Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:52:31 (1402859): wrapper (7.7.26015): starting
06:52:31 (1402859): wrapper: running run_atlas (--nthreads 6)
[2026-02-05 06:52:31] Arguments: --nthreads 6
[2026-02-05 06:52:31] Threads: 6
[2026-02-05 06:52:31] Checking for CVMFS
[2026-02-05 06:52:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 06:53:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 06:53:43] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 06:53:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 06:53:44] 2.13.3.0 1403079 1 29448 155878 3 1 49970293 52428800 0 130560 0 0 0.000 1338 62 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-05 06:53:44] CVMFS is ok
[2026-02-05 06:53:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 06:53:44] Checking for apptainer binary...
[2026-02-05 06:53:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 06:53:44] Running /usr/bin/apptainer --version
[2026-02-05 06:53:44] apptainer version 1.4.5-2.el9
[2026-02-05 06:53:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 06:53:44] testio008
[2026-02-05 06:53:44] apptainer works
[2026-02-05 06:53:44] Set ATHENA_PROC_NUMBER=6
[2026-02-05 06:53:44] Set ATHENA_CORE_NUMBER=6
[2026-02-05 06:53:44] Starting ATLAS job with PandaID=7000586039
[2026-02-05 06:53:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 08:10:29]  *** The last 200 lines of the pilot log: ***
[2026-02-05 08:10:29]  is_altstaged=None
[2026-02-05 08:10:29]  is_tar=False
[2026-02-05 08:10:29]  lfn=log.48317952._012191.job.log.tgz.1
[2026-02-05 08:10:29]  mtime=0
[2026-02-05 08:10:29]  protocol_id=None
[2026-02-05 08:10:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-05 08:10:29]  replicas=None
[2026-02-05 08:10:29]  scope=mc23_13p6TeV
[2026-02-05 08:10:29]  status=None
[2026-02-05 08:10:29]  status_code=0
[2026-02-05 08:10:29]  storage_token=
[2026-02-05 08:10:29]  surl=/var/lib/boinc/slots/5/PanDA_Pilot-7000586039/log.48317952._012191.job.log.tgz.1
[2026-02-05 08:10:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/de/log.48317952._012191.job.log.tgz.1
[2026-02-05 08:10:29]  workdir=None
[2026-02-05 08:10:29] ]
[2026-02-05 08:10:29] 2026-02-04 23:09:51,335 | INFO     | time since job start (4474s) is within the limit (349056.0s)
[2026-02-05 08:10:29] 2026-02-04 23:09:51,344 | INFO     | transferring file log.48317952._012191.job.log.tgz.1 from /var/lib/boinc/slots/5/PanDA_Pilot-7000586039/log.48317952._012191.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-05 08:10:29] 2026-02-04 23:09:51,345 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-7000586039/log.48317952._012191.job.log.tgz.1 /var/lib/boinc/slots/5/log.48317952._012191.job
[2026-02-05 08:10:29] 2026-02-04 23:09:51,352 | INFO     | adding to output.list: log.48317952._012191.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/64/de/log.48317952._012191.job.log.tg
[2026-02-05 08:10:29] 2026-02-04 23:09:51,352 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-05 08:10:29] 2026-02-04 23:09:51,353 | INFO     | summary of transferred files:
[2026-02-05 08:10:29] 2026-02-04 23:09:51,353 | INFO     |  -- lfn=log.48317952._012191.job.log.tgz.1, status_code=0, status=transferred
[2026-02-05 08:10:29] 2026-02-04 23:09:51,353 | INFO     | stage-out finished correctly
[2026-02-05 08:10:29] 2026-02-04 23:09:51,600 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-05 08:10:29] 2026-02-04 23:09:53,349 | INFO     | time since job start (4476s) is within the limit (349056.0s)
[2026-02-05 08:10:29] 2026-02-04 23:09:54,371 | INFO     | job 7000586039 has state=finished
[2026-02-05 08:10:29] 2026-02-04 23:09:54,371 | INFO     | preparing for final server update for job 7000586039 in state='finished'
[2026-02-05 08:10:29] 2026-02-04 23:09:55,321 | WARNING  | process 1411943 can no longer be monitored (due to stat problems) - aborting
[2026-02-05 08:10:29] 2026-02-04 23:09:55,321 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7000586039/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,354 | INFO     | time since job start (4478s) is within the limit (349056.0s)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,385 | INFO     | number of running child processes to parent process 1411943: 1
[2026-02-05 08:10:29] 2026-02-04 23:09:55,385 | INFO     | maximum number of monitored processes: 6
[2026-02-05 08:10:29] 2026-02-04 23:09:55,402 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,402 | INFO     | reading metadata from: /var/lib/boinc/slots/5/PanDA_Pilot-7000586039/jobReport.json
[2026-02-05 08:10:29] 2026-02-04 23:09:55,404 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/5/workernode_map.json
[2026-02-05 08:10:29] 2026-02-04 23:09:55,404 | INFO     | this job has now completed (state=finished)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,404 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,404 | INFO     | log transfer has been attempted: DONE
[2026-02-05 08:10:29] 2026-02-04 23:09:55,404 | INFO     | job 7000586039 has finished - writing final server update
[2026-02-05 08:10:29] 2026-02-04 23:09:55,405 | INFO     | total number of processed events: 400 (read)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,408 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-7000586039/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,408 | INFO     | extracted standard info from prmon json
[2026-02-05 08:10:29] 2026-02-04 23:09:55,408 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 08:10:29] 2026-02-04 23:09:55,408 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 08:10:29] 2026-02-04 23:09:55,408 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 08:10:29] 2026-02-04 23:09:55,408 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 08:10:29] 2026-02-04 23:09:55,410 | INFO     | fitting pss+swap vs Time
[2026-02-05 08:10:29] 2026-02-04 23:09:55,410 | INFO     | sum of square deviations: 89127252.5
[2026-02-05 08:10:29] 2026-02-04 23:09:55,410 | INFO     | sum of deviations: -3620308764.000002
[2026-02-05 08:10:29] 2026-02-04 23:09:55,410 | INFO     | mean x: 1770244425.5
[2026-02-05 08:10:29] 2026-02-04 23:09:55,410 | INFO     | mean y: 2498329.696969697
[2026-02-05 08:10:29] 2026-02-04 23:09:55,410 | INFO     | intersect: 71909027795.07906
[2026-02-05 08:10:29] 2026-02-04 23:09:55,410 | INFO     | chi2: 0.028229123508384163
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | current memory leak: -40.62 B/s (using 66 data points, chi2=0.03)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | could have reported an average CPU frequency of 4263 MHz (6 samples)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | ..............................
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | . Timing measurements:
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | . get job = 0 s
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | . initial setup = 9 s
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | . payload setup = 6 s
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | . stage-in = 0 s
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | . payload execution = 4451 s
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | . stage-out = 0 s
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | . log creation = 0 s
[2026-02-05 08:10:29] 2026-02-04 23:09:55,411 | INFO     | ..............................
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | 
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | job summary report
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | --------------------------------------------------
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | PanDA job id: 7000586039
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | task id: 48317952
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | errors: (none)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | pilot state: finished 
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | transexitcode: 0
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | exeerrorcode: 0
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | exeerrordiag: 
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | exitcode: 0
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | exitmsg: OK
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | cpuconsumptiontime: 25171 s
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | nevents: 400
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | neventsw: 0
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | pid: 1411943
[2026-02-05 08:10:29] 2026-02-04 23:09:55,484 | INFO     | pgrp: 1411943
[2026-02-05 08:10:29] 2026-02-04 23:09:55,485 | INFO     | corecount: 6
[2026-02-05 08:10:29] 2026-02-04 23:09:55,485 | INFO     | event service: False
[2026-02-05 08:10:29] 2026-02-04 23:09:55,485 | INFO     | sizes: {0: 2278276, 10: 2278276, 4461: 2304491, 4463: 2313545, 4467: 2313683}
[2026-02-05 08:10:29] 2026-02-04 23:09:55,485 | INFO     | --------------------------------------------------
[2026-02-05 08:10:29] 2026-02-04 23:09:55,485 | INFO     | 
[2026-02-05 08:10:29] 2026-02-04 23:09:55,485 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | job 7000586039 has completed (purged errors)
[2026-02-05 08:10:29] 2026-02-04 23:09:55,499 | INFO     | overall cleanup function is called
[2026-02-05 08:10:29] 2026-02-04 23:09:56,506 | INFO     | --- collectZombieJob: --- 10, [1411943]
[2026-02-05 08:10:29] 2026-02-04 23:09:56,506 | INFO     | zombie collector waiting for pid 1411943
[2026-02-05 08:10:29] 2026-02-04 23:09:56,506 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 08:10:29] 2026-02-04 23:09:56,506 | INFO     | collected zombie processes
[2026-02-05 08:10:29] 2026-02-04 23:09:56,506 | INFO     | will attempt to kill all subprocesses of pid=1411943
[2026-02-05 08:10:29] 2026-02-04 23:09:56,568 | INFO     | process IDs to be killed: [1411943] (in reverse order)
[2026-02-05 08:10:29] 2026-02-04 23:09:56,598 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 08:10:29] 2026-02-04 23:09:56,598 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 08:10:29] 2026-02-04 23:09:56,601 | INFO     | did not find any defunct processes belonging to 1411943
[2026-02-05 08:10:29] 2026-02-04 23:09:56,604 | INFO     | did not find any defunct processes belonging to 1411943
[2026-02-05 08:10:29] 2026-02-04 23:09:56,604 | INFO     | ready for new job
[2026-02-05 08:10:29] 2026-02-04 23:09:56,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 08:10:29] 2026-02-04 23:09:56,605 | INFO     | **************************************
[2026-02-05 08:10:29] 2026-02-04 23:09:56,606 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 08:10:29] 2026-02-04 23:09:56,606 | INFO     | **************************************
[2026-02-05 08:10:29] 2026-02-04 23:09:56,606 | INFO     | 
[2026-02-05 08:10:29] 2026-02-04 23:09:56,607 | INFO     | architecture information:
[2026-02-05 08:10:29] 2026-02-04 23:09:56,607 | INFO     | executing command: cat /etc/os-release
[2026-02-05 08:10:29] 2026-02-04 23:09:56,617 | INFO     | cat /etc/os-release:
[2026-02-05 08:10:29] NAME="CentOS Linux"
[2026-02-05 08:10:29] VERSION="7 (Core)"
[2026-02-05 08:10:29] ID="centos"
[2026-02-05 08:10:29] ID_LIKE="rhel fedora"
[2026-02-05 08:10:29] VERSION_ID="7"
[2026-02-05 08:10:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 08:10:29] ANSI_COLOR="0;31"
[2026-02-05 08:10:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 08:10:29] HOME_URL="https://www.centos.org/"
[2026-02-05 08:10:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 08:10:29] 
[2026-02-05 08:10:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 08:10:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 08:10:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 08:10:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 08:10:29] 
[2026-02-05 08:10:29] 2026-02-04 23:09:56,618 | INFO     | **************************************
[2026-02-05 08:10:29] 2026-02-04 23:09:57,120 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2026-02-05 08:10:29] 2026-02-04 23:09:57,130 | INFO     | sufficient remaining disk space (279791534080 B)
[2026-02-05 08:10:29] 2026-02-04 23:09:57,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 08:10:29] 2026-02-04 23:09:57,130 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 08:10:29] 2026-02-04 23:09:57,130 | INFO     | update_server=False
[2026-02-05 08:10:29] 2026-02-04 23:09:57,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 08:10:29] 2026-02-04 23:09:57,131 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 08:10:29] 2026-02-04 23:09:57,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 08:10:29] 2026-02-04 23:09:57,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 08:10:29] 2026-02-04 23:09:57,131 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-02-05 08:10:29] 2026-02-04 23:09:57,131 | INFO     | aborting loop
[2026-02-05 08:10:29] 2026-02-04 23:09:57,132 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 08:10:29] 2026-02-04 23:09:57,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 08:10:29] 2026-02-04 23:09:57,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 08:10:29] 2026-02-04 23:09:57,213 | INFO     | all job control threads have been joined
[2026-02-05 08:10:29] 2026-02-04 23:09:57,645 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 08:10:29] 2026-02-04 23:09:57,916 | INFO     | all data control threads have been joined
[2026-02-05 08:10:29] 2026-02-04 23:09:58,135 | INFO     | [job] retrieve thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:58,136 | INFO     | [job] queue monitor thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:58,137 | INFO     | [job] job monitor thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:58,217 | INFO     | [job] control thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:58,433 | INFO     | all payload control threads have been joined
[2026-02-05 08:10:29] 2026-02-04 23:09:58,599 | INFO     | [payload] validate_post thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:58,742 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:58,839 | INFO     | [job] validate thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:58,921 | INFO     | [data] control thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:58,973 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:59,136 | INFO     | [data] copytool_out thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:59,316 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:59,438 | INFO     | [payload] control thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:59,463 | INFO     | [data] copytool_in thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:59,529 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:09:59,630 | INFO     | [payload] failed_post thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:10:01,650 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 08:10:29] 2026-02-04 23:10:08,155 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-02-05 08:10:29] 2026-02-04 23:10:24,711 | INFO     | [monitor] cgroup control has ended
[2026-02-05 08:10:29] 2026-02-04 23:10:24,779 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140709251331904)>', '<ExcThread(monitor, started 140708891584256)>']
[2026-02-05 08:10:29] 2026-02-04 23:10:25,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 08:10:29] 2026-02-04 23:10:25,270 | INFO     | [monitor] control thread has ended
[2026-02-05 08:10:29] 2026-02-04 23:10:29,804 | INFO     | all workflow threads have been joined
[2026-02-05 08:10:29] 2026-02-04 23:10:29,804 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 08:10:29] 2026-02-04 23:10:29,804 | INFO     | traces error code: 0
[2026-02-05 08:10:29] 2026-02-04 23:10:29,804 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 08:10:29] 2026-02-04 23:10:29,889 [wrapper] ==== pilot stdout END ====
[2026-02-05 08:10:29] 2026-02-04 23:10:29,891 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 08:10:29] 2026-02-04 23:10:29,893 [wrapper] pilotpid: 1407299
[2026-02-05 08:10:29] 2026-02-04 23:10:29,895 [wrapper] Pilot exit status: 0
[2026-02-05 08:10:29] 2026-02-04 23:10:29,902 [wrapper] pandaids: 7000586039
[2026-02-05 08:10:29] 2026-02-04 23:10:29,921 [wrapper] cleanup supervisor_pilot 1430064 1407300
[2026-02-05 08:10:29] 2026-02-04 23:10:29,924 [wrapper] Test setup, not cleaning
[2026-02-05 08:10:29] 2026-02-04 23:10:29,926 [wrapper] apfmon messages muted
[2026-02-05 08:10:29] 2026-02-04 23:10:29,928 [wrapper] ==== wrapper stdout END ====
[2026-02-05 08:10:29] 2026-02-04 23:10:29,929 [wrapper] ==== wrapper stderr END ====
[2026-02-05 08:10:29]  *** Error codes and diagnostics ***
[2026-02-05 08:10:29]     "exeErrorCode": 0,
[2026-02-05 08:10:29]     "exeErrorDiag": "",
[2026-02-05 08:10:29]     "pilotErrorCode": 0,
[2026-02-05 08:10:29]     "pilotErrorDiag": "",
[2026-02-05 08:10:29]  *** Listing of results directory ***
[2026-02-05 08:10:29] total 661100
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc    584422 Feb  4 10:26 pilot3.tar.gz
[2026-02-05 08:10:29] -rwx------. 1 boinc boinc     36322 Feb  4 10:28 runpilot2-wrapper.sh
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc      5111 Feb  4 10:29 queuedata.json
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc       100 Feb  5 06:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 08:10:29] -rwxr-xr-x. 1 boinc boinc      7986 Feb  5 06:52 run_atlas
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc       105 Feb  5 06:52 job.xml
[2026-02-05 08:10:29] -rw-r--r--. 2 boinc boinc 490426279 Feb  5 06:52 EVNT.48317949._000230.pool.root.1
[2026-02-05 08:10:29] drwxrwx--x. 2 boinc boinc        68 Feb  5 06:52 shared
[2026-02-05 08:10:29] -rw-r--r--. 2 boinc boinc    597758 Feb  5 06:52 input.tar.gz
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc      9526 Feb  5 06:52 init_data.xml
[2026-02-05 08:10:29] -rw-r--r--. 2 boinc boinc     15845 Feb  5 06:52 start_atlas.sh
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc         0 Feb  5 06:52 boinc_lockfile
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc      2524 Feb  5 06:53 pandaJob.out
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc   1009560 Feb  5 06:55 agis_schedconf.cvmfs.json
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc   1511668 Feb  5 06:55 agis_ddmendpoints.agis.ALL.json
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc       424 Feb  5 06:55 workernode_map.json
[2026-02-05 08:10:29] drwx------. 5 boinc boinc      4096 Feb  5 06:55 pilot3
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc 180636963 Feb  5 08:09 HITS.48317952._012191.pool.root.1
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc       530 Feb  5 08:09 boinc_task_state.xml
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc        95 Feb  5 08:09 pilot_heartbeat.json
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc      1010 Feb  5 08:09 memory_monitor_summary.json
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc    314746 Feb  5 08:09 log.48317952._012191.job.log.tgz.1
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc      6304 Feb  5 08:09 heartbeat.json
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc      8192 Feb  5 08:10 boinc_mmap_file
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc        27 Feb  5 08:10 wrapper_checkpoint.txt
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc      4549 Feb  5 08:10 pilotlog.txt
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc    671785 Feb  5 08:10 log.48317952._012191.job.log.1
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc       357 Feb  5 08:10 output.list
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc       620 Feb  5 08:10 runtime_log
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc   1003520 Feb  5 08:10 result.tar.gz
[2026-02-05 08:10:29] -rw-------. 1 boinc boinc       642 Feb  5 08:10 SwoMDm6rg78n9Rq4apOajLDm4fhM0noT9bVooX4SDmnxVKDm4fK5xn.diag
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc      8774 Feb  5 08:10 runtime_log.err
[2026-02-05 08:10:29] -rw-r--r--. 1 boinc boinc     21079 Feb  5 08:10 stderr.txt
[2026-02-05 08:10:29] HITS file was successfully produced:
[2026-02-05 08:10:30] -rw-------. 1 boinc boinc 180636963 Feb  5 08:09 shared/HITS.pool.root.1
[2026-02-05 08:10:30]  *** Contents of shared directory: ***
[2026-02-05 08:10:30] total 656916
[2026-02-05 08:10:30] -rw-r--r--. 2 boinc boinc 490426279 Feb  5 06:52 ATLAS.root_0
[2026-02-05 08:10:30] -rw-r--r--. 2 boinc boinc    597758 Feb  5 06:52 input.tar.gz
[2026-02-05 08:10:30] -rw-r--r--. 2 boinc boinc     15845 Feb  5 06:52 start_atlas.sh
[2026-02-05 08:10:30] -rw-------. 1 boinc boinc 180636963 Feb  5 08:09 HITS.pool.root.1
[2026-02-05 08:10:30] -rw-------. 1 boinc boinc   1003520 Feb  5 08:10 result.tar.gz
08:10:31 (1402859): run_atlas exited; CPU time 25203.343594
08:10:31 (1402859): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN