Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:26:50 (872842): wrapper (7.7.26015): starting
02:26:50 (872842): wrapper: running run_atlas (--nthreads 10)
[2026-02-04 02:26:50] Arguments: --nthreads 10
[2026-02-04 02:26:50] Threads: 10
[2026-02-04 02:26:50] Checking for CVMFS
[2026-02-04 02:26:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 02:26:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 02:26:51] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 02:26:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 02:26:52] 2.13.3.0 8993 51332 165792 155860 0 545 28300385 40960000 30560 16776704 0 291588825 99.782 211477086 47830 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-04 02:26:52] CVMFS is ok
[2026-02-04 02:26:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 02:26:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 02:26:52] Further information can be found at the LHC@home message board.
[2026-02-04 02:26:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 02:26:52] Checking for apptainer binary...
[2026-02-04 02:26:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 02:26:52] Running /usr/bin/apptainer --version
[2026-02-04 02:26:53] apptainer version 1.4.5-2.el9
[2026-02-04 02:26:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 02:26:54] c-208-40.aglt2.org
[2026-02-04 02:26:54] apptainer works
[2026-02-04 02:26:54] Set ATHENA_PROC_NUMBER=10
[2026-02-04 02:26:54] Set ATHENA_CORE_NUMBER=10
[2026-02-04 02:26:54] Starting ATLAS job with PandaID=6995182720
[2026-02-04 02:26:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
02:40:10 (872842): BOINC client no longer exists - exiting
02:40:10 (872842): timer handler: client dead, exiting
02:45:06 (1113106): wrapper (7.7.26015): starting
02:45:06 (1113106): wrapper: running run_atlas (--nthreads 8)
[2026-02-04 02:45:06] Arguments: --nthreads 8
[2026-02-04 02:45:06] Threads: 8
[2026-02-04 02:45:06] This job has been restarted, cleaning up previous attempt
[2026-02-04 02:45:06] Checking for CVMFS
[2026-02-04 02:45:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 02:45:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 02:45:06] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 02:45:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 02:45:07] 2.13.3.0 8993 51350 174684 155860 2 757 29510128 40960001 24492 16776704 0 292062045 99.782 211972630 47849 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-04 02:45:07] CVMFS is ok
[2026-02-04 02:45:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 02:45:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 02:45:07] Further information can be found at the LHC@home message board.
[2026-02-04 02:45:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 02:45:07] Checking for apptainer binary...
[2026-02-04 02:45:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 02:45:07] Running /usr/bin/apptainer --version
[2026-02-04 02:45:07] apptainer version 1.4.5-2.el9
[2026-02-04 02:45:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 02:45:07] c-208-40.aglt2.org
[2026-02-04 02:45:07] apptainer works
[2026-02-04 02:45:07] Set ATHENA_PROC_NUMBER=8
[2026-02-04 02:45:07] Set ATHENA_CORE_NUMBER=8
[2026-02-04 02:45:07] Starting ATLAS job with PandaID=6995182720
[2026-02-04 02:45:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 04:28:36]  *** The last 200 lines of the pilot log: ***
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | mean y: 2439918.1894736844
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | intersect: -112746197373.05075
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | chi2: 1.5361450413889013
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | current chi2=1.5361450413889013 (change=-0.11384883760573307 %)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | right removable region: 94
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | sum of square deviations: 265825434.98947364
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | sum of deviations: 2235796435.4526315
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | mean x: 1770194317.0105264
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | mean y: 2496431.547368421
[2026-02-04 04:28:36] 2026-02-04 09:27:30,329 | INFO     | intersect: -14886199769.353662
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | chi2: 0.002968674946491181
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | current chi2=0.002968674946491181 (change=99.80652512176044 %)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | sum of square deviations: 226019732.4888887
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | sum of deviations: 1468467466.888889
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | mean x: 1770194469.511111
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | mean y: 2499324.111111111
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | intersect: -11498589363.67191
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | chi2: 0.0010146786434566738
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | current chi2=0.0010146786434566738 (change=65.8204868587593 %)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | sum of square deviations: 190400154.98823565
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | sum of deviations: 919551376.3176471
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | mean x: 1770194622.0117648
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | mean y: 2501668.682352941
[2026-02-04 04:28:36] 2026-02-04 09:27:30,330 | INFO     | intersect: -8546781818.621489
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | chi2: 0.0004516377301291226
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | current chi2=0.0004516377301291226 (change=55.4895795785607 %)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | sum of square deviations: 158734139.98750016
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | sum of deviations: 663429795.7374998
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | mean x: 1770194774.5125
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | mean y: 2502884.7625
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | intersect: -7396031279.109859
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | chi2: 0.000327791697033509
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | current chi2=0.000327791697033509 (change=27.421542717479824 %)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | sum of square deviations: 130789124.98666653
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | sum of deviations: 644965025.7733333
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | mean x: 1770194927.0133333
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | mean y: 2502985.2266666666
[2026-02-04 04:28:36] 2026-02-04 09:27:30,331 | INFO     | intersect: -8726921703.877813
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | chi2: 0.00026051503283184354
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | current chi2=0.00026051503283184354 (change=20.52421242225303 %)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | left removable region: 50
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | sum of square deviations: 26400495.0
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | sum of deviations: 136964642.0
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | mean x: 1770195506.5
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | mean y: 2506740.0454545454
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | intersect: -9181192043.548609
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | chi2: 4.8714859154445566e-05
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | current memory leak: 5.19 B/s (using 44 data points, chi2=0.00)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | ..............................
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | . Timing measurements:
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | . get job = 0 s
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | . initial setup = 1 s
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | . payload setup = 7 s
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | . stage-in = 0 s
[2026-02-04 04:28:36] 2026-02-04 09:27:30,332 | INFO     | . payload execution = 6105 s
[2026-02-04 04:28:36] 2026-02-04 09:27:30,333 | INFO     | . stage-out = 0 s
[2026-02-04 04:28:36] 2026-02-04 09:27:30,333 | INFO     | . log creation = 0 s
[2026-02-04 04:28:36] 2026-02-04 09:27:30,333 | INFO     | ..............................
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | 
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | job summary report
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | --------------------------------------------------
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | PanDA job id: 6995182720
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | task id: 48318010
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | errors: (none)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | pilot state: finished 
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | transexitcode: 0
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | exeerrorcode: 0
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | exeerrordiag: 
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | exitcode: 0
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | exitmsg: OK
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | cpuconsumptiontime: 22772 s
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | nevents: 400
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | neventsw: 0
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | pid: 1164500
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | pgrp: 1164500
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | corecount: 8
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | event service: False
[2026-02-04 04:28:36] 2026-02-04 09:27:30,381 | INFO     | sizes: {0: 2278224, 11: 2278224, 6116: 2305059, 6117: 2314113, 6119: 2314251}
[2026-02-04 04:28:36] 2026-02-04 09:27:30,382 | INFO     | --------------------------------------------------
[2026-02-04 04:28:36] 2026-02-04 09:27:30,382 | INFO     | 
[2026-02-04 04:28:36] 2026-02-04 09:27:30,382 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-02-04 04:28:36] 2026-02-04 09:27:30,424 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,424 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,424 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,424 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,424 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,424 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | job 6995182720 has completed (purged errors)
[2026-02-04 04:28:36] 2026-02-04 09:27:30,425 | INFO     | overall cleanup function is called
[2026-02-04 04:28:36] 2026-02-04 09:27:30,967 | WARNING  | process 1164500 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 04:28:36] 2026-02-04 09:27:31,296 | INFO     | using path: /tmp/boinchome/slots/4/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 04:28:36] 2026-02-04 09:27:31,431 | INFO     | --- collectZombieJob: --- 10, [1164500]
[2026-02-04 04:28:36] 2026-02-04 09:27:31,431 | INFO     | zombie collector waiting for pid 1164500
[2026-02-04 04:28:36] 2026-02-04 09:27:31,432 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 04:28:36] 2026-02-04 09:27:31,432 | INFO     | collected zombie processes
[2026-02-04 04:28:36] 2026-02-04 09:27:31,432 | INFO     | will attempt to kill all subprocesses of pid=1164500
[2026-02-04 04:28:36] 2026-02-04 09:27:32,042 | INFO     | number of running child processes to parent process 1164500: 1
[2026-02-04 04:28:36] 2026-02-04 09:27:32,042 | INFO     | maximum number of monitored processes: 6
[2026-02-04 04:28:36] 2026-02-04 09:27:32,042 | INFO     | aborting job monitoring since job object (job id=6995182720) has expired
[2026-02-04 04:28:36] 2026-02-04 09:27:32,165 | INFO     | process IDs to be killed: [1164500] (in reverse order)
[2026-02-04 04:28:36] 2026-02-04 09:27:32,332 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 04:28:36] 2026-02-04 09:27:32,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 04:28:36] 2026-02-04 09:27:32,352 | INFO     | did not find any defunct processes belonging to 1164500
[2026-02-04 04:28:36] 2026-02-04 09:27:32,371 | INFO     | did not find any defunct processes belonging to 1164500
[2026-02-04 04:28:36] 2026-02-04 09:27:32,371 | INFO     | ready for new job
[2026-02-04 04:28:36] 2026-02-04 09:27:32,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 04:28:36] 2026-02-04 09:27:32,373 | INFO     | **************************************
[2026-02-04 04:28:36] 2026-02-04 09:27:32,373 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 04:28:36] 2026-02-04 09:27:32,373 | INFO     | **************************************
[2026-02-04 04:28:36] 2026-02-04 09:27:32,373 | INFO     | 
[2026-02-04 04:28:36] 2026-02-04 09:27:32,377 | INFO     | architecture information:
[2026-02-04 04:28:36] 2026-02-04 09:27:32,377 | INFO     | executing command: cat /etc/os-release
[2026-02-04 04:28:36] 2026-02-04 09:27:32,394 | INFO     | cat /etc/os-release:
[2026-02-04 04:28:36] NAME="CentOS Linux"
[2026-02-04 04:28:36] VERSION="7 (Core)"
[2026-02-04 04:28:36] ID="centos"
[2026-02-04 04:28:36] ID_LIKE="rhel fedora"
[2026-02-04 04:28:36] VERSION_ID="7"
[2026-02-04 04:28:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 04:28:36] ANSI_COLOR="0;31"
[2026-02-04 04:28:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 04:28:36] HOME_URL="https://www.centos.org/"
[2026-02-04 04:28:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 04:28:36] 
[2026-02-04 04:28:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 04:28:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 04:28:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 04:28:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 04:28:36] 
[2026-02-04 04:28:36] 2026-02-04 09:27:32,394 | INFO     | **************************************
[2026-02-04 04:28:36] 2026-02-04 09:27:32,898 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-02-04 04:28:36] 2026-02-04 09:27:32,914 | INFO     | sufficient remaining disk space (166428934144 B)
[2026-02-04 04:28:36] 2026-02-04 09:27:32,914 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 04:28:36] 2026-02-04 09:27:32,914 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 04:28:36] 2026-02-04 09:27:32,914 | INFO     | update_server=False
[2026-02-04 04:28:36] 2026-02-04 09:27:32,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 04:28:36] 2026-02-04 09:27:32,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 04:28:36] 2026-02-04 09:27:32,915 | INFO     | will abort loop
[2026-02-04 04:28:36] 2026-02-04 09:27:33,328 | INFO     | all job control threads have been joined
[2026-02-04 04:28:36] 2026-02-04 09:27:33,410 | INFO     | all data control threads have been joined
[2026-02-04 04:28:36] 2026-02-04 09:27:33,665 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 04:28:36] 2026-02-04 09:27:33,921 | INFO     | [job] retrieve thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:33,925 | INFO     | [job] job monitor thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:33,983 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:34,211 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 04:28:36] 2026-02-04 09:27:34,240 | INFO     | [payload] failed_post thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:34,334 | INFO     | [job] control thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:34,389 | INFO     | all payload control threads have been joined
[2026-02-04 04:28:36] 2026-02-04 09:27:34,398 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:34,416 | INFO     | [data] control thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:34,832 | INFO     | [payload] validate_post thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:34,974 | INFO     | [data] copytool_in thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:34,999 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:35,181 | INFO     | [job] validate thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:35,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 04:28:36] 2026-02-04 09:27:35,394 | INFO     | [payload] control thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:35,671 | INFO     | [data] copytool_out thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:36,400 | INFO     | [job] queue monitor thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:38,219 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:27:43,310 | INFO     | job.realtimelogging is not enabled
[2026-02-04 04:28:36] 2026-02-04 09:27:44,315 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 04:28:36] 2026-02-04 09:28:02,909 | INFO     | PID=1144284 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 04:28:36] 2026-02-04 09:28:02,909 | INFO     | .. there are 28 such processes running
[2026-02-04 04:28:36] 2026-02-04 09:28:02,909 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 04:28:36] 2026-02-04 09:28:02,909 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 04:28:36] 2026-02-04 09:28:02,909 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 04:28:36] 2026-02-04 09:28:30,317 | INFO     | [monitor] cgroup control has ended
[2026-02-04 04:28:36] 2026-02-04 09:28:30,934 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090245162816)>', '<ExcThread(monitor, started 140089862637312)>']
[2026-02-04 04:28:36] 2026-02-04 09:28:31,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 04:28:36] 2026-02-04 09:28:31,086 | INFO     | [monitor] control thread has ended
[2026-02-04 04:28:36] 2026-02-04 09:28:35,960 | INFO     | all workflow threads have been joined
[2026-02-04 04:28:36] 2026-02-04 09:28:35,960 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 04:28:36] 2026-02-04 09:28:35,960 | INFO     | traces error code: 0
[2026-02-04 04:28:36] 2026-02-04 09:28:35,960 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 04:28:36] 2026-02-04 09:28:36,193 [wrapper] ==== pilot stdout END ====
[2026-02-04 04:28:36] 2026-02-04 09:28:36,195 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 04:28:36] 2026-02-04 09:28:36,199 [wrapper] pilotpid: 1144284
[2026-02-04 04:28:36] 2026-02-04 09:28:36,205 [wrapper] Pilot exit status: 0
[2026-02-04 04:28:36] 2026-02-04 09:28:36,293 [wrapper] pandaids: 6995182720 6995182720
[2026-02-04 04:28:36] 2026-02-04 09:28:36,425 [wrapper] cleanup supervisor_pilot 1825749 1144286
[2026-02-04 04:28:36] 2026-02-04 09:28:36,430 [wrapper] Test setup, not cleaning
[2026-02-04 04:28:36] 2026-02-04 09:28:36,435 [wrapper] apfmon messages muted
[2026-02-04 04:28:36] 2026-02-04 09:28:36,438 [wrapper] ==== wrapper stdout END ====
[2026-02-04 04:28:36] 2026-02-04 09:28:36,441 [wrapper] ==== wrapper stderr END ====
[2026-02-04 04:28:36]  *** Error codes and diagnostics ***
[2026-02-04 04:28:36]     "exeErrorCode": 0,
[2026-02-04 04:28:36]     "exeErrorDiag": "",
[2026-02-04 04:28:36]     "pilotErrorCode": 0,
[2026-02-04 04:28:36]     "pilotErrorDiag": "",
[2026-02-04 04:28:36]  *** Listing of results directory ***
[2026-02-04 04:28:36] total 1162184
[2026-02-04 04:28:36] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas    584422 Feb  3 22:08 pilot3.tar.gz
[2026-02-04 04:28:36] -rwx------. 1 boincer umatlas     36322 Feb  3 22:09 runpilot2-wrapper.sh
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 22:09 queuedata.json
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas       100 Feb  4 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 04:28:36] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  4 02:26 run_atlas
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas       105 Feb  4 02:26 job.xml
[2026-02-04 04:28:36] -rw-r--r--. 3 boincer umatlas 499092905 Feb  4 02:26 EVNT.48318008._000102.pool.root.1
[2026-02-04 04:28:36] -rw-r--r--. 3 boincer umatlas 499092905 Feb  4 02:26 ATLAS.root_0
[2026-02-04 04:28:36] drwxrwx--x. 2 boincer umatlas      4096 Feb  4 02:26 shared
[2026-02-04 04:28:36] -rw-r--r--. 2 boincer umatlas    597764 Feb  4 02:26 input.tar.gz
[2026-02-04 04:28:36] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 02:26 start_atlas.sh
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas         0 Feb  4 02:26 boinc_lockfile
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas   1511668 Feb  4 02:27 agis_ddmendpoints.agis.ALL.json
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas      2525 Feb  4 02:45 pandaJob.out
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas        57 Feb  4 02:45 setup.sh.local
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas   1009236 Feb  4 02:45 agis_schedconf.cvmfs.json
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas       431 Feb  4 02:45 workernode_map.json
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas 185523150 Feb  4 04:26 HITS.48318010._008825.pool.root.1
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas       530 Feb  4 04:26 boinc_task_state.xml
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas        96 Feb  4 04:27 pilot_heartbeat.json
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas      1049 Feb  4 04:27 memory_monitor_summary.json
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas    341599 Feb  4 04:27 log.48318010._008825.job.log.tgz.1
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas      6359 Feb  4 04:27 heartbeat.json
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas      7184 Feb  4 04:28 init_data.xml
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 04:28 boinc_mmap_file
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas        27 Feb  4 04:28 wrapper_checkpoint.txt
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas      4895 Feb  4 04:28 pilotlog.txt
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas    867596 Feb  4 04:28 log.48318010._008825.job.log.1
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas       357 Feb  4 04:28 output.list
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas       620 Feb  4 04:28 runtime_log
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas   1228800 Feb  4 04:28 result.tar.gz
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas      9426 Feb  4 04:28 runtime_log.err
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas       782 Feb  4 04:28 BYiNDmWRi78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm5ZWKDmgWKLUm.diag
[2026-02-04 04:28:36] -rw-r--r--. 1 boincer umatlas     23418 Feb  4 04:28 stderr.txt
[2026-02-04 04:28:36] HITS file was successfully produced:
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas 185523150 Feb  4 04:26 shared/HITS.pool.root.1
[2026-02-04 04:28:36]  *** Contents of shared directory: ***
[2026-02-04 04:28:36] total 670380
[2026-02-04 04:28:36] -rw-r--r--. 3 boincer umatlas 499092905 Feb  4 02:26 ATLAS.root_0
[2026-02-04 04:28:36] -rw-r--r--. 2 boincer umatlas    597764 Feb  4 02:26 input.tar.gz
[2026-02-04 04:28:36] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 02:26 start_atlas.sh
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas 185523150 Feb  4 04:26 HITS.pool.root.1
[2026-02-04 04:28:36] -rw-------. 1 boincer umatlas   1228800 Feb  4 04:28 result.tar.gz
04:28:38 (1113106): run_atlas exited; CPU time 22952.109048
04:28:38 (1113106): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN