Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
07:07:20 (2632778): wrapper (7.7.26015): starting
07:07:20 (2632778): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 07:07:20] Arguments: --nthreads 8
[2026-02-04 07:07:20] Threads: 8
[2026-02-04 07:07:20] Checking for CVMFS
[2026-02-04 07:07:21] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 07:07:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 07:07:21] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 07:07:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 07:07:22] 2.13.3.0 9473 130783 204884 155866 3 452 32184012 32935937 16932 16776704 0 628212912 99.745 421064454 33368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-04 07:07:22] CVMFS is ok
[2026-02-04 07:07:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 07:07:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 07:07:22] Further information can be found at the LHC@home message board.
[2026-02-04 07:07:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 07:07:22] Checking for apptainer binary...
[2026-02-04 07:07:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 07:07:22] Running /usr/bin/apptainer --version
[2026-02-04 07:07:23] apptainer version 1.4.5-2.el9
[2026-02-04 07:07:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 07:07:24] c-4-11.aglt2.org
[2026-02-04 07:07:24] apptainer works
[2026-02-04 07:07:24] Set ATHENA_PROC_NUMBER=8
[2026-02-04 07:07:24] Set ATHENA_CORE_NUMBER=8
[2026-02-04 07:07:24] Starting ATLAS job with PandaID=6994756852
[2026-02-04 07:07:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 12:50:46]  *** The last 200 lines of the pilot log: ***
[2026-02-04 12:50:46] 2026-02-04 17:49:42,831 | INFO     | job 6994756852 has finished - writing final server update
[2026-02-04 12:50:46] 2026-02-04 17:49:42,831 | INFO     | total number of processed events: 400 (read)
[2026-02-04 12:50:46] 2026-02-04 17:49:42,844 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6994756852/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 12:50:46] 2026-02-04 17:49:42,845 | INFO     | extracted standard info from prmon json
[2026-02-04 12:50:46] 2026-02-04 17:49:42,845 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 12:50:46] 2026-02-04 17:49:42,845 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 12:50:46] 2026-02-04 17:49:42,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 12:50:46] 2026-02-04 17:49:42,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 12:50:46] 2026-02-04 17:49:42,855 | INFO     | fitting pss+swap vs Time
[2026-02-04 12:50:46] 2026-02-04 17:49:42,856 | INFO     | sum of square deviations: 11553336647.61682
[2026-02-04 12:50:46] 2026-02-04 17:49:42,859 | INFO     | sum of deviations: -158756079225.51498
[2026-02-04 12:50:46] 2026-02-04 17:49:42,859 | INFO     | mean x: 1770217173.6886227
[2026-02-04 12:50:46] 2026-02-04 17:49:42,859 | INFO     | mean y: 2793161.706586826
[2026-02-04 12:50:46] 2026-02-04 17:49:42,859 | INFO     | intersect: 24327604810.85459
[2026-02-04 12:50:46] 2026-02-04 17:49:42,860 | INFO     | chi2: 3.727343585868516
[2026-02-04 12:50:46] 2026-02-04 17:49:42,860 | INFO     | sum of square deviations: 11042211394.936136
[2026-02-04 12:50:46] 2026-02-04 17:49:42,863 | INFO     | sum of deviations: -147716056261.7234
[2026-02-04 12:50:46] 2026-02-04 17:49:42,864 | INFO     | mean x: 1770217021.1914895
[2026-02-04 12:50:46] 2026-02-04 17:49:42,864 | INFO     | mean y: 2796458.5987841943
[2026-02-04 12:50:46] 2026-02-04 17:49:42,864 | INFO     | intersect: 23683694038.38061
[2026-02-04 12:50:46] 2026-02-04 17:49:42,864 | INFO     | chi2: 3.7266432051647986
[2026-02-04 12:50:46] 2026-02-04 17:49:42,864 | INFO     | current chi2=3.7266432051647986 (change=0.018790344586770567 %)
[2026-02-04 12:50:46] 2026-02-04 17:49:42,865 | INFO     | right removable region: 328
[2026-02-04 12:50:46] 2026-02-04 17:49:42,865 | INFO     | sum of square deviations: 11042193094.316
[2026-02-04 12:50:46] 2026-02-04 17:49:42,868 | INFO     | sum of deviations: -251849650511.1945
[2026-02-04 12:50:46] 2026-02-04 17:49:42,868 | INFO     | mean x: 1770217326.1884499
[2026-02-04 12:50:46] 2026-02-04 17:49:42,868 | INFO     | mean y: 2820845.422492401
[2026-02-04 12:50:46] 2026-02-04 17:49:42,868 | INFO     | intersect: 40377827071.21597
[2026-02-04 12:50:46] 2026-02-04 17:49:42,869 | INFO     | chi2: 0.9842984964354279
[2026-02-04 12:50:46] 2026-02-04 17:49:42,869 | INFO     | current chi2=0.9842984964354279 (change=73.59249358800191 %)
[2026-02-04 12:50:46] 2026-02-04 17:49:42,870 | INFO     | sum of square deviations: 10546332329.135767
[2026-02-04 12:50:46] 2026-02-04 17:49:42,872 | INFO     | sum of deviations: -273335994287.51855
[2026-02-04 12:50:46] 2026-02-04 17:49:42,873 | INFO     | mean x: 1770217478.691358
[2026-02-04 12:50:46] 2026-02-04 17:49:42,873 | INFO     | mean y: 2827432.314814815
[2026-02-04 12:50:46] 2026-02-04 17:49:42,873 | INFO     | intersect: 45882678317.20509
[2026-02-04 12:50:46] 2026-02-04 17:49:42,873 | INFO     | chi2: 0.7093939185732434
[2026-02-04 12:50:46] 2026-02-04 17:49:42,873 | INFO     | current chi2=0.7093939185732434 (change=27.928984841258348 %)
[2026-02-04 12:50:46] 2026-02-04 17:49:42,874 | INFO     | sum of square deviations: 10065581262.714691
[2026-02-04 12:50:46] 2026-02-04 17:49:42,877 | INFO     | sum of deviations: -277345632992.66455
[2026-02-04 12:50:46] 2026-02-04 17:49:42,877 | INFO     | mean x: 1770217631.1880877
[2026-02-04 12:50:46] 2026-02-04 17:49:42,877 | INFO     | mean y: 2828687.8777429466
[2026-02-04 12:50:46] 2026-02-04 17:49:42,877 | INFO     | intersect: 48779160291.823555
[2026-02-04 12:50:46] 2026-02-04 17:49:42,878 | INFO     | chi2: 0.6305118104819512
[2026-02-04 12:50:46] 2026-02-04 17:49:42,878 | INFO     | current chi2=0.6305118104819512 (change=11.119648199119407 %)
[2026-02-04 12:50:46] 2026-02-04 17:49:42,878 | INFO     | left removable region: 30
[2026-02-04 12:50:46] 2026-02-04 17:49:42,878 | INFO     | sum of square deviations: 8205755397.073858
[2026-02-04 12:50:46] 2026-02-04 17:49:42,881 | INFO     | sum of deviations: -252227667590.5101
[2026-02-04 12:50:46] 2026-02-04 17:49:42,881 | INFO     | mean x: 1770217905.6778524
[2026-02-04 12:50:46] 2026-02-04 17:49:42,881 | INFO     | mean y: 2829953.953020134
[2026-02-04 12:50:46] 2026-02-04 17:49:42,881 | INFO     | intersect: 54415606337.13668
[2026-02-04 12:50:46] 2026-02-04 17:49:42,882 | INFO     | chi2: 0.5558962493726413
[2026-02-04 12:50:46] 2026-02-04 17:49:42,882 | INFO     | current memory leak: -30.74 B/s (using 298 data points, chi2=0.56)
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | could have reported an average CPU frequency of 2599 MHz (15 samples)
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | ..............................
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | . Timing measurements:
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | . get job = 0 s
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | . initial setup = 32 s
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | . payload setup = 41 s
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | . stage-in = 0 s
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | . payload execution = 20385 s
[2026-02-04 12:50:46] 2026-02-04 17:49:42,883 | INFO     | . stage-out = 3 s
[2026-02-04 12:50:46] 2026-02-04 17:49:42,884 | INFO     | . log creation = 0 s
[2026-02-04 12:50:46] 2026-02-04 17:49:42,884 | INFO     | ..............................
[2026-02-04 12:50:46] 2026-02-04 17:49:43,084 | INFO     | 
[2026-02-04 12:50:46] 2026-02-04 17:49:43,088 | INFO     | job summary report
[2026-02-04 12:50:46] 2026-02-04 17:49:43,088 | INFO     | --------------------------------------------------
[2026-02-04 12:50:46] 2026-02-04 17:49:43,088 | INFO     | PanDA job id: 6994756852
[2026-02-04 12:50:46] 2026-02-04 17:49:43,088 | INFO     | task id: 48442031
[2026-02-04 12:50:46] 2026-02-04 17:49:43,088 | INFO     | errors: (none)
[2026-02-04 12:50:46] 2026-02-04 17:49:43,088 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | pilot state: finished 
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | transexitcode: 0
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | exeerrorcode: 0
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | exeerrordiag: 
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | exitcode: 0
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | exitmsg: OK
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | cpuconsumptiontime: 49558 s
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | nevents: 400
[2026-02-04 12:50:46] 2026-02-04 17:49:43,089 | INFO     | neventsw: 0
[2026-02-04 12:50:46] 2026-02-04 17:49:43,090 | INFO     | pid: 2647585
[2026-02-04 12:50:46] 2026-02-04 17:49:43,090 | INFO     | pgrp: 2647585
[2026-02-04 12:50:46] 2026-02-04 17:49:43,090 | INFO     | corecount: 8
[2026-02-04 12:50:46] 2026-02-04 17:49:43,090 | INFO     | event service: False
[2026-02-04 12:50:46] 2026-02-04 17:49:43,090 | INFO     | sizes: {0: 2277736, 1: 2277820, 2: 2278281, 20431: 2311746, 20434: 2320744, 20436: 2320800, 20438: 2321122}
[2026-02-04 12:50:46] 2026-02-04 17:49:43,090 | INFO     | --------------------------------------------------
[2026-02-04 12:50:46] 2026-02-04 17:49:43,090 | INFO     | 
[2026-02-04 12:50:46] 2026-02-04 17:49:43,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-02-04 12:50:46] 2026-02-04 17:49:43,118 | INFO     | time since job start (20440s) is within the limit (349056.0s)
[2026-02-04 12:50:46] 2026-02-04 17:49:43,161 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,162 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,162 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,162 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,162 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,162 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,162 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,162 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,162 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 12:50:46] 2026-02-04 17:49:43,163 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,164 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 12:50:46] 2026-02-04 17:49:43,164 | INFO     | job 6994756852 has completed (purged errors)
[2026-02-04 12:50:46] 2026-02-04 17:49:43,164 | INFO     | overall cleanup function is called
[2026-02-04 12:50:46] 2026-02-04 17:49:44,173 | INFO     | --- collectZombieJob: --- 10, [2647585]
[2026-02-04 12:50:46] 2026-02-04 17:49:44,173 | INFO     | zombie collector waiting for pid 2647585
[2026-02-04 12:50:46] 2026-02-04 17:49:44,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 12:50:46] 2026-02-04 17:49:44,173 | INFO     | collected zombie processes
[2026-02-04 12:50:46] 2026-02-04 17:49:44,173 | INFO     | will attempt to kill all subprocesses of pid=2647585
[2026-02-04 12:50:46] 2026-02-04 17:49:44,877 | INFO     | process IDs to be killed: [2647585] (in reverse order)
[2026-02-04 12:50:46] 2026-02-04 17:49:45,090 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 12:50:46] 2026-02-04 17:49:45,094 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 12:50:46] 2026-02-04 17:49:45,110 | INFO     | did not find any defunct processes belonging to 2647585
[2026-02-04 12:50:46] 2026-02-04 17:49:45,144 | INFO     | did not find any defunct processes belonging to 2647585
[2026-02-04 12:50:46] 2026-02-04 17:49:45,144 | INFO     | ready for new job
[2026-02-04 12:50:46] 2026-02-04 17:49:45,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 12:50:46] 2026-02-04 17:49:45,147 | INFO     | **************************************
[2026-02-04 12:50:46] 2026-02-04 17:49:45,147 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 12:50:46] 2026-02-04 17:49:45,147 | INFO     | **************************************
[2026-02-04 12:50:46] 2026-02-04 17:49:45,147 | INFO     | 
[2026-02-04 12:50:46] 2026-02-04 17:49:45,160 | INFO     | architecture information:
[2026-02-04 12:50:46] 2026-02-04 17:49:45,168 | INFO     | executing command: cat /etc/os-release
[2026-02-04 12:50:46] 2026-02-04 17:49:45,255 | INFO     | cat /etc/os-release:
[2026-02-04 12:50:46] NAME="CentOS Linux"
[2026-02-04 12:50:46] VERSION="7 (Core)"
[2026-02-04 12:50:46] ID="centos"
[2026-02-04 12:50:46] ID_LIKE="rhel fedora"
[2026-02-04 12:50:46] VERSION_ID="7"
[2026-02-04 12:50:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 12:50:46] ANSI_COLOR="0;31"
[2026-02-04 12:50:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 12:50:46] HOME_URL="https://www.centos.org/"
[2026-02-04 12:50:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 12:50:46] 
[2026-02-04 12:50:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 12:50:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 12:50:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 12:50:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 12:50:46] 
[2026-02-04 12:50:46] 2026-02-04 17:49:45,255 | INFO     | **************************************
[2026-02-04 12:50:46] 2026-02-04 17:49:45,759 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-02-04 12:50:46] 2026-02-04 17:49:45,835 | INFO     | sufficient remaining disk space (75973525504 B)
[2026-02-04 12:50:46] 2026-02-04 17:49:45,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 12:50:46] 2026-02-04 17:49:45,836 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 12:50:46] 2026-02-04 17:49:45,836 | INFO     | update_server=False
[2026-02-04 12:50:46] 2026-02-04 17:49:45,836 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 12:50:46] 2026-02-04 17:49:45,836 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 12:50:46] 2026-02-04 17:49:45,990 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 12:50:46] 2026-02-04 17:49:45,990 | INFO     | aborting loop
[2026-02-04 12:50:46] 2026-02-04 17:49:46,111 | INFO     | all payload control threads have been joined
[2026-02-04 12:50:46] 2026-02-04 17:49:46,297 | INFO     | all job control threads have been joined
[2026-02-04 12:50:46] 2026-02-04 17:49:46,407 | INFO     | all data control threads have been joined
[2026-02-04 12:50:46] 2026-02-04 17:49:46,841 | INFO     | [job] retrieve thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:46,904 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:46,944 | INFO     | [payload] failed_post thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:46,996 | INFO     | [job] job monitor thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:47,117 | INFO     | [payload] control thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:47,308 | INFO     | [job] control thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:47,357 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:47,413 | INFO     | [data] control thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:47,629 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 12:50:46] 2026-02-04 17:49:47,802 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:47,843 | INFO     | [data] copytool_out thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:47,912 | INFO     | [job] validate thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:48,006 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 12:50:46] 2026-02-04 17:49:48,210 | INFO     | [payload] validate_post thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:48,270 | INFO     | [data] copytool_in thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:49,012 | INFO     | [job] queue monitor thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:51,638 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:49:56,694 | INFO     | job.realtimelogging is not enabled
[2026-02-04 12:50:46] 2026-02-04 17:49:57,703 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 12:50:46] 2026-02-04 17:50:16,797 | INFO     | PID=2640369 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 12:50:46] 2026-02-04 17:50:16,797 | INFO     | .. there are 34 such processes running
[2026-02-04 12:50:46] 2026-02-04 17:50:16,797 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 12:50:46] 2026-02-04 17:50:16,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 12:50:46] 2026-02-04 17:50:16,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 12:50:46] 2026-02-04 17:50:38,511 | INFO     | [monitor] cgroup control has ended
[2026-02-04 12:50:46] 2026-02-04 17:50:40,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294035896128)>', '<ExcThread(monitor, started 140293009561344)>']
[2026-02-04 12:50:46] 2026-02-04 17:50:40,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 12:50:46] 2026-02-04 17:50:40,948 | INFO     | [monitor] control thread has ended
[2026-02-04 12:50:46] 2026-02-04 17:50:45,407 | INFO     | all workflow threads have been joined
[2026-02-04 12:50:46] 2026-02-04 17:50:45,407 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 12:50:46] 2026-02-04 17:50:45,407 | INFO     | traces error code: 0
[2026-02-04 12:50:46] 2026-02-04 17:50:45,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 12:50:46] 2026-02-04 17:50:45,719 [wrapper] ==== pilot stdout END ====
[2026-02-04 12:50:46] 2026-02-04 17:50:45,737 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 12:50:46] 2026-02-04 17:50:45,756 [wrapper] pilotpid: 2640369
[2026-02-04 12:50:46] 2026-02-04 17:50:45,779 [wrapper] Pilot exit status: 0
[2026-02-04 12:50:46] 2026-02-04 17:50:45,845 [wrapper] pandaids: 6994756852
[2026-02-04 12:50:46] 2026-02-04 17:50:46,046 [wrapper] cleanup supervisor_pilot 3726792 2640370
[2026-02-04 12:50:46] 2026-02-04 17:50:46,051 [wrapper] Test setup, not cleaning
[2026-02-04 12:50:46] 2026-02-04 17:50:46,076 [wrapper] apfmon messages muted
[2026-02-04 12:50:46] 2026-02-04 17:50:46,108 [wrapper] ==== wrapper stdout END ====
[2026-02-04 12:50:46] 2026-02-04 17:50:46,141 [wrapper] ==== wrapper stderr END ====
[2026-02-04 12:50:46]  *** Error codes and diagnostics ***
[2026-02-04 12:50:46]     "exeErrorCode": 0,
[2026-02-04 12:50:46]     "exeErrorDiag": "",
[2026-02-04 12:50:46]     "pilotErrorCode": 0,
[2026-02-04 12:50:46]     "pilotErrorDiag": "",
[2026-02-04 12:50:46]  *** Listing of results directory ***
[2026-02-04 12:50:46] total 675640
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas    584422 Feb  3 22:08 pilot3.tar.gz
[2026-02-04 12:50:46] -rwx------. 1 boincer umatlas     36322 Feb  3 22:09 runpilot2-wrapper.sh
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 22:09 queuedata.json
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas       100 Feb  4 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 12:50:46] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  4 07:07 run_atlas
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas       105 Feb  4 07:07 job.xml
[2026-02-04 12:50:46] -rw-r--r--. 2 boincer umatlas 491899758 Feb  4 07:07 EVNT.48442027._000026.pool.root.1
[2026-02-04 12:50:46] drwxrwx--x. 2 boincer umatlas      4096 Feb  4 07:07 shared
[2026-02-04 12:50:46] -rw-r--r--. 2 boincer umatlas    597759 Feb  4 07:07 input.tar.gz
[2026-02-04 12:50:46] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 07:07 start_atlas.sh
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas         0 Feb  4 07:07 boinc_lockfile
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas      2527 Feb  4 07:07 pandaJob.out
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas        57 Feb  4 07:07 setup.sh.local
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas   1009228 Feb  4 07:08 agis_schedconf.cvmfs.json
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas       440 Feb  4 07:09 workernode_map.json
[2026-02-04 12:50:46] drwx------. 5 boincer umatlas      4096 Feb  4 07:09 pilot3
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas      6659 Feb  4 12:45 init_data.xml
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas 189701913 Feb  4 12:48 HITS.48442031._001269.pool.root.1
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas       531 Feb  4 12:48 boinc_task_state.xml
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas      1042 Feb  4 12:49 memory_monitor_summary.json
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas        95 Feb  4 12:49 pilot_heartbeat.json
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas   1511668 Feb  4 12:49 agis_ddmendpoints.agis.ALL.json
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas    542105 Feb  4 12:49 log.48442031._001269.job.log.tgz.1
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas      6389 Feb  4 12:49 heartbeat.json
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas        28 Feb  4 12:50 wrapper_checkpoint.txt
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas      4892 Feb  4 12:50 pilotlog.txt
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 12:50 boinc_mmap_file
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas   2611933 Feb  4 12:50 log.48442031._001269.job.log.1
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas       357 Feb  4 12:50 output.list
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas       620 Feb  4 12:50 runtime_log
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas   3174400 Feb  4 12:50 result.tar.gz
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas      9332 Feb  4 12:50 runtime_log.err
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas       655 Feb  4 12:50 BgFNDmqRi78n9Rq4apOajLDm4fhM0noT9bVooX4SDmwCWKDmLekRZm.diag
[2026-02-04 12:50:46] -rw-r--r--. 1 boincer umatlas     21132 Feb  4 12:50 stderr.txt
[2026-02-04 12:50:46] HITS file was successfully produced:
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas 189701913 Feb  4 12:48 shared/HITS.pool.root.1
[2026-02-04 12:50:46]  *** Contents of shared directory: ***
[2026-02-04 12:50:46] total 669336
[2026-02-04 12:50:46] -rw-r--r--. 2 boincer umatlas 491899758 Feb  4 07:07 ATLAS.root_0
[2026-02-04 12:50:46] -rw-r--r--. 2 boincer umatlas    597759 Feb  4 07:07 input.tar.gz
[2026-02-04 12:50:46] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 07:07 start_atlas.sh
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas 189701913 Feb  4 12:48 HITS.pool.root.1
[2026-02-04 12:50:46] -rw-------. 1 boincer umatlas   3174400 Feb  4 12:50 result.tar.gz
12:51:07 (2632778): run_atlas exited; CPU time 50496.333657
12:51:07 (2632778): called boinc_finish(0)

</stderr_txt>
]]>

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