Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:23:39 (3237986): wrapper (7.7.26015): starting
12:23:39 (3237986): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 12:23:39] Arguments: --nthreads 4
[2026-02-04 12:23:39] Threads: 4
[2026-02-04 12:23:39] Checking for CVMFS
[2026-02-04 12:23:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 12:23:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 12:23:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 12:23:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 12:23:40] 2.13.1.0 3933141 9772 98232 155866 2 50 8496352 10240001 1822 130560 0 18731150 99.996 345608 297 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-04 12:23:40] CVMFS is ok
[2026-02-04 12:23:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 12:23:40] Checking for apptainer binary...
[2026-02-04 12:23:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 12:23:40] Running /usr/bin/apptainer --version
[2026-02-04 12:23:40] apptainer version 1.4.5
[2026-02-04 12:23:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 12:23:40] julianvlneu
[2026-02-04 12:23:40] apptainer works
[2026-02-04 12:23:40] Set ATHENA_PROC_NUMBER=4
[2026-02-04 12:23:40] Set ATHENA_CORE_NUMBER=4
[2026-02-04 12:23:40] Starting ATLAS job with PandaID=7000586101
[2026-02-04 12:23:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 13:21:30]  *** The last 200 lines of the pilot log: ***
[2026-02-04 13:21:30]  guid=364871ca-d451-4cb7-a89a-44dc666bc350
[2026-02-04 13:21:30]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-04 13:21:30]  is_altstaged=None
[2026-02-04 13:21:30]  is_tar=False
[2026-02-04 13:21:30]  lfn=log.48317952._012253.job.log.tgz.1
[2026-02-04 13:21:30]  mtime=0
[2026-02-04 13:21:30]  protocol_id=None
[2026-02-04 13:21:30]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 13:21:30]  replicas=None
[2026-02-04 13:21:30]  scope=mc23_13p6TeV
[2026-02-04 13:21:30]  status=None
[2026-02-04 13:21:30]  status_code=0
[2026-02-04 13:21:30]  storage_token=
[2026-02-04 13:21:30]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586101/log.48317952._012253.job.log.tgz.1
[2026-02-04 13:21:30]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/d3/log.48317952._012253.job.log.tgz.1
[2026-02-04 13:21:30]  workdir=None
[2026-02-04 13:21:30] ]
[2026-02-04 13:21:30] 2026-02-04 12:20:55,311 | INFO     | transferring file log.48317952._012253.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586101/log.48317952._012253.job.log.tgz.1 to /var/li
[2026-02-04 13:21:30] 2026-02-04 12:20:55,311 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586101/log.48317952._012253.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-04 13:21:30] 2026-02-04 12:20:55,334 | INFO     | adding to output.list: log.48317952._012253.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/04/d3/log.48317952._012253.job.log.tg
[2026-02-04 13:21:30] 2026-02-04 12:20:55,335 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 13:21:30] 2026-02-04 12:20:55,335 | INFO     | summary of transferred files:
[2026-02-04 13:21:30] 2026-02-04 12:20:55,335 | INFO     |  -- lfn=log.48317952._012253.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 13:21:30] 2026-02-04 12:20:55,336 | INFO     | stage-out finished correctly
[2026-02-04 13:21:30] 2026-02-04 12:20:55,344 | INFO     | time since job start (3414s) is within the limit (349056.0s)
[2026-02-04 13:21:30] 2026-02-04 12:20:57,350 | INFO     | time since job start (3416s) is within the limit (349056.0s)
[2026-02-04 13:21:30] 2026-02-04 12:20:57,527 | INFO     | monitor loop #264: job 0:7000586101 is in state 'finished'
[2026-02-04 13:21:30] 2026-02-04 12:20:57,527 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 13:21:30] 2026-02-04 12:20:57,890 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 13:21:30] 2026-02-04 12:20:57,914 | INFO     | job 7000586101 has state=finished
[2026-02-04 13:21:30] 2026-02-04 12:20:57,914 | INFO     | preparing for final server update for job 7000586101 in state='finished'
[2026-02-04 13:21:30] 2026-02-04 12:20:58,551 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,551 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586101/jobReport.json
[2026-02-04 13:21:30] 2026-02-04 12:20:58,552 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/2/workernode_map.json
[2026-02-04 13:21:30] 2026-02-04 12:20:58,552 | INFO     | this job has now completed (state=finished)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,552 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,552 | INFO     | log transfer has been attempted: DONE
[2026-02-04 13:21:30] 2026-02-04 12:20:58,552 | INFO     | job 7000586101 has finished - writing final server update
[2026-02-04 13:21:30] 2026-02-04 12:20:58,553 | INFO     | total number of processed events: 400 (read)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,554 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586101/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,554 | INFO     | extracted standard info from prmon json
[2026-02-04 13:21:30] 2026-02-04 12:20:58,554 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 13:21:30] 2026-02-04 12:20:58,554 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 13:21:30] 2026-02-04 12:20:58,554 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 13:21:30] 2026-02-04 12:20:58,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | fitting pss+swap vs Time
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | sum of square deviations: 36465800.0
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | sum of deviations: -2115456819.9999998
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | mean x: 1770206035.0
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | mean y: 2541837.4285714286
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | intersect: 102695871739.58095
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | chi2: 0.017729323779087373
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | current memory leak: -58.01 B/s (using 49 data points, chi2=0.02)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | could have reported an average CPU frequency of 4399 MHz (5 samples)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | ..............................
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | . Timing measurements:
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | . get job = 0 s
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | . initial setup = 7 s
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | . payload setup = 7 s
[2026-02-04 13:21:30] 2026-02-04 12:20:58,555 | INFO     | . stage-in = 0 s
[2026-02-04 13:21:30] 2026-02-04 12:20:58,556 | INFO     | . payload execution = 3390 s
[2026-02-04 13:21:30] 2026-02-04 12:20:58,556 | INFO     | . stage-out = 0 s
[2026-02-04 13:21:30] 2026-02-04 12:20:58,556 | INFO     | . log creation = 0 s
[2026-02-04 13:21:30] 2026-02-04 12:20:58,556 | INFO     | ..............................
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | 
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | job summary report
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | --------------------------------------------------
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | PanDA job id: 7000586101
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | task id: 48317952
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | errors: (none)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | pilot state: finished 
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | transexitcode: 0
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | exeerrorcode: 0
[2026-02-04 13:21:30] 2026-02-04 12:20:58,578 | INFO     | exeerrordiag: 
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | exitcode: 0
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | exitmsg: OK
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | cpuconsumptiontime: 12710 s
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | nevents: 400
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | neventsw: 0
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | pid: 3246671
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | pgrp: 3246671
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | corecount: 4
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | event service: False
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | sizes: {0: 2278290, 10: 2278290, 3402: 2303871, 3404: 2312897, 3406: 2312953, 3407: 2313179}
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | --------------------------------------------------
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | 
[2026-02-04 13:21:30] 2026-02-04 12:20:58,579 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-02-04 13:21:30] 2026-02-04 12:20:58,602 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,602 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,602 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,602 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | job 7000586101 has completed (purged errors)
[2026-02-04 13:21:30] 2026-02-04 12:20:58,603 | INFO     | overall cleanup function is called
[2026-02-04 13:21:30] 2026-02-04 12:20:59,610 | INFO     | --- collectZombieJob: --- 10, [3246671]
[2026-02-04 13:21:30] 2026-02-04 12:20:59,610 | INFO     | zombie collector waiting for pid 3246671
[2026-02-04 13:21:30] 2026-02-04 12:20:59,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 13:21:30] 2026-02-04 12:20:59,610 | INFO     | collected zombie processes
[2026-02-04 13:21:30] 2026-02-04 12:20:59,610 | INFO     | will attempt to kill all subprocesses of pid=3246671
[2026-02-04 13:21:30] 2026-02-04 12:20:59,723 | INFO     | process IDs to be killed: [3246671] (in reverse order)
[2026-02-04 13:21:30] 2026-02-04 12:20:59,791 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 13:21:30] 2026-02-04 12:20:59,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 13:21:30] 2026-02-04 12:20:59,795 | INFO     | did not find any defunct processes belonging to 3246671
[2026-02-04 13:21:30] 2026-02-04 12:20:59,798 | INFO     | did not find any defunct processes belonging to 3246671
[2026-02-04 13:21:30] 2026-02-04 12:20:59,799 | INFO     | ready for new job
[2026-02-04 13:21:30] 2026-02-04 12:20:59,799 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 13:21:30] 2026-02-04 12:20:59,800 | INFO     | **************************************
[2026-02-04 13:21:30] 2026-02-04 12:20:59,800 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 13:21:30] 2026-02-04 12:20:59,800 | INFO     | **************************************
[2026-02-04 13:21:30] 2026-02-04 12:20:59,800 | INFO     | 
[2026-02-04 13:21:30] 2026-02-04 12:20:59,801 | INFO     | pilot is running in a VM
[2026-02-04 13:21:30] 2026-02-04 12:20:59,801 | INFO     | architecture information:
[2026-02-04 13:21:30] 2026-02-04 12:20:59,801 | INFO     | executing command: cat /etc/os-release
[2026-02-04 13:21:30] 2026-02-04 12:20:59,816 | INFO     | cat /etc/os-release:
[2026-02-04 13:21:30] NAME="CentOS Linux"
[2026-02-04 13:21:30] VERSION="7 (Core)"
[2026-02-04 13:21:30] ID="centos"
[2026-02-04 13:21:30] ID_LIKE="rhel fedora"
[2026-02-04 13:21:30] VERSION_ID="7"
[2026-02-04 13:21:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 13:21:30] ANSI_COLOR="0;31"
[2026-02-04 13:21:30] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 13:21:30] HOME_URL="https://www.centos.org/"
[2026-02-04 13:21:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 13:21:30] 
[2026-02-04 13:21:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 13:21:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 13:21:30] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 13:21:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 13:21:30] 
[2026-02-04 13:21:30] 2026-02-04 12:20:59,817 | INFO     | **************************************
[2026-02-04 13:21:30] 2026-02-04 12:21:00,320 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-02-04 13:21:30] 2026-02-04 12:21:00,334 | INFO     | sufficient remaining disk space (142505672704 B)
[2026-02-04 13:21:30] 2026-02-04 12:21:00,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 13:21:30] 2026-02-04 12:21:00,335 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 13:21:30] 2026-02-04 12:21:00,335 | INFO     | update_server=False
[2026-02-04 13:21:30] 2026-02-04 12:21:00,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 13:21:30] 2026-02-04 12:21:00,335 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 13:21:30] 2026-02-04 12:21:00,336 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 13:21:30] 2026-02-04 12:21:00,640 | INFO     | all data control threads have been joined
[2026-02-04 13:21:30] 2026-02-04 12:21:00,877 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 13:21:30] 2026-02-04 12:21:00,970 | INFO     | all payload control threads have been joined
[2026-02-04 13:21:30] 2026-02-04 12:21:01,037 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 13:21:30] 2026-02-04 12:21:01,037 | INFO     | aborting loop
[2026-02-04 13:21:30] 2026-02-04 12:21:01,084 | INFO     | all job control threads have been joined
[2026-02-04 13:21:30] 2026-02-04 12:21:01,341 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:01,341 | INFO     | [job] retrieve thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:01,342 | INFO     | [job] queue monitor thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:01,646 | INFO     | [data] control thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:01,763 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:01,956 | INFO     | [payload] failed_post thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:01,976 | INFO     | [payload] control thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:02,043 | INFO     | [job] job monitor thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:02,089 | INFO     | [job] control thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:02,463 | INFO     | [job] validate thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:02,528 | INFO     | [payload] validate_post thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:02,538 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:02,585 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:02,698 | INFO     | [data] copytool_in thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:02,883 | INFO     | [data] copytool_out thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:04,343 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 13:21:30] 2026-02-04 12:21:04,952 | INFO     | [monitor] cgroup control has ended
[2026-02-04 13:21:30] 2026-02-04 12:21:06,629 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 138761923876672)>', '<ExcThread(monitor, started 138760914196224)>']
[2026-02-04 13:21:30] 2026-02-04 12:21:11,655 | INFO     | all workflow threads have been joined
[2026-02-04 13:21:30] 2026-02-04 12:21:11,656 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 13:21:30] 2026-02-04 12:21:11,656 | INFO     | traces error code: 0
[2026-02-04 13:21:30] 2026-02-04 12:21:11,656 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 13:21:30] 2026-02-04 12:21:30,564 | INFO     | PID=3242111 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 13:21:30] 2026-02-04 12:21:30,564 | INFO     | .. there are 3 such processes running
[2026-02-04 13:21:30] 2026-02-04 12:21:30,565 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 13:21:30] 2026-02-04 12:21:30,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 13:21:30] 2026-02-04 12:21:30,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 13:21:30] 2026-02-04 12:21:30,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 13:21:30] 2026-02-04 12:21:30,565 | INFO     | [monitor] control thread has ended
[2026-02-04 13:21:30] 2026-02-04 12:21:30,633 [wrapper] ==== pilot stdout END ====
[2026-02-04 13:21:30] 2026-02-04 12:21:30,638 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 13:21:30] 2026-02-04 12:21:30,643 [wrapper] pilotpid: 3242111
[2026-02-04 13:21:30] 2026-02-04 12:21:30,647 [wrapper] Pilot exit status: 0
[2026-02-04 13:21:30] 2026-02-04 12:21:30,666 [wrapper] pandaids: 7000586101
[2026-02-04 13:21:30] 2026-02-04 12:21:30,709 [wrapper] cleanup supervisor_pilot 3286929 3242112
[2026-02-04 13:21:30] 2026-02-04 12:21:30,714 [wrapper] Test setup, not cleaning
[2026-02-04 13:21:30] 2026-02-04 12:21:30,719 [wrapper] apfmon messages muted
[2026-02-04 13:21:30] 2026-02-04 12:21:30,723 [wrapper] ==== wrapper stdout END ====
[2026-02-04 13:21:30] 2026-02-04 12:21:30,728 [wrapper] ==== wrapper stderr END ====
[2026-02-04 13:21:30]  *** Error codes and diagnostics ***
[2026-02-04 13:21:30]     "exeErrorCode": 0,
[2026-02-04 13:21:30]     "exeErrorDiag": "",
[2026-02-04 13:21:30]     "pilotErrorCode": 0,
[2026-02-04 13:21:30]     "pilotErrorDiag": "",
[2026-02-04 13:21:30]  *** Listing of results directory ***
[2026-02-04 13:21:30] insgesamt 674952
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc    584422 Feb  4 02:26 pilot3.tar.gz
[2026-02-04 13:21:30] -rwx------ 1 yeti boinc     36322 Feb  4 02:28 runpilot2-wrapper.sh
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc      5111 Feb  4 02:29 queuedata.json
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc       100 Feb  4 12:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 13:21:30] -rwxr-xr-x 1 yeti boinc      7986 Feb  4 12:23 run_atlas
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc       105 Feb  4 12:23 job.xml
[2026-02-04 13:21:30] -rw-r--r-- 2 yeti boinc 502971636 Feb  4 12:23 EVNT.48317949._000231.pool.root.1
[2026-02-04 13:21:30] -rw-r--r-- 2 yeti boinc     15845 Feb  4 12:23 start_atlas.sh
[2026-02-04 13:21:30] drwxrwx--x 2 yeti boinc      4096 Feb  4 12:23 shared
[2026-02-04 13:21:30] -rw-r--r-- 2 yeti boinc    597760 Feb  4 12:23 input.tar.gz
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc      6732 Feb  4 12:23 init_data.xml
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc         0 Feb  4 12:23 boinc_setup_complete
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc         0 Feb  4 12:23 boinc_lockfile
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc      2524 Feb  4 12:23 pandaJob.out
[2026-02-04 13:21:30] -rw------- 1 yeti boinc        52 Feb  4 12:23 setup.sh.local
[2026-02-04 13:21:30] -rw------- 1 yeti boinc   1009228 Feb  4 12:23 agis_schedconf.cvmfs.json
[2026-02-04 13:21:30] -rw------- 1 yeti boinc   1511668 Feb  4 12:23 agis_ddmendpoints.agis.ALL.json
[2026-02-04 13:21:30] -rw------- 1 yeti boinc       425 Feb  4 12:24 workernode_map.json
[2026-02-04 13:21:30] drwx------ 5 yeti boinc      4096 Feb  4 12:24 pilot3
[2026-02-04 13:21:30] -rw------- 1 yeti boinc 182618663 Feb  4 13:20 HITS.48317952._012253.pool.root.1
[2026-02-04 13:21:30] -rw------- 1 yeti boinc      1014 Feb  4 13:20 memory_monitor_summary.json
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc       530 Feb  4 13:20 boinc_task_state.xml
[2026-02-04 13:21:30] -rw------- 1 yeti boinc    280909 Feb  4 13:20 log.48317952._012253.job.log.tgz.1
[2026-02-04 13:21:30] -rw------- 1 yeti boinc      6282 Feb  4 13:20 heartbeat.json
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc      8192 Feb  4 13:21 boinc_mmap_file
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc        27 Feb  4 13:21 wrapper_checkpoint.txt
[2026-02-04 13:21:30] -rw------- 1 yeti boinc        95 Feb  4 13:21 pilot_heartbeat.json
[2026-02-04 13:21:30] -rw------- 1 yeti boinc       822 Feb  4 13:21 pilotlog.txt
[2026-02-04 13:21:30] -rw------- 1 yeti boinc    528185 Feb  4 13:21 log.48317952._012253.job.log.1
[2026-02-04 13:21:30] -rw------- 1 yeti boinc       357 Feb  4 13:21 output.list
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc       620 Feb  4 13:21 runtime_log
[2026-02-04 13:21:30] -rw------- 1 yeti boinc    829440 Feb  4 13:21 result.tar.gz
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc      9556 Feb  4 13:21 runtime_log.err
[2026-02-04 13:21:30] -rw------- 1 yeti boinc       640 Feb  4 13:21 k0oNDm6rg78n9Rq4apOajLDm4fhM0noT9bVooX4SDmZyVKDmXIjQZm.diag
[2026-02-04 13:21:30] -rw-r--r-- 1 yeti boinc     21125 Feb  4 13:21 stderr.txt
[2026-02-04 13:21:30] HITS file was successfully produced:
[2026-02-04 13:21:30] -rw------- 1 yeti boinc 182618663 Feb  4 13:20 shared/HITS.pool.root.1
[2026-02-04 13:21:30]  *** Contents of shared directory: ***
[2026-02-04 13:21:30] insgesamt 670944
[2026-02-04 13:21:30] -rw-r--r-- 2 yeti boinc 502971636 Feb  4 12:23 ATLAS.root_0
[2026-02-04 13:21:30] -rw-r--r-- 2 yeti boinc     15845 Feb  4 12:23 start_atlas.sh
[2026-02-04 13:21:30] -rw-r--r-- 2 yeti boinc    597760 Feb  4 12:23 input.tar.gz
[2026-02-04 13:21:30] -rw------- 1 yeti boinc 182618663 Feb  4 13:20 HITS.pool.root.1
[2026-02-04 13:21:30] -rw------- 1 yeti boinc    829440 Feb  4 13:21 result.tar.gz
13:21:32 (3237986): run_atlas exited; CPU time 12799.904574
13:21:32 (3237986): called boinc_finish(0)

</stderr_txt>
]]>

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