Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:22:33 (307753): wrapper (7.7.26015): starting
17:22:33 (307753): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 17:22:33] Arguments: --nthreads 4
[2026-02-04 17:22:33] Threads: 4
[2026-02-04 17:22:33] Checking for CVMFS
[2026-02-04 17:22:33] No cvmfs_config command found, will try listing directly
[2026-02-04 17:22:33] CVMFS is ok
[2026-02-04 17:22:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 17:22:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 17:22:33] Further information can be found at the LHC@home message board.
[2026-02-04 17:22:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 17:22:33] Checking for apptainer binary...
[2026-02-04 17:22:33] which: no apptainer in ((null))
[2026-02-04 17:22:33] apptainer is not installed, using version from CVMFS
[2026-02-04 17:22:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 17:22:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-02-04 17:22:34] apptainer works
[2026-02-04 17:22:34] Set ATHENA_PROC_NUMBER=4
[2026-02-04 17:22:34] Set ATHENA_CORE_NUMBER=4
[2026-02-04 17:22:34] Starting ATLAS job with PandaID=7000476697
[2026-02-04 17:22:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:33:32 (380138): wrapper (7.7.26015): starting
18:33:32 (380138): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 18:33:32] Arguments: --nthreads 4
[2026-02-04 18:33:32] Threads: 4
[2026-02-04 18:33:32] This job has been restarted, cleaning up previous attempt
[2026-02-04 18:33:32] Checking for CVMFS
[2026-02-04 18:33:32] No cvmfs_config command found, will try listing directly
[2026-02-04 18:33:32] CVMFS is ok
[2026-02-04 18:33:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 18:33:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 18:33:32] Further information can be found at the LHC@home message board.
[2026-02-04 18:33:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 18:33:32] Checking for apptainer binary...
[2026-02-04 18:33:32] which: no apptainer in ((null))
[2026-02-04 18:33:32] apptainer is not installed, using version from CVMFS
[2026-02-04 18:33:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 18:33:32] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot44/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-02-04 18:33:32] apptainer works
[2026-02-04 18:33:32] Set ATHENA_PROC_NUMBER=4
[2026-02-04 18:33:32] Set ATHENA_CORE_NUMBER=4
[2026-02-04 18:33:32] Starting ATLAS job with PandaID=7000476697
[2026-02-04 18:33:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot44/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 22:05:48]  *** The last 200 lines of the pilot log: ***
[2026-02-04 22:05:48] 2026-02-04 20:49:00,803 | INFO     | job 7000476697 has state=finished
[2026-02-04 22:05:48] 2026-02-04 20:49:00,804 | INFO     | preparing for final server update for job 7000476697 in state='finished'
[2026-02-04 22:05:48] 2026-02-04 20:49:00,804 | INFO     | reading metadata from: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7000476697/jobReport.json
[2026-02-04 22:05:48] 2026-02-04 20:49:00,806 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot44/slots/0/workernode_map.json
[2026-02-04 22:05:48] 2026-02-04 20:49:00,807 | INFO     | this job has now completed (state=finished)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,807 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,807 | INFO     | log transfer has been attempted: DONE
[2026-02-04 22:05:48] 2026-02-04 20:49:00,807 | INFO     | job 7000476697 has finished - writing final server update
[2026-02-04 22:05:48] 2026-02-04 20:49:00,807 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_364343/.job.ad'
[2026-02-04 22:05:48] 2026-02-04 20:49:00,807 | INFO     | total number of processed events: 400 (read)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,819 | INFO     | using path: /scratch/boinc/var/slot44/slots/0/PanDA_Pilot-7000476697/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,819 | INFO     | extracted standard info from prmon json
[2026-02-04 22:05:48] 2026-02-04 20:49:00,820 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 22:05:48] 2026-02-04 20:49:00,820 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 22:05:48] 2026-02-04 20:49:00,820 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 22:05:48] 2026-02-04 20:49:00,820 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 22:05:48] 2026-02-04 20:49:00,824 | INFO     | fitting pss+swap vs Time
[2026-02-04 22:05:48] 2026-02-04 20:49:00,824 | INFO     | sum of square deviations: 2194675568.0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,825 | INFO     | sum of deviations: 17956110731.0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,825 | INFO     | mean x: 1770232267.5
[2026-02-04 22:05:48] 2026-02-04 20:49:00,825 | INFO     | mean y: 2321684.46875
[2026-02-04 22:05:48] 2026-02-04 20:49:00,826 | INFO     | intersect: -14481134129.360775
[2026-02-04 22:05:48] 2026-02-04 20:49:00,826 | INFO     | chi2: 1.3628488857085803
[2026-02-04 22:05:48] 2026-02-04 20:49:00,826 | INFO     | sum of square deviations: 2027639878.0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,827 | INFO     | sum of deviations: 17456325592.0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,827 | INFO     | mean x: 1770232115.0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,827 | INFO     | mean y: 2321228.3155080215
[2026-02-04 22:05:48] 2026-02-04 20:49:00,828 | INFO     | intersect: -15237933467.866192
[2026-02-04 22:05:48] 2026-02-04 20:49:00,828 | INFO     | chi2: 1.3637817913976766
[2026-02-04 22:05:48] 2026-02-04 20:49:00,828 | INFO     | current chi2=1.3637817913976766 (change=-0.06845261414373742 %)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,828 | INFO     | right removable region: 186
[2026-02-04 22:05:48] 2026-02-04 20:49:00,828 | INFO     | sum of square deviations: 2027639878.0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,829 | INFO     | sum of deviations: -7557069180.000001
[2026-02-04 22:05:48] 2026-02-04 20:49:00,829 | INFO     | mean x: 1770232420.0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,830 | INFO     | mean y: 2344684.8395721926
[2026-02-04 22:05:48] 2026-02-04 20:49:00,830 | INFO     | intersect: 6600049241.634059
[2026-02-04 22:05:48] 2026-02-04 20:49:00,830 | INFO     | chi2: 0.011760432308115387
[2026-02-04 22:05:48] 2026-02-04 20:49:00,830 | INFO     | current chi2=0.011760432308115387 (change=99.13706996927978 %)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,830 | INFO     | sum of square deviations: 1869302025.5
[2026-02-04 22:05:48] 2026-02-04 20:49:00,831 | INFO     | sum of deviations: -6914014256.0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,832 | INFO     | mean x: 1770232572.5
[2026-02-04 22:05:48] 2026-02-04 20:49:00,832 | INFO     | mean y: 2344063.3736263737
[2026-02-04 22:05:48] 2026-02-04 20:49:00,832 | INFO     | intersect: 6549928710.336581
[2026-02-04 22:05:48] 2026-02-04 20:49:00,832 | INFO     | chi2: 0.011718084242096598
[2026-02-04 22:05:48] 2026-02-04 20:49:00,832 | INFO     | current chi2=0.011718084242096598 (change=0.3600893649935478 %)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,832 | INFO     | left removable region: 20
[2026-02-04 22:05:48] 2026-02-04 20:49:00,833 | INFO     | sum of square deviations: 1418361477.5
[2026-02-04 22:05:48] 2026-02-04 20:49:00,834 | INFO     | sum of deviations: -4195568775.9999995
[2026-02-04 22:05:48] 2026-02-04 20:49:00,834 | INFO     | mean x: 1770232694.5
[2026-02-04 22:05:48] 2026-02-04 20:49:00,834 | INFO     | mean y: 2341396.879518072
[2026-02-04 22:05:48] 2026-02-04 20:49:00,834 | INFO     | intersect: 5238759007.705773
[2026-02-04 22:05:48] 2026-02-04 20:49:00,834 | INFO     | chi2: 0.00976359172751225
[2026-02-04 22:05:48] 2026-02-04 20:49:00,834 | INFO     | current memory leak: -2.96 B/s (using 166 data points, chi2=0.01)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,835 | INFO     | could have reported an average CPU frequency of 2572 MHz (10 samples)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,835 | INFO     | ..............................
[2026-02-04 22:05:48] 2026-02-04 20:49:00,835 | INFO     | . Timing measurements:
[2026-02-04 22:05:48] 2026-02-04 20:49:00,835 | INFO     | . get job = 0 s
[2026-02-04 22:05:48] 2026-02-04 20:49:00,835 | INFO     | . initial setup = 1 s
[2026-02-04 22:05:48] 2026-02-04 20:49:00,835 | INFO     | . payload setup = 5 s
[2026-02-04 22:05:48] 2026-02-04 20:49:00,835 | INFO     | . stage-in = 0 s
[2026-02-04 22:05:48] 2026-02-04 20:49:00,836 | INFO     | . payload execution = 11697 s
[2026-02-04 22:05:48] 2026-02-04 20:49:00,836 | INFO     | . stage-out = 1 s
[2026-02-04 22:05:48] 2026-02-04 20:49:00,836 | INFO     | . log creation = 0 s
[2026-02-04 22:05:48] 2026-02-04 20:49:00,836 | INFO     | ..............................
[2026-02-04 22:05:48] 2026-02-04 20:49:00,927 | INFO     | 
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | job summary report
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | --------------------------------------------------
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | PanDA job id: 7000476697
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | task id: 48317892
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | errors: (none)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | pilot state: finished 
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | transexitcode: 0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,928 | INFO     | exeerrorcode: 0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | exeerrordiag: 
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | exitcode: 0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | exitmsg: OK
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | cpuconsumptiontime: 44994 s
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | nevents: 400
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | neventsw: 0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | pid: 392889
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | pgrp: 392889
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | corecount: 4
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | event service: False
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | sizes: {0: 2277801, 1: 2278262, 11: 2278262, 11706: 2307757, 11708: 2316971}
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | --------------------------------------------------
[2026-02-04 22:05:48] 2026-02-04 20:49:00,929 | INFO     | 
[2026-02-04 22:05:48] 2026-02-04 20:49:00,930 | INFO     | executing command: ls -lF /scratch/boinc/var/slot44/slots/0
[2026-02-04 22:05:48] 2026-02-04 20:49:00,950 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,950 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,950 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,950 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,950 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,950 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,950 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,951 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,952 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 22:05:48] 2026-02-04 20:49:00,952 | INFO     | job 7000476697 has completed (purged errors)
[2026-02-04 22:05:48] 2026-02-04 20:49:00,952 | INFO     | overall cleanup function is called
[2026-02-04 22:05:48] 2026-02-04 20:49:01,959 | INFO     | --- collectZombieJob: --- 10, [392889]
[2026-02-04 22:05:48] 2026-02-04 20:49:01,960 | INFO     | zombie collector waiting for pid 392889
[2026-02-04 22:05:48] 2026-02-04 20:49:01,960 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 22:05:48] 2026-02-04 20:49:01,960 | INFO     | collected zombie processes
[2026-02-04 22:05:48] 2026-02-04 20:49:01,960 | INFO     | will attempt to kill all subprocesses of pid=392889
[2026-02-04 22:05:48] 2026-02-04 20:49:02,307 | INFO     | process IDs to be killed: [392889] (in reverse order)
[2026-02-04 22:05:48] 2026-02-04 20:49:02,408 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 22:05:48] 2026-02-04 20:49:02,409 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 22:05:48] 2026-02-04 20:49:02,421 | INFO     | did not find any defunct processes belonging to 392889
[2026-02-04 22:05:48] 2026-02-04 20:49:02,432 | INFO     | did not find any defunct processes belonging to 392889
[2026-02-04 22:05:48] 2026-02-04 20:49:02,432 | INFO     | ready for new job
[2026-02-04 22:05:48] 2026-02-04 20:49:02,432 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 22:05:48] 2026-02-04 20:49:02,435 | INFO     | **************************************
[2026-02-04 22:05:48] 2026-02-04 20:49:02,435 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 22:05:48] 2026-02-04 20:49:02,435 | INFO     | **************************************
[2026-02-04 22:05:48] 2026-02-04 20:49:02,435 | INFO     | 
[2026-02-04 22:05:48] 2026-02-04 20:49:02,439 | INFO     | architecture information:
[2026-02-04 22:05:48] 2026-02-04 20:49:02,439 | INFO     | executing command: cat /etc/os-release
[2026-02-04 22:05:48] 2026-02-04 20:49:02,454 | INFO     | cat /etc/os-release:
[2026-02-04 22:05:48] NAME="CentOS Linux"
[2026-02-04 22:05:48] VERSION="7 (Core)"
[2026-02-04 22:05:48] ID="centos"
[2026-02-04 22:05:48] ID_LIKE="rhel fedora"
[2026-02-04 22:05:48] VERSION_ID="7"
[2026-02-04 22:05:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 22:05:48] ANSI_COLOR="0;31"
[2026-02-04 22:05:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 22:05:48] HOME_URL="https://www.centos.org/"
[2026-02-04 22:05:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 22:05:48] 
[2026-02-04 22:05:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 22:05:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 22:05:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 22:05:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 22:05:48] 
[2026-02-04 22:05:48] 2026-02-04 20:49:02,455 | INFO     | **************************************
[2026-02-04 22:05:48] 2026-02-04 20:49:02,958 | INFO     | executing command: df -mP /scratch/boinc/var/slot44/slots/0
[2026-02-04 22:05:48] 2026-02-04 20:49:02,973 | INFO     | sufficient remaining disk space (645572591616 B)
[2026-02-04 22:05:48] 2026-02-04 20:49:02,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 22:05:48] 2026-02-04 20:49:02,974 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 22:05:48] 2026-02-04 20:49:02,974 | INFO     | update_server=False
[2026-02-04 22:05:48] 2026-02-04 20:49:02,974 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 22:05:48] 2026-02-04 20:49:02,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 22:05:48] 2026-02-04 20:49:02,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 22:05:48] 2026-02-04 20:49:02,975 | INFO     | aborting loop
[2026-02-04 22:05:48] 2026-02-04 20:49:03,115 | INFO     | all data control threads have been joined
[2026-02-04 22:05:48] 2026-02-04 20:49:03,485 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 22:05:48] 2026-02-04 20:49:03,979 | INFO     | [job] job monitor thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:03,980 | INFO     | [job] retrieve thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:04,115 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:04,120 | INFO     | [data] control thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:04,211 | INFO     | all payload control threads have been joined
[2026-02-04 22:05:48] 2026-02-04 20:49:04,307 | INFO     | [job] validate thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:04,400 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:04,514 | INFO     | all job control threads have been joined
[2026-02-04 22:05:48] 2026-02-04 20:49:04,786 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:04,843 | INFO     | [data] copytool_in thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:04,885 | INFO     | job.realtimelogging is not enabled
[2026-02-04 22:05:48] 2026-02-04 20:49:05,193 | INFO     | [payload] validate_post thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:05,217 | INFO     | [payload] control thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:05,294 | INFO     | [payload] failed_post thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:05,489 | INFO     | [data] copytool_out thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:05,520 | INFO     | [job] control thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:05,892 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:05,938 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 22:05:48] 2026-02-04 20:49:06,944 | INFO     | [job] queue monitor thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:06,979 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 22:05:48] 2026-02-04 20:49:32,571 | INFO     | PID=384045 has CPU usage=6.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 22:05:48] 2026-02-04 20:49:32,571 | INFO     | .. there are 6 such processes running
[2026-02-04 22:05:48] 2026-02-04 20:49:32,571 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 22:05:48] 2026-02-04 20:49:32,571 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 22:05:48] 2026-02-04 20:49:32,572 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 22:05:48] 2026-02-04 20:50:00,251 | INFO     | [monitor] cgroup control has ended
[2026-02-04 22:05:48] 2026-02-04 20:50:01,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22814884489024)>', '<ExcThread(monitor, started 22814651594496)>']
[2026-02-04 22:05:48] 2026-02-04 20:50:01,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 22:05:48] 2026-02-04 20:50:01,713 | INFO     | [monitor] control thread has ended
[2026-02-04 22:05:48] 2026-02-04 20:50:06,061 | INFO     | all workflow threads have been joined
[2026-02-04 22:05:48] 2026-02-04 20:50:06,062 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 22:05:48] 2026-02-04 20:50:06,063 | INFO     | traces error code: 0
[2026-02-04 22:05:48] 2026-02-04 20:50:06,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 22:05:48] 2026-02-04 20:50:06,225 [wrapper] ==== pilot stdout END ====
[2026-02-04 22:05:48] 2026-02-04 20:50:06,228 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 22:05:48] 2026-02-04 20:50:06,230 [wrapper] pilotpid: 384045
[2026-02-04 22:05:48] 2026-02-04 20:50:06,232 [wrapper] Pilot exit status: 0
[2026-02-04 22:05:48] 2026-02-04 20:50:06,240 [wrapper] pandaids: 7000476697 7000476697
[2026-02-04 22:05:48] 2026-02-04 20:50:06,309 [wrapper] cleanup supervisor_pilot  526671 384046
[2026-02-04 22:05:48] 2026-02-04 20:50:06,311 [wrapper] Test setup, not cleaning
[2026-02-04 22:05:48] 2026-02-04 20:50:06,314 [wrapper] apfmon messages muted
[2026-02-04 22:05:48] 2026-02-04 20:50:06,316 [wrapper] ==== wrapper stdout END ====
[2026-02-04 22:05:48] 2026-02-04 20:50:06,318 [wrapper] ==== wrapper stderr END ====
[2026-02-04 22:05:48]  *** Error codes and diagnostics ***
[2026-02-04 22:05:48]     "exeErrorCode": 0,
[2026-02-04 22:05:48]     "exeErrorDiag": "",
[2026-02-04 22:05:48]     "pilotErrorCode": 0,
[2026-02-04 22:05:48]     "pilotErrorDiag": "",
[2026-02-04 22:05:48]  *** Listing of results directory ***
[2026-02-04 22:05:48] total 1159364
[2026-02-04 22:05:48] drwx------ 5 boinc boinc      4096 Jan 14 11:00 pilot3
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc    584422 Feb  4 00:41 pilot3.tar.gz
[2026-02-04 22:05:48] -rwx------ 1 boinc boinc     36322 Feb  4 00:41 runpilot2-wrapper.sh
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc      5111 Feb  4 00:42 queuedata.json
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc       100 Feb  4 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 22:05:48] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 17:22 run_atlas
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc       105 Feb  4 17:22 job.xml
[2026-02-04 22:05:48] -rw-r--r-- 3 boinc boinc 496028827 Feb  4 17:22 EVNT.48317889._000276.pool.root.1
[2026-02-04 22:05:48] -rw-r--r-- 3 boinc boinc 496028827 Feb  4 17:22 ATLAS.root_0
[2026-02-04 22:05:48] drwxrwx--x 2 boinc boinc      4096 Feb  4 17:22 shared
[2026-02-04 22:05:48] -rw-r--r-- 2 boinc boinc    597749 Feb  4 17:22 input.tar.gz
[2026-02-04 22:05:48] -rw-r--r-- 2 boinc boinc     15845 Feb  4 17:22 start_atlas.sh
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc         0 Feb  4 17:22 boinc_lockfile
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc      6642 Feb  4 18:33 init_data.xml
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc      2522 Feb  4 18:33 pandaJob.out
[2026-02-04 22:05:48] -rw------- 1 boinc boinc   1009544 Feb  4 18:33 agis_schedconf.cvmfs.json
[2026-02-04 22:05:48] -rw------- 1 boinc boinc       447 Feb  4 18:33 workernode_map.json
[2026-02-04 22:05:48] -rw------- 1 boinc boinc 187141836 Feb  4 21:48 HITS.48317892._014395.pool.root.1
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc       529 Feb  4 21:48 boinc_task_state.xml
[2026-02-04 22:05:48] -rw------- 1 boinc boinc        97 Feb  4 21:48 pilot_heartbeat.json
[2026-02-04 22:05:48] -rw------- 1 boinc boinc      1036 Feb  4 21:48 memory_monitor_summary.json
[2026-02-04 22:05:48] -rw------- 1 boinc boinc   1511668 Feb  4 21:48 agis_ddmendpoints.agis.ALL.json
[2026-02-04 22:05:48] -rw------- 1 boinc boinc    365824 Feb  4 21:49 log.48317892._014395.job.log.tgz.1
[2026-02-04 22:05:48] -rw------- 1 boinc boinc      6405 Feb  4 21:49 heartbeat.json
[2026-02-04 22:05:48] -rw------- 1 boinc boinc      4900 Feb  4 21:50 pilotlog.txt
[2026-02-04 22:05:48] -rw------- 1 boinc boinc   1655730 Feb  4 21:50 log.48317892._014395.job.log.1
[2026-02-04 22:05:48] -rw------- 1 boinc boinc       357 Feb  4 21:50 output.list
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc       620 Feb  4 21:50 runtime_log
[2026-02-04 22:05:48] -rw------- 1 boinc boinc   2037760 Feb  4 21:50 result.tar.gz
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc      9282 Feb  4 21:50 runtime_log.err
[2026-02-04 22:05:48] -rw------- 1 boinc boinc       790 Feb  4 21:50 LQqLDmkCf78n9Rq4apOajLDm4fhM0noT9bVooX4SDmUgVKDm9OTtrm.diag
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc        26 Feb  4 22:05 wrapper_checkpoint.txt
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc      8192 Feb  4 22:05 boinc_mmap_file
[2026-02-04 22:05:48] -rw-r--r-- 1 boinc boinc     22976 Feb  4 22:05 stderr.txt
[2026-02-04 22:05:48] HITS file was successfully produced:
[2026-02-04 22:05:48] -rw------- 1 boinc boinc 187141836 Feb  4 21:48 shared/HITS.pool.root.1
[2026-02-04 22:05:48]  *** Contents of shared directory: ***
[2026-02-04 22:05:48] total 669760
[2026-02-04 22:05:48] -rw-r--r-- 3 boinc boinc 496028827 Feb  4 17:22 ATLAS.root_0
[2026-02-04 22:05:48] -rw-r--r-- 2 boinc boinc    597749 Feb  4 17:22 input.tar.gz
[2026-02-04 22:05:48] -rw-r--r-- 2 boinc boinc     15845 Feb  4 17:22 start_atlas.sh
[2026-02-04 22:05:48] -rw------- 1 boinc boinc 187141836 Feb  4 21:48 HITS.pool.root.1
[2026-02-04 22:05:48] -rw------- 1 boinc boinc   2037760 Feb  4 21:50 result.tar.gz
22:05:49 (380138): run_atlas exited; CPU time 45501.435481
22:05:49 (380138): called boinc_finish(0)

</stderr_txt>
]]>

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