Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:13:21 (2035392): wrapper (7.7.26015): starting
05:13:21 (2035392): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 05:13:21] Arguments: --nthreads 8
[2026-02-04 05:13:21] Threads: 8
[2026-02-04 05:13:21] Checking for CVMFS
[2026-02-04 05:13:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 05:13:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 05:13:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 05:13:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 05:13:24] 2.13.3.0 5210 91376 434148 155863 3 53 16996758 32935937 16107 16776704 0 220355155 99.452 315766546 32460 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-04 05:13:24] CVMFS is ok
[2026-02-04 05:13:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 05:13:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 05:13:24] Further information can be found at the LHC@home message board.
[2026-02-04 05:13:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 05:13:24] Checking for apptainer binary...
[2026-02-04 05:13:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 05:13:24] Running /usr/bin/apptainer --version
[2026-02-04 05:13:24] apptainer version 1.4.5-2.el9
[2026-02-04 05:13:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 05:13:24] c6-1-26-2.aglt2.org
[2026-02-04 05:13:24] apptainer works
[2026-02-04 05:13:24] Set ATHENA_PROC_NUMBER=8
[2026-02-04 05:13:24] Set ATHENA_CORE_NUMBER=8
[2026-02-04 05:13:25] Starting ATLAS job with PandaID=6993747136
[2026-02-04 05:13:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 07:20:23]  *** The last 200 lines of the pilot log: ***
[2026-02-04 07:20:23] 2026-02-04 12:19:50,719 | INFO     | mean y: 2152206.837398374
[2026-02-04 07:20:23] 2026-02-04 12:19:50,719 | INFO     | intersect: -15354801150.442657
[2026-02-04 07:20:23] 2026-02-04 12:19:50,719 | INFO     | chi2: 2.5510495185779742
[2026-02-04 07:20:23] 2026-02-04 12:19:50,719 | INFO     | sum of square deviations: 509429577.42372864
[2026-02-04 07:20:23] 2026-02-04 12:19:50,720 | INFO     | sum of deviations: 12052868155.559324
[2026-02-04 07:20:23] 2026-02-04 12:19:50,720 | INFO     | mean x: 1770203703.5254238
[2026-02-04 07:20:23] 2026-02-04 12:19:50,720 | INFO     | mean y: 2167623.813559322
[2026-02-04 07:20:23] 2026-02-04 12:19:50,720 | INFO     | intersect: -41880033160.39429
[2026-02-04 07:20:23] 2026-02-04 12:19:50,720 | INFO     | chi2: 1.902946009445715
[2026-02-04 07:20:23] 2026-02-04 12:19:50,720 | INFO     | current chi2=1.902946009445715 (change=25.40536765015562 %)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,721 | INFO     | sum of square deviations: 447373514.92035353
[2026-02-04 07:20:23] 2026-02-04 12:19:50,721 | INFO     | sum of deviations: 12129131565.610624
[2026-02-04 07:20:23] 2026-02-04 12:19:50,721 | INFO     | mean x: 1770203551.0265486
[2026-02-04 07:20:23] 2026-02-04 12:19:50,721 | INFO     | mean y: 2167789.796460177
[2026-02-04 07:20:23] 2026-02-04 12:19:50,721 | INFO     | intersect: -47991356753.413574
[2026-02-04 07:20:23] 2026-02-04 12:19:50,722 | INFO     | chi2: 1.9024186069073834
[2026-02-04 07:20:23] 2026-02-04 12:19:50,722 | INFO     | current chi2=1.9024186069073834 (change=0.02771505527290924 %)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,722 | INFO     | right removable region: 112
[2026-02-04 07:20:23] 2026-02-04 12:19:50,722 | INFO     | sum of square deviations: 509434397.3644068
[2026-02-04 07:20:23] 2026-02-04 12:19:50,723 | INFO     | sum of deviations: -15323485629.76271
[2026-02-04 07:20:23] 2026-02-04 12:19:50,723 | INFO     | mean x: 1770204008.5338984
[2026-02-04 07:20:23] 2026-02-04 12:19:50,723 | INFO     | mean y: 2197581.440677966
[2026-02-04 07:20:23] 2026-02-04 12:19:50,723 | INFO     | intersect: 53248888081.44255
[2026-02-04 07:20:23] 2026-02-04 12:19:50,724 | INFO     | chi2: 0.7687461292322381
[2026-02-04 07:20:23] 2026-02-04 12:19:50,724 | INFO     | current chi2=0.7687461292322381 (change=69.86549560744088 %)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,724 | INFO     | sum of square deviations: 447376199.85840666
[2026-02-04 07:20:23] 2026-02-04 12:19:50,725 | INFO     | sum of deviations: -15742640751.646019
[2026-02-04 07:20:23] 2026-02-04 12:19:50,725 | INFO     | mean x: 1770204161.0353982
[2026-02-04 07:20:23] 2026-02-04 12:19:50,725 | INFO     | mean y: 2198487.9115044246
[2026-02-04 07:20:23] 2026-02-04 12:19:50,725 | INFO     | intersect: 62293594796.13992
[2026-02-04 07:20:23] 2026-02-04 12:19:50,725 | INFO     | chi2: 0.7345882038939411
[2026-02-04 07:20:23] 2026-02-04 12:19:50,725 | INFO     | current chi2=0.7345882038939411 (change=4.4433297338890245 %)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,725 | INFO     | left removable region: 20
[2026-02-04 07:20:23] 2026-02-04 12:19:50,726 | INFO     | sum of square deviations: 241416408.9021737
[2026-02-04 07:20:23] 2026-02-04 12:19:50,726 | INFO     | sum of deviations: -4322802787.282613
[2026-02-04 07:20:23] 2026-02-04 12:19:50,726 | INFO     | mean x: 1770204130.5326087
[2026-02-04 07:20:23] 2026-02-04 12:19:50,726 | INFO     | mean y: 2209876.7608695654
[2026-02-04 07:20:23] 2026-02-04 12:19:50,727 | INFO     | intersect: 31699489213.83519
[2026-02-04 07:20:23] 2026-02-04 12:19:50,727 | INFO     | chi2: 0.050397071070731624
[2026-02-04 07:20:23] 2026-02-04 12:19:50,727 | INFO     | current memory leak: -17.91 B/s (using 92 data points, chi2=0.05)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,727 | INFO     | could have reported an average CPU frequency of 2955 MHz (8 samples)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | ..............................
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | . Timing measurements:
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | . get job = 0 s
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | . initial setup = 27 s
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | . payload setup = 25 s
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | . stage-in = 0 s
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | . payload execution = 7470 s
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | . stage-out = 0 s
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | . log creation = 0 s
[2026-02-04 07:20:23] 2026-02-04 12:19:50,728 | INFO     | ..............................
[2026-02-04 07:20:23] 2026-02-04 12:19:50,863 | INFO     | 
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | job summary report
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | --------------------------------------------------
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | PanDA job id: 6993747136
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | task id: 48318034
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | errors: (none)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | pilot state: finished 
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | transexitcode: 0
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | exeerrorcode: 0
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | exeerrordiag: 
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | exitcode: 0
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | exitmsg: OK
[2026-02-04 07:20:23] 2026-02-04 12:19:50,864 | INFO     | cpuconsumptiontime: 39764 s
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | nevents: 400
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | neventsw: 0
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | pid: 2046255
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | pgrp: 2046255
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | corecount: 8
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | event service: False
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | sizes: {0: 2277803, 1: 2277803, 2: 2278292, 7499: 2305613, 7500: 2305612, 7501: 2314850, 7502: 2314988}
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | --------------------------------------------------
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | 
[2026-02-04 07:20:23] 2026-02-04 12:19:50,865 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-04 07:20:23] 2026-02-04 12:19:50,927 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,927 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,927 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,928 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 07:20:23] 2026-02-04 12:19:50,929 | INFO     | job 6993747136 has completed (purged errors)
[2026-02-04 07:20:23] 2026-02-04 12:19:50,930 | INFO     | overall cleanup function is called
[2026-02-04 07:20:23] 2026-02-04 12:19:51,940 | INFO     | --- collectZombieJob: --- 10, [2046255]
[2026-02-04 07:20:23] 2026-02-04 12:19:51,941 | INFO     | zombie collector waiting for pid 2046255
[2026-02-04 07:20:23] 2026-02-04 12:19:51,941 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 07:20:23] 2026-02-04 12:19:51,941 | INFO     | collected zombie processes
[2026-02-04 07:20:23] 2026-02-04 12:19:51,941 | INFO     | will attempt to kill all subprocesses of pid=2046255
[2026-02-04 07:20:23] 2026-02-04 12:19:52,350 | INFO     | process IDs to be killed: [2046255] (in reverse order)
[2026-02-04 07:20:23] 2026-02-04 12:19:52,553 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 07:20:23] 2026-02-04 12:19:52,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 07:20:23] 2026-02-04 12:19:52,582 | INFO     | did not find any defunct processes belonging to 2046255
[2026-02-04 07:20:23] 2026-02-04 12:19:52,595 | INFO     | did not find any defunct processes belonging to 2046255
[2026-02-04 07:20:23] 2026-02-04 12:19:52,595 | INFO     | ready for new job
[2026-02-04 07:20:23] 2026-02-04 12:19:52,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 07:20:23] 2026-02-04 12:19:52,597 | INFO     | **************************************
[2026-02-04 07:20:23] 2026-02-04 12:19:52,597 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 07:20:23] 2026-02-04 12:19:52,597 | INFO     | **************************************
[2026-02-04 07:20:23] 2026-02-04 12:19:52,597 | INFO     | 
[2026-02-04 07:20:23] 2026-02-04 12:19:52,614 | INFO     | architecture information:
[2026-02-04 07:20:23] 2026-02-04 12:19:52,623 | INFO     | executing command: cat /etc/os-release
[2026-02-04 07:20:23] 2026-02-04 12:19:52,652 | INFO     | cat /etc/os-release:
[2026-02-04 07:20:23] NAME="CentOS Linux"
[2026-02-04 07:20:23] VERSION="7 (Core)"
[2026-02-04 07:20:23] ID="centos"
[2026-02-04 07:20:23] ID_LIKE="rhel fedora"
[2026-02-04 07:20:23] VERSION_ID="7"
[2026-02-04 07:20:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 07:20:23] ANSI_COLOR="0;31"
[2026-02-04 07:20:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 07:20:23] HOME_URL="https://www.centos.org/"
[2026-02-04 07:20:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 07:20:23] 
[2026-02-04 07:20:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 07:20:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 07:20:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 07:20:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 07:20:23] 
[2026-02-04 07:20:23] 2026-02-04 12:19:52,653 | INFO     | **************************************
[2026-02-04 07:20:23] 2026-02-04 12:19:53,050 | WARNING  | process 2046255 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 07:20:23] 2026-02-04 12:19:53,156 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-04 07:20:23] 2026-02-04 12:19:53,217 | INFO     | sufficient remaining disk space (75954651136 B)
[2026-02-04 07:20:23] 2026-02-04 12:19:53,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 07:20:23] 2026-02-04 12:19:53,217 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 07:20:23] 2026-02-04 12:19:53,218 | INFO     | update_server=False
[2026-02-04 07:20:23] 2026-02-04 12:19:53,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 07:20:23] 2026-02-04 12:19:53,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 07:20:23] 2026-02-04 12:19:53,365 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 07:20:23] 2026-02-04 12:19:53,366 | INFO     | using path: /tmp/boinchome/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 07:20:23] 2026-02-04 12:19:53,366 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-02-04 07:20:23] 2026-02-04 12:19:53,367 | WARNING  | maxPSS not found in memory monitor output
[2026-02-04 07:20:23] 2026-02-04 12:19:53,367 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/1/PanDA_Pilot-6993747136/payload.stdout) since it has not been created yet
[2026-02-04 07:20:23] 2026-02-04 12:19:53,367 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-04 07:20:23] 2026-02-04 12:19:53,409 | INFO     | sufficient remaining disk space (75954651136 B)
[2026-02-04 07:20:23] 2026-02-04 12:19:53,410 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-02-04 07:20:23] 2026-02-04 12:19:53,410 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/1/PanDA_Pilot-6993747136/HITS.48318034._007159.pool.root.1 since it does not exist
[2026-02-04 07:20:23] 2026-02-04 12:19:53,730 | INFO     | all data control threads have been joined
[2026-02-04 07:20:23] 2026-02-04 12:19:53,855 | INFO     | all job control threads have been joined
[2026-02-04 07:20:23] 2026-02-04 12:19:53,897 | INFO     | number of running child processes to parent process 2046255: 1
[2026-02-04 07:20:23] 2026-02-04 12:19:53,898 | INFO     | maximum number of monitored processes: 6
[2026-02-04 07:20:23] 2026-02-04 12:19:53,898 | INFO     | aborting job monitoring since job object (job id=6993747136) has expired
[2026-02-04 07:20:23] 2026-02-04 12:19:53,898 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:20:23] 2026-02-04 12:19:53,898 | INFO     | will abort loop
[2026-02-04 07:20:23] 2026-02-04 12:19:54,224 | INFO     | [job] retrieve thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:54,264 | INFO     | [data] copytool_in thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:54,286 | INFO     | [job] validate thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:54,487 | INFO     | [payload] validate_post thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:54,612 | INFO     | job.realtimelogging is not enabled
[2026-02-04 07:20:23] 2026-02-04 12:19:54,640 | INFO     | all payload control threads have been joined
[2026-02-04 07:20:23] 2026-02-04 12:19:54,674 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:54,737 | INFO     | [data] control thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:54,829 | INFO     | [payload] failed_post thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:54,862 | INFO     | [job] control thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:54,905 | INFO     | [job] job monitor thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:55,054 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:55,299 | INFO     | [data] copytool_out thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:55,431 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:55,618 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:55,645 | INFO     | [payload] control thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:55,877 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:20:23] 2026-02-04 12:19:56,368 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 07:20:23] 2026-02-04 12:19:56,884 | INFO     | [job] queue monitor thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:19:59,480 | INFO     | [monitor] cgroup control has ended
[2026-02-04 07:20:23] 2026-02-04 12:20:00,377 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 07:20:23] 2026-02-04 12:20:01,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054061717312)>', '<ExcThread(monitor, started 140053573527296)>']
[2026-02-04 07:20:23] 2026-02-04 12:20:06,222 | INFO     | all workflow threads have been joined
[2026-02-04 07:20:23] 2026-02-04 12:20:06,223 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 07:20:23] 2026-02-04 12:20:06,223 | INFO     | traces error code: 0
[2026-02-04 07:20:23] 2026-02-04 12:20:06,223 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 07:20:23] 2026-02-04 12:20:23,045 | INFO     | PID=2040047 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 07:20:23] 2026-02-04 12:20:23,045 | INFO     | .. there are 22 such processes running
[2026-02-04 07:20:23] 2026-02-04 12:20:23,046 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 07:20:23] 2026-02-04 12:20:23,046 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 07:20:23] 2026-02-04 12:20:23,046 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 07:20:23] 2026-02-04 12:20:23,046 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 07:20:23] 2026-02-04 12:20:23,046 | INFO     | [monitor] control thread has ended
[2026-02-04 07:20:23] 2026-02-04 12:20:23,307 [wrapper] ==== pilot stdout END ====
[2026-02-04 07:20:23] 2026-02-04 12:20:23,350 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 07:20:23] 2026-02-04 12:20:23,363 [wrapper] pilotpid: 2040047
[2026-02-04 07:20:23] 2026-02-04 12:20:23,375 [wrapper] Pilot exit status: 0
[2026-02-04 07:20:23] 2026-02-04 12:20:23,402 [wrapper] pandaids: 6993747136
[2026-02-04 07:20:23] 2026-02-04 12:20:23,474 [wrapper] cleanup supervisor_pilot 2533391 2040048
[2026-02-04 07:20:23] 2026-02-04 12:20:23,477 [wrapper] Test setup, not cleaning
[2026-02-04 07:20:23] 2026-02-04 12:20:23,479 [wrapper] apfmon messages muted
[2026-02-04 07:20:23] 2026-02-04 12:20:23,481 [wrapper] ==== wrapper stdout END ====
[2026-02-04 07:20:23] 2026-02-04 12:20:23,483 [wrapper] ==== wrapper stderr END ====
[2026-02-04 07:20:23]  *** Error codes and diagnostics ***
[2026-02-04 07:20:23]     "exeErrorCode": 0,
[2026-02-04 07:20:23]     "exeErrorDiag": "",
[2026-02-04 07:20:23]     "pilotErrorCode": 0,
[2026-02-04 07:20:23]     "pilotErrorDiag": "",
[2026-02-04 07:20:23]  *** Listing of results directory ***
[2026-02-04 07:20:23] total 668272
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas    584422 Feb  2 23:59 pilot3.tar.gz
[2026-02-04 07:20:23] -rwx------. 1 boincer umatlas     36322 Feb  3 00:01 runpilot2-wrapper.sh
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 00:02 queuedata.json
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas       100 Feb  4 05:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 07:20:23] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  4 05:13 run_atlas
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas       105 Feb  4 05:13 job.xml
[2026-02-04 07:20:23] -rw-r--r--. 2 boincer umatlas 493712179 Feb  4 05:13 EVNT.48318032._000152.pool.root.1
[2026-02-04 07:20:23] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 05:13 start_atlas.sh
[2026-02-04 07:20:23] drwxrwx--x. 2 boincer umatlas      4096 Feb  4 05:13 shared
[2026-02-04 07:20:23] -rw-r--r--. 2 boincer umatlas    597766 Feb  4 05:13 input.tar.gz
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas         0 Feb  4 05:13 boinc_lockfile
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas      2536 Feb  4 05:13 pandaJob.out
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas        57 Feb  4 05:13 setup.sh.local
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas   1009236 Feb  4 05:14 agis_schedconf.cvmfs.json
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas   1511668 Feb  4 05:14 agis_ddmendpoints.agis.ALL.json
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas       442 Feb  4 05:14 workernode_map.json
[2026-02-04 07:20:23] drwx------. 5 boincer umatlas      4096 Feb  4 05:14 pilot3
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas      6843 Feb  4 07:11 init_data.xml
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas 183763842 Feb  4 07:19 HITS.48318034._007159.pool.root.1
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas       531 Feb  4 07:19 boinc_task_state.xml
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas      1042 Feb  4 07:19 memory_monitor_summary.json
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas        95 Feb  4 07:19 pilot_heartbeat.json
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas    391174 Feb  4 07:19 log.48318034._007159.job.log.tgz.1
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas      6395 Feb  4 07:19 heartbeat.json
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas        27 Feb  4 07:20 wrapper_checkpoint.txt
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 07:20 boinc_mmap_file
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas       823 Feb  4 07:20 pilotlog.txt
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas   1051253 Feb  4 07:20 log.48318034._007159.job.log.1
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas       357 Feb  4 07:20 output.list
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas       620 Feb  4 07:20 runtime_log
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas   1464320 Feb  4 07:20 result.tar.gz
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas      9346 Feb  4 07:20 runtime_log.err
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas       654 Feb  4 07:20 JPoNDmRiN78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmmIUKDmfnkoZm.diag
[2026-02-04 07:20:23] -rw-r--r--. 1 boincer umatlas     21519 Feb  4 07:20 stderr.txt
[2026-02-04 07:20:23] HITS file was successfully produced:
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas 183763842 Feb  4 07:19 shared/HITS.pool.root.1
[2026-02-04 07:20:23]  *** Contents of shared directory: ***
[2026-02-04 07:20:23] total 663644
[2026-02-04 07:20:23] -rw-r--r--. 2 boincer umatlas 493712179 Feb  4 05:13 ATLAS.root_0
[2026-02-04 07:20:23] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 05:13 start_atlas.sh
[2026-02-04 07:20:23] -rw-r--r--. 2 boincer umatlas    597766 Feb  4 05:13 input.tar.gz
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas 183763842 Feb  4 07:19 HITS.pool.root.1
[2026-02-04 07:20:23] -rw-------. 1 boincer umatlas   1464320 Feb  4 07:20 result.tar.gz
07:20:24 (2035392): run_atlas exited; CPU time 39934.503617
07:20:24 (2035392): called boinc_finish(0)

</stderr_txt>
]]>

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