Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:43:53 (182907): wrapper (7.7.26015): starting
14:43:53 (182907): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 14:43:53] Arguments: --nthreads 4
[2026-02-04 14:43:53] Threads: 4
[2026-02-04 14:43:53] Checking for CVMFS
[2026-02-04 14:43:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 14:43:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 14:43:53] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 14:43:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 14:43:54] 2.9.2.0 2991 921 79484 155866 0 188 24424354 36864001 0 130560 0 504649 99.986 30507 1094 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-04 14:43:54] CVMFS is ok
[2026-02-04 14:43:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 14:43:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 14:43:54] Further information can be found at the LHC@home message board.
[2026-02-04 14:43:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 14:43:54] Checking for apptainer binary...
[2026-02-04 14:43:54] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 14:43:54] Running /usr/bin/apptainer --version
[2026-02-04 14:43:54] apptainer version 1.4.1-1.1
[2026-02-04 14:43:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 14:43:54] atlasA215b
[2026-02-04 14:43:54] apptainer works
[2026-02-04 14:43:54] Set ATHENA_PROC_NUMBER=4
[2026-02-04 14:43:54] Set ATHENA_CORE_NUMBER=4
[2026-02-04 14:43:54] Starting ATLAS job with PandaID=6990822320
[2026-02-04 14:43:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 15:48:17]  *** The last 200 lines of the pilot log: ***
[2026-02-04 15:48:17]  guid=29f2c57e-d312-45cc-a441-6e8bf26bfb39
[2026-02-04 15:48:17]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-04 15:48:17]  is_altstaged=None
[2026-02-04 15:48:17]  is_tar=False
[2026-02-04 15:48:17]  lfn=log.48310589._001096.job.log.tgz.1
[2026-02-04 15:48:17]  mtime=0
[2026-02-04 15:48:17]  protocol_id=None
[2026-02-04 15:48:17]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 15:48:17]  replicas=None
[2026-02-04 15:48:17]  scope=mc23_13p6TeV
[2026-02-04 15:48:17]  status=None
[2026-02-04 15:48:17]  status_code=0
[2026-02-04 15:48:17]  storage_token=
[2026-02-04 15:48:17]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6990822320/log.48310589._001096.job.log.tgz.1
[2026-02-04 15:48:17]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/b7/log.48310589._001096.job.log.tgz.1
[2026-02-04 15:48:17]  workdir=None
[2026-02-04 15:48:17] ]
[2026-02-04 15:48:17] 2026-02-04 14:47:30,703 | INFO     | transferring file log.48310589._001096.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6990822320/log.48310589._001096.job.log.tgz.1 to /local/data/boinc/
[2026-02-04 15:48:17] 2026-02-04 14:47:30,704 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6990822320/log.48310589._001096.job.log.tgz.1 /local/data/boinc/slots/0/log.48310589._0010
[2026-02-04 15:48:17] 2026-02-04 14:47:30,723 | INFO     | adding to output.list: log.48310589._001096.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c2/b7/log.48310589._001096.job.log.tg
[2026-02-04 15:48:17] 2026-02-04 14:47:30,723 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 15:48:17] 2026-02-04 14:47:30,723 | INFO     | summary of transferred files:
[2026-02-04 15:48:17] 2026-02-04 14:47:30,723 | INFO     |  -- lfn=log.48310589._001096.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 15:48:17] 2026-02-04 14:47:30,723 | INFO     | stage-out finished correctly
[2026-02-04 15:48:17] 2026-02-04 14:47:30,954 | INFO     | time since job start (3804s) is within the limit (349056.0s)
[2026-02-04 15:48:17] 2026-02-04 14:47:32,960 | INFO     | time since job start (3806s) is within the limit (349056.0s)
[2026-02-04 15:48:17] 2026-02-04 14:47:33,802 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 15:48:17] 2026-02-04 14:47:33,878 | WARNING  | process 191516 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 15:48:17] 2026-02-04 14:47:33,878 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6990822320/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 15:48:17] 2026-02-04 14:47:33,916 | INFO     | number of running child processes to parent process 191516: 1
[2026-02-04 15:48:17] 2026-02-04 14:47:33,916 | INFO     | maximum number of monitored processes: 6
[2026-02-04 15:48:17] 2026-02-04 14:47:34,181 | INFO     | job 6990822320 has state=finished
[2026-02-04 15:48:17] 2026-02-04 14:47:34,181 | INFO     | preparing for final server update for job 6990822320 in state='finished'
[2026-02-04 15:48:17] 2026-02-04 14:47:34,781 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,782 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6990822320/jobReport.json
[2026-02-04 15:48:17] 2026-02-04 14:47:34,783 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-02-04 15:48:17] 2026-02-04 14:47:34,783 | INFO     | this job has now completed (state=finished)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,783 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,783 | INFO     | log transfer has been attempted: DONE
[2026-02-04 15:48:17] 2026-02-04 14:47:34,783 | INFO     | job 6990822320 has finished - writing final server update
[2026-02-04 15:48:17] 2026-02-04 14:47:34,783 | INFO     | total number of processed events: 400 (read)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,785 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6990822320/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,785 | INFO     | extracted standard info from prmon json
[2026-02-04 15:48:17] 2026-02-04 14:47:34,786 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 15:48:17] 2026-02-04 14:47:34,786 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 15:48:17] 2026-02-04 14:47:34,786 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 15:48:17] 2026-02-04 14:47:34,786 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 15:48:17] 2026-02-04 14:47:34,786 | INFO     | fitting pss+swap vs Time
[2026-02-04 15:48:17] 2026-02-04 14:47:34,786 | INFO     | sum of square deviations: 51573060.0
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | sum of deviations: -1711032737.0
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | mean x: 1770214618.0
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | mean y: 2651643.672727273
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | intersect: 58732832922.696106
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | chi2: 0.012244547170655696
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | current memory leak: -33.18 B/s (using 55 data points, chi2=0.01)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | could have reported an average CPU frequency of 3800 MHz (6 samples)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | ..............................
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | . Timing measurements:
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | . get job = 0 s
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | . initial setup = 4 s
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | . payload setup = 4 s
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | . stage-in = 0 s
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | . payload execution = 3785 s
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | . stage-out = 0 s
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | . log creation = 0 s
[2026-02-04 15:48:17] 2026-02-04 14:47:34,787 | INFO     | ..............................
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | 
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | job summary report
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | --------------------------------------------------
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | PanDA job id: 6990822320
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | task id: 48310589
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | errors: (none)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | pilot state: finished 
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | transexitcode: 0
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | exeerrorcode: 0
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | exeerrordiag: 
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | exitcode: 0
[2026-02-04 15:48:17] 2026-02-04 14:47:34,823 | INFO     | exitmsg: OK
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | cpuconsumptiontime: 14246 s
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | nevents: 400
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | neventsw: 0
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | pid: 191516
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | pgrp: 191516
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | corecount: 4
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | event service: False
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | sizes: {0: 2277188, 1: 2278309, 11: 2278309, 3793: 2304256, 3794: 2313260, 3797: 2313316, 3798: 2313638}
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | --------------------------------------------------
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | 
[2026-02-04 15:48:17] 2026-02-04 14:47:34,824 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 15:48:17] 2026-02-04 14:47:34,843 | INFO     | job 6990822320 has completed (purged errors)
[2026-02-04 15:48:17] 2026-02-04 14:47:34,844 | INFO     | overall cleanup function is called
[2026-02-04 15:48:17] 2026-02-04 14:47:35,851 | INFO     | --- collectZombieJob: --- 10, [191516]
[2026-02-04 15:48:17] 2026-02-04 14:47:35,851 | INFO     | zombie collector waiting for pid 191516
[2026-02-04 15:48:17] 2026-02-04 14:47:35,851 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 15:48:17] 2026-02-04 14:47:35,851 | INFO     | collected zombie processes
[2026-02-04 15:48:17] 2026-02-04 14:47:35,851 | INFO     | will attempt to kill all subprocesses of pid=191516
[2026-02-04 15:48:17] 2026-02-04 14:47:35,893 | INFO     | process IDs to be killed: [191516] (in reverse order)
[2026-02-04 15:48:17] 2026-02-04 14:47:35,926 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 15:48:17] 2026-02-04 14:47:35,926 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 15:48:17] 2026-02-04 14:47:35,928 | INFO     | did not find any defunct processes belonging to 191516
[2026-02-04 15:48:17] 2026-02-04 14:47:35,929 | INFO     | did not find any defunct processes belonging to 191516
[2026-02-04 15:48:17] 2026-02-04 14:47:35,929 | INFO     | ready for new job
[2026-02-04 15:48:17] 2026-02-04 14:47:35,929 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 15:48:17] 2026-02-04 14:47:35,930 | INFO     | **************************************
[2026-02-04 15:48:17] 2026-02-04 14:47:35,930 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 15:48:17] 2026-02-04 14:47:35,930 | INFO     | **************************************
[2026-02-04 15:48:17] 2026-02-04 14:47:35,930 | INFO     | 
[2026-02-04 15:48:17] 2026-02-04 14:47:35,930 | INFO     | architecture information:
[2026-02-04 15:48:17] 2026-02-04 14:47:35,930 | INFO     | executing command: cat /etc/os-release
[2026-02-04 15:48:17] 2026-02-04 14:47:35,945 | INFO     | cat /etc/os-release:
[2026-02-04 15:48:17] NAME="CentOS Linux"
[2026-02-04 15:48:17] VERSION="7 (Core)"
[2026-02-04 15:48:17] ID="centos"
[2026-02-04 15:48:17] ID_LIKE="rhel fedora"
[2026-02-04 15:48:17] VERSION_ID="7"
[2026-02-04 15:48:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 15:48:17] ANSI_COLOR="0;31"
[2026-02-04 15:48:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 15:48:17] HOME_URL="https://www.centos.org/"
[2026-02-04 15:48:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 15:48:17] 
[2026-02-04 15:48:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 15:48:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 15:48:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 15:48:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 15:48:17] 
[2026-02-04 15:48:17] 2026-02-04 14:47:35,945 | INFO     | **************************************
[2026-02-04 15:48:17] 2026-02-04 14:47:36,448 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-04 15:48:17] 2026-02-04 14:47:36,466 | INFO     | sufficient remaining disk space (336243720192 B)
[2026-02-04 15:48:17] 2026-02-04 14:47:36,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 15:48:17] 2026-02-04 14:47:36,467 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 15:48:17] 2026-02-04 14:47:36,467 | INFO     | update_server=False
[2026-02-04 15:48:17] 2026-02-04 14:47:36,467 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 15:48:17] 2026-02-04 14:47:36,467 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 15:48:17] 2026-02-04 14:47:36,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:48:17] 2026-02-04 14:47:36,525 | INFO     | all data control threads have been joined
[2026-02-04 15:48:17] 2026-02-04 14:47:36,934 | INFO     | all payload control threads have been joined
[2026-02-04 15:48:17] 2026-02-04 14:47:37,181 | INFO     | all job control threads have been joined
[2026-02-04 15:48:17] 2026-02-04 14:47:37,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:48:17] 2026-02-04 14:47:37,425 | INFO     | aborting loop
[2026-02-04 15:48:17] 2026-02-04 14:47:37,472 | INFO     | [job] retrieve thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:37,473 | INFO     | [job] queue monitor thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:37,507 | INFO     | [data] copytool_in thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:37,531 | INFO     | [data] control thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:37,640 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:37,795 | INFO     | [payload] validate_post thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:37,940 | INFO     | [payload] control thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:38,154 | INFO     | [payload] failed_post thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:38,186 | INFO     | [job] control thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:38,431 | INFO     | [job] job monitor thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:38,473 | INFO     | [data] copytool_out thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:38,701 | INFO     | [job] validate thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:38,807 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:38,863 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:38,888 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:47:39,847 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 15:48:17] 2026-02-04 14:47:43,854 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 15:48:17] 2026-02-04 14:48:06,090 | INFO     | PID=187019 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 15:48:17] 2026-02-04 14:48:06,090 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 15:48:17] 2026-02-04 14:48:06,090 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 15:48:17] 2026-02-04 14:48:06,090 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 15:48:17] 2026-02-04 14:48:10,884 | INFO     | [monitor] cgroup control has ended
[2026-02-04 15:48:17] 2026-02-04 14:48:12,078 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139938874910528)>', '<ExcThread(monitor, started 139937852667648)>']
[2026-02-04 15:48:17] 2026-02-04 14:48:12,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 15:48:17] 2026-02-04 14:48:12,123 | INFO     | [monitor] control thread has ended
[2026-02-04 15:48:17] 2026-02-04 14:48:17,104 | INFO     | all workflow threads have been joined
[2026-02-04 15:48:17] 2026-02-04 14:48:17,104 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 15:48:17] 2026-02-04 14:48:17,105 | INFO     | traces error code: 0
[2026-02-04 15:48:17] 2026-02-04 14:48:17,105 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 15:48:17] 2026-02-04 14:48:17,183 [wrapper] ==== pilot stdout END ====
[2026-02-04 15:48:17] 2026-02-04 14:48:17,187 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 15:48:17] 2026-02-04 14:48:17,191 [wrapper] pilotpid: 187019
[2026-02-04 15:48:17] 2026-02-04 14:48:17,195 [wrapper] Pilot exit status: 0
[2026-02-04 15:48:17] 2026-02-04 14:48:17,208 [wrapper] pandaids: 6990822320
[2026-02-04 15:48:17] 2026-02-04 14:48:17,231 [wrapper] cleanup supervisor_pilot  196521 187020
[2026-02-04 15:48:17] 2026-02-04 14:48:17,234 [wrapper] Test setup, not cleaning
[2026-02-04 15:48:17] 2026-02-04 14:48:17,238 [wrapper] apfmon messages muted
[2026-02-04 15:48:17] 2026-02-04 14:48:17,242 [wrapper] ==== wrapper stdout END ====
[2026-02-04 15:48:17] 2026-02-04 14:48:17,246 [wrapper] ==== wrapper stderr END ====
[2026-02-04 15:48:17]  *** Error codes and diagnostics ***
[2026-02-04 15:48:17]     "exeErrorCode": 0,
[2026-02-04 15:48:17]     "exeErrorDiag": "",
[2026-02-04 15:48:17]     "pilotErrorCode": 0,
[2026-02-04 15:48:17]     "pilotErrorDiag": "",
[2026-02-04 15:48:17]  *** Listing of results directory ***
[2026-02-04 15:48:17] total 660392
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc    584422 Jan 29 09:50 pilot3.tar.gz
[2026-02-04 15:48:17] -rwx------ 1 boinc boinc     36322 Jan 29 09:53 runpilot2-wrapper.sh
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc      5111 Jan 29 09:56 queuedata.json
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc       100 Feb  4 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 15:48:17] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 14:43 run_atlas
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc       105 Feb  4 14:43 job.xml
[2026-02-04 15:48:17] -rw-r--r-- 2 boinc boinc 493320568 Feb  4 14:43 EVNT.48310585._000022.pool.root.1
[2026-02-04 15:48:17] -rw-r--r-- 2 boinc boinc    597752 Feb  4 14:43 input.tar.gz
[2026-02-04 15:48:17] -rw-r--r-- 2 boinc boinc     15845 Feb  4 14:43 start_atlas.sh
[2026-02-04 15:48:17] drwxrwx--x 2 boinc boinc      4096 Feb  4 14:43 shared
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc         0 Feb  4 14:43 boinc_setup_complete
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc      6372 Feb  4 14:43 init_data.xml
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc         0 Feb  4 14:43 boinc_lockfile
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc      2529 Feb  4 14:43 pandaJob.out
[2026-02-04 15:48:17] -rw------- 1 boinc boinc   1009228 Feb  4 14:44 agis_schedconf.cvmfs.json
[2026-02-04 15:48:17] -rw------- 1 boinc boinc   1511668 Feb  4 14:44 agis_ddmendpoints.agis.ALL.json
[2026-02-04 15:48:17] -rw------- 1 boinc boinc       425 Feb  4 14:44 workernode_map.json
[2026-02-04 15:48:17] drwx------ 5 boinc boinc      4096 Feb  4 14:44 pilot3
[2026-02-04 15:48:17] -rw------- 1 boinc boinc 177258356 Feb  4 15:47 HITS.48310589._001096.pool.root.1
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc       530 Feb  4 15:47 boinc_task_state.xml
[2026-02-04 15:48:17] -rw------- 1 boinc boinc        95 Feb  4 15:47 pilot_heartbeat.json
[2026-02-04 15:48:17] -rw------- 1 boinc boinc      1029 Feb  4 15:47 memory_monitor_summary.json
[2026-02-04 15:48:17] -rw------- 1 boinc boinc    289785 Feb  4 15:47 log.48310589._001096.job.log.tgz.1
[2026-02-04 15:48:17] -rw------- 1 boinc boinc      6307 Feb  4 15:47 heartbeat.json
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc      8192 Feb  4 15:47 boinc_mmap_file
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc        27 Feb  4 15:47 wrapper_checkpoint.txt
[2026-02-04 15:48:17] -rw------- 1 boinc boinc      4747 Feb  4 15:48 pilotlog.txt
[2026-02-04 15:48:17] -rw------- 1 boinc boinc    570591 Feb  4 15:48 log.48310589._001096.job.log.1
[2026-02-04 15:48:17] -rw------- 1 boinc boinc       357 Feb  4 15:48 output.list
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc       620 Feb  4 15:48 runtime_log
[2026-02-04 15:48:17] -rw------- 1 boinc boinc    880640 Feb  4 15:48 result.tar.gz
[2026-02-04 15:48:17] -rw------- 1 boinc boinc       661 Feb  4 15:48 spKLDmSxc58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3QIKDmTadqTm.diag
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc      8916 Feb  4 15:48 runtime_log.err
[2026-02-04 15:48:17] -rw-r--r-- 1 boinc boinc     21412 Feb  4 15:48 stderr.txt
[2026-02-04 15:48:17] HITS file was successfully produced:
[2026-02-04 15:48:17] -rw------- 1 boinc boinc 177258356 Feb  4 15:47 shared/HITS.pool.root.1
[2026-02-04 15:48:17]  *** Contents of shared directory: ***
[2026-02-04 15:48:17] total 656332
[2026-02-04 15:48:17] -rw-r--r-- 2 boinc boinc 493320568 Feb  4 14:43 ATLAS.root_0
[2026-02-04 15:48:17] -rw-r--r-- 2 boinc boinc    597752 Feb  4 14:43 input.tar.gz
[2026-02-04 15:48:17] -rw-r--r-- 2 boinc boinc     15845 Feb  4 14:43 start_atlas.sh
[2026-02-04 15:48:17] -rw------- 1 boinc boinc 177258356 Feb  4 15:47 HITS.pool.root.1
[2026-02-04 15:48:17] -rw------- 1 boinc boinc    880640 Feb  4 15:48 result.tar.gz
15:48:39 (182907): run_atlas exited; CPU time 14262.143332
15:48:39 (182907): called boinc_finish(0)

</stderr_txt>
]]>

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