Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:50:02 (2430191): wrapper (7.7.26015): starting
06:50:02 (2430191): wrapper: running run_atlas (--nthreads 4)
[2026-02-08 06:50:02] Arguments: --nthreads 4
[2026-02-08 06:50:02] Threads: 4
[2026-02-08 06:50:02] Checking for CVMFS
[2026-02-08 06:50:02] No cvmfs_config command found, will try listing directly
[2026-02-08 06:50:02] CVMFS is ok
[2026-02-08 06:50:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-08 06:50:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-08 06:50:02] Further information can be found at the LHC@home message board.
[2026-02-08 06:50:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-08 06:50:02] Checking for apptainer binary...
[2026-02-08 06:50:02] which: no apptainer in ((null))
[2026-02-08 06:50:02] apptainer is not installed, using version from CVMFS
[2026-02-08 06:50:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-08 06:50:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2026-02-08 06:50:02] apptainer works
[2026-02-08 06:50:02] Set ATHENA_PROC_NUMBER=4
[2026-02-08 06:50:02] Set ATHENA_CORE_NUMBER=4
[2026-02-08 06:50:02] Starting ATLAS job with PandaID=7000583385
[2026-02-08 06:50:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-08 09:43:44]  *** The last 200 lines of the pilot log: ***
[2026-02-08 09:43:44] 2026-02-08 08:34:53,830 | INFO     | total number of processed events: 400 (read)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,855 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-7000583385/memory_monitor_summary.json (trf name=prmon)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,856 | INFO     | extracted standard info from prmon json
[2026-02-08 09:43:44] 2026-02-08 08:34:53,856 | INFO     | extracted standard memory fields from prmon json
[2026-02-08 09:43:44] 2026-02-08 08:34:53,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-08 09:43:44] 2026-02-08 08:34:53,856 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-08 09:43:44] 2026-02-08 08:34:53,857 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-08 09:43:44] 2026-02-08 08:34:53,860 | INFO     | fitting pss+swap vs Time
[2026-02-08 09:43:44] 2026-02-08 08:34:53,860 | INFO     | sum of square deviations: 1318277740.5
[2026-02-08 09:43:44] 2026-02-08 08:34:53,861 | INFO     | sum of deviations: 5948644665.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,862 | INFO     | mean x: 1770534763.5
[2026-02-08 09:43:44] 2026-02-08 08:34:53,862 | INFO     | mean y: 2308250.185185185
[2026-02-08 09:43:44] 2026-02-08 08:34:53,862 | INFO     | intersect: -7987117537.355307
[2026-02-08 09:43:44] 2026-02-08 08:34:53,862 | INFO     | chi2: 2.1008203919693234
[2026-02-08 09:43:44] 2026-02-08 08:34:53,862 | INFO     | sum of square deviations: 1199940638.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,863 | INFO     | sum of deviations: 15708353816.999998
[2026-02-08 09:43:44] 2026-02-08 08:34:53,863 | INFO     | mean x: 1770534611.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,864 | INFO     | mean y: 2320501.8152866242
[2026-02-08 09:43:44] 2026-02-08 08:34:53,864 | INFO     | intersect: -23175646169.259705
[2026-02-08 09:43:44] 2026-02-08 08:34:53,864 | INFO     | chi2: 1.3099636334754112
[2026-02-08 09:43:44] 2026-02-08 08:34:53,864 | INFO     | current chi2=1.3099636334754112 (change=37.64513908552447 %)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,864 | INFO     | sum of square deviations: 1088905998.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,865 | INFO     | sum of deviations: 15177686696.000004
[2026-02-08 09:43:44] 2026-02-08 08:34:53,865 | INFO     | mean x: 1770534458.5
[2026-02-08 09:43:44] 2026-02-08 08:34:53,865 | INFO     | mean y: 2319772.710526316
[2026-02-08 09:43:44] 2026-02-08 08:34:53,866 | INFO     | intersect: -24676226717.93432
[2026-02-08 09:43:44] 2026-02-08 08:34:53,866 | INFO     | chi2: 1.31123897743244
[2026-02-08 09:43:44] 2026-02-08 08:34:53,866 | INFO     | current chi2=1.31123897743244 (change=-0.09735720324122363 %)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,866 | INFO     | right removable region: 151
[2026-02-08 09:43:44] 2026-02-08 08:34:53,866 | INFO     | sum of square deviations: 1199940638.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,867 | INFO     | sum of deviations: -13936437102.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,867 | INFO     | mean x: 1770534916.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,868 | INFO     | mean y: 2333460.0700636944
[2026-02-08 09:43:44] 2026-02-08 08:34:53,868 | INFO     | intersect: 20565807778.97954
[2026-02-08 09:43:44] 2026-02-08 08:34:53,868 | INFO     | chi2: 0.8350316750897046
[2026-02-08 09:43:44] 2026-02-08 08:34:53,868 | INFO     | current chi2=0.8350316750897046 (change=60.252114922259494 %)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,868 | INFO     | sum of square deviations: 1088905998.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,869 | INFO     | sum of deviations: -12656634105.000002
[2026-02-08 09:43:44] 2026-02-08 08:34:53,869 | INFO     | mean x: 1770535068.5
[2026-02-08 09:43:44] 2026-02-08 08:34:53,869 | INFO     | mean y: 2331696.802631579
[2026-02-08 09:43:44] 2026-02-08 08:34:53,870 | INFO     | intersect: 20581715567.61828
[2026-02-08 09:43:44] 2026-02-08 08:34:53,870 | INFO     | chi2: 0.8349707036596873
[2026-02-08 09:43:44] 2026-02-08 08:34:53,870 | INFO     | current chi2=0.8349707036596873 (change=0.007301690682657618 %)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,870 | INFO     | left removable region: 20
[2026-02-08 09:43:44] 2026-02-08 08:34:53,870 | INFO     | sum of square deviations: 697054930.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,871 | INFO     | sum of deviations: 615829953.0000001
[2026-02-08 09:43:44] 2026-02-08 08:34:53,871 | INFO     | mean x: 1770535038.0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,871 | INFO     | mean y: 2339454.5572519084
[2026-02-08 09:43:44] 2026-02-08 08:34:53,871 | INFO     | intersect: -1561882333.8696566
[2026-02-08 09:43:44] 2026-02-08 08:34:53,871 | INFO     | chi2: 0.006666840552229478
[2026-02-08 09:43:44] 2026-02-08 08:34:53,872 | INFO     | current memory leak: 0.88 B/s (using 131 data points, chi2=0.01)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,872 | INFO     | could have reported an average CPU frequency of 2721 MHz (9 samples)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,872 | INFO     | ..............................
[2026-02-08 09:43:44] 2026-02-08 08:34:53,872 | INFO     | . Timing measurements:
[2026-02-08 09:43:44] 2026-02-08 08:34:53,872 | INFO     | . get job = 0 s
[2026-02-08 09:43:44] 2026-02-08 08:34:53,873 | INFO     | . initial setup = 8 s
[2026-02-08 09:43:44] 2026-02-08 08:34:53,873 | INFO     | . payload setup = 9 s
[2026-02-08 09:43:44] 2026-02-08 08:34:53,873 | INFO     | . stage-in = 0 s
[2026-02-08 09:43:44] 2026-02-08 08:34:53,873 | INFO     | . payload execution = 9843 s
[2026-02-08 09:43:44] 2026-02-08 08:34:53,873 | INFO     | . stage-out = 0 s
[2026-02-08 09:43:44] 2026-02-08 08:34:53,873 | INFO     | . log creation = 0 s
[2026-02-08 09:43:44] 2026-02-08 08:34:53,873 | INFO     | ..............................
[2026-02-08 09:43:44] 2026-02-08 08:34:53,964 | INFO     | 
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | job summary report
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | --------------------------------------------------
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | PanDA job id: 7000583385
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | task id: 48317952
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | errors: (none)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | pilot state: finished 
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | transexitcode: 0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | exeerrorcode: 0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,965 | INFO     | exeerrordiag: 
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | exitcode: 0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | exitmsg: OK
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | cpuconsumptiontime: 37710 s
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | nevents: 400
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | neventsw: 0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | pid: 2439324
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | pgrp: 2439324
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | corecount: 4
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | event service: False
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | sizes: {0: 2282613, 1: 2283130, 12: 2283130, 9856: 2312176, 9857: 2321456}
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | --------------------------------------------------
[2026-02-08 09:43:44] 2026-02-08 08:34:53,966 | INFO     | 
[2026-02-08 09:43:44] 2026-02-08 08:34:53,967 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2026-02-08 09:43:44] 2026-02-08 08:34:53,997 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,997 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,997 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,998 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | job 7000583385 has completed (purged errors)
[2026-02-08 09:43:44] 2026-02-08 08:34:53,999 | INFO     | overall cleanup function is called
[2026-02-08 09:43:44] 2026-02-08 08:34:55,008 | INFO     | --- collectZombieJob: --- 10, [2439324]
[2026-02-08 09:43:44] 2026-02-08 08:34:55,009 | INFO     | zombie collector waiting for pid 2439324
[2026-02-08 09:43:44] 2026-02-08 08:34:55,009 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-08 09:43:44] 2026-02-08 08:34:55,009 | INFO     | collected zombie processes
[2026-02-08 09:43:44] 2026-02-08 08:34:55,009 | INFO     | will attempt to kill all subprocesses of pid=2439324
[2026-02-08 09:43:44] 2026-02-08 08:34:55,839 | INFO     | process IDs to be killed: [2439324] (in reverse order)
[2026-02-08 09:43:44] 2026-02-08 08:34:56,111 | WARNING  | found no corresponding commands to process id(s)
[2026-02-08 09:43:44] 2026-02-08 08:34:56,111 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-08 09:43:44] 2026-02-08 08:34:56,148 | INFO     | did not find any defunct processes belonging to 2439324
[2026-02-08 09:43:44] 2026-02-08 08:34:56,181 | INFO     | did not find any defunct processes belonging to 2439324
[2026-02-08 09:43:44] 2026-02-08 08:34:56,182 | INFO     | ready for new job
[2026-02-08 09:43:44] 2026-02-08 08:34:56,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-08 09:43:44] 2026-02-08 08:34:56,185 | INFO     | **************************************
[2026-02-08 09:43:44] 2026-02-08 08:34:56,185 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-08 09:43:44] 2026-02-08 08:34:56,185 | INFO     | **************************************
[2026-02-08 09:43:44] 2026-02-08 08:34:56,185 | INFO     | 
[2026-02-08 09:43:44] 2026-02-08 08:34:56,194 | INFO     | architecture information:
[2026-02-08 09:43:44] 2026-02-08 08:34:56,194 | INFO     | executing command: cat /etc/os-release
[2026-02-08 09:43:44] 2026-02-08 08:34:56,221 | INFO     | cat /etc/os-release:
[2026-02-08 09:43:44] NAME="CentOS Linux"
[2026-02-08 09:43:44] VERSION="7 (Core)"
[2026-02-08 09:43:44] ID="centos"
[2026-02-08 09:43:44] ID_LIKE="rhel fedora"
[2026-02-08 09:43:44] VERSION_ID="7"
[2026-02-08 09:43:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-08 09:43:44] ANSI_COLOR="0;31"
[2026-02-08 09:43:44] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-08 09:43:44] HOME_URL="https://www.centos.org/"
[2026-02-08 09:43:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-08 09:43:44] 
[2026-02-08 09:43:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-08 09:43:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-08 09:43:44] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-08 09:43:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-08 09:43:44] 
[2026-02-08 09:43:44] 2026-02-08 08:34:56,221 | INFO     | **************************************
[2026-02-08 09:43:44] 2026-02-08 08:34:56,724 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2026-02-08 09:43:44] 2026-02-08 08:34:56,747 | INFO     | sufficient remaining disk space (3222499491840 B)
[2026-02-08 09:43:44] 2026-02-08 08:34:56,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-08 09:43:44] 2026-02-08 08:34:56,747 | INFO     | current server update state: UPDATING_FINAL
[2026-02-08 09:43:44] 2026-02-08 08:34:56,747 | INFO     | update_server=False
[2026-02-08 09:43:44] 2026-02-08 08:34:56,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-08 09:43:44] 2026-02-08 08:34:56,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-08 09:43:44] 2026-02-08 08:34:56,757 | INFO     | all data control threads have been joined
[2026-02-08 09:43:44] 2026-02-08 08:34:56,919 | INFO     | all job control threads have been joined
[2026-02-08 09:43:44] 2026-02-08 08:34:57,182 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-08 09:43:44] 2026-02-08 08:34:57,183 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-08 09:43:44] 2026-02-08 08:34:57,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-08 09:43:44] 2026-02-08 08:34:57,183 | INFO     | will abort loop
[2026-02-08 09:43:44] 2026-02-08 08:34:57,654 | INFO     | all payload control threads have been joined
[2026-02-08 09:43:44] 2026-02-08 08:34:57,753 | INFO     | [job] retrieve thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:57,762 | INFO     | [data] control thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:57,826 | INFO     | [payload] execute_payloads thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:57,925 | INFO     | [job] control thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:57,994 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:58,185 | INFO     | [job] job monitor thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:58,224 | INFO     | [payload] validate_post thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:58,238 | INFO     | [job] create_data_payload thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:58,269 | INFO     | [job] validate thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:58,660 | INFO     | [payload] control thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:58,752 | INFO     | [data] copytool_out thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:58,810 | INFO     | [payload] validate_pre thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:58,974 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-08 09:43:44] 2026-02-08 08:34:58,999 | INFO     | [data] copytool_in thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:59,044 | INFO     | [payload] failed_post thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:34:59,831 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-08 09:43:44] 2026-02-08 08:34:59,979 | INFO     | [job] queue monitor thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:35:03,836 | INFO     | [data] queue_monitor thread has finished
[2026-02-08 09:43:44] 2026-02-08 08:35:15,503 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-02-08 09:43:44] 2026-02-08 08:35:26,783 | INFO     | PID=2434305 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-08 09:43:44] 2026-02-08 08:35:26,783 | INFO     | .. there are 7 such processes running
[2026-02-08 09:43:44] 2026-02-08 08:35:26,783 | INFO     | found 0 job(s) in 20 queues
[2026-02-08 09:43:44] 2026-02-08 08:35:26,784 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-08 09:43:44] 2026-02-08 08:35:26,784 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-08 09:43:44] 2026-02-08 08:35:40,533 | INFO     | [monitor] cgroup control has ended
[2026-02-08 09:43:44] 2026-02-08 08:35:41,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22585188304704)>', '<ExcThread(monitor, started 22584609457920)>']
[2026-02-08 09:43:44] 2026-02-08 08:35:41,858 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-08 09:43:44] 2026-02-08 08:35:41,859 | INFO     | [monitor] control thread has ended
[2026-02-08 09:43:44] 2026-02-08 08:35:46,600 | INFO     | all workflow threads have been joined
[2026-02-08 09:43:44] 2026-02-08 08:35:46,601 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-08 09:43:44] 2026-02-08 08:35:46,601 | INFO     | traces error code: 0
[2026-02-08 09:43:44] 2026-02-08 08:35:46,601 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-08 09:43:44] 2026-02-08 08:35:46,789 [wrapper] ==== pilot stdout END ====
[2026-02-08 09:43:44] 2026-02-08 08:35:46,793 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-08 09:43:44] 2026-02-08 08:35:46,797 [wrapper] pilotpid: 2434305
[2026-02-08 09:43:44] 2026-02-08 08:35:46,801 [wrapper] Pilot exit status: 0
[2026-02-08 09:43:44] 2026-02-08 08:35:46,815 [wrapper] pandaids: 7000583385
[2026-02-08 09:43:44] 2026-02-08 08:35:47,003 [wrapper] cleanup supervisor_pilot 2611926 2434306
[2026-02-08 09:43:44] 2026-02-08 08:35:47,008 [wrapper] Test setup, not cleaning
[2026-02-08 09:43:44] 2026-02-08 08:35:47,012 [wrapper] apfmon messages muted
[2026-02-08 09:43:44] 2026-02-08 08:35:47,016 [wrapper] ==== wrapper stdout END ====
[2026-02-08 09:43:44] 2026-02-08 08:35:47,020 [wrapper] ==== wrapper stderr END ====
[2026-02-08 09:43:44]  *** Error codes and diagnostics ***
[2026-02-08 09:43:44]     "exeErrorCode": 0,
[2026-02-08 09:43:44]     "exeErrorDiag": "",
[2026-02-08 09:43:44]     "pilotErrorCode": 0,
[2026-02-08 09:43:44]     "pilotErrorDiag": "",
[2026-02-08 09:43:44]  *** Listing of results directory ***
[2026-02-08 09:43:44] total 673004
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc    584422 Feb  4 02:26 pilot3.tar.gz
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc      5111 Feb  4 02:27 queuedata.json
[2026-02-08 09:43:44] -rwx------ 1 boinc boinc     36322 Feb  4 02:27 runpilot2-wrapper.sh
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc       100 Feb  8 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-08 09:43:44] -rwxr-xr-x 1 boinc boinc      7986 Feb  8 05:59 run_atlas
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc       105 Feb  8 05:59 job.xml
[2026-02-08 09:43:44] -rw-r--r-- 2 boinc boinc 503248091 Feb  8 06:50 EVNT.48317949._000217.pool.root.1
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc      6693 Feb  8 06:50 init_data.xml
[2026-02-08 09:43:44] -rw-r--r-- 2 boinc boinc     15845 Feb  8 06:50 start_atlas.sh
[2026-02-08 09:43:44] drwxrwx--x 2 boinc boinc      4096 Feb  8 06:50 shared
[2026-02-08 09:43:44] -rw-r--r-- 2 boinc boinc    597752 Feb  8 06:50 input.tar.gz
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc         0 Feb  8 06:50 boinc_lockfile
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc      2523 Feb  8 06:50 pandaJob.out
[2026-02-08 09:43:44] -rw------- 1 boinc boinc   1009510 Feb  8 06:50 agis_schedconf.cvmfs.json
[2026-02-08 09:43:44] -rw------- 1 boinc boinc   1513088 Feb  8 06:50 agis_ddmendpoints.agis.ALL.json
[2026-02-08 09:43:44] -rw------- 1 boinc boinc       444 Feb  8 06:50 workernode_map.json
[2026-02-08 09:43:44] drwx------ 5 boinc boinc      4096 Feb  8 06:50 pilot3
[2026-02-08 09:43:44] -rw------- 1 boinc boinc 178501848 Feb  8 09:34 HITS.48317952._011530.pool.root.1
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc       529 Feb  8 09:34 boinc_task_state.xml
[2026-02-08 09:43:44] -rw------- 1 boinc boinc        95 Feb  8 09:34 pilot_heartbeat.json
[2026-02-08 09:43:44] -rw------- 1 boinc boinc      1042 Feb  8 09:34 memory_monitor_summary.json
[2026-02-08 09:43:44] -rw------- 1 boinc boinc    349022 Feb  8 09:34 log.48317952._011530.job.log.tgz.1
[2026-02-08 09:43:44] -rw------- 1 boinc boinc      6350 Feb  8 09:34 heartbeat.json
[2026-02-08 09:43:44] -rw------- 1 boinc boinc      5017 Feb  8 09:35 pilotlog.txt
[2026-02-08 09:43:44] -rw------- 1 boinc boinc   1380246 Feb  8 09:35 log.48317952._011530.job.log.1
[2026-02-08 09:43:44] -rw------- 1 boinc boinc       357 Feb  8 09:35 output.list
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc       620 Feb  8 09:35 runtime_log
[2026-02-08 09:43:44] -rw------- 1 boinc boinc   1751040 Feb  8 09:35 result.tar.gz
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc      9221 Feb  8 09:35 runtime_log.err
[2026-02-08 09:43:44] -rw------- 1 boinc boinc       663 Feb  8 09:35 gg3KDmdrg78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmZIWKDmPVoT2n.diag
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc        26 Feb  8 09:43 wrapper_checkpoint.txt
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc      8192 Feb  8 09:43 boinc_mmap_file
[2026-02-08 09:43:44] -rw-r--r-- 1 boinc boinc     20807 Feb  8 09:43 stderr.txt
[2026-02-08 09:43:44] HITS file was successfully produced:
[2026-02-08 09:43:44] -rw------- 1 boinc boinc 178501848 Feb  8 09:34 shared/HITS.pool.root.1
[2026-02-08 09:43:44]  *** Contents of shared directory: ***
[2026-02-08 09:43:44] total 668096
[2026-02-08 09:43:44] -rw-r--r-- 2 boinc boinc 503248091 Feb  8 06:50 ATLAS.root_0
[2026-02-08 09:43:44] -rw-r--r-- 2 boinc boinc     15845 Feb  8 06:50 start_atlas.sh
[2026-02-08 09:43:44] -rw-r--r-- 2 boinc boinc    597752 Feb  8 06:50 input.tar.gz
[2026-02-08 09:43:44] -rw------- 1 boinc boinc 178501848 Feb  8 09:34 HITS.pool.root.1
[2026-02-08 09:43:44] -rw------- 1 boinc boinc   1751040 Feb  8 09:35 result.tar.gz
09:43:45 (2430191): run_atlas exited; CPU time 38409.337700
09:43:45 (2430191): called boinc_finish(0)

</stderr_txt>
]]>

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