Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:31:03 (3784106): wrapper (7.7.26015): starting
14:31:03 (3784106): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 14:31:03] Arguments: --nthreads 8
[2026-02-04 14:31:03] Threads: 8
[2026-02-04 14:31:03] Checking for CVMFS
[2026-02-04 14:31:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 14:31:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 14:31:03] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 14:31:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 14:31:04] 2.13.3.0 12525 131137 246712 155876 3 262 29822128 40960001 27997 16776704 0 754710593 99.678 667981364 36256 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-04 14:31:04] CVMFS is ok
[2026-02-04 14:31:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 14:31:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 14:31:04] Further information can be found at the LHC@home message board.
[2026-02-04 14:31:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 14:31:04] Checking for apptainer binary...
[2026-02-04 14:31:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 14:31:04] Running /usr/bin/apptainer --version
[2026-02-04 14:31:04] apptainer version 1.4.5-2.el9
[2026-02-04 14:31:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 14:31:04] c7-4-30.aglt2.org
[2026-02-04 14:31:04] apptainer works
[2026-02-04 14:31:04] Set ATHENA_PROC_NUMBER=8
[2026-02-04 14:31:04] Set ATHENA_CORE_NUMBER=8
[2026-02-04 14:31:04] Starting ATLAS job with PandaID=6994615759
[2026-02-04 14:31:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 15:49:35]  *** The last 200 lines of the pilot log: ***
[2026-02-04 15:49:35]  guid=fbab36d3-51fd-40ba-826e-803192ed1863
[2026-02-04 15:49:35]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-04 15:49:35]  is_altstaged=None
[2026-02-04 15:49:35]  is_tar=False
[2026-02-04 15:49:35]  lfn=log.48318018._001618.job.log.tgz.1
[2026-02-04 15:49:35]  mtime=0
[2026-02-04 15:49:35]  protocol_id=None
[2026-02-04 15:49:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 15:49:35]  replicas=None
[2026-02-04 15:49:35]  scope=mc23_13p6TeV
[2026-02-04 15:49:35]  status=None
[2026-02-04 15:49:35]  status_code=0
[2026-02-04 15:49:35]  storage_token=
[2026-02-04 15:49:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6994615759/log.48318018._001618.job.log.tgz.1
[2026-02-04 15:49:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/66/log.48318018._001618.job.log.tgz.1
[2026-02-04 15:49:35]  workdir=None
[2026-02-04 15:49:35] ]
[2026-02-04 15:49:35] 2026-02-04 20:48:32,394 | INFO     | transferring file log.48318018._001618.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6994615759/log.48318018._001618.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-02-04 15:49:35] 2026-02-04 20:48:32,394 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6994615759/log.48318018._001618.job.log.tgz.1 /tmp/boinchome/slots/0/log.48318018._001618.job
[2026-02-04 15:49:35] 2026-02-04 20:48:32,415 | INFO     | adding to output.list: log.48318018._001618.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/89/66/log.48318018._001618.job.log.tg
[2026-02-04 15:49:35] 2026-02-04 20:48:32,415 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 15:49:35] 2026-02-04 20:48:32,415 | INFO     | summary of transferred files:
[2026-02-04 15:49:35] 2026-02-04 20:48:32,416 | INFO     |  -- lfn=log.48318018._001618.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 15:49:35] 2026-02-04 20:48:32,416 | INFO     | stage-out finished correctly
[2026-02-04 15:49:35] 2026-02-04 20:48:33,380 | INFO     | time since job start (4632s) is within the limit (349056.0s)
[2026-02-04 15:49:35] 2026-02-04 20:48:33,401 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 15:49:35] 2026-02-04 20:48:34,263 | INFO     | monitor loop #334: job 0:6994615759 is in state 'finished'
[2026-02-04 15:49:35] 2026-02-04 20:48:34,263 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,272 | INFO     | job 6994615759 has state=finished
[2026-02-04 15:49:35] 2026-02-04 20:48:34,273 | INFO     | preparing for final server update for job 6994615759 in state='finished'
[2026-02-04 15:49:35] 2026-02-04 20:48:34,273 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6994615759/jobReport.json
[2026-02-04 15:49:35] 2026-02-04 20:48:34,275 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-02-04 15:49:35] 2026-02-04 20:48:34,276 | INFO     | this job has now completed (state=finished)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,276 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,276 | INFO     | log transfer has been attempted: DONE
[2026-02-04 15:49:35] 2026-02-04 20:48:34,276 | INFO     | job 6994615759 has finished - writing final server update
[2026-02-04 15:49:35] 2026-02-04 20:48:34,276 | INFO     | total number of processed events: 400 (read)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,289 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994615759/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,290 | INFO     | extracted standard info from prmon json
[2026-02-04 15:49:35] 2026-02-04 20:48:34,290 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 15:49:35] 2026-02-04 20:48:34,290 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 15:49:35] 2026-02-04 20:48:34,290 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 15:49:35] 2026-02-04 20:48:34,290 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 15:49:35] 2026-02-04 20:48:34,292 | INFO     | fitting pss+swap vs Time
[2026-02-04 15:49:35] 2026-02-04 20:48:34,292 | INFO     | sum of square deviations: 101843770.0
[2026-02-04 15:49:35] 2026-02-04 20:48:34,292 | INFO     | sum of deviations: -11909994043.999998
[2026-02-04 15:49:35] 2026-02-04 20:48:34,292 | INFO     | mean x: 1770235884.0
[2026-02-04 15:49:35] 2026-02-04 20:48:34,292 | INFO     | mean y: 2854033.6666666665
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | intersect: 207020905652.48508
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | chi2: 0.1385554924414182
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | current memory leak: -116.94 B/s (using 69 data points, chi2=0.14)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | could have reported an average CPU frequency of 3169 MHz (6 samples)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | ..............................
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | . Timing measurements:
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | . get job = 0 s
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | . initial setup = 7 s
[2026-02-04 15:49:35] 2026-02-04 20:48:34,293 | INFO     | . payload setup = 7 s
[2026-02-04 15:49:35] 2026-02-04 20:48:34,294 | INFO     | . stage-in = 0 s
[2026-02-04 15:49:35] 2026-02-04 20:48:34,294 | INFO     | . payload execution = 4607 s
[2026-02-04 15:49:35] 2026-02-04 20:48:34,294 | INFO     | . stage-out = 0 s
[2026-02-04 15:49:35] 2026-02-04 20:48:34,294 | INFO     | . log creation = 0 s
[2026-02-04 15:49:35] 2026-02-04 20:48:34,294 | INFO     | ..............................
[2026-02-04 15:49:35] 2026-02-04 20:48:34,358 | INFO     | 
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | job summary report
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | --------------------------------------------------
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | PanDA job id: 6994615759
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | task id: 48318018
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | errors: (none)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | pilot state: finished 
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | transexitcode: 0
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | exeerrorcode: 0
[2026-02-04 15:49:35] 2026-02-04 20:48:34,359 | INFO     | exeerrordiag: 
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | exitcode: 0
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | exitmsg: OK
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | cpuconsumptiontime: 31216 s
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | nevents: 400
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | neventsw: 0
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | pid: 3794952
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | pgrp: 3794952
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | corecount: 8
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | event service: False
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | sizes: {0: 2278269, 11: 2278269, 4618: 2304238, 4619: 2313264, 4620: 2313320, 4621: 2313514}
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | --------------------------------------------------
[2026-02-04 15:49:35] 2026-02-04 20:48:34,360 | INFO     | 
[2026-02-04 15:49:35] 2026-02-04 20:48:34,361 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-04 15:49:35] 2026-02-04 20:48:34,386 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,386 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,386 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,386 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,388 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 15:49:35] 2026-02-04 20:48:34,388 | INFO     | job 6994615759 has completed (purged errors)
[2026-02-04 15:49:35] 2026-02-04 20:48:34,388 | INFO     | overall cleanup function is called
[2026-02-04 15:49:35] 2026-02-04 20:48:35,396 | INFO     | --- collectZombieJob: --- 10, [3794952]
[2026-02-04 15:49:35] 2026-02-04 20:48:35,397 | INFO     | zombie collector waiting for pid 3794952
[2026-02-04 15:49:35] 2026-02-04 20:48:35,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 15:49:35] 2026-02-04 20:48:35,397 | INFO     | collected zombie processes
[2026-02-04 15:49:35] 2026-02-04 20:48:35,397 | INFO     | will attempt to kill all subprocesses of pid=3794952
[2026-02-04 15:49:35] 2026-02-04 20:48:35,909 | INFO     | process IDs to be killed: [3794952] (in reverse order)
[2026-02-04 15:49:35] 2026-02-04 20:48:36,059 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 15:49:35] 2026-02-04 20:48:36,059 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 15:49:35] 2026-02-04 20:48:36,081 | INFO     | did not find any defunct processes belonging to 3794952
[2026-02-04 15:49:35] 2026-02-04 20:48:36,102 | INFO     | did not find any defunct processes belonging to 3794952
[2026-02-04 15:49:35] 2026-02-04 20:48:36,103 | INFO     | ready for new job
[2026-02-04 15:49:35] 2026-02-04 20:48:36,103 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 15:49:35] 2026-02-04 20:48:36,104 | INFO     | **************************************
[2026-02-04 15:49:35] 2026-02-04 20:48:36,107 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 15:49:35] 2026-02-04 20:48:36,107 | INFO     | **************************************
[2026-02-04 15:49:35] 2026-02-04 20:48:36,107 | INFO     | 
[2026-02-04 15:49:35] 2026-02-04 20:48:36,111 | INFO     | architecture information:
[2026-02-04 15:49:35] 2026-02-04 20:48:36,112 | INFO     | executing command: cat /etc/os-release
[2026-02-04 15:49:35] 2026-02-04 20:48:36,124 | INFO     | cat /etc/os-release:
[2026-02-04 15:49:35] NAME="CentOS Linux"
[2026-02-04 15:49:35] VERSION="7 (Core)"
[2026-02-04 15:49:35] ID="centos"
[2026-02-04 15:49:35] ID_LIKE="rhel fedora"
[2026-02-04 15:49:35] VERSION_ID="7"
[2026-02-04 15:49:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 15:49:35] ANSI_COLOR="0;31"
[2026-02-04 15:49:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 15:49:35] HOME_URL="https://www.centos.org/"
[2026-02-04 15:49:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 15:49:35] 
[2026-02-04 15:49:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 15:49:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 15:49:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 15:49:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 15:49:35] 
[2026-02-04 15:49:35] 2026-02-04 20:48:36,124 | INFO     | **************************************
[2026-02-04 15:49:35] 2026-02-04 20:48:36,626 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-04 15:49:35] 2026-02-04 20:48:36,641 | INFO     | sufficient remaining disk space (129243283456 B)
[2026-02-04 15:49:35] 2026-02-04 20:48:36,641 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 15:49:35] 2026-02-04 20:48:36,641 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 15:49:35] 2026-02-04 20:48:36,641 | INFO     | update_server=False
[2026-02-04 15:49:35] 2026-02-04 20:48:36,641 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 15:49:35] 2026-02-04 20:48:36,767 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 15:49:35] 2026-02-04 20:48:36,767 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 15:49:35] 2026-02-04 20:48:36,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:49:35] 2026-02-04 20:48:36,767 | INFO     | will abort loop
[2026-02-04 15:49:35] 2026-02-04 20:48:36,896 | INFO     | all payload control threads have been joined
[2026-02-04 15:49:35] 2026-02-04 20:48:36,903 | INFO     | all job control threads have been joined
[2026-02-04 15:49:35] 2026-02-04 20:48:37,613 | INFO     | all data control threads have been joined
[2026-02-04 15:49:35] 2026-02-04 20:48:37,646 | INFO     | [job] retrieve thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:37,773 | INFO     | [job] job monitor thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:37,833 | INFO     | [payload] failed_post thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:37,860 | INFO     | [job] validate thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:37,902 | INFO     | [payload] control thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:37,909 | INFO     | [job] control thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:37,978 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 15:49:35] 2026-02-04 20:48:38,061 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:38,143 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:38,172 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:38,312 | INFO     | [data] copytool_in thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:38,583 | INFO     | [payload] validate_post thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:38,618 | INFO     | [data] control thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:39,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:49:35] 2026-02-04 20:48:39,485 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 15:49:35] 2026-02-04 20:48:39,984 | INFO     | [data] copytool_out thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:40,372 | INFO     | [job] queue monitor thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:43,492 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:48:47,188 | INFO     | job.realtimelogging is not enabled
[2026-02-04 15:49:35] 2026-02-04 20:48:48,193 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 15:49:35] 2026-02-04 20:49:07,158 | INFO     | PID=3788246 has CPU usage=8.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 15:49:35] 2026-02-04 20:49:07,158 | INFO     | .. there are 40 such processes running
[2026-02-04 15:49:35] 2026-02-04 20:49:07,159 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 15:49:35] 2026-02-04 20:49:07,159 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 15:49:35] 2026-02-04 20:49:07,159 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 15:49:35] 2026-02-04 20:49:28,864 | INFO     | [monitor] cgroup control has ended
[2026-02-04 15:49:35] 2026-02-04 20:49:30,565 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825814980416)>', '<ExcThread(monitor, started 139825327888128)>']
[2026-02-04 15:49:35] 2026-02-04 20:49:31,279 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 15:49:35] 2026-02-04 20:49:31,279 | INFO     | [monitor] control thread has ended
[2026-02-04 15:49:35] 2026-02-04 20:49:35,591 | INFO     | all workflow threads have been joined
[2026-02-04 15:49:35] 2026-02-04 20:49:35,591 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 15:49:35] 2026-02-04 20:49:35,592 | INFO     | traces error code: 0
[2026-02-04 15:49:35] 2026-02-04 20:49:35,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 15:49:35] 2026-02-04 20:49:35,704 [wrapper] ==== pilot stdout END ====
[2026-02-04 15:49:35] 2026-02-04 20:49:35,706 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 15:49:35] 2026-02-04 20:49:35,708 [wrapper] pilotpid: 3788246
[2026-02-04 15:49:35] 2026-02-04 20:49:35,710 [wrapper] Pilot exit status: 0
[2026-02-04 15:49:35] 2026-02-04 20:49:35,718 [wrapper] pandaids: 6994615759
[2026-02-04 15:49:35] 2026-02-04 20:49:35,820 [wrapper] cleanup supervisor_pilot  187732 3788247
[2026-02-04 15:49:35] 2026-02-04 20:49:35,822 [wrapper] Test setup, not cleaning
[2026-02-04 15:49:35] 2026-02-04 20:49:35,824 [wrapper] apfmon messages muted
[2026-02-04 15:49:35] 2026-02-04 20:49:35,827 [wrapper] ==== wrapper stdout END ====
[2026-02-04 15:49:35] 2026-02-04 20:49:35,829 [wrapper] ==== wrapper stderr END ====
[2026-02-04 15:49:35]  *** Error codes and diagnostics ***
[2026-02-04 15:49:35]     "exeErrorCode": 0,
[2026-02-04 15:49:35]     "exeErrorDiag": "",
[2026-02-04 15:49:35]     "pilotErrorCode": 0,
[2026-02-04 15:49:35]     "pilotErrorDiag": "",
[2026-02-04 15:49:35]  *** Listing of results directory ***
[2026-02-04 15:49:35] total 676000
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas    584422 Feb  3 18:41 pilot3.tar.gz
[2026-02-04 15:49:35] -rwx------. 1 boincer umatlas     36322 Feb  3 18:43 runpilot2-wrapper.sh
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 18:44 queuedata.json
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas       100 Feb  4 14:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 15:49:35] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  4 14:31 run_atlas
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas       105 Feb  4 14:31 job.xml
[2026-02-04 15:49:35] -rw-r--r--. 2 boincer umatlas 504719457 Feb  4 14:31 EVNT.48318016._000032.pool.root.1
[2026-02-04 15:49:35] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 14:31 start_atlas.sh
[2026-02-04 15:49:35] drwxrwx--x. 2 boincer umatlas      4096 Feb  4 14:31 shared
[2026-02-04 15:49:35] -rw-r--r--. 2 boincer umatlas    597759 Feb  4 14:31 input.tar.gz
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas         0 Feb  4 14:31 boinc_lockfile
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas      2520 Feb  4 14:31 pandaJob.out
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas        57 Feb  4 14:31 setup.sh.local
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas   1009544 Feb  4 14:31 agis_schedconf.cvmfs.json
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas   1511668 Feb  4 14:31 agis_ddmendpoints.agis.ALL.json
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas       429 Feb  4 14:31 workernode_map.json
[2026-02-04 15:49:35] drwx------. 5 boincer umatlas      4096 Feb  4 14:31 pilot3
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas      6946 Feb  4 15:46 init_data.xml
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas 181482541 Feb  4 15:48 HITS.48318018._001618.pool.root.1
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas       530 Feb  4 15:48 boinc_task_state.xml
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas        95 Feb  4 15:48 pilot_heartbeat.json
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas      1043 Feb  4 15:48 memory_monitor_summary.json
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas    356980 Feb  4 15:48 log.48318018._001618.job.log.tgz.1
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas      6346 Feb  4 15:48 heartbeat.json
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas        27 Feb  4 15:49 wrapper_checkpoint.txt
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 15:49 boinc_mmap_file
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas      5079 Feb  4 15:49 pilotlog.txt
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas    676150 Feb  4 15:49 log.48318018._001618.job.log.1
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas       357 Feb  4 15:49 output.list
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas       620 Feb  4 15:49 runtime_log
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas   1054720 Feb  4 15:49 result.tar.gz
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas      9336 Feb  4 15:49 runtime_log.err
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas       653 Feb  4 15:49 8dkMDm4Df78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmlBWKDm1xGYMo.diag
[2026-02-04 15:49:35] -rw-r--r--. 1 boincer umatlas     21352 Feb  4 15:49 stderr.txt
[2026-02-04 15:49:35] HITS file was successfully produced:
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas 181482541 Feb  4 15:48 shared/HITS.pool.root.1
[2026-02-04 15:49:35]  *** Contents of shared directory: ***
[2026-02-04 15:49:35] total 671764
[2026-02-04 15:49:35] -rw-r--r--. 2 boincer umatlas 504719457 Feb  4 14:31 ATLAS.root_0
[2026-02-04 15:49:35] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 14:31 start_atlas.sh
[2026-02-04 15:49:35] -rw-r--r--. 2 boincer umatlas    597759 Feb  4 14:31 input.tar.gz
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas 181482541 Feb  4 15:48 HITS.pool.root.1
[2026-02-04 15:49:35] -rw-------. 1 boincer umatlas   1054720 Feb  4 15:49 result.tar.gz
15:49:37 (3784106): run_atlas exited; CPU time 31431.809653
15:49:37 (3784106): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN