Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:45:52 (1374671): wrapper (7.7.26015): starting
01:45:52 (1374671): wrapper: running run_atlas (--nthreads 6)
[2026-02-05 01:45:52] Arguments: --nthreads 6
[2026-02-05 01:45:52] Threads: 6
[2026-02-05 01:45:52] Checking for CVMFS
[2026-02-05 01:45:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-05 01:46:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-05 01:46:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-05 01:46:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-05 01:46:11] 2.13.3.0 1319572 150 53324 155870 0 50 49946562 52428801 929 130560 0 178709 99.991 4533 12 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-02-05 01:46:11] CVMFS is ok
[2026-02-05 01:46:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 01:46:11] Checking for apptainer binary...
[2026-02-05 01:46:11] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-05 01:46:11] Running /usr/bin/apptainer --version
[2026-02-05 01:46:11] apptainer version 1.4.5-2.el9
[2026-02-05 01:46:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 01:46:11] testio008
[2026-02-05 01:46:11] apptainer works
[2026-02-05 01:46:11] Set ATHENA_PROC_NUMBER=6
[2026-02-05 01:46:11] Set ATHENA_CORE_NUMBER=6
[2026-02-05 01:46:11] Starting ATLAS job with PandaID=7000585736
[2026-02-05 01:46:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 03:35:55]  *** The last 200 lines of the pilot log: ***
[2026-02-05 03:35:55] 2026-02-04 18:34:58,401 | INFO     | log transfer has been attempted: DONE
[2026-02-05 03:35:55] 2026-02-04 18:34:58,401 | INFO     | job 7000585736 has finished - writing final server update
[2026-02-05 03:35:55] 2026-02-04 18:34:58,402 | INFO     | total number of processed events: 400 (read)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,407 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-7000585736/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,408 | INFO     | extracted standard info from prmon json
[2026-02-05 03:35:55] 2026-02-04 18:34:58,410 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 03:35:55] 2026-02-04 18:34:58,410 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 03:35:55] 2026-02-04 18:34:58,413 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 03:35:55] 2026-02-04 18:34:58,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 03:35:55] 2026-02-04 18:34:58,416 | INFO     | PID=1378827 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 03:35:55] 2026-02-04 18:34:58,418 | INFO     | fitting pss+swap vs Time
[2026-02-05 03:35:55] 2026-02-04 18:34:58,419 | INFO     | sum of square deviations: 369281342.5
[2026-02-05 03:35:55] 2026-02-04 18:34:58,420 | INFO     | sum of deviations: -6052786487.999998
[2026-02-05 03:35:55] 2026-02-04 18:34:58,420 | INFO     | mean x: 1770226881.5
[2026-02-05 03:35:55] 2026-02-04 18:34:58,420 | INFO     | mean y: 2513473.9056603773
[2026-02-05 03:35:55] 2026-02-04 18:34:58,420 | INFO     | intersect: 29017803757.72923
[2026-02-05 03:35:55] 2026-02-04 18:34:58,420 | INFO     | chi2: 2.209122212912413
[2026-02-05 03:35:55] 2026-02-04 18:34:58,421 | INFO     | sum of square deviations: 319447850.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,421 | INFO     | sum of deviations: 472726819.99999774
[2026-02-05 03:35:55] 2026-02-04 18:34:58,421 | INFO     | mean x: 1770226729.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,421 | INFO     | mean y: 2532679.7722772276
[2026-02-05 03:35:55] 2026-02-04 18:34:58,421 | INFO     | intersect: -2617092565.0968547
[2026-02-05 03:35:55] 2026-02-04 18:34:58,422 | INFO     | chi2: 1.565834015895014
[2026-02-05 03:35:55] 2026-02-04 18:34:58,422 | INFO     | current chi2=1.565834015895014 (change=29.119629201922475 %)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,422 | INFO     | sum of square deviations: 274312120.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,423 | INFO     | sum of deviations: 327339481.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,423 | INFO     | mean x: 1770226576.5
[2026-02-05 03:35:55] 2026-02-04 18:34:58,423 | INFO     | mean y: 2532188.1875
[2026-02-05 03:35:55] 2026-02-04 18:34:58,423 | INFO     | intersect: -2109897436.883083
[2026-02-05 03:35:55] 2026-02-04 18:34:58,423 | INFO     | chi2: 1.5651634119748261
[2026-02-05 03:35:55] 2026-02-04 18:34:58,423 | INFO     | current chi2=1.5651634119748261 (change=0.04282726734637302 %)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,423 | INFO     | right removable region: 95
[2026-02-05 03:35:55] 2026-02-04 18:34:58,424 | INFO     | sum of square deviations: 319447850.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,424 | INFO     | sum of deviations: -20224525234.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,424 | INFO     | mean x: 1770227034.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,424 | INFO     | mean y: 2555662.405940594
[2026-02-05 03:35:55] 2026-02-04 18:34:58,425 | INFO     | intersect: 112077191065.46774
[2026-02-05 03:35:55] 2026-02-04 18:34:58,425 | INFO     | chi2: 0.7928645981390484
[2026-02-05 03:35:55] 2026-02-04 18:34:58,425 | INFO     | current chi2=0.7928645981390484 (change=64.10951854520673 %)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,425 | INFO     | sum of square deviations: 274312120.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,426 | INFO     | sum of deviations: -15254563227.000002
[2026-02-05 03:35:55] 2026-02-04 18:34:58,426 | INFO     | mean x: 1770227186.5
[2026-02-05 03:35:55] 2026-02-04 18:34:58,426 | INFO     | mean y: 2538828.5208333335
[2026-02-05 03:35:55] 2026-02-04 18:34:58,426 | INFO     | intersect: 98445300098.48795
[2026-02-05 03:35:55] 2026-02-04 18:34:58,426 | INFO     | chi2: 0.768528151040958
[2026-02-05 03:35:55] 2026-02-04 18:34:58,426 | INFO     | current chi2=0.768528151040958 (change=3.069432934098852 %)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,426 | INFO     | left removable region: 20
[2026-02-05 03:35:55] 2026-02-04 18:34:58,427 | INFO     | sum of square deviations: 130793150.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,427 | INFO     | sum of deviations: -2933997825.0000005
[2026-02-05 03:35:55] 2026-02-04 18:34:58,427 | INFO     | mean x: 1770227156.0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,427 | INFO     | mean y: 2534581.6133333333
[2026-02-05 03:35:55] 2026-02-04 18:34:58,427 | INFO     | intersect: 39712891167.25973
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | chi2: 0.03341541538697206
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | current memory leak: -22.43 B/s (using 75 data points, chi2=0.03)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | could have reported an average CPU frequency of 4278 MHz (7 samples)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | ..............................
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | . Timing measurements:
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | . get job = 0 s
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | . initial setup = 7 s
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | . payload setup = 5 s
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | . stage-in = 0 s
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | . payload execution = 6414 s
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | . stage-out = 0 s
[2026-02-05 03:35:55] 2026-02-04 18:34:58,428 | INFO     | . log creation = 0 s
[2026-02-05 03:35:55] 2026-02-04 18:34:58,429 | INFO     | ..............................
[2026-02-05 03:35:55] 2026-02-04 18:34:58,505 | INFO     | 
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | job summary report
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | --------------------------------------------------
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | PanDA job id: 7000585736
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | task id: 48431096
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | errors: (none)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | pilot state: finished 
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | transexitcode: 0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | exeerrorcode: 0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | exeerrordiag: 
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | exitcode: 0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | exitmsg: OK
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | cpuconsumptiontime: 36530 s
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | nevents: 400
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | neventsw: 0
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | pid: 1383450
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | pgrp: 1383450
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | corecount: 6
[2026-02-05 03:35:55] 2026-02-04 18:34:58,506 | INFO     | event service: False
[2026-02-05 03:35:55] 2026-02-04 18:34:58,507 | INFO     | sizes: {0: 2278266, 11: 2278266, 6423: 2305429, 6424: 2314427, 6426: 2314483, 6428: 2314677}
[2026-02-05 03:35:55] 2026-02-04 18:34:58,507 | INFO     | --------------------------------------------------
[2026-02-05 03:35:55] 2026-02-04 18:34:58,507 | INFO     | 
[2026-02-05 03:35:55] 2026-02-04 18:34:58,507 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-02-05 03:35:55] 2026-02-04 18:34:58,520 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,521 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,522 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,522 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 03:35:55] 2026-02-04 18:34:58,522 | INFO     | job 7000585736 has completed (purged errors)
[2026-02-05 03:35:55] 2026-02-04 18:34:58,522 | INFO     | overall cleanup function is called
[2026-02-05 03:35:55] 2026-02-04 18:34:59,528 | INFO     | --- collectZombieJob: --- 10, [1383450]
[2026-02-05 03:35:55] 2026-02-04 18:34:59,528 | INFO     | zombie collector waiting for pid 1383450
[2026-02-05 03:35:55] 2026-02-04 18:34:59,528 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 03:35:55] 2026-02-04 18:34:59,528 | INFO     | collected zombie processes
[2026-02-05 03:35:55] 2026-02-04 18:34:59,528 | INFO     | will attempt to kill all subprocesses of pid=1383450
[2026-02-05 03:35:55] 2026-02-04 18:34:59,555 | INFO     | process IDs to be killed: [1383450] (in reverse order)
[2026-02-05 03:35:55] 2026-02-04 18:34:59,571 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 03:35:55] 2026-02-04 18:34:59,571 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 03:35:55] 2026-02-04 18:34:59,573 | INFO     | did not find any defunct processes belonging to 1383450
[2026-02-05 03:35:55] 2026-02-04 18:34:59,574 | INFO     | did not find any defunct processes belonging to 1383450
[2026-02-05 03:35:55] 2026-02-04 18:34:59,574 | INFO     | ready for new job
[2026-02-05 03:35:55] 2026-02-04 18:34:59,574 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 03:35:55] 2026-02-04 18:34:59,575 | INFO     | **************************************
[2026-02-05 03:35:55] 2026-02-04 18:34:59,575 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 03:35:55] 2026-02-04 18:34:59,575 | INFO     | **************************************
[2026-02-05 03:35:55] 2026-02-04 18:34:59,575 | INFO     | 
[2026-02-05 03:35:55] 2026-02-04 18:34:59,575 | INFO     | architecture information:
[2026-02-05 03:35:55] 2026-02-04 18:34:59,576 | INFO     | executing command: cat /etc/os-release
[2026-02-05 03:35:55] 2026-02-04 18:34:59,582 | INFO     | cat /etc/os-release:
[2026-02-05 03:35:55] NAME="CentOS Linux"
[2026-02-05 03:35:55] VERSION="7 (Core)"
[2026-02-05 03:35:55] ID="centos"
[2026-02-05 03:35:55] ID_LIKE="rhel fedora"
[2026-02-05 03:35:55] VERSION_ID="7"
[2026-02-05 03:35:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 03:35:55] ANSI_COLOR="0;31"
[2026-02-05 03:35:55] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 03:35:55] HOME_URL="https://www.centos.org/"
[2026-02-05 03:35:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 03:35:55] 
[2026-02-05 03:35:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 03:35:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 03:35:55] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 03:35:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 03:35:55] 
[2026-02-05 03:35:55] 2026-02-04 18:34:59,582 | INFO     | **************************************
[2026-02-05 03:35:55] 2026-02-04 18:35:00,085 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-02-05 03:35:55] 2026-02-04 18:35:00,092 | INFO     | sufficient remaining disk space (279269343232 B)
[2026-02-05 03:35:55] 2026-02-04 18:35:00,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 03:35:55] 2026-02-04 18:35:00,092 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 03:35:55] 2026-02-04 18:35:00,093 | INFO     | update_server=False
[2026-02-05 03:35:55] 2026-02-04 18:35:00,093 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 03:35:55] 2026-02-04 18:35:00,093 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 03:35:55] 2026-02-04 18:35:00,093 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 03:35:55] 2026-02-04 18:35:00,205 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 03:35:55] 2026-02-04 18:35:00,205 | INFO     | aborting loop
[2026-02-05 03:35:55] 2026-02-04 18:35:00,713 | INFO     | all data control threads have been joined
[2026-02-05 03:35:55] 2026-02-04 18:35:01,097 | INFO     | [job] retrieve thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:01,098 | INFO     | [job] queue monitor thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:01,210 | INFO     | [job] job monitor thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:01,301 | INFO     | [payload] failed_post thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:01,486 | INFO     | all payload control threads have been joined
[2026-02-05 03:35:55] 2026-02-04 18:35:01,598 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:01,718 | INFO     | [data] control thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:01,761 | INFO     | all job control threads have been joined
[2026-02-05 03:35:55] 2026-02-04 18:35:02,078 | INFO     | [job] validate thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:02,098 | INFO     | [data] copytool_out thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:02,135 | INFO     | [payload] validate_post thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:02,328 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:02,339 | INFO     | [data] copytool_in thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:02,446 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:02,491 | INFO     | [payload] control thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:02,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 03:35:55] 2026-02-04 18:35:02,766 | INFO     | [job] control thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:06,522 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:10,367 | INFO     | job.realtimelogging is not enabled
[2026-02-05 03:35:55] 2026-02-04 18:35:11,372 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 03:35:55] 2026-02-04 18:35:30,502 | INFO     | PID=1378827 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 03:35:55] 2026-02-04 18:35:30,502 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 03:35:55] 2026-02-04 18:35:30,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 03:35:55] 2026-02-04 18:35:30,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 03:35:55] 2026-02-04 18:35:49,335 | INFO     | [monitor] cgroup control has ended
[2026-02-05 03:35:55] 2026-02-04 18:35:50,721 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140253551703872)>', '<ExcThread(monitor, started 140253029463808)>']
[2026-02-05 03:35:55] 2026-02-04 18:35:51,607 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 03:35:55] 2026-02-04 18:35:51,607 | INFO     | [monitor] control thread has ended
[2026-02-05 03:35:55] 2026-02-04 18:35:55,746 | INFO     | all workflow threads have been joined
[2026-02-05 03:35:55] 2026-02-04 18:35:55,746 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 03:35:55] 2026-02-04 18:35:55,746 | INFO     | traces error code: 0
[2026-02-05 03:35:55] 2026-02-04 18:35:55,747 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 03:35:55] 2026-02-04 18:35:55,862 [wrapper] ==== pilot stdout END ====
[2026-02-05 03:35:55] 2026-02-04 18:35:55,866 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 03:35:55] 2026-02-04 18:35:55,867 [wrapper] pilotpid: 1378827
[2026-02-05 03:35:55] 2026-02-04 18:35:55,880 [wrapper] Pilot exit status: 0
[2026-02-05 03:35:55] 2026-02-04 18:35:55,889 [wrapper] pandaids: 7000585736
[2026-02-05 03:35:55] 2026-02-04 18:35:55,928 [wrapper] cleanup supervisor_pilot 1402281 1378828
[2026-02-05 03:35:55] 2026-02-04 18:35:55,930 [wrapper] Test setup, not cleaning
[2026-02-05 03:35:55] 2026-02-04 18:35:55,932 [wrapper] apfmon messages muted
[2026-02-05 03:35:55] 2026-02-04 18:35:55,934 [wrapper] ==== wrapper stdout END ====
[2026-02-05 03:35:55] 2026-02-04 18:35:55,935 [wrapper] ==== wrapper stderr END ====
[2026-02-05 03:35:55]  *** Error codes and diagnostics ***
[2026-02-05 03:35:55]     "exeErrorCode": 0,
[2026-02-05 03:35:55]     "exeErrorDiag": "",
[2026-02-05 03:35:55]     "pilotErrorCode": 0,
[2026-02-05 03:35:55]     "pilotErrorDiag": "",
[2026-02-05 03:35:55]  *** Listing of results directory ***
[2026-02-05 03:35:55] total 945240
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc    584422 Feb  4 10:26 pilot3.tar.gz
[2026-02-05 03:35:55] -rwx------. 1 boinc boinc     36322 Feb  4 10:31 runpilot2-wrapper.sh
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc      5111 Feb  4 10:34 queuedata.json
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc       100 Feb  5 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 03:35:55] -rwxr-xr-x. 1 boinc boinc      7986 Feb  5 01:45 run_atlas
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc       105 Feb  5 01:45 job.xml
[2026-02-05 03:35:55] -rw-r--r--. 2 boinc boinc     15845 Feb  5 01:45 start_atlas.sh
[2026-02-05 03:35:55] drwxrwx--x. 2 boinc boinc        68 Feb  5 01:45 shared
[2026-02-05 03:35:55] -rw-r--r--. 2 boinc boinc    597773 Feb  5 01:45 input.tar.gz
[2026-02-05 03:35:55] -rw-r--r--. 2 boinc boinc 676512089 Feb  5 01:45 EVNT.48431094._000136.pool.root.1
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc         0 Feb  5 01:45 boinc_lockfile
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc      2554 Feb  5 01:46 pandaJob.out
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc   1009236 Feb  5 01:47 agis_schedconf.cvmfs.json
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc   1511668 Feb  5 01:47 agis_ddmendpoints.agis.ALL.json
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc       424 Feb  5 01:47 workernode_map.json
[2026-02-05 03:35:55] drwx------. 5 boinc boinc      4096 Feb  5 01:47 pilot3
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc 284857697 Feb  5 03:34 HITS.48431096._005506.pool.root.1
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc       530 Feb  5 03:34 boinc_task_state.xml
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc      1013 Feb  5 03:34 memory_monitor_summary.json
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc    360687 Feb  5 03:34 log.48431096._005506.job.log.tgz.1
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc      6303 Feb  5 03:34 heartbeat.json
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc        95 Feb  5 03:35 pilot_heartbeat.json
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc      9533 Feb  5 03:35 init_data.xml
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc        27 Feb  5 03:35 wrapper_checkpoint.txt
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc      8192 Feb  5 03:35 boinc_mmap_file
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc      4817 Feb  5 03:35 pilotlog.txt
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc    948354 Feb  5 03:35 log.48431096._005506.job.log.1
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc       357 Feb  5 03:35 output.list
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc       620 Feb  5 03:35 runtime_log
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc   1331200 Feb  5 03:35 result.tar.gz
[2026-02-05 03:35:55] -rw-------. 1 boinc boinc       641 Feb  5 03:35 zBQMDmcug78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmNUWKDmH2BBIn.diag
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc      8774 Feb  5 03:35 runtime_log.err
[2026-02-05 03:35:55] -rw-r--r--. 1 boinc boinc     20799 Feb  5 03:35 stderr.txt
[2026-02-05 03:35:56] HITS file was successfully produced:
[2026-02-05 03:35:56] -rw-------. 1 boinc boinc 284857697 Feb  5 03:34 shared/HITS.pool.root.1
[2026-02-05 03:35:56]  *** Contents of shared directory: ***
[2026-02-05 03:35:56] total 940744
[2026-02-05 03:35:56] -rw-r--r--. 2 boinc boinc     15845 Feb  5 01:45 start_atlas.sh
[2026-02-05 03:35:56] -rw-r--r--. 2 boinc boinc    597773 Feb  5 01:45 input.tar.gz
[2026-02-05 03:35:56] -rw-r--r--. 2 boinc boinc 676512089 Feb  5 01:45 ATLAS.root_0
[2026-02-05 03:35:56] -rw-------. 1 boinc boinc 284857697 Feb  5 03:34 HITS.pool.root.1
[2026-02-05 03:35:56] -rw-------. 1 boinc boinc   1331200 Feb  5 03:35 result.tar.gz
03:35:57 (1374671): run_atlas exited; CPU time 36580.680227
03:35:57 (1374671): called boinc_finish(0)

</stderr_txt>
]]>

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