Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:10:59 (3176976): wrapper (7.7.26015): starting
11:10:59 (3176976): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 11:10:59] Arguments: --nthreads 4
[2026-02-04 11:10:59] Threads: 4
[2026-02-04 11:10:59] Checking for CVMFS
[2026-02-04 11:10:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 11:10:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 11:10:59] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 11:10:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 11:10:59] 2.13.1.0 3933141 9699 97616 155862 2 188 8472916 10240000 1822 130560 0 18573481 99.996 340114 295 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-04 11:10:59] CVMFS is ok
[2026-02-04 11:10:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 11:10:59] Checking for apptainer binary...
[2026-02-04 11:10:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 11:10:59] Running /usr/bin/apptainer --version
[2026-02-04 11:10:59] apptainer version 1.4.5
[2026-02-04 11:10:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 11:11:00] julianvlneu
[2026-02-04 11:11:00] apptainer works
[2026-02-04 11:11:00] Set ATHENA_PROC_NUMBER=4
[2026-02-04 11:11:00] Set ATHENA_CORE_NUMBER=4
[2026-02-04 11:11:00] Starting ATLAS job with PandaID=7000510472
[2026-02-04 11:11:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 12:08:32]  *** The last 200 lines of the pilot log: ***
[2026-02-04 12:08:32]  is_tar=False
[2026-02-04 12:08:32]  lfn=log.48317952._010864.job.log.tgz.1
[2026-02-04 12:08:32]  mtime=0
[2026-02-04 12:08:32]  protocol_id=None
[2026-02-04 12:08:32]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 12:08:32]  replicas=None
[2026-02-04 12:08:32]  scope=mc23_13p6TeV
[2026-02-04 12:08:32]  status=None
[2026-02-04 12:08:32]  status_code=0
[2026-02-04 12:08:32]  storage_token=
[2026-02-04 12:08:32]  surl=/var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7000510472/log.48317952._010864.job.log.tgz.1
[2026-02-04 12:08:32]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/f8/log.48317952._010864.job.log.tgz.1
[2026-02-04 12:08:32]  workdir=None
[2026-02-04 12:08:32] ]
[2026-02-04 12:08:32] 2026-02-04 11:07:56,651 | INFO     | transferring file log.48317952._010864.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7000510472/log.48317952._010864.job.log.tgz.1 to /var/li
[2026-02-04 12:08:32] 2026-02-04 11:07:56,651 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7000510472/log.48317952._010864.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-04 12:08:32] 2026-02-04 11:07:56,674 | INFO     | adding to output.list: log.48317952._010864.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/90/f8/log.48317952._010864.job.log.tg
[2026-02-04 12:08:32] 2026-02-04 11:07:56,675 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 12:08:32] 2026-02-04 11:07:56,675 | INFO     | summary of transferred files:
[2026-02-04 12:08:32] 2026-02-04 11:07:56,675 | INFO     |  -- lfn=log.48317952._010864.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 12:08:32] 2026-02-04 11:07:56,676 | INFO     | stage-out finished correctly
[2026-02-04 12:08:32] 2026-02-04 11:07:57,986 | WARNING  | process 3185551 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 12:08:32] 2026-02-04 11:07:57,987 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7000510472/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 12:08:32] 2026-02-04 11:07:58,101 | INFO     | number of running child processes to parent process 3185551: 1
[2026-02-04 12:08:32] 2026-02-04 11:07:58,102 | INFO     | maximum number of monitored processes: 6
[2026-02-04 12:08:32] 2026-02-04 11:07:58,464 | INFO     | time since job start (3398s) is within the limit (349056.0s)
[2026-02-04 12:08:32] 2026-02-04 11:07:58,731 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 12:08:32] 2026-02-04 11:07:59,585 | INFO     | PID=3181004 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 12:08:32] 2026-02-04 11:07:59,585 | INFO     | .. there are 3 such processes running
[2026-02-04 12:08:32] 2026-02-04 11:07:59,920 | INFO     | job 7000510472 has state=finished
[2026-02-04 12:08:32] 2026-02-04 11:07:59,920 | INFO     | preparing for final server update for job 7000510472 in state='finished'
[2026-02-04 12:08:32] 2026-02-04 11:07:59,920 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7000510472/jobReport.json
[2026-02-04 12:08:32] 2026-02-04 11:07:59,921 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/1/workernode_map.json
[2026-02-04 12:08:32] 2026-02-04 11:07:59,922 | INFO     | this job has now completed (state=finished)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,922 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,922 | INFO     | log transfer has been attempted: DONE
[2026-02-04 12:08:32] 2026-02-04 11:07:59,922 | INFO     | job 7000510472 has finished - writing final server update
[2026-02-04 12:08:32] 2026-02-04 11:07:59,922 | INFO     | total number of processed events: 400 (read)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,923 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/1/PanDA_Pilot-7000510472/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,923 | INFO     | extracted standard info from prmon json
[2026-02-04 12:08:32] 2026-02-04 11:07:59,923 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 12:08:32] 2026-02-04 11:07:59,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | INFO     | fitting pss+swap vs Time
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | INFO     | sum of square deviations: 36465800.0
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | INFO     | sum of deviations: -1485787430.9999998
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | INFO     | mean x: 1770201674.0
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | INFO     | mean y: 2391312.448979592
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | INFO     | intersect: 72128695892.7505
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | INFO     | chi2: 0.0069678144677920795
[2026-02-04 12:08:32] 2026-02-04 11:07:59,924 | INFO     | current memory leak: -40.74 B/s (using 49 data points, chi2=0.01)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | could have reported an average CPU frequency of 4399 MHz (5 samples)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | ..............................
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | . Timing measurements:
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | . get job = 0 s
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | . initial setup = 7 s
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | . payload setup = 7 s
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | . stage-in = 0 s
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | . payload execution = 3373 s
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | . stage-out = 0 s
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | . log creation = 0 s
[2026-02-04 12:08:32] 2026-02-04 11:07:59,925 | INFO     | ..............................
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | 
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | job summary report
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | --------------------------------------------------
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | PanDA job id: 7000510472
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | task id: 48317952
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | errors: (none)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | pilot state: finished 
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | transexitcode: 0
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | exeerrorcode: 0
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | exeerrordiag: 
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | exitcode: 0
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | exitmsg: OK
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | cpuconsumptiontime: 12631 s
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | nevents: 400
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | neventsw: 0
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | pid: 3185551
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | pgrp: 3185551
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | corecount: 4
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | event service: False
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | sizes: {0: 2277799, 1: 2278316, 11: 2278316, 3385: 2303869, 3386: 2312950, 3388: 2312950, 3389: 2313304}
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | --------------------------------------------------
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | 
[2026-02-04 12:08:32] 2026-02-04 11:07:59,948 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/1
[2026-02-04 12:08:32] 2026-02-04 11:07:59,970 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,970 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,970 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,970 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,970 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | job 7000510472 has completed (purged errors)
[2026-02-04 12:08:32] 2026-02-04 11:07:59,971 | INFO     | overall cleanup function is called
[2026-02-04 12:08:32] 2026-02-04 11:08:00,978 | INFO     | --- collectZombieJob: --- 10, [3185551]
[2026-02-04 12:08:32] 2026-02-04 11:08:00,978 | INFO     | zombie collector waiting for pid 3185551
[2026-02-04 12:08:32] 2026-02-04 11:08:00,979 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 12:08:32] 2026-02-04 11:08:00,979 | INFO     | collected zombie processes
[2026-02-04 12:08:32] 2026-02-04 11:08:00,979 | INFO     | will attempt to kill all subprocesses of pid=3185551
[2026-02-04 12:08:32] 2026-02-04 11:08:01,087 | INFO     | process IDs to be killed: [3185551] (in reverse order)
[2026-02-04 12:08:32] 2026-02-04 11:08:01,150 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 12:08:32] 2026-02-04 11:08:01,150 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 12:08:32] 2026-02-04 11:08:01,154 | INFO     | did not find any defunct processes belonging to 3185551
[2026-02-04 12:08:32] 2026-02-04 11:08:01,157 | INFO     | did not find any defunct processes belonging to 3185551
[2026-02-04 12:08:32] 2026-02-04 11:08:01,158 | INFO     | ready for new job
[2026-02-04 12:08:32] 2026-02-04 11:08:01,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 12:08:32] 2026-02-04 11:08:01,159 | INFO     | **************************************
[2026-02-04 12:08:32] 2026-02-04 11:08:01,159 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 12:08:32] 2026-02-04 11:08:01,159 | INFO     | **************************************
[2026-02-04 12:08:32] 2026-02-04 11:08:01,159 | INFO     | 
[2026-02-04 12:08:32] 2026-02-04 11:08:01,160 | INFO     | pilot is running in a VM
[2026-02-04 12:08:32] 2026-02-04 11:08:01,160 | INFO     | architecture information:
[2026-02-04 12:08:32] 2026-02-04 11:08:01,160 | INFO     | executing command: cat /etc/os-release
[2026-02-04 12:08:32] 2026-02-04 11:08:01,177 | INFO     | cat /etc/os-release:
[2026-02-04 12:08:32] NAME="CentOS Linux"
[2026-02-04 12:08:32] VERSION="7 (Core)"
[2026-02-04 12:08:32] ID="centos"
[2026-02-04 12:08:32] ID_LIKE="rhel fedora"
[2026-02-04 12:08:32] VERSION_ID="7"
[2026-02-04 12:08:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 12:08:32] ANSI_COLOR="0;31"
[2026-02-04 12:08:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 12:08:32] HOME_URL="https://www.centos.org/"
[2026-02-04 12:08:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 12:08:32] 
[2026-02-04 12:08:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 12:08:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 12:08:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 12:08:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 12:08:32] 
[2026-02-04 12:08:32] 2026-02-04 11:08:01,177 | INFO     | **************************************
[2026-02-04 12:08:32] 2026-02-04 11:08:01,681 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/1
[2026-02-04 12:08:32] 2026-02-04 11:08:01,695 | INFO     | sufficient remaining disk space (140530155520 B)
[2026-02-04 12:08:32] 2026-02-04 11:08:01,696 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 12:08:32] 2026-02-04 11:08:01,696 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 12:08:32] 2026-02-04 11:08:01,696 | INFO     | update_server=False
[2026-02-04 12:08:32] 2026-02-04 11:08:01,696 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 12:08:32] 2026-02-04 11:08:01,696 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 12:08:32] 2026-02-04 11:08:01,696 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 12:08:32] 2026-02-04 11:08:01,697 | INFO     | aborting loop
[2026-02-04 12:08:32] 2026-02-04 11:08:01,827 | INFO     | all data control threads have been joined
[2026-02-04 12:08:32] 2026-02-04 11:08:02,221 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 12:08:32] 2026-02-04 11:08:02,702 | INFO     | [job] retrieve thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:02,702 | INFO     | [job] job monitor thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:02,703 | INFO     | [job] queue monitor thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:02,777 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:02,833 | INFO     | [data] control thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:02,894 | INFO     | all job control threads have been joined
[2026-02-04 12:08:32] 2026-02-04 11:08:03,132 | INFO     | all payload control threads have been joined
[2026-02-04 12:08:32] 2026-02-04 11:08:03,226 | INFO     | [job] validate thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:03,244 | INFO     | [payload] failed_post thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:03,365 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:03,376 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:03,558 | INFO     | [data] copytool_in thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:03,773 | INFO     | [payload] validate_post thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:03,900 | INFO     | [job] control thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:04,138 | INFO     | [payload] control thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:04,227 | INFO     | [data] copytool_out thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:04,764 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 12:08:32] 2026-02-04 11:08:08,770 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:11,820 | INFO     | job.realtimelogging is not enabled
[2026-02-04 12:08:32] 2026-02-04 11:08:12,826 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 12:08:32] 2026-02-04 11:08:24,322 | INFO     | [monitor] cgroup control has ended
[2026-02-04 12:08:32] 2026-02-04 11:08:25,590 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135261049825088)>', '<ExcThread(monitor, started 135260230629120)>']
[2026-02-04 12:08:32] 2026-02-04 11:08:30,616 | INFO     | all workflow threads have been joined
[2026-02-04 12:08:32] 2026-02-04 11:08:30,616 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 12:08:32] 2026-02-04 11:08:30,616 | INFO     | traces error code: 0
[2026-02-04 12:08:32] 2026-02-04 11:08:30,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 12:08:32] 2026-02-04 11:08:31,807 | INFO     | PID=3181004 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 12:08:32] 2026-02-04 11:08:31,808 | INFO     | .. there are 3 such processes running
[2026-02-04 12:08:32] 2026-02-04 11:08:31,808 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 12:08:32] 2026-02-04 11:08:31,808 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 12:08:32] 2026-02-04 11:08:31,808 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 12:08:32] 2026-02-04 11:08:31,808 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 12:08:32] 2026-02-04 11:08:31,808 | INFO     | [monitor] control thread has ended
[2026-02-04 12:08:32] 2026-02-04 11:08:31,898 [wrapper] ==== pilot stdout END ====
[2026-02-04 12:08:32] 2026-02-04 11:08:31,903 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 12:08:32] 2026-02-04 11:08:31,909 [wrapper] pilotpid: 3181004
[2026-02-04 12:08:32] 2026-02-04 11:08:31,913 [wrapper] Pilot exit status: 0
[2026-02-04 12:08:32] 2026-02-04 11:08:31,933 [wrapper] pandaids: 7000510472
[2026-02-04 12:08:32] 2026-02-04 11:08:31,981 [wrapper] cleanup supervisor_pilot 3221150 3181005
[2026-02-04 12:08:32] 2026-02-04 11:08:31,986 [wrapper] Test setup, not cleaning
[2026-02-04 12:08:32] 2026-02-04 11:08:31,991 [wrapper] apfmon messages muted
[2026-02-04 12:08:32] 2026-02-04 11:08:31,996 [wrapper] ==== wrapper stdout END ====
[2026-02-04 12:08:32] 2026-02-04 11:08:32,004 [wrapper] ==== wrapper stderr END ====
[2026-02-04 12:08:32]  *** Error codes and diagnostics ***
[2026-02-04 12:08:32]     "exeErrorCode": 0,
[2026-02-04 12:08:32]     "exeErrorDiag": "",
[2026-02-04 12:08:32]     "pilotErrorCode": 0,
[2026-02-04 12:08:32]     "pilotErrorDiag": "",
[2026-02-04 12:08:32]  *** Listing of results directory ***
[2026-02-04 12:08:32] insgesamt 674764
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc    584422 Feb  4 00:41 pilot3.tar.gz
[2026-02-04 12:08:32] -rwx------ 1 yeti boinc     36322 Feb  4 00:41 runpilot2-wrapper.sh
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc      5111 Feb  4 00:42 queuedata.json
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc       100 Feb  4 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 12:08:32] -rwxr-xr-x 1 yeti boinc      7986 Feb  4 11:10 run_atlas
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc       105 Feb  4 11:10 job.xml
[2026-02-04 12:08:32] -rw-r--r-- 2 yeti boinc 504790224 Feb  4 11:10 EVNT.48317949._000204.pool.root.1
[2026-02-04 12:08:32] -rw-r--r-- 2 yeti boinc     15845 Feb  4 11:10 start_atlas.sh
[2026-02-04 12:08:32] drwxrwx--x 2 yeti boinc      4096 Feb  4 11:10 shared
[2026-02-04 12:08:32] -rw-r--r-- 2 yeti boinc    597750 Feb  4 11:10 input.tar.gz
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc      6732 Feb  4 11:10 init_data.xml
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc         0 Feb  4 11:10 boinc_setup_complete
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc         0 Feb  4 11:10 boinc_lockfile
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc      2523 Feb  4 11:11 pandaJob.out
[2026-02-04 12:08:32] -rw------- 1 yeti boinc        52 Feb  4 11:11 setup.sh.local
[2026-02-04 12:08:32] -rw------- 1 yeti boinc   1009236 Feb  4 11:11 agis_schedconf.cvmfs.json
[2026-02-04 12:08:32] -rw------- 1 yeti boinc   1511668 Feb  4 11:11 agis_ddmendpoints.agis.ALL.json
[2026-02-04 12:08:32] -rw------- 1 yeti boinc       425 Feb  4 11:11 workernode_map.json
[2026-02-04 12:08:32] drwx------ 5 yeti boinc      4096 Feb  4 11:11 pilot3
[2026-02-04 12:08:32] -rw------- 1 yeti boinc 180683224 Feb  4 12:07 HITS.48317952._010864.pool.root.1
[2026-02-04 12:08:32] -rw------- 1 yeti boinc        95 Feb  4 12:07 pilot_heartbeat.json
[2026-02-04 12:08:32] -rw------- 1 yeti boinc      1015 Feb  4 12:07 memory_monitor_summary.json
[2026-02-04 12:08:32] -rw------- 1 yeti boinc    243789 Feb  4 12:07 log.48317952._010864.job.log.tgz.1
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc       530 Feb  4 12:07 boinc_task_state.xml
[2026-02-04 12:08:32] -rw------- 1 yeti boinc      6294 Feb  4 12:07 heartbeat.json
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc      8192 Feb  4 12:08 boinc_mmap_file
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc        27 Feb  4 12:08 wrapper_checkpoint.txt
[2026-02-04 12:08:32] -rw------- 1 yeti boinc       822 Feb  4 12:08 pilotlog.txt
[2026-02-04 12:08:32] -rw------- 1 yeti boinc    525970 Feb  4 12:08 log.48317952._010864.job.log.1
[2026-02-04 12:08:32] -rw------- 1 yeti boinc       357 Feb  4 12:08 output.list
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc       620 Feb  4 12:08 runtime_log
[2026-02-04 12:08:32] -rw------- 1 yeti boinc    788480 Feb  4 12:08 result.tar.gz
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc      9556 Feb  4 12:08 runtime_log.err
[2026-02-04 12:08:32] -rw------- 1 yeti boinc       640 Feb  4 12:08 psGNDmvCf78n9Rq4apOajLDm4fhM0noT9bVooX4SDmqgVKDmaRcIcn.diag
[2026-02-04 12:08:32] -rw-r--r-- 1 yeti boinc     21404 Feb  4 12:08 stderr.txt
[2026-02-04 12:08:32] HITS file was successfully produced:
[2026-02-04 12:08:32] -rw------- 1 yeti boinc 180683224 Feb  4 12:07 shared/HITS.pool.root.1
[2026-02-04 12:08:32]  *** Contents of shared directory: ***
[2026-02-04 12:08:32] insgesamt 670792
[2026-02-04 12:08:32] -rw-r--r-- 2 yeti boinc 504790224 Feb  4 11:10 ATLAS.root_0
[2026-02-04 12:08:32] -rw-r--r-- 2 yeti boinc     15845 Feb  4 11:10 start_atlas.sh
[2026-02-04 12:08:32] -rw-r--r-- 2 yeti boinc    597750 Feb  4 11:10 input.tar.gz
[2026-02-04 12:08:32] -rw------- 1 yeti boinc 180683224 Feb  4 12:07 HITS.pool.root.1
[2026-02-04 12:08:32] -rw------- 1 yeti boinc    788480 Feb  4 12:08 result.tar.gz
12:08:33 (3176976): run_atlas exited; CPU time 12718.776272
12:08:33 (3176976): called boinc_finish(0)

</stderr_txt>
]]>

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