Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:59:39 (2929206): wrapper (7.7.26015): starting
16:59:39 (2929206): wrapper: running run_atlas (--nthreads 3)
[2026-02-04 16:59:39] Arguments: --nthreads 3
[2026-02-04 16:59:39] Threads: 3
[2026-02-04 16:59:39] Checking for CVMFS
[2026-02-04 16:59:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 16:59:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 16:59:39] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 16:59:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 16:59:39] 2.9.2.0 1381994 10097 88080 155869 0 49 26574781 36864000 0 130560 0 4446647 99.985 343163 7859 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-04 16:59:39] CVMFS is ok
[2026-02-04 16:59:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 16:59:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 16:59:39] Further information can be found at the LHC@home message board.
[2026-02-04 16:59:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 16:59:39] Checking for apptainer binary...
[2026-02-04 16:59:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 16:59:39] Running /usr/bin/apptainer --version
[2026-02-04 16:59:39] apptainer version 1.4.1-1.1
[2026-02-04 16:59:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 16:59:39] magicA161a
[2026-02-04 16:59:39] apptainer works
[2026-02-04 16:59:39] Set ATHENA_PROC_NUMBER=3
[2026-02-04 16:59:39] Set ATHENA_CORE_NUMBER=3
[2026-02-04 16:59:39] Starting ATLAS job with PandaID=7000511051
[2026-02-04 16:59:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 18:25:01]  *** The last 200 lines of the pilot log: ***
[2026-02-04 18:25:01] 2026-02-04 17:24:21,559 | INFO     | [data] copytool_out thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:21,562 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:21,590 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:21,755 | INFO     | [data] copytool_in thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:21,844 | INFO     | [payload] failed_post thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:21,892 | INFO     | [job] control thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:22,026 | INFO     | [payload] control thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:22,948 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 18:25:01] 2026-02-04 17:24:26,956 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:29,692 | INFO     | job.realtimelogging is not enabled
[2026-02-04 18:25:01] 2026-02-04 17:24:30,698 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 18:25:01] 2026-02-04 17:24:49,205 | INFO     | PID=2933244 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 18:25:01] 2026-02-04 17:24:49,205 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 18:25:01] 2026-02-04 17:24:49,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 18:25:01] 2026-02-04 17:24:49,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 18:25:01] 2026-02-04 17:24:55,889 | INFO     | [monitor] cgroup control has ended
[2026-02-04 18:25:01] 2026-02-04 17:24:56,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698126124864)>', '<ExcThread(monitor, started 139697493894912)>']
[2026-02-04 18:25:01] 2026-02-04 17:24:57,246 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 18:25:01] 2026-02-04 17:24:57,247 | INFO     | [monitor] control thread has ended
[2026-02-04 18:25:01] 2026-02-04 17:25:01,387 | INFO     | all workflow threads have been joined
[2026-02-04 18:25:01] 2026-02-04 17:25:01,388 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 18:25:01] 2026-02-04 17:25:01,388 | INFO     | traces error code: 0
[2026-02-04 18:25:01] 2026-02-04 17:25:01,388 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 18:25:01] 2026-02-04 17:25:01,439 [wrapper] ==== pilot stdout END ====
[2026-02-04 18:25:01] 2026-02-04 17:25:01,441 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 18:25:01] 2026-02-04 17:25:01,443 [wrapper] pilotpid: 2933244
[2026-02-04 18:25:01] 2026-02-04 17:25:01,445 [wrapper] Pilot exit status: 0
[2026-02-04 18:25:01] 2026-02-04 17:25:01,452 [wrapper] pandaids: 7000511051
[2026-02-04 18:25:01] 2026-02-04 17:25:01,468 [wrapper] cleanup supervisor_pilot 2942724 2933245
[2026-02-04 18:25:01] 2026-02-04 17:25:01,470 [wrapper] Test setup, not cleaning
[2026-02-04 18:25:01] 2026-02-04 17:25:01,472 [wrapper] apfmon messages muted
[2026-02-04 18:25:01] 2026-02-04 17:25:01,474 [wrapper] ==== wrapper stdout END ====
[2026-02-04 18:25:01] 2026-02-04 17:25:01,477 [wrapper] ==== wrapper stderr END ====
[2026-02-04 18:25:01]  *** Error codes and diagnostics ***
[2026-02-04 18:25:01]     "exeErrorCode": 0,
[2026-02-04 18:25:01]     "exeErrorDiag": "",
[2026-02-04 18:25:01]     "pilotErrorCode": 0,
[2026-02-04 18:25:01]     "pilotErrorDiag": "",
[2026-02-04 18:25:01]  *** Listing of results directory ***
[2026-02-04 18:25:01] total 671176
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc    584422 Feb  4 00:41 pilot3.tar.gz
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc      5111 Feb  4 00:42 queuedata.json
[2026-02-04 18:25:01] -rwx------ 1 boinc boinc     36322 Feb  4 00:42 runpilot2-wrapper.sh
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc       100 Feb  4 16:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 18:25:01] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 16:59 run_atlas
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc       105 Feb  4 16:59 job.xml
[2026-02-04 18:25:01] -rw-r--r-- 2 boinc boinc 497404623 Feb  4 16:59 EVNT.48317949._000208.pool.root.1
[2026-02-04 18:25:01] drwxrwx--x 2 boinc boinc      4096 Feb  4 16:59 shared
[2026-02-04 18:25:01] -rw-r--r-- 2 boinc boinc    597755 Feb  4 16:59 input.tar.gz
[2026-02-04 18:25:01] -rw-r--r-- 2 boinc boinc     15845 Feb  4 16:59 start_atlas.sh
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc         0 Feb  4 16:59 boinc_setup_complete
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc      6448 Feb  4 16:59 init_data.xml
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc         0 Feb  4 16:59 boinc_lockfile
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc      2523 Feb  4 16:59 pandaJob.out
[2026-02-04 18:25:01] -rw------- 1 boinc boinc   1009236 Feb  4 16:59 agis_schedconf.cvmfs.json
[2026-02-04 18:25:01] -rw------- 1 boinc boinc   1511668 Feb  4 16:59 agis_ddmendpoints.agis.ALL.json
[2026-02-04 18:25:01] -rw------- 1 boinc boinc       418 Feb  4 16:59 workernode_map.json
[2026-02-04 18:25:01] drwx------ 5 boinc boinc      4096 Feb  4 16:59 pilot3
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc       530 Feb  4 18:23 boinc_task_state.xml
[2026-02-04 18:25:01] -rw------- 1 boinc boinc 183979277 Feb  4 18:23 HITS.48317952._011060.pool.root.1
[2026-02-04 18:25:01] -rw------- 1 boinc boinc      1011 Feb  4 18:24 memory_monitor_summary.json
[2026-02-04 18:25:01] -rw------- 1 boinc boinc        95 Feb  4 18:24 pilot_heartbeat.json
[2026-02-04 18:25:01] -rw------- 1 boinc boinc    246745 Feb  4 18:24 log.48317952._011060.job.log.tgz.1
[2026-02-04 18:25:01] -rw------- 1 boinc boinc      6295 Feb  4 18:24 heartbeat.json
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc      8192 Feb  4 18:24 boinc_mmap_file
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc        27 Feb  4 18:24 wrapper_checkpoint.txt
[2026-02-04 18:25:01] -rw------- 1 boinc boinc      5006 Feb  4 18:25 pilotlog.txt
[2026-02-04 18:25:01] -rw------- 1 boinc boinc    741975 Feb  4 18:25 log.48317952._011060.job.log.1
[2026-02-04 18:25:01] -rw------- 1 boinc boinc       357 Feb  4 18:25 output.list
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc       620 Feb  4 18:25 runtime_log
[2026-02-04 18:25:01] -rw------- 1 boinc boinc   1003520 Feb  4 18:25 result.tar.gz
[2026-02-04 18:25:01] -rw------- 1 boinc boinc       661 Feb  4 18:25 z3aKDmkDf78n9Rq4apOajLDm4fhM0noT9bVooX4SDmMkVKDmRsOZYo.diag
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc      8916 Feb  4 18:25 runtime_log.err
[2026-02-04 18:25:01] -rw-r--r-- 1 boinc boinc      5844 Feb  4 18:25 stderr.txt
[2026-02-04 18:25:01] HITS file was successfully produced:
[2026-02-04 18:25:01] -rw------- 1 boinc boinc 183979277 Feb  4 18:23 shared/HITS.pool.root.1
[2026-02-04 18:25:01]  *** Contents of shared directory: ***
[2026-02-04 18:25:01] total 667004
[2026-02-04 18:25:01] -rw-r--r-- 2 boinc boinc 497404623 Feb  4 16:59 ATLAS.root_0
[2026-02-04 18:25:01] -rw-r--r-- 2 boinc boinc    597755 Feb  4 16:59 input.tar.gz
[2026-02-04 18:25:01] -rw-r--r-- 2 boinc boinc     15845 Feb  4 16:59 start_atlas.sh
[2026-02-04 18:25:01] -rw------- 1 boinc boinc 183979277 Feb  4 18:23 HITS.pool.root.1
[2026-02-04 18:25:01] -rw------- 1 boinc boinc   1003520 Feb  4 18:25 result.tar.gz
18:25:03 (2929206): run_atlas exited; CPU time 14541.179221
18:25:03 (2929206): called boinc_finish(0)

</stderr_txt>
]]>

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