Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:42:10 (1473624): wrapper (7.7.26015): starting
20:42:10 (1473624): wrapper: running run_atlas (--nthreads 6)
[2026-02-05 20:42:10] Arguments: --nthreads 6
[2026-02-05 20:42:10] Threads: 6
[2026-02-05 20:42:10] Checking for CVMFS
[2026-02-05 20:42:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 20:43:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 20:43:05] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 20:43:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 20:43:06] 2.13.3.0 1473844 0 29504 155903 3 1 50041856 52428801 0 130560 0 0 0.000 1338 56 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-05 20:43:06] CVMFS is ok
[2026-02-05 20:43:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 20:43:06] Checking for apptainer binary...
[2026-02-05 20:43:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 20:43:06] Running /usr/bin/apptainer --version
[2026-02-05 20:43:06] apptainer version 1.4.5-2.el9
[2026-02-05 20:43:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 20:43:06] testio008
[2026-02-05 20:43:06] apptainer works
[2026-02-05 20:43:07] Set ATHENA_PROC_NUMBER=6
[2026-02-05 20:43:07] Set ATHENA_CORE_NUMBER=6
[2026-02-05 20:43:07] Starting ATLAS job with PandaID=6995304148
[2026-02-05 20:43:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 22:00:23]  *** The last 200 lines of the pilot log: ***
[2026-02-05 22:00:23]  is_altstaged=None
[2026-02-05 22:00:23]  is_tar=False
[2026-02-05 22:00:23]  lfn=log.48318034._007971.job.log.tgz.1
[2026-02-05 22:00:23]  mtime=0
[2026-02-05 22:00:23]  protocol_id=None
[2026-02-05 22:00:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-05 22:00:23]  replicas=None
[2026-02-05 22:00:23]  scope=mc23_13p6TeV
[2026-02-05 22:00:23]  status=None
[2026-02-05 22:00:23]  status_code=0
[2026-02-05 22:00:23]  storage_token=
[2026-02-05 22:00:23]  surl=/var/lib/boinc/slots/7/PanDA_Pilot-6995304148/log.48318034._007971.job.log.tgz.1
[2026-02-05 22:00:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/db/log.48318034._007971.job.log.tgz.1
[2026-02-05 22:00:23]  workdir=None
[2026-02-05 22:00:23] ]
[2026-02-05 22:00:23] 2026-02-05 12:59:23,178 | INFO     | transferring file log.48318034._007971.job.log.tgz.1 from /var/lib/boinc/slots/7/PanDA_Pilot-6995304148/log.48318034._007971.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-02-05 22:00:23] 2026-02-05 12:59:23,178 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/7/PanDA_Pilot-6995304148/log.48318034._007971.job.log.tgz.1 /var/lib/boinc/slots/7/log.48318034._007971.job
[2026-02-05 22:00:23] 2026-02-05 12:59:23,190 | INFO     | adding to output.list: log.48318034._007971.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/1d/db/log.48318034._007971.job.log.tg
[2026-02-05 22:00:23] 2026-02-05 12:59:23,191 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-05 22:00:23] 2026-02-05 12:59:23,191 | INFO     | summary of transferred files:
[2026-02-05 22:00:23] 2026-02-05 12:59:23,191 | INFO     |  -- lfn=log.48318034._007971.job.log.tgz.1, status_code=0, status=transferred
[2026-02-05 22:00:23] 2026-02-05 12:59:23,191 | INFO     | stage-out finished correctly
[2026-02-05 22:00:23] 2026-02-05 12:59:23,260 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-05 22:00:23] 2026-02-05 12:59:24,558 | INFO     | time since job start (4454s) is within the limit (349056.0s)
[2026-02-05 22:00:23] 2026-02-05 12:59:24,658 | INFO     | job 6995304148 has state=finished
[2026-02-05 22:00:23] 2026-02-05 12:59:24,658 | INFO     | preparing for final server update for job 6995304148 in state='finished'
[2026-02-05 22:00:23] 2026-02-05 12:59:24,658 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-6995304148/jobReport.json
[2026-02-05 22:00:23] 2026-02-05 12:59:24,660 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-02-05 22:00:23] 2026-02-05 12:59:24,660 | INFO     | this job has now completed (state=finished)
[2026-02-05 22:00:23] 2026-02-05 12:59:24,660 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-05 22:00:23] 2026-02-05 12:59:24,660 | INFO     | log transfer has been attempted: DONE
[2026-02-05 22:00:23] 2026-02-05 12:59:24,660 | INFO     | job 6995304148 has finished - writing final server update
[2026-02-05 22:00:23] 2026-02-05 12:59:24,660 | INFO     | total number of processed events: 400 (read)
[2026-02-05 22:00:23] 2026-02-05 12:59:24,663 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6995304148/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 22:00:23] 2026-02-05 12:59:24,663 | INFO     | extracted standard info from prmon json
[2026-02-05 22:00:23] 2026-02-05 12:59:24,664 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 22:00:23] 2026-02-05 12:59:24,664 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 22:00:23] 2026-02-05 12:59:24,664 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 22:00:23] 2026-02-05 12:59:24,664 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 22:00:23] 2026-02-05 12:59:24,665 | INFO     | fitting pss+swap vs Time
[2026-02-05 22:00:23] 2026-02-05 12:59:24,665 | INFO     | sum of square deviations: 89119097.2727272
[2026-02-05 22:00:23] 2026-02-05 12:59:24,666 | INFO     | sum of deviations: -10688352217.363634
[2026-02-05 22:00:23] 2026-02-05 12:59:24,666 | INFO     | mean x: 1770294220.6363637
[2026-02-05 22:00:23] 2026-02-05 12:59:24,666 | INFO     | mean y: 2568641.6515151514
[2026-02-05 22:00:23] 2026-02-05 12:59:24,666 | INFO     | intersect: 212319891612.50696
[2026-02-05 22:00:23] 2026-02-05 12:59:24,666 | INFO     | chi2: 0.12710738654111253
[2026-02-05 22:00:23] 2026-02-05 12:59:24,666 | INFO     | current memory leak: -119.93 B/s (using 66 data points, chi2=0.13)
[2026-02-05 22:00:23] 2026-02-05 12:59:24,666 | INFO     | could have reported an average CPU frequency of 4267 MHz (6 samples)
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | ..............................
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | . Timing measurements:
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | . get job = 0 s
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | . initial setup = 11 s
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | . payload setup = 7 s
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | . stage-in = 0 s
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | . payload execution = 4430 s
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | . stage-out = 0 s
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | . log creation = 0 s
[2026-02-05 22:00:23] 2026-02-05 12:59:24,667 | INFO     | ..............................
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | 
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | job summary report
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | --------------------------------------------------
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | PanDA job id: 6995304148
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | task id: 48318034
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | errors: (none)
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | pilot state: finished 
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | transexitcode: 0
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | exeerrorcode: 0
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | exeerrordiag: 
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | exitcode: 0
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | exitmsg: OK
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | cpuconsumptiontime: 24510 s
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | nevents: 400
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | neventsw: 0
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | pid: 1482698
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | pgrp: 1482698
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | corecount: 6
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | event service: False
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | sizes: {0: 2283000, 11: 2283000, 4441: 2309068, 4442: 2318122, 4444: 2318260}
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | --------------------------------------------------
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | 
[2026-02-05 22:00:23] 2026-02-05 12:59:25,046 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-02-05 22:00:23] 2026-02-05 12:59:25,054 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,054 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | job 6995304148 has completed (purged errors)
[2026-02-05 22:00:23] 2026-02-05 12:59:25,055 | INFO     | overall cleanup function is called
[2026-02-05 22:00:23] 2026-02-05 12:59:26,061 | INFO     | --- collectZombieJob: --- 10, [1482698]
[2026-02-05 22:00:23] 2026-02-05 12:59:26,061 | INFO     | zombie collector waiting for pid 1482698
[2026-02-05 22:00:23] 2026-02-05 12:59:26,061 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 22:00:23] 2026-02-05 12:59:26,061 | INFO     | collected zombie processes
[2026-02-05 22:00:23] 2026-02-05 12:59:26,061 | INFO     | will attempt to kill all subprocesses of pid=1482698
[2026-02-05 22:00:23] 2026-02-05 12:59:26,087 | INFO     | process IDs to be killed: [1482698] (in reverse order)
[2026-02-05 22:00:23] 2026-02-05 12:59:26,103 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 22:00:23] 2026-02-05 12:59:26,104 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 22:00:23] 2026-02-05 12:59:26,105 | INFO     | did not find any defunct processes belonging to 1482698
[2026-02-05 22:00:23] 2026-02-05 12:59:26,106 | INFO     | did not find any defunct processes belonging to 1482698
[2026-02-05 22:00:23] 2026-02-05 12:59:26,106 | INFO     | ready for new job
[2026-02-05 22:00:23] 2026-02-05 12:59:26,106 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 22:00:23] 2026-02-05 12:59:26,107 | INFO     | **************************************
[2026-02-05 22:00:23] 2026-02-05 12:59:26,107 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 22:00:23] 2026-02-05 12:59:26,107 | INFO     | **************************************
[2026-02-05 22:00:23] 2026-02-05 12:59:26,107 | INFO     | 
[2026-02-05 22:00:23] 2026-02-05 12:59:26,107 | INFO     | architecture information:
[2026-02-05 22:00:23] 2026-02-05 12:59:26,108 | INFO     | executing command: cat /etc/os-release
[2026-02-05 22:00:23] 2026-02-05 12:59:26,113 | INFO     | cat /etc/os-release:
[2026-02-05 22:00:23] NAME="CentOS Linux"
[2026-02-05 22:00:23] VERSION="7 (Core)"
[2026-02-05 22:00:23] ID="centos"
[2026-02-05 22:00:23] ID_LIKE="rhel fedora"
[2026-02-05 22:00:23] VERSION_ID="7"
[2026-02-05 22:00:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 22:00:23] ANSI_COLOR="0;31"
[2026-02-05 22:00:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 22:00:23] HOME_URL="https://www.centos.org/"
[2026-02-05 22:00:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 22:00:23] 
[2026-02-05 22:00:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 22:00:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 22:00:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 22:00:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 22:00:23] 
[2026-02-05 22:00:23] 2026-02-05 12:59:26,113 | INFO     | **************************************
[2026-02-05 22:00:23] 2026-02-05 12:59:26,616 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-02-05 22:00:23] 2026-02-05 12:59:26,622 | INFO     | sufficient remaining disk space (283220377600 B)
[2026-02-05 22:00:23] 2026-02-05 12:59:26,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 22:00:23] 2026-02-05 12:59:26,622 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 22:00:23] 2026-02-05 12:59:26,622 | INFO     | update_server=False
[2026-02-05 22:00:23] 2026-02-05 12:59:26,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 22:00:23] 2026-02-05 12:59:26,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 22:00:23] 2026-02-05 12:59:26,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 22:00:23] 2026-02-05 12:59:26,781 | INFO     | all job control threads have been joined
[2026-02-05 22:00:23] 2026-02-05 12:59:27,303 | INFO     | all data control threads have been joined
[2026-02-05 22:00:23] 2026-02-05 12:59:27,312 | INFO     | all payload control threads have been joined
[2026-02-05 22:00:23] 2026-02-05 12:59:27,342 | WARNING  | process 1482698 can no longer be monitored (due to stat problems) - aborting
[2026-02-05 22:00:23] 2026-02-05 12:59:27,364 | INFO     | using path: /var/lib/boinc/slots/7/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 22:00:23] 2026-02-05 12:59:27,391 | INFO     | number of running child processes to parent process 1482698: 1
[2026-02-05 22:00:23] 2026-02-05 12:59:27,391 | INFO     | maximum number of monitored processes: 6
[2026-02-05 22:00:23] 2026-02-05 12:59:27,391 | INFO     | aborting job monitoring since job object (job id=6995304148) has expired
[2026-02-05 22:00:23] 2026-02-05 12:59:27,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 22:00:23] 2026-02-05 12:59:27,391 | INFO     | will abort loop
[2026-02-05 22:00:23] 2026-02-05 12:59:27,627 | INFO     | [job] retrieve thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:27,628 | INFO     | [job] queue monitor thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:27,786 | INFO     | [job] control thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:27,835 | INFO     | [payload] failed_post thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:27,924 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:28,308 | INFO     | [data] control thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:28,317 | INFO     | [payload] control thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:28,396 | INFO     | [job] job monitor thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:28,398 | INFO     | [payload] validate_post thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:28,628 | INFO     | [data] copytool_out thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:28,864 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:28,957 | INFO     | [data] copytool_in thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:29,054 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:29,079 | INFO     | [job] validate thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:29,333 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 22:00:23] 2026-02-05 12:59:33,338 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:37,511 | INFO     | job.realtimelogging is not enabled
[2026-02-05 22:00:23] 2026-02-05 12:59:38,516 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 22:00:23] 2026-02-05 12:59:57,705 | INFO     | PID=1478048 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 22:00:23] 2026-02-05 12:59:57,705 | INFO     | .. there are 2 such processes running
[2026-02-05 22:00:23] 2026-02-05 12:59:57,706 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 22:00:23] 2026-02-05 12:59:57,706 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 22:00:23] 2026-02-05 12:59:57,706 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 22:00:23] 2026-02-05 12:59:58,085 [wrapper] supervise_pilot (15 min periods counter: 6)
[2026-02-05 22:00:23] 2026-02-05 13:00:17,277 | INFO     | [monitor] cgroup control has ended
[2026-02-05 22:00:23] 2026-02-05 13:00:18,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140343412631360)>', '<ExcThread(monitor, started 140343039203072)>']
[2026-02-05 22:00:23] 2026-02-05 13:00:18,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 22:00:23] 2026-02-05 13:00:18,811 | INFO     | [monitor] control thread has ended
[2026-02-05 22:00:23] 2026-02-05 13:00:23,014 | INFO     | all workflow threads have been joined
[2026-02-05 22:00:23] 2026-02-05 13:00:23,014 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 22:00:23] 2026-02-05 13:00:23,014 | INFO     | traces error code: 0
[2026-02-05 22:00:23] 2026-02-05 13:00:23,014 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 22:00:23] 2026-02-05 13:00:23,089 [wrapper] ==== pilot stdout END ====
[2026-02-05 22:00:23] 2026-02-05 13:00:23,093 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 22:00:23] 2026-02-05 13:00:23,095 [wrapper] pilotpid: 1478048
[2026-02-05 22:00:23] 2026-02-05 13:00:23,098 [wrapper] Pilot exit status: 0
[2026-02-05 22:00:23] 2026-02-05 13:00:23,102 [wrapper] pandaids: 6995304148
[2026-02-05 22:00:23] 2026-02-05 13:00:23,114 [wrapper] cleanup supervisor_pilot 1501204 1478049
[2026-02-05 22:00:23] 2026-02-05 13:00:23,117 [wrapper] Test setup, not cleaning
[2026-02-05 22:00:23] 2026-02-05 13:00:23,121 [wrapper] apfmon messages muted
[2026-02-05 22:00:23] 2026-02-05 13:00:23,124 [wrapper] ==== wrapper stdout END ====
[2026-02-05 22:00:23] 2026-02-05 13:00:23,127 [wrapper] ==== wrapper stderr END ====
[2026-02-05 22:00:23]  *** Error codes and diagnostics ***
[2026-02-05 22:00:23]     "exeErrorCode": 0,
[2026-02-05 22:00:23]     "exeErrorDiag": "",
[2026-02-05 22:00:23]     "pilotErrorCode": 0,
[2026-02-05 22:00:23]     "pilotErrorDiag": "",
[2026-02-05 22:00:23]  *** Listing of results directory ***
[2026-02-05 22:00:23] total 672408
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc    584422 Feb  4 12:08 pilot3.tar.gz
[2026-02-05 22:00:23] -rwx------. 1 boinc boinc     36322 Feb  4 12:09 runpilot2-wrapper.sh
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc      5111 Feb  4 12:09 queuedata.json
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc       100 Feb  5 20:42 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 22:00:23] -rwxr-xr-x. 1 boinc boinc      7986 Feb  5 20:42 run_atlas
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc       105 Feb  5 20:42 job.xml
[2026-02-05 22:00:23] -rw-r--r--. 2 boinc boinc 496984520 Feb  5 20:42 EVNT.48318032._000044.pool.root.1
[2026-02-05 22:00:23] -rw-r--r--. 2 boinc boinc     15845 Feb  5 20:42 start_atlas.sh
[2026-02-05 22:00:23] drwxrwx--x. 2 boinc boinc        68 Feb  5 20:42 shared
[2026-02-05 22:00:23] -rw-r--r--. 2 boinc boinc    597767 Feb  5 20:42 input.tar.gz
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc      9526 Feb  5 20:42 init_data.xml
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc         0 Feb  5 20:42 boinc_lockfile
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc      2535 Feb  5 20:43 pandaJob.out
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc   1009524 Feb  5 20:45 agis_schedconf.cvmfs.json
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc   1513144 Feb  5 20:45 agis_ddmendpoints.agis.ALL.json
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc       416 Feb  5 20:45 workernode_map.json
[2026-02-05 22:00:23] drwx------. 5 boinc boinc      4096 Feb  5 20:45 pilot3
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc 185632383 Feb  5 21:59 HITS.48318034._007971.pool.root.1
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc       530 Feb  5 21:59 boinc_task_state.xml
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc      1012 Feb  5 21:59 memory_monitor_summary.json
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc    332326 Feb  5 21:59 log.48318034._007971.job.log.tgz.1
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc      6305 Feb  5 21:59 heartbeat.json
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc        95 Feb  5 21:59 pilot_heartbeat.json
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc        27 Feb  5 22:00 wrapper_checkpoint.txt
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc      8192 Feb  5 22:00 boinc_mmap_file
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc      5413 Feb  5 22:00 pilotlog.txt
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc    661801 Feb  5 22:00 log.48318034._007971.job.log.1
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc       357 Feb  5 22:00 output.list
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc       620 Feb  5 22:00 runtime_log
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc   1013760 Feb  5 22:00 result.tar.gz
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc       642 Feb  5 22:00 TfPKDmfRi78n9Rq4apOajLDm4fhM0noT9bVooX4SDmQBWKDmKjFLHn.diag
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc      8774 Feb  5 22:00 runtime_log.err
[2026-02-05 22:00:23] -rw-r--r--. 1 boinc boinc     21114 Feb  5 22:00 stderr.txt
[2026-02-05 22:00:23] HITS file was successfully produced:
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc 185632383 Feb  5 21:59 shared/HITS.pool.root.1
[2026-02-05 22:00:23]  *** Contents of shared directory: ***
[2026-02-05 22:00:23] total 668216
[2026-02-05 22:00:23] -rw-r--r--. 2 boinc boinc 496984520 Feb  5 20:42 ATLAS.root_0
[2026-02-05 22:00:23] -rw-r--r--. 2 boinc boinc     15845 Feb  5 20:42 start_atlas.sh
[2026-02-05 22:00:23] -rw-r--r--. 2 boinc boinc    597767 Feb  5 20:42 input.tar.gz
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc 185632383 Feb  5 21:59 HITS.pool.root.1
[2026-02-05 22:00:23] -rw-------. 1 boinc boinc   1013760 Feb  5 22:00 result.tar.gz
22:00:25 (1473624): run_atlas exited; CPU time 24543.210277
22:00:25 (1473624): called boinc_finish(0)

</stderr_txt>
]]>

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