Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
09:07:03 (2335570): wrapper (7.7.26015): starting
09:07:03 (2335570): wrapper: running run_atlas (--nthreads 12)
[2026-02-04 09:07:03] Arguments: --nthreads 12
[2026-02-04 09:07:03] Threads: 12
[2026-02-04 09:07:03] Checking for CVMFS
[2026-02-04 09:07:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 09:07:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 09:07:03] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 09:07:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 09:07:03] 2.11.0.0 921820 7916 93120 155861 1 188 4856605 6144001 8410 130560 0 76988358 99.999 298567 165 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-04 09:07:03] CVMFS is ok
[2026-02-04 09:07:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 09:07:03] Checking for apptainer binary...
[2026-02-04 09:07:03] apptainer is not installed, using version from CVMFS
[2026-02-04 09:07:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 09:07:04] radiat0r
[2026-02-04 09:07:04] apptainer works
[2026-02-04 09:07:04] Set ATHENA_PROC_NUMBER=12
[2026-02-04 09:07:04] Set ATHENA_CORE_NUMBER=12
[2026-02-04 09:07:04] Starting ATLAS job with PandaID=6983774050
[2026-02-04 09:07:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/29 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 09:45:30]  *** The last 200 lines of the pilot log: ***
[2026-02-04 09:45:30]  filesize=347743
[2026-02-04 09:45:30]  filetype=log
[2026-02-04 09:45:30]  guid=9f21d060-c893-4138-a7e2-60eb1cd0cee3
[2026-02-04 09:45:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-04 09:45:30]  is_altstaged=None
[2026-02-04 09:45:30]  is_tar=False
[2026-02-04 09:45:30]  lfn=log.48318042._002377.job.log.tgz.1
[2026-02-04 09:45:30]  mtime=0
[2026-02-04 09:45:30]  protocol_id=None
[2026-02-04 09:45:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 09:45:30]  replicas=None
[2026-02-04 09:45:30]  scope=mc23_13p6TeV
[2026-02-04 09:45:30]  status=None
[2026-02-04 09:45:30]  status_code=0
[2026-02-04 09:45:30]  storage_token=
[2026-02-04 09:45:30]  surl=/var/lib/boinc/slots/29/PanDA_Pilot-6983774050/log.48318042._002377.job.log.tgz.1
[2026-02-04 09:45:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/1c/log.48318042._002377.job.log.tgz.1
[2026-02-04 09:45:30]  workdir=None
[2026-02-04 09:45:30] ]
[2026-02-04 09:45:30] 2026-02-04 09:44:21,197 | INFO     | transferring file log.48318042._002377.job.log.tgz.1 from /var/lib/boinc/slots/29/PanDA_Pilot-6983774050/log.48318042._002377.job.log.tgz.1 to /var/lib/boinc/slots
[2026-02-04 09:45:30] 2026-02-04 09:44:21,197 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/29/PanDA_Pilot-6983774050/log.48318042._002377.job.log.tgz.1 /var/lib/boinc/slots/29/log.48318042._002377.j
[2026-02-04 09:45:30] 2026-02-04 09:44:21,220 | INFO     | adding to output.list: log.48318042._002377.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/53/1c/log.48318042._002377.job.log.tg
[2026-02-04 09:45:30] 2026-02-04 09:44:21,220 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 09:45:30] 2026-02-04 09:44:21,220 | INFO     | summary of transferred files:
[2026-02-04 09:45:30] 2026-02-04 09:44:21,220 | INFO     |  -- lfn=log.48318042._002377.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 09:45:30] 2026-02-04 09:44:21,220 | INFO     | stage-out finished correctly
[2026-02-04 09:45:30] 2026-02-04 09:44:21,660 | INFO     | time since job start (2220s) is within the limit (349056.0s)
[2026-02-04 09:45:30] 2026-02-04 09:44:22,706 | INFO     | monitor loop #165: job 0:6983774050 is in state 'finished'
[2026-02-04 09:45:30] 2026-02-04 09:44:22,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 09:45:30] 2026-02-04 09:44:23,666 | INFO     | time since job start (2222s) is within the limit (349056.0s)
[2026-02-04 09:45:30] 2026-02-04 09:44:23,965 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 09:45:30] 2026-02-04 09:44:24,026 | INFO     | job 6983774050 has state=finished
[2026-02-04 09:45:30] 2026-02-04 09:44:24,027 | INFO     | preparing for final server update for job 6983774050 in state='finished'
[2026-02-04 09:45:30] 2026-02-04 09:44:24,027 | INFO     | reading metadata from: /var/lib/boinc/slots/29/PanDA_Pilot-6983774050/jobReport.json
[2026-02-04 09:45:30] 2026-02-04 09:44:24,030 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/29/workernode_map.json
[2026-02-04 09:45:30] 2026-02-04 09:44:24,030 | INFO     | this job has now completed (state=finished)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,031 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,031 | INFO     | log transfer has been attempted: DONE
[2026-02-04 09:45:30] 2026-02-04 09:44:24,031 | INFO     | job 6983774050 has finished - writing final server update
[2026-02-04 09:45:30] 2026-02-04 09:44:24,031 | INFO     | total number of processed events: 400 (read)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,112 | INFO     | using path: /var/lib/boinc/slots/29/PanDA_Pilot-6983774050/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,112 | INFO     | extracted standard info from prmon json
[2026-02-04 09:45:30] 2026-02-04 09:44:24,112 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 09:45:30] 2026-02-04 09:44:24,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 09:45:30] 2026-02-04 09:44:24,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 09:45:30] 2026-02-04 09:44:24,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 09:45:30] 2026-02-04 09:44:24,114 | INFO     | fitting pss+swap vs Time
[2026-02-04 09:45:30] 2026-02-04 09:44:24,114 | INFO     | sum of square deviations: 7553630.0
[2026-02-04 09:45:30] 2026-02-04 09:44:24,114 | INFO     | sum of deviations: 90762510.0
[2026-02-04 09:45:30] 2026-02-04 09:44:24,114 | INFO     | mean x: 1770197225.0
[2026-02-04 09:45:30] 2026-02-04 09:44:24,114 | INFO     | mean y: 2673961.6551724137
[2026-02-04 09:45:30] 2026-02-04 09:44:24,114 | INFO     | intersect: -21267568734.377693
[2026-02-04 09:45:30] 2026-02-04 09:44:24,114 | INFO     | chi2: 0.0006395313154865155
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | current memory leak: 12.02 B/s (using 29 data points, chi2=0.00)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | could have reported an average CPU frequency of 2338 MHz (5 samples)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | ..............................
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | . Timing measurements:
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | . get job = 0 s
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | . initial setup = 7 s
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | . payload setup = 7 s
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | . stage-in = 0 s
[2026-02-04 09:45:30] 2026-02-04 09:44:24,115 | INFO     | . payload execution = 2196 s
[2026-02-04 09:45:30] 2026-02-04 09:44:24,116 | INFO     | . stage-out = 0 s
[2026-02-04 09:45:30] 2026-02-04 09:44:24,116 | INFO     | . log creation = 0 s
[2026-02-04 09:45:30] 2026-02-04 09:44:24,116 | INFO     | ..............................
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | 
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | job summary report
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | --------------------------------------------------
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | PanDA job id: 6983774050
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | task id: 48318042
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | errors: (none)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | pilot state: finished 
[2026-02-04 09:45:30] 2026-02-04 09:44:24,436 | INFO     | transexitcode: 0
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | exeerrorcode: 0
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | exeerrordiag: 
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | exitcode: 0
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | exitmsg: OK
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | cpuconsumptiontime: 23546 s
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | nevents: 400
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | neventsw: 0
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | pid: 2351988
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | pgrp: 2351988
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | corecount: 12
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | event service: False
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | sizes: {0: 2278019, 1: 2278281, 11: 2278309, 2207: 2303417, 2208: 2312417, 2211: 2312827}
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | --------------------------------------------------
[2026-02-04 09:45:30] 2026-02-04 09:44:24,437 | INFO     | 
[2026-02-04 09:45:30] 2026-02-04 09:44:24,438 | INFO     | executing command: ls -lF /var/lib/boinc/slots/29
[2026-02-04 09:45:30] 2026-02-04 09:44:24,472 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,472 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,472 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,472 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,473 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,474 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,474 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,474 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,474 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,474 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,474 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 09:45:30] 2026-02-04 09:44:24,474 | INFO     | job 6983774050 has completed (purged errors)
[2026-02-04 09:45:30] 2026-02-04 09:44:24,474 | INFO     | overall cleanup function is called
[2026-02-04 09:45:30] 2026-02-04 09:44:25,485 | INFO     | --- collectZombieJob: --- 10, [2351988]
[2026-02-04 09:45:30] 2026-02-04 09:44:25,485 | INFO     | zombie collector waiting for pid 2351988
[2026-02-04 09:45:30] 2026-02-04 09:44:25,485 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 09:45:30] 2026-02-04 09:44:25,485 | INFO     | collected zombie processes
[2026-02-04 09:45:30] 2026-02-04 09:44:25,485 | INFO     | will attempt to kill all subprocesses of pid=2351988
[2026-02-04 09:45:30] 2026-02-04 09:44:25,873 | INFO     | process IDs to be killed: [2351988] (in reverse order)
[2026-02-04 09:45:30] 2026-02-04 09:44:26,030 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 09:45:30] 2026-02-04 09:44:26,031 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 09:45:30] 2026-02-04 09:44:26,058 | INFO     | did not find any defunct processes belonging to 2351988
[2026-02-04 09:45:30] 2026-02-04 09:44:26,083 | INFO     | did not find any defunct processes belonging to 2351988
[2026-02-04 09:45:30] 2026-02-04 09:44:26,083 | INFO     | ready for new job
[2026-02-04 09:45:30] 2026-02-04 09:44:26,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 09:45:30] 2026-02-04 09:44:26,085 | INFO     | **************************************
[2026-02-04 09:45:30] 2026-02-04 09:44:26,086 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 09:45:30] 2026-02-04 09:44:26,086 | INFO     | **************************************
[2026-02-04 09:45:30] 2026-02-04 09:44:26,086 | INFO     | 
[2026-02-04 09:45:30] 2026-02-04 09:44:26,126 | INFO     | architecture information:
[2026-02-04 09:45:30] 2026-02-04 09:44:26,127 | INFO     | executing command: cat /etc/os-release
[2026-02-04 09:45:30] 2026-02-04 09:44:26,151 | INFO     | cat /etc/os-release:
[2026-02-04 09:45:30] NAME="CentOS Linux"
[2026-02-04 09:45:30] VERSION="7 (Core)"
[2026-02-04 09:45:30] ID="centos"
[2026-02-04 09:45:30] ID_LIKE="rhel fedora"
[2026-02-04 09:45:30] VERSION_ID="7"
[2026-02-04 09:45:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 09:45:30] ANSI_COLOR="0;31"
[2026-02-04 09:45:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 09:45:30] HOME_URL="https://www.centos.org/"
[2026-02-04 09:45:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 09:45:30] 
[2026-02-04 09:45:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 09:45:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 09:45:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 09:45:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 09:45:30] 
[2026-02-04 09:45:30] 2026-02-04 09:44:26,151 | INFO     | **************************************
[2026-02-04 09:45:30] 2026-02-04 09:44:26,655 | INFO     | executing command: df -mP /var/lib/boinc/slots/29
[2026-02-04 09:45:30] 2026-02-04 09:44:26,686 | INFO     | sufficient remaining disk space (1704914321408 B)
[2026-02-04 09:45:30] 2026-02-04 09:44:26,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 09:45:30] 2026-02-04 09:44:26,686 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 09:45:30] 2026-02-04 09:44:26,686 | INFO     | update_server=False
[2026-02-04 09:45:30] 2026-02-04 09:44:26,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 09:45:30] 2026-02-04 09:44:26,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 09:45:30] 2026-02-04 09:44:26,687 | INFO     | aborting loop
[2026-02-04 09:45:30] 2026-02-04 09:44:26,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 09:45:30] 2026-02-04 09:44:27,216 | INFO     | all payload control threads have been joined
[2026-02-04 09:45:30] 2026-02-04 09:44:27,303 | INFO     | all data control threads have been joined
[2026-02-04 09:45:30] 2026-02-04 09:44:27,698 | INFO     | [job] job monitor thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:27,696 | INFO     | [job] retrieve thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:27,895 | INFO     | [data] copytool_in thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:27,979 | INFO     | all job control threads have been joined
[2026-02-04 09:45:30] 2026-02-04 09:44:28,104 | INFO     | [payload] validate_post thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:28,214 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:28,222 | INFO     | [payload] control thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:28,305 | INFO     | [data] control thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:28,536 | INFO     | [job] validate thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:28,676 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:28,786 | INFO     | [data] copytool_out thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:28,870 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:28,985 | INFO     | [job] control thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:29,056 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:29,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 09:45:30] 2026-02-04 09:44:29,214 | INFO     | [payload] failed_post thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:30,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 09:45:30] 2026-02-04 09:44:30,193 | INFO     | [job] queue monitor thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:34,039 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 09:45:30] 2026-02-04 09:44:57,237 | INFO     | PID=2346331 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 09:45:30] 2026-02-04 09:44:57,237 | INFO     | .. there are 4 such processes running
[2026-02-04 09:45:30] 2026-02-04 09:44:57,238 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 09:45:30] 2026-02-04 09:44:57,238 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 09:45:30] 2026-02-04 09:44:57,238 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 09:45:30] 2026-02-04 09:45:24,722 | INFO     | [monitor] cgroup control has ended
[2026-02-04 09:45:30] 2026-02-04 09:45:24,981 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140065421162304)>', '<ExcThread(monitor, started 140064856209152)>']
[2026-02-04 09:45:30] 2026-02-04 09:45:25,376 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 09:45:30] 2026-02-04 09:45:25,377 | INFO     | [monitor] control thread has ended
[2026-02-04 09:45:30] 2026-02-04 09:45:30,007 | INFO     | all workflow threads have been joined
[2026-02-04 09:45:30] 2026-02-04 09:45:30,007 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 09:45:30] 2026-02-04 09:45:30,007 | INFO     | traces error code: 0
[2026-02-04 09:45:30] 2026-02-04 09:45:30,008 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 09:45:30] 2026-02-04 09:45:30,124 [wrapper] ==== pilot stdout END ====
[2026-02-04 09:45:30] 2026-02-04 09:45:30,128 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 09:45:30] 2026-02-04 09:45:30,133 [wrapper] pilotpid: 2346331
[2026-02-04 09:45:30] 2026-02-04 09:45:30,137 [wrapper] Pilot exit status: 0
[2026-02-04 09:45:30] 2026-02-04 09:45:30,151 [wrapper] pandaids: 6983774050
[2026-02-04 09:45:30] 2026-02-04 09:45:30,267 [wrapper] cleanup supervisor_pilot 2359372 2346332
[2026-02-04 09:45:30] 2026-02-04 09:45:30,270 [wrapper] Test setup, not cleaning
[2026-02-04 09:45:30] 2026-02-04 09:45:30,274 [wrapper] apfmon messages muted
[2026-02-04 09:45:30] 2026-02-04 09:45:30,278 [wrapper] ==== wrapper stdout END ====
[2026-02-04 09:45:30] 2026-02-04 09:45:30,282 [wrapper] ==== wrapper stderr END ====
[2026-02-04 09:45:30]  *** Error codes and diagnostics ***
[2026-02-04 09:45:30]     "exeErrorCode": 0,
[2026-02-04 09:45:30]     "exeErrorDiag": "",
[2026-02-04 09:45:30]     "pilotErrorCode": 0,
[2026-02-04 09:45:30]     "pilotErrorDiag": "",
[2026-02-04 09:45:30]  *** Listing of results directory ***
[2026-02-04 09:45:30] total 675164
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc    584422 Jan 26 05:14 pilot3.tar.gz
[2026-02-04 09:45:30] -rwx------ 1 boinc boinc     36322 Jan 26 05:15 runpilot2-wrapper.sh
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc      5111 Jan 26 05:16 queuedata.json
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc       100 Feb  4 09:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 09:45:30] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 09:07 run_atlas
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc       105 Feb  4 09:07 job.xml
[2026-02-04 09:45:30] -rw-r--r-- 2 boinc boinc 501229944 Feb  4 09:07 EVNT.48318040._000048.pool.root.1
[2026-02-04 09:45:30] -rw-r--r-- 2 boinc boinc     15845 Feb  4 09:07 start_atlas.sh
[2026-02-04 09:45:30] drwxrwx--x 2 boinc boinc      4096 Feb  4 09:07 shared
[2026-02-04 09:45:30] -rw-r--r-- 2 boinc boinc    597760 Feb  4 09:07 input.tar.gz
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc      9417 Feb  4 09:07 init_data.xml
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc         0 Feb  4 09:07 boinc_setup_complete
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc         0 Feb  4 09:07 boinc_lockfile
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc      2532 Feb  4 09:07 pandaJob.out
[2026-02-04 09:45:30] -rw------- 1 boinc boinc   1009244 Feb  4 09:07 agis_schedconf.cvmfs.json
[2026-02-04 09:45:30] -rw------- 1 boinc boinc   1511668 Feb  4 09:07 agis_ddmendpoints.agis.ALL.json
[2026-02-04 09:45:30] -rw------- 1 boinc boinc       421 Feb  4 09:07 workernode_map.json
[2026-02-04 09:45:30] drwx------ 5 boinc boinc      4096 Feb  4 09:07 pilot3
[2026-02-04 09:45:30] -rw------- 1 boinc boinc 184796867 Feb  4 09:43 HITS.48318042._002377.pool.root.1
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc       530 Feb  4 09:44 boinc_task_state.xml
[2026-02-04 09:45:30] -rw------- 1 boinc boinc      1025 Feb  4 09:44 memory_monitor_summary.json
[2026-02-04 09:45:30] -rw------- 1 boinc boinc    347743 Feb  4 09:44 log.48318042._002377.job.log.tgz.1
[2026-02-04 09:45:30] -rw------- 1 boinc boinc      6283 Feb  4 09:44 heartbeat.json
[2026-02-04 09:45:30] -rw------- 1 boinc boinc        95 Feb  4 09:44 pilot_heartbeat.json
[2026-02-04 09:45:30] -rw------- 1 boinc boinc      4822 Feb  4 09:45 pilotlog.txt
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc      8192 Feb  4 09:45 boinc_mmap_file
[2026-02-04 09:45:30] -rw------- 1 boinc boinc    348920 Feb  4 09:45 log.48318042._002377.job.log.1
[2026-02-04 09:45:30] -rw------- 1 boinc boinc       357 Feb  4 09:45 output.list
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc       620 Feb  4 09:45 runtime_log
[2026-02-04 09:45:30] -rw------- 1 boinc boinc    716800 Feb  4 09:45 result.tar.gz
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc        27 Feb  4 09:45 wrapper_checkpoint.txt
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc      8787 Feb  4 09:45 runtime_log.err
[2026-02-04 09:45:30] -rw------- 1 boinc boinc       642 Feb  4 09:45 mTsMDme7T48n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTb2KDmihNeNo.diag
[2026-02-04 09:45:30] -rw-r--r-- 1 boinc boinc     20919 Feb  4 09:45 stderr.txt
[2026-02-04 09:45:30] HITS file was successfully produced:
[2026-02-04 09:45:30] -rw------- 1 boinc boinc 184796867 Feb  4 09:43 shared/HITS.pool.root.1
[2026-02-04 09:45:30]  *** Contents of shared directory: ***
[2026-02-04 09:45:30] total 671260
[2026-02-04 09:45:30] -rw-r--r-- 2 boinc boinc 501229944 Feb  4 09:07 ATLAS.root_0
[2026-02-04 09:45:30] -rw-r--r-- 2 boinc boinc     15845 Feb  4 09:07 start_atlas.sh
[2026-02-04 09:45:30] -rw-r--r-- 2 boinc boinc    597760 Feb  4 09:07 input.tar.gz
[2026-02-04 09:45:30] -rw------- 1 boinc boinc 184796867 Feb  4 09:43 HITS.pool.root.1
[2026-02-04 09:45:30] -rw------- 1 boinc boinc    716800 Feb  4 09:45 result.tar.gz
09:45:32 (2335570): run_atlas exited; CPU time 23622.843827
09:45:32 (2335570): called boinc_finish(0)

</stderr_txt>
]]>

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