 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 17:27:59] 2026-02-04 22:27:09,649 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 17:27:59] 2026-02-04 22:27:09,649 | INFO     | will abort loop
[2026-02-04 17:27:59] 2026-02-04 22:27:10,447 | INFO     | [job] queue monitor thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:10,448 | INFO     | [job] retrieve thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:10,452 | INFO     | all data control threads have been joined
[2026-02-04 17:27:59] 2026-02-04 22:27:10,470 | INFO     | all payload control threads have been joined
[2026-02-04 17:27:59] 2026-02-04 22:27:10,522 | INFO     | [payload] failed_post thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:10,565 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 17:27:59] 2026-02-04 22:27:10,605 | INFO     | [job] control thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:10,654 | INFO     | [job] job monitor thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:10,915 | INFO     | [job] validate thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:10,915 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:10,968 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:11,073 | INFO     | [payload] validate_post thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:11,114 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:11,458 | INFO     | [data] control thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:11,473 | INFO     | [payload] control thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:11,641 | INFO     | [data] copytool_in thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:11,908 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:12,570 | INFO     | [data] copytool_out thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:13,449 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 17:27:59] 2026-02-04 22:27:40,232 | INFO     | PID=11462 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-02-04 17:27:59] 2026-02-04 22:27:40,232 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 17:27:59] 2026-02-04 22:27:40,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 17:27:59] 2026-02-04 22:27:40,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 17:27:59] 2026-02-04 22:27:53,251 | INFO     | [monitor] cgroup control has ended
[2026-02-04 17:27:59] 2026-02-04 22:27:54,594 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140558508402496)>', '<ExcThread(monitor, started 140557527525120)>']
[2026-02-04 17:27:59] 2026-02-04 22:27:55,306 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 17:27:59] 2026-02-04 22:27:55,306 | INFO     | [monitor] control thread has ended
[2026-02-04 17:27:59] 2026-02-04 22:27:59,619 | INFO     | all workflow threads have been joined
[2026-02-04 17:27:59] 2026-02-04 22:27:59,620 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 17:27:59] 2026-02-04 22:27:59,620 | INFO     | traces error code: 0
[2026-02-04 17:27:59] 2026-02-04 22:27:59,620 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 17:27:59] 2026-02-04 22:27:59,708 [wrapper] ==== pilot stdout END ====
[2026-02-04 17:27:59] 2026-02-04 22:27:59,712 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 17:27:59] 2026-02-04 22:27:59,717 [wrapper] pilotpid: 11462
[2026-02-04 17:27:59] 2026-02-04 22:27:59,721 [wrapper] Pilot exit status: 0
[2026-02-04 17:27:59] 2026-02-04 22:27:59,738 [wrapper] pandaids: 6994523771
[2026-02-04 17:27:59] 2026-02-04 22:27:59,787 [wrapper] cleanup supervisor_pilot 17719 11463
[2026-02-04 17:27:59] 2026-02-04 22:27:59,792 [wrapper] Test setup, not cleaning
[2026-02-04 17:27:59] 2026-02-04 22:27:59,797 [wrapper] apfmon messages muted
[2026-02-04 17:27:59] 2026-02-04 22:27:59,801 [wrapper] ==== wrapper stdout END ====
[2026-02-04 17:27:59] 2026-02-04 22:27:59,807 [wrapper] ==== wrapper stderr END ====
[2026-02-04 17:27:59]  *** Error codes and diagnostics ***
[2026-02-04 17:27:59]     "exeErrorCode": 0,
[2026-02-04 17:27:59]     "exeErrorDiag": "",
[2026-02-04 17:27:59]     "pilotErrorCode": 0,
[2026-02-04 17:27:59]     "pilotErrorDiag": "",
[2026-02-04 17:27:59]  *** Listing of results directory ***
[2026-02-04 17:27:59] total 660324
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas    584422 Feb  3 16:56 pilot3.tar.gz
[2026-02-04 17:27:59] -rwx------ 1 boincer umatlas     36322 Feb  3 16:57 runpilot2-wrapper.sh
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas      5111 Feb  3 16:58 queuedata.json
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas       100 Feb  4 15:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 17:27:59] -rwxr-xr-x 1 boincer umatlas      7986 Feb  4 15:46 run_atlas
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas       105 Feb  4 15:46 job.xml
[2026-02-04 17:27:59] -rw-r--r-- 2 boincer umatlas 491590093 Feb  4 15:46 EVNT.48310747._000084.pool.root.1
[2026-02-04 17:27:59] -rw-r--r-- 2 boincer umatlas     15845 Feb  4 15:46 start_atlas.sh
[2026-02-04 17:27:59] drwxrwx--x 2 boincer umatlas      4096 Feb  4 15:46 shared
[2026-02-04 17:27:59] -rw-r--r-- 2 boincer umatlas    597757 Feb  4 15:46 input.tar.gz
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas         0 Feb  4 15:46 boinc_lockfile
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas      2522 Feb  4 15:46 pandaJob.out
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas        57 Feb  4 15:46 setup.sh.local
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas   1009552 Feb  4 15:46 agis_schedconf.cvmfs.json
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas   1511668 Feb  4 15:46 agis_ddmendpoints.agis.ALL.json
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas       432 Feb  4 15:46 workernode_map.json
[2026-02-04 17:27:59] drwx------ 5 boincer umatlas      4096 Feb  4 15:46 pilot3
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas 178220379 Feb  4 17:26 HITS.48310749._004169.pool.root.1
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas       531 Feb  4 17:26 boinc_task_state.xml
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas        95 Feb  4 17:26 pilot_heartbeat.json
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas      1047 Feb  4 17:27 memory_monitor_summary.json
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas    351674 Feb  4 17:27 log.48310749._004169.job.log.tgz.1
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas      6401 Feb  4 17:27 heartbeat.json
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas      5910 Feb  4 17:27 init_data.xml
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas      8192 Feb  4 17:27 boinc_mmap_file
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas        27 Feb  4 17:27 wrapper_checkpoint.txt
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas      4928 Feb  4 17:27 pilotlog.txt
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas    859474 Feb  4 17:27 log.48310749._004169.job.log.1
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas       357 Feb  4 17:27 output.list
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas       620 Feb  4 17:27 runtime_log
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas   1228800 Feb  4 17:27 result.tar.gz
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas      9341 Feb  4 17:27 runtime_log.err
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas       658 Feb  4 17:27 cOPLDmwZd78n9Rq4apOajLDm4fhM0noT9bVooX4SDmnWVKDmuIiVNm.diag
[2026-02-04 17:27:59] -rw-r--r-- 1 boincer umatlas     21285 Feb  4 17:27 stderr.txt
[2026-02-04 17:27:59] HITS file was successfully produced:
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas 178220379 Feb  4 17:26 shared/HITS.pool.root.1
[2026-02-04 17:27:59]  *** Contents of shared directory: ***
[2026-02-04 17:27:59] total 655920
[2026-02-04 17:27:59] -rw-r--r-- 2 boincer umatlas 491590093 Feb  4 15:46 ATLAS.root_0
[2026-02-04 17:27:59] -rw-r--r-- 2 boincer umatlas     15845 Feb  4 15:46 start_atlas.sh
[2026-02-04 17:27:59] -rw-r--r-- 2 boincer umatlas    597757 Feb  4 15:46 input.tar.gz
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas 178220379 Feb  4 17:26 HITS.pool.root.1
[2026-02-04 17:27:59] -rw------- 1 boincer umatlas   1228800 Feb  4 17:27 result.tar.gz
17:28:01 (7352): run_atlas exited; CPU time 44463.206424
17:28:01 (7352): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN