Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:39 (3248677): wrapper (7.7.26015): starting
00:01:39 (3248677): wrapper: running run_atlas (--nthreads 12)
[2026-02-04 00:01:39] Arguments: --nthreads 12
[2026-02-04 00:01:39] Threads: 12
[2026-02-04 00:01:39] Checking for CVMFS
[2026-02-04 00:01:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 00:01:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 00:01:40] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 00:01:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 00:01:41] 2.13.3.0 10097 58495 162988 155855 0 306 38591683 39288832 7063 16776704 0 30274296 99.672 40004223 40368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-02-04 00:01:41] CVMFS is ok
[2026-02-04 00:01:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 00:01:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 00:01:41] Further information can be found at the LHC@home message board.
[2026-02-04 00:01:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 00:01:41] Checking for apptainer binary...
[2026-02-04 00:01:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 00:01:41] Running /usr/bin/apptainer --version
[2026-02-04 00:01:41] apptainer version 1.4.5-2.el9
[2026-02-04 00:01:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 00:01:41] c-210-15.aglt2.org
[2026-02-04 00:01:41] apptainer works
[2026-02-04 00:01:41] Set ATHENA_PROC_NUMBER=12
[2026-02-04 00:01:41] Set ATHENA_CORE_NUMBER=12
[2026-02-04 00:01:42] Starting ATLAS job with PandaID=6995182163
[2026-02-04 00:01:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 06:45:33]  *** The last 200 lines of the pilot log: ***
[2026-02-04 06:45:33] 2026-02-04 10:00:08,834 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 06:45:33] 2026-02-04 10:00:08,838 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 06:45:33] 2026-02-04 10:00:08,838 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 06:45:33] 2026-02-04 10:00:08,852 | INFO     | fitting pss+swap vs Time
[2026-02-04 06:45:33] 2026-02-04 10:00:08,852 | INFO     | sum of square deviations: 7641190389.278343
[2026-02-04 06:45:33] 2026-02-04 10:00:08,863 | INFO     | sum of deviations: -75385778901.74222
[2026-02-04 06:45:33] 2026-02-04 10:00:08,863 | INFO     | mean x: 1770190328.3195877
[2026-02-04 06:45:33] 2026-02-04 10:00:08,863 | INFO     | mean y: 2599362.81443299
[2026-02-04 06:45:33] 2026-02-04 10:00:08,863 | INFO     | intersect: 17466786211.495487
[2026-02-04 06:45:33] 2026-02-04 10:00:08,864 | INFO     | chi2: 8.888244611430137
[2026-02-04 06:45:33] 2026-02-04 10:00:08,864 | INFO     | sum of square deviations: 7254236469.122388
[2026-02-04 06:45:33] 2026-02-04 10:00:08,876 | INFO     | sum of deviations: 21336787897.290157
[2026-02-04 06:45:33] 2026-02-04 10:00:08,876 | INFO     | mean x: 1770190175.8566434
[2026-02-04 06:45:33] 2026-02-04 10:00:08,876 | INFO     | mean y: 2637476.0314685316
[2026-02-04 06:45:33] 2026-02-04 10:00:08,876 | INFO     | intersect: -5203999015.746607
[2026-02-04 06:45:33] 2026-02-04 10:00:08,877 | INFO     | chi2: 5.054276688124847
[2026-02-04 06:45:33] 2026-02-04 10:00:08,877 | INFO     | current chi2=5.054276688124847 (change=43.13526563360858 %)
[2026-02-04 06:45:33] 2026-02-04 10:00:08,877 | INFO     | sum of square deviations: 6880516200.256244
[2026-02-04 06:45:33] 2026-02-04 10:00:08,885 | INFO     | sum of deviations: 81748212350.65485
[2026-02-04 06:45:33] 2026-02-04 10:00:08,885 | INFO     | mean x: 1770190023.3807828
[2026-02-04 06:45:33] 2026-02-04 10:00:08,885 | INFO     | mean y: 2661954.75088968
[2026-02-04 06:45:33] 2026-02-04 10:00:08,885 | INFO     | intersect: -21029171372.95113
[2026-02-04 06:45:33] 2026-02-04 10:00:08,886 | INFO     | chi2: 2.689060640647144
[2026-02-04 06:45:33] 2026-02-04 10:00:08,886 | INFO     | current chi2=2.689060640647144 (change=46.796330977186884 %)
[2026-02-04 06:45:33] 2026-02-04 10:00:08,887 | INFO     | sum of square deviations: 6519521876.333317
[2026-02-04 06:45:33] 2026-02-04 10:00:08,900 | INFO     | sum of deviations: 80213348316.00002
[2026-02-04 06:45:33] 2026-02-04 10:00:08,900 | INFO     | mean x: 1770189870.8333333
[2026-02-04 06:45:33] 2026-02-04 10:00:08,900 | INFO     | mean y: 2661306.086956522
[2026-02-04 06:45:33] 2026-02-04 10:00:08,900 | INFO     | intersect: -21776981340.724483
[2026-02-04 06:45:33] 2026-02-04 10:00:08,900 | INFO     | chi2: 2.690253644784231
[2026-02-04 06:45:33] 2026-02-04 10:00:08,901 | INFO     | current chi2=2.690253644784231 (change=-0.04436508865044535 %)
[2026-02-04 06:45:33] 2026-02-04 10:00:08,901 | INFO     | right removable region: 275
[2026-02-04 06:45:33] 2026-02-04 10:00:08,901 | INFO     | sum of square deviations: 7253895118.534948
[2026-02-04 06:45:33] 2026-02-04 10:00:08,903 | INFO     | sum of deviations: -148127956059.2972
[2026-02-04 06:45:33] 2026-02-04 10:00:08,904 | INFO     | mean x: 1770190480.8496504
[2026-02-04 06:45:33] 2026-02-04 10:00:08,904 | INFO     | mean y: 2627894.527972028
[2026-02-04 06:45:33] 2026-02-04 10:00:08,904 | INFO     | intersect: 36150751554.86042
[2026-02-04 06:45:33] 2026-02-04 10:00:08,904 | INFO     | chi2: 6.5774861069629535
[2026-02-04 06:45:33] 2026-02-04 10:00:08,904 | INFO     | current chi2=6.5774861069629535 (change=25.997917535883136 %)
[2026-02-04 06:45:33] 2026-02-04 10:00:08,905 | INFO     | sum of square deviations: 6879850562.939518
[2026-02-04 06:45:33] 2026-02-04 10:00:08,915 | INFO     | sum of deviations: -168136000522.40216
[2026-02-04 06:45:33] 2026-02-04 10:00:08,915 | INFO     | mean x: 1770190633.391459
[2026-02-04 06:45:33] 2026-02-04 10:00:08,915 | INFO     | mean y: 2636036.24911032
[2026-02-04 06:45:33] 2026-02-04 10:00:08,916 | INFO     | intersect: 43264153206.97814
[2026-02-04 06:45:33] 2026-02-04 10:00:08,916 | INFO     | chi2: 6.382436196884069
[2026-02-04 06:45:33] 2026-02-04 10:00:08,916 | INFO     | current chi2=6.382436196884069 (change=2.965417287197363 %)
[2026-02-04 06:45:33] 2026-02-04 10:00:08,916 | INFO     | left removable region: 20
[2026-02-04 06:45:33] 2026-02-04 10:00:08,917 | INFO     | sum of square deviations: 5141247103.231395
[2026-02-04 06:45:33] 2026-02-04 10:00:08,927 | INFO     | sum of deviations: -10901698072.568626
[2026-02-04 06:45:33] 2026-02-04 10:00:08,927 | INFO     | mean x: 1770190450.454902
[2026-02-04 06:45:33] 2026-02-04 10:00:08,928 | INFO     | mean y: 2701359.254901961
[2026-02-04 06:45:33] 2026-02-04 10:00:08,929 | INFO     | intersect: 3756281265.90329
[2026-02-04 06:45:33] 2026-02-04 10:00:08,929 | INFO     | chi2: 0.008638371411455513
[2026-02-04 06:45:33] 2026-02-04 10:00:08,929 | INFO     | current memory leak: -2.12 B/s (using 255 data points, chi2=0.01)
[2026-02-04 06:45:33] 2026-02-04 10:00:08,931 | INFO     | could have reported an average CPU frequency of 2600 MHz (13 samples)
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | ..............................
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | . Timing measurements:
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | . get job = 0 s
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | . initial setup = 36 s
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | . payload setup = 49 s
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | . stage-in = 0 s
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | . payload execution = 17745 s
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | . stage-out = 4 s
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | . log creation = 0 s
[2026-02-04 06:45:33] 2026-02-04 10:00:08,932 | INFO     | ..............................
[2026-02-04 06:45:33] 2026-02-04 10:00:09,249 | INFO     | 
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | job summary report
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | --------------------------------------------------
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | PanDA job id: 6995182163
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | task id: 48310749
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | errors: (none)
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | pilot state: finished 
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | transexitcode: 0
[2026-02-04 06:45:33] 2026-02-04 10:00:09,250 | INFO     | exeerrorcode: 0
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | exeerrordiag: 
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | exitcode: 0
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | exitmsg: OK
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | cpuconsumptiontime: 44523 s
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | nevents: 400
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | neventsw: 0
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | pid: 3259134
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | pgrp: 3259134
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | corecount: 12
[2026-02-04 06:45:33] 2026-02-04 10:00:09,251 | INFO     | event service: False
[2026-02-04 06:45:33] 2026-02-04 10:00:09,252 | INFO     | sizes: {0: 2277734, 1: 2277818, 2: 2278279, 17799: 2310546, 17804: 2319600, 17806: 2319738}
[2026-02-04 06:45:33] 2026-02-04 10:00:09,252 | INFO     | --------------------------------------------------
[2026-02-04 06:45:33] 2026-02-04 10:00:09,252 | INFO     | 
[2026-02-04 06:45:33] 2026-02-04 10:00:09,252 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-02-04 06:45:33] 2026-02-04 10:00:09,298 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,299 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,299 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,299 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,299 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,300 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,301 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 06:45:33] 2026-02-04 10:00:09,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,301 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 06:45:33] 2026-02-04 10:00:09,301 | INFO     | job 6995182163 has completed (purged errors)
[2026-02-04 06:45:33] 2026-02-04 10:00:09,301 | INFO     | overall cleanup function is called
[2026-02-04 06:45:33] 2026-02-04 10:00:10,313 | INFO     | --- collectZombieJob: --- 10, [3259134]
[2026-02-04 06:45:33] 2026-02-04 10:00:10,314 | INFO     | zombie collector waiting for pid 3259134
[2026-02-04 06:45:33] 2026-02-04 10:00:10,314 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 06:45:33] 2026-02-04 10:00:10,315 | INFO     | collected zombie processes
[2026-02-04 06:45:33] 2026-02-04 10:00:10,315 | INFO     | will attempt to kill all subprocesses of pid=3259134
[2026-02-04 06:45:33] 2026-02-04 10:00:10,826 | INFO     | process IDs to be killed: [3259134] (in reverse order)
[2026-02-04 06:45:33] 2026-02-04 10:00:10,944 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 06:45:33] 2026-02-04 10:00:10,944 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 06:45:33] 2026-02-04 10:00:10,952 | INFO     | did not find any defunct processes belonging to 3259134
[2026-02-04 06:45:33] 2026-02-04 10:00:10,960 | INFO     | did not find any defunct processes belonging to 3259134
[2026-02-04 06:45:33] 2026-02-04 10:00:10,960 | INFO     | ready for new job
[2026-02-04 06:45:33] 2026-02-04 10:00:10,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 06:45:33] 2026-02-04 10:00:10,962 | INFO     | **************************************
[2026-02-04 06:45:33] 2026-02-04 10:00:10,963 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 06:45:33] 2026-02-04 10:00:10,963 | INFO     | **************************************
[2026-02-04 06:45:33] 2026-02-04 10:00:10,963 | INFO     | 
[2026-02-04 06:45:33] 2026-02-04 10:00:10,965 | INFO     | architecture information:
[2026-02-04 06:45:33] 2026-02-04 10:00:10,965 | INFO     | executing command: cat /etc/os-release
[2026-02-04 06:45:33] 2026-02-04 10:00:10,998 | INFO     | cat /etc/os-release:
[2026-02-04 06:45:33] NAME="CentOS Linux"
[2026-02-04 06:45:33] VERSION="7 (Core)"
[2026-02-04 06:45:33] ID="centos"
[2026-02-04 06:45:33] ID_LIKE="rhel fedora"
[2026-02-04 06:45:33] VERSION_ID="7"
[2026-02-04 06:45:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 06:45:33] ANSI_COLOR="0;31"
[2026-02-04 06:45:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 06:45:33] HOME_URL="https://www.centos.org/"
[2026-02-04 06:45:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 06:45:33] 
[2026-02-04 06:45:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 06:45:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 06:45:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 06:45:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 06:45:33] 
[2026-02-04 06:45:33] 2026-02-04 10:00:10,999 | INFO     | **************************************
[2026-02-04 06:45:33] 2026-02-04 10:00:11,501 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-02-04 06:45:33] 2026-02-04 10:00:11,530 | INFO     | sufficient remaining disk space (50122981376 B)
[2026-02-04 06:45:33] 2026-02-04 10:00:11,531 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 06:45:33] 2026-02-04 10:00:11,531 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 06:45:33] 2026-02-04 10:00:11,531 | INFO     | update_server=False
[2026-02-04 06:45:33] 2026-02-04 10:00:11,531 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 06:45:33] 2026-02-04 10:00:11,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 06:45:33] 2026-02-04 10:00:11,574 | INFO     | aborting loop
[2026-02-04 06:45:33] 2026-02-04 10:00:11,789 | INFO     | all data control threads have been joined
[2026-02-04 06:45:33] 2026-02-04 10:00:12,009 | INFO     | all job control threads have been joined
[2026-02-04 06:45:33] 2026-02-04 10:00:12,292 | INFO     | all payload control threads have been joined
[2026-02-04 06:45:33] 2026-02-04 10:00:12,536 | INFO     | [job] retrieve thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:12,580 | INFO     | [job] job monitor thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:12,598 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:12,599 | INFO     | [data] copytool_in thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:12,755 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 06:45:33] 2026-02-04 10:00:12,795 | INFO     | [data] control thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:13,015 | INFO     | [job] control thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:13,121 | INFO     | [payload] validate_post thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:13,298 | INFO     | [payload] control thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:13,306 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:13,599 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:13,800 | INFO     | [job] validate thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:13,815 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:13,978 | INFO     | [payload] failed_post thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:14,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 06:45:33] 2026-02-04 10:00:14,264 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 06:45:33] 2026-02-04 10:00:14,762 | INFO     | [data] copytool_out thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:15,270 | INFO     | [job] queue monitor thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:18,216 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 06:45:33] 2026-02-04 10:00:42,433 | INFO     | PID=3252880 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 06:45:33] 2026-02-04 10:00:42,433 | INFO     | .. there are 8 such processes running
[2026-02-04 06:45:33] 2026-02-04 10:00:42,434 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 06:45:33] 2026-02-04 10:00:42,434 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 06:45:33] 2026-02-04 10:00:42,434 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 06:45:33] 2026-02-04 10:00:52,799 | INFO     | [monitor] cgroup control has ended
[2026-02-04 06:45:33] 2026-02-04 10:00:54,112 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506795939648)>', '<ExcThread(monitor, started 140506432534272)>']
[2026-02-04 06:45:33] 2026-02-04 10:00:54,507 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 06:45:33] 2026-02-04 10:00:54,507 | INFO     | [monitor] control thread has ended
[2026-02-04 06:45:33] 2026-02-04 10:00:59,139 | INFO     | all workflow threads have been joined
[2026-02-04 06:45:33] 2026-02-04 10:00:59,139 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 06:45:33] 2026-02-04 10:00:59,139 | INFO     | traces error code: 0
[2026-02-04 06:45:33] 2026-02-04 10:00:59,139 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 06:45:33] 2026-02-04 10:00:59,273 [wrapper] ==== pilot stdout END ====
[2026-02-04 06:45:33] 2026-02-04 10:00:59,292 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 06:45:33] 2026-02-04 10:00:59,308 [wrapper] pilotpid: 3252880
[2026-02-04 06:45:33] 2026-02-04 10:00:59,336 [wrapper] Pilot exit status: 0
[2026-02-04 06:45:33] 2026-02-04 10:00:59,474 [wrapper] pandaids: 6995182163
[2026-02-04 06:45:33] 2026-02-04 10:00:59,581 [wrapper] cleanup supervisor_pilot 3685641 3252881
[2026-02-04 06:45:33] 2026-02-04 10:00:59,594 [wrapper] Test setup, not cleaning
[2026-02-04 06:45:33] 2026-02-04 10:00:59,609 [wrapper] apfmon messages muted
[2026-02-04 06:45:33] 2026-02-04 10:00:59,642 [wrapper] ==== wrapper stdout END ====
[2026-02-04 06:45:33] 2026-02-04 10:00:59,664 [wrapper] ==== wrapper stderr END ====
[2026-02-04 06:45:33]  *** Error codes and diagnostics ***
[2026-02-04 06:45:33]     "exeErrorCode": 0,
[2026-02-04 06:45:33]     "exeErrorDiag": "",
[2026-02-04 06:45:33]     "pilotErrorCode": 0,
[2026-02-04 06:45:33]     "pilotErrorDiag": "",
[2026-02-04 06:45:33]  *** Listing of results directory ***
[2026-02-04 06:45:33] total 672876
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas    584422 Feb  3 22:08 pilot3.tar.gz
[2026-02-04 06:45:33] -rwx------. 1 boincer umatlas     36322 Feb  3 22:08 runpilot2-wrapper.sh
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 22:09 queuedata.json
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas       100 Feb  4 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 06:45:33] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  4 00:01 run_atlas
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas       105 Feb  4 00:01 job.xml
[2026-02-04 06:45:33] -rw-r--r--. 2 boincer umatlas 498315545 Feb  4 00:01 EVNT.48310747._000095.pool.root.1
[2026-02-04 06:45:33] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 00:01 start_atlas.sh
[2026-02-04 06:45:33] drwxrwx--x. 2 boincer umatlas      4096 Feb  4 00:01 shared
[2026-02-04 06:45:33] -rw-r--r--. 2 boincer umatlas    597748 Feb  4 00:01 input.tar.gz
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas         0 Feb  4 00:01 boinc_lockfile
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas      2523 Feb  4 00:01 pandaJob.out
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas        57 Feb  4 00:01 setup.sh.local
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas   1009236 Feb  4 00:02 agis_schedconf.cvmfs.json
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas       442 Feb  4 00:03 workernode_map.json
[2026-02-04 06:45:33] drwx------. 5 boincer umatlas      4096 Feb  4 00:03 pilot3
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas 181001654 Feb  4 04:52 HITS.48310749._004759.pool.root.1
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas       530 Feb  4 04:52 boinc_task_state.xml
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas      1040 Feb  4 04:59 memory_monitor_summary.json
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas   1511668 Feb  4 05:00 agis_ddmendpoints.agis.ALL.json
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas    594813 Feb  4 05:00 log.48310749._004759.job.log.tgz.1
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas      6395 Feb  4 05:00 heartbeat.json
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas        95 Feb  4 05:00 pilot_heartbeat.json
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas      4819 Feb  4 05:00 pilotlog.txt
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas   2285066 Feb  4 05:00 log.48310749._004759.job.log.1
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas       357 Feb  4 05:00 output.list
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas       620 Feb  4 05:01 runtime_log
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas   2897920 Feb  4 05:01 result.tar.gz
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas       656 Feb  4 05:01 ZRNLDmJRi78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm3XWKDmVCZOtm.diag
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas      9344 Feb  4 05:01 runtime_log.err
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas      6660 Feb  4 06:45 init_data.xml
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 06:45 boinc_mmap_file
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas        27 Feb  4 06:45 wrapper_checkpoint.txt
[2026-02-04 06:45:33] -rw-r--r--. 1 boincer umatlas     20965 Feb  4 06:45 stderr.txt
[2026-02-04 06:45:33] HITS file was successfully produced:
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas 181001654 Feb  4 04:52 shared/HITS.pool.root.1
[2026-02-04 06:45:33]  *** Contents of shared directory: ***
[2026-02-04 06:45:33] total 666840
[2026-02-04 06:45:33] -rw-r--r--. 2 boincer umatlas 498315545 Feb  4 00:01 ATLAS.root_0
[2026-02-04 06:45:33] -rw-r--r--. 2 boincer umatlas     15845 Feb  4 00:01 start_atlas.sh
[2026-02-04 06:45:33] -rw-r--r--. 2 boincer umatlas    597748 Feb  4 00:01 input.tar.gz
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas 181001654 Feb  4 04:52 HITS.pool.root.1
[2026-02-04 06:45:33] -rw-------. 1 boincer umatlas   2897920 Feb  4 05:01 result.tar.gz
06:45:35 (3248677): run_atlas exited; CPU time 44914.567000
06:45:35 (3248677): called boinc_finish(0)

</stderr_txt>
]]>

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