Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-02-04 07:15:26 (546088): vboxwrapper version 26210
2026-02-04 07:15:26 (546088): BOINC client version: 8.2.8
2026-02-04 07:15:26 (546088): Detected: VirtualBox VboxManage Interface (Version: 7.2.2)
2026-02-04 07:15:26 (546088): Successfully copied 'init_data.xml' to the shared directory.
2026-02-04 07:15:26 (546088): Create VM. (boinc_e7db367b38c6a2c0, slot#108)
2026-02-04 07:15:27 (546088): Setting Memory Size for VM. (4096MB)
2026-02-04 07:15:27 (546088): Setting CPU Count for VM. (1)
2026-02-04 07:15:27 (546088): Setting Chipset Options for VM.
2026-02-04 07:15:28 (546088): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-02-04 07:15:28 (546088): Setting Boot Options for VM.
2026-02-04 07:15:28 (546088): Setting Network Configuration for NAT. (Driver: virtio)
2026-02-04 07:15:29 (546088): Enabling VM Network Access.
2026-02-04 07:15:29 (546088): Disabling USB Support for VM.
2026-02-04 07:15:29 (546088): Disabling COM Port Support for VM.
2026-02-04 07:15:29 (546088): Disabling LPT Port Support for VM.
2026-02-04 07:15:29 (546088): Disabling Audio Support for VM.
2026-02-04 07:15:30 (546088): Disabling Clipboard Support for VM.
2026-02-04 07:15:30 (546088): Disabling Drag and Drop Support for VM.
2026-02-04 07:15:30 (546088): Adding storage controller(s) to VM.
2026-02-04 07:15:30 (546088): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-02-04 07:15:31 (546088): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-02-04 07:15:31 (546088): forwarding host port 51429 to guest port 80
2026-02-04 07:15:31 (546088): Enabling remote desktop for VM.
2026-02-04 07:15:32 (546088): Enabling shared directory for VM.
2026-02-04 07:15:32 (546088): Starting VM using VBoxManage interface. (boinc_e7db367b38c6a2c0, slot#108)
2026-02-04 07:15:34 (546088): Successfully started VM. (PID = '546603')
2026-02-04 07:15:34 (546088): Reporting VM Process ID to BOINC.
2026-02-04 07:15:34 (546088): Guest Log: BIOS: VirtualBox 7.2.2
2026-02-04 07:15:34 (546088): Guest Log: CPUID EDX: 0x178bfbff
2026-02-04 07:15:34 (546088): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-02-04 07:15:34 (546088): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-02-04 07:15:34 (546088): VM state change detected. (old = 'poweredoff', new = 'running')
2026-02-04 07:15:34 (546088): Detected: Web Application Enabled (http://localhost:51429)
2026-02-04 07:15:34 (546088): Detected: Remote Desktop Enabled (localhost:56855)
2026-02-04 07:15:34 (546088): Preference change detected
2026-02-04 07:15:34 (546088): Setting CPU throttle for VM. (100%)
2026-02-04 07:15:34 (546088): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-02-04 07:15:35 (546088): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-02-04 07:15:35 (546088): Guest Log: BIOS: Booting from Hard Disk...
2026-02-04 07:15:38 (546088): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-02-04 07:15:38 (546088): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-02-04 07:15:38 (546088): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-02-04 07:15:43 (546088): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-02-04 07:15:43 (546088): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-02-04 07:15:56 (546088): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-02-04 07:15:56 (546088): Guest Log: 00:00:00.000291 main     Log opened 2026-02-04T06:15:54.281745000Z
2026-02-04 07:15:56 (546088): Guest Log: 00:00:00.000436 main     OS Product: Linux
2026-02-04 07:15:56 (546088): Guest Log: 00:00:00.000480 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-02-04 07:15:56 (546088): Guest Log: 00:00:00.000507 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-02-04 07:15:56 (546088): Guest Log: 00:00:00.000537 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-02-04 07:15:56 (546088): Guest Log: 00:00:00.000538 main     Process ID: 1245
2026-02-04 07:15:56 (546088): Guest Log: 00:00:00.000538 main     Package type: LINUX_64BITS_GENERIC
2026-02-04 07:15:56 (546088): Guest Log: 00:00:00.003218 main     5.2.32 r132073 started. Verbose level = 0
2026-02-04 07:15:56 (546088): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-02-04 07:15:56 (546088): Guest Log: [INFO] Mounting shared directory
2026-02-04 07:15:56 (546088): Guest Log: [INFO] Checking for init_data.xml
2026-02-04 07:15:58 (546088): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-02-04 07:15:58 (546088): Guest Log: [INFO] Detected branch: prod
2026-02-04 07:15:58 (546088): Guest Log: This is the prod version of the ATLAS job wrapper
2026-02-04 07:15:58 (546088): Guest Log: Copying input files
2026-02-04 07:16:01 (546088): Guest Log: Copied input files into RunAtlas.
2026-02-04 07:16:01 (546088): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2026-02-04 07:16:09 (546088): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-02-04 07:16:09 (546088): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-02-04 07:16:09 (546088): Guest Log: 2.6.3.0 1514 0 29504 155858 4 1 3117739 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2026-02-04 07:16:10 (546088): Guest Log: copied the webapp to /var/www
2026-02-04 07:16:10 (546088): Guest Log: core_number=1
2026-02-04 07:16:10 (546088): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-02-04 07:16:11 (546088): Guest Log:  *** Starting ATLAS job. (PandaID=6985348458 taskID=48318010) ***
2026-02-04 08:54:34 (546088): Status Report: Elapsed Time: '6000.000000'
2026-02-04 08:54:34 (546088): Status Report: CPU Time: '5924.590000'
2026-02-04 10:33:35 (546088): Status Report: Elapsed Time: '12000.000000'
2026-02-04 10:33:35 (546088): Status Report: CPU Time: '11870.810000'
2026-02-04 12:12:35 (546088): Status Report: Elapsed Time: '18000.000000'
2026-02-04 12:12:35 (546088): Status Report: CPU Time: '17816.880000'
2026-02-04 13:51:36 (546088): Status Report: Elapsed Time: '24000.000000'
2026-02-04 13:51:36 (546088): Status Report: CPU Time: '23762.860000'
2026-02-04 15:30:36 (546088): Status Report: Elapsed Time: '30000.000000'
2026-02-04 15:30:36 (546088): Status Report: CPU Time: '29708.730000'
2026-02-04 17:09:37 (546088): Status Report: Elapsed Time: '36000.000000'
2026-02-04 17:09:37 (546088): Status Report: CPU Time: '35655.090000'
2026-02-04 18:48:38 (546088): Status Report: Elapsed Time: '42000.000000'
2026-02-04 18:48:38 (546088): Status Report: CPU Time: '41601.530000'
2026-02-04 20:27:38 (546088): Status Report: Elapsed Time: '48000.000000'
2026-02-04 20:27:38 (546088): Status Report: CPU Time: '47548.000000'
2026-02-04 22:06:39 (546088): Status Report: Elapsed Time: '54000.000000'
2026-02-04 22:06:39 (546088): Status Report: CPU Time: '53494.450000'
2026-02-04 22:44:47 (546088): Guest Log:  *** Job finished ***
2026-02-04 22:44:47 (546088): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:44:47,902 | INFO     | end of generic workflow (traces error code: 0)
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:44:47,902 | INFO     | traces error code: 0
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:44:47,902 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,811 | INFO     | PID=5859 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,812 | INFO     | found 0 job(s) in 20 queues
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,813 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,813 | CRITICAL | thread 'MainThread' is not alive
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,813 | INFO     | [monitor] control thread has ended
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,965 [wrapper] ==== pilot stdout END ====
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,971 [wrapper] ==== wrapper stdout RESUME ====
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,976 [wrapper] pilotpid: 5859
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:05,981 [wrapper] Pilot exit status: 0
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:06,007 [wrapper] pandaids: 6985348458
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:06,035 [wrapper] cleanup supervisor_pilot  7666 5860
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:06,040 [wrapper] Test setup, not cleaning
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:06,044 [wrapper] apfmon messages muted
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:06,049 [wrapper] ==== wrapper stdout END ====
2026-02-04 22:44:47 (546088): Guest Log: 2026-02-04 21:45:06,054 [wrapper] ==== wrapper stderr END ====
2026-02-04 22:44:47 (546088): Guest Log:  *** Error codes and diagnostics ***
2026-02-04 22:44:47 (546088): Guest Log:     "exeErrorCode": 0,
2026-02-04 22:44:47 (546088): Guest Log:     "exeErrorDiag": "",
2026-02-04 22:44:47 (546088): Guest Log:     "pilotErrorCode": 0,
2026-02-04 22:44:47 (546088): Guest Log:     "pilotErrorDiag": "",
2026-02-04 22:44:47 (546088): Guest Log:  *** Listing of results directory ***
2026-02-04 22:44:47 (546088): Guest Log: total 197596
2026-02-04 22:44:47 (546088): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 30 05:11 pilot3.tar.gz
2026-02-04 22:44:47 (546088): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 30 05:15 runpilot2-wrapper.sh
2026-02-04 22:44:47 (546088): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 30 05:18 queuedata.json
2026-02-04 22:44:47 (546088): Guest Log: -rw-r--r--. 1 atlas atlas      9396 Feb  4 06:15 init_data.xml
2026-02-04 22:44:47 (546088): Guest Log: -rw-r--r--. 1 atlas atlas    597767 Feb  4 06:15 input.tar.gz
2026-02-04 22:44:47 (546088): Guest Log: -rw-r--r--. 1 atlas atlas     15845 Feb  4 06:15 start_atlas.sh
2026-02-04 22:44:47 (546088): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Feb  4 06:15 EVNT.48318008._000063.pool.root.1 -> /data/./ATLAS.root_0
2026-02-04 22:44:47 (546088): Guest Log: -rw-r--r--. 1 atlas atlas      2524 Feb  4 06:16 pandaJob.out
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas        50 Feb  4 06:16 setup.sh.local
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas   1009228 Feb  4 06:16 agis_schedconf.cvmfs.json
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas       428 Feb  4 06:16 workernode_map.json
2026-02-04 22:44:47 (546088): Guest Log: drwx------. 5 atlas atlas      4096 Feb  4 06:16 pilot3
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas 181343322 Feb  4 21:43 HITS.48318010._003469.pool.root.1
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas        95 Feb  4 21:44 pilot_heartbeat.json
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas      1026 Feb  4 21:44 memory_monitor_summary.json
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas   1511668 Feb  4 21:44 agis_ddmendpoints.agis.ALL.json
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas    953376 Feb  4 21:44 log.48318010._003469.job.log.tgz.1
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas      6384 Feb  4 21:44 heartbeat.json
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas       814 Feb  4 21:45 pilotlog.txt
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas   7608290 Feb  4 21:45 log.48318010._003469.job.log.1
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas       357 Feb  4 21:45 output.list
2026-02-04 22:44:47 (546088): Guest Log: -rw-r--r--. 1 atlas atlas       620 Feb  4 21:45 runtime_log
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas   8581120 Feb  4 21:45 result.tar.gz
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas       655 Feb  4 21:45 Z0CODm41v58nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmAeKKDmNMsm3m.diag
2026-02-04 22:44:47 (546088): Guest Log: -rw-r--r--. 1 atlas atlas      9111 Feb  4 21:45 runtime_log.err
2026-02-04 22:44:47 (546088): Guest Log: Looking for outputfile HITS.48318010._003469.pool.root.1
2026-02-04 22:44:47 (546088): Guest Log: HITS file was successfully produced
2026-02-04 22:44:47 (546088): Guest Log: -rw-------. 1 atlas atlas 181343322 Feb  4 21:43 /home/atlas/RunAtlas/HITS.48318010._003469.pool.root.1
2026-02-04 22:44:47 (546088): Guest Log: Successfully finished the ATLAS job!
2026-02-04 22:44:47 (546088): Guest Log: Copying the results back to the shared directory!
2026-02-04 22:44:47 (546088): Guest Log:  *** Contents of shared directory: ***
2026-02-04 22:44:48 (546088): Guest Log: total 492444
2026-02-04 22:44:48 (546088): Guest Log: -rw-r--r--. 1 root root 495047782 Feb  4 06:15 ATLAS.root_0
2026-02-04 22:44:48 (546088): Guest Log: -rw-r--r--. 1 root root      9396 Feb  4 06:15 init_data.xml
2026-02-04 22:44:48 (546088): Guest Log: -rw-r--r--. 1 root root    597767 Feb  4 06:15 input.tar.gz
2026-02-04 22:44:48 (546088): Guest Log: -rw-r--r--. 1 root root   8581120 Feb  4 21:44 result.tar.gz
2026-02-04 22:44:48 (546088): Guest Log: -rw-r--r--. 1 root root     15845 Feb  4 06:15 start_atlas.sh
2026-02-04 22:44:48 (546088): Guest Log:  *** Success! Shutting down the machine. ***
2026-02-04 22:44:48 (546088): VM Completion File Detected.
2026-02-04 22:44:48 (546088): Powering off VM.
2026-02-04 22:44:48 (546088): Successfully stopped VM.
2026-02-04 22:44:48 (546088): Deregistering VM. (boinc_e7db367b38c6a2c0, slot#108)
2026-02-04 22:44:49 (546088): Removing network bandwidth throttle group from VM.
2026-02-04 22:44:49 (546088): Removing VM from VirtualBox.
2026-02-04 22:44:54 (546088): called boinc_finish(0)

</stderr_txt>
]]>

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