Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:45:19 (2748795): wrapper (7.7.26015): starting
13:45:19 (2748795): wrapper: running run_atlas (--nthreads 2)
[2026-02-04 13:45:19] Arguments: --nthreads 2
[2026-02-04 13:45:19] Threads: 2
[2026-02-04 13:45:19] Checking for CVMFS
[2026-02-04 13:45:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 13:45:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 13:45:20] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 13:45:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 13:45:20] 2.9.2.0 1787973 9832 69932 155866 3 50 30077986 36864000 0 130560 0 2897835 99.978 338007 6524 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-04 13:45:20] CVMFS is ok
[2026-02-04 13:45:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 13:45:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 13:45:20] Further information can be found at the LHC@home message board.
[2026-02-04 13:45:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 13:45:20] Checking for apptainer binary...
[2026-02-04 13:45:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 13:45:20] Running /usr/bin/apptainer --version
[2026-02-04 13:45:20] apptainer version 1.4.1-1.1
[2026-02-04 13:45:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 13:45:20] magicA244
[2026-02-04 13:45:20] apptainer works
[2026-02-04 13:45:20] Set ATHENA_PROC_NUMBER=2
[2026-02-04 13:45:20] Set ATHENA_CORE_NUMBER=2
[2026-02-04 13:45:20] Starting ATLAS job with PandaID=7000476487
[2026-02-04 13:45:20] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 15:59:58]  *** The last 200 lines of the pilot log: ***
[2026-02-04 15:59:58] 2026-02-04 14:59:03,265 | INFO     | 
[2026-02-04 15:59:58] 2026-02-04 14:59:03,265 | INFO     | architecture information:
[2026-02-04 15:59:58] 2026-02-04 14:59:03,266 | INFO     | executing command: cat /etc/os-release
[2026-02-04 15:59:58] 2026-02-04 14:59:03,274 | INFO     | cat /etc/os-release:
[2026-02-04 15:59:58] NAME="CentOS Linux"
[2026-02-04 15:59:58] VERSION="7 (Core)"
[2026-02-04 15:59:58] ID="centos"
[2026-02-04 15:59:58] ID_LIKE="rhel fedora"
[2026-02-04 15:59:58] VERSION_ID="7"
[2026-02-04 15:59:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 15:59:58] ANSI_COLOR="0;31"
[2026-02-04 15:59:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 15:59:58] HOME_URL="https://www.centos.org/"
[2026-02-04 15:59:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 15:59:58] 
[2026-02-04 15:59:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 15:59:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 15:59:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 15:59:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 15:59:58] 
[2026-02-04 15:59:58] 2026-02-04 14:59:03,274 | INFO     | **************************************
[2026-02-04 15:59:58] 2026-02-04 14:59:03,777 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-02-04 15:59:58] 2026-02-04 14:59:03,789 | INFO     | sufficient remaining disk space (493445185536 B)
[2026-02-04 15:59:58] 2026-02-04 14:59:03,789 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 15:59:58] 2026-02-04 14:59:03,789 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 15:59:58] 2026-02-04 14:59:03,789 | INFO     | update_server=False
[2026-02-04 15:59:58] 2026-02-04 14:59:03,789 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 15:59:58] 2026-02-04 14:59:03,789 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:59:58] 2026-02-04 14:59:03,863 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 15:59:58] 2026-02-04 14:59:04,206 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 15:59:58] 2026-02-04 14:59:04,207 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 15:59:58] 2026-02-04 14:59:04,207 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:59:58] 2026-02-04 14:59:04,207 | INFO     | will abort loop
[2026-02-04 15:59:58] 2026-02-04 14:59:04,341 | INFO     | all payload control threads have been joined
[2026-02-04 15:59:58] 2026-02-04 14:59:04,634 | INFO     | all data control threads have been joined
[2026-02-04 15:59:58] 2026-02-04 14:59:04,795 | INFO     | [job] queue monitor thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:04,795 | INFO     | [job] retrieve thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:04,803 | INFO     | [payload] validate_post thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:04,857 | INFO     | [job] validate thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:04,896 | INFO     | [data] copytool_in thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:04,942 | INFO     | all job control threads have been joined
[2026-02-04 15:59:58] 2026-02-04 14:59:05,212 | INFO     | [job] job monitor thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:05,347 | INFO     | [payload] control thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:05,446 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:05,640 | INFO     | [data] control thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:05,869 | INFO     | [data] copytool_out thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:05,883 | INFO     | [payload] failed_post thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:05,948 | INFO     | [job] control thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:06,030 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:06,264 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:06,340 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 15:59:58] 2026-02-04 14:59:10,347 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:14,564 | INFO     | job.realtimelogging is not enabled
[2026-02-04 15:59:58] 2026-02-04 14:59:15,570 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 15:59:58] 2026-02-04 14:59:34,066 | INFO     | PID=2752823 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 15:59:58] 2026-02-04 14:59:34,066 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 15:59:58] 2026-02-04 14:59:34,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 15:59:58] 2026-02-04 14:59:34,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 15:59:58] 2026-02-04 14:59:51,796 | INFO     | [monitor] cgroup control has ended
[2026-02-04 15:59:58] 2026-02-04 14:59:53,442 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139742411937600)>', '<ExcThread(monitor, started 139741752174336)>']
[2026-02-04 15:59:58] 2026-02-04 14:59:54,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 15:59:58] 2026-02-04 14:59:54,168 | INFO     | [monitor] control thread has ended
[2026-02-04 15:59:58] 2026-02-04 14:59:58,458 | INFO     | all workflow threads have been joined
[2026-02-04 15:59:58] 2026-02-04 14:59:58,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 15:59:58] 2026-02-04 14:59:58,459 | INFO     | traces error code: 0
[2026-02-04 15:59:58] 2026-02-04 14:59:58,460 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 15:59:58] 2026-02-04 14:59:58,501 [wrapper] ==== pilot stdout END ====
[2026-02-04 15:59:58] 2026-02-04 14:59:58,504 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 15:59:58] 2026-02-04 14:59:58,506 [wrapper] pilotpid: 2752823
[2026-02-04 15:59:58] 2026-02-04 14:59:58,508 [wrapper] Pilot exit status: 0
[2026-02-04 15:59:58] 2026-02-04 14:59:58,514 [wrapper] pandaids: 7000476487
[2026-02-04 15:59:58] 2026-02-04 14:59:58,528 [wrapper] cleanup supervisor_pilot 2762132 2752824
[2026-02-04 15:59:58] 2026-02-04 14:59:58,530 [wrapper] Test setup, not cleaning
[2026-02-04 15:59:58] 2026-02-04 14:59:58,532 [wrapper] apfmon messages muted
[2026-02-04 15:59:58] 2026-02-04 14:59:58,534 [wrapper] ==== wrapper stdout END ====
[2026-02-04 15:59:58] 2026-02-04 14:59:58,536 [wrapper] ==== wrapper stderr END ====
[2026-02-04 15:59:58]  *** Error codes and diagnostics ***
[2026-02-04 15:59:58]     "exeErrorCode": 0,
[2026-02-04 15:59:58]     "exeErrorDiag": "",
[2026-02-04 15:59:58]     "pilotErrorCode": 0,
[2026-02-04 15:59:58]     "pilotErrorDiag": "",
[2026-02-04 15:59:58]  *** Listing of results directory ***
[2026-02-04 15:59:58] total 680236
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc      5111 Feb  4 00:41 queuedata.json
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc    584422 Feb  4 00:41 pilot3.tar.gz
[2026-02-04 15:59:58] -rwx------ 1 boinc boinc     36322 Feb  4 00:41 runpilot2-wrapper.sh
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc       100 Feb  4 13:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 15:59:58] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 13:45 run_atlas
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc       105 Feb  4 13:45 job.xml
[2026-02-04 15:59:58] -rw-r--r-- 2 boinc boinc 503251836 Feb  4 13:45 EVNT.48317889._000273.pool.root.1
[2026-02-04 15:59:58] -rw-r--r-- 2 boinc boinc    597750 Feb  4 13:45 input.tar.gz
[2026-02-04 15:59:58] -rw-r--r-- 2 boinc boinc     15845 Feb  4 13:45 start_atlas.sh
[2026-02-04 15:59:58] drwxrwx--x 2 boinc boinc      4096 Feb  4 13:45 shared
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc         0 Feb  4 13:45 boinc_setup_complete
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc      6209 Feb  4 13:45 init_data.xml
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc         0 Feb  4 13:45 boinc_lockfile
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc      2522 Feb  4 13:45 pandaJob.out
[2026-02-04 15:59:58] -rw------- 1 boinc boinc   1009228 Feb  4 13:45 agis_schedconf.cvmfs.json
[2026-02-04 15:59:58] -rw------- 1 boinc boinc   1511668 Feb  4 13:45 agis_ddmendpoints.agis.ALL.json
[2026-02-04 15:59:58] -rw------- 1 boinc boinc       428 Feb  4 13:45 workernode_map.json
[2026-02-04 15:59:58] drwx------ 5 boinc boinc      4096 Feb  4 13:45 pilot3
[2026-02-04 15:59:58] -rw------- 1 boinc boinc 186526910 Feb  4 15:58 HITS.48317892._014243.pool.root.1
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc       530 Feb  4 15:58 boinc_task_state.xml
[2026-02-04 15:59:58] -rw------- 1 boinc boinc      1010 Feb  4 15:58 memory_monitor_summary.json
[2026-02-04 15:59:58] -rw------- 1 boinc boinc    276210 Feb  4 15:58 log.48317892._014243.job.log.tgz.1
[2026-02-04 15:59:58] -rw------- 1 boinc boinc      6304 Feb  4 15:59 heartbeat.json
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc      8192 Feb  4 15:59 boinc_mmap_file
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc        27 Feb  4 15:59 wrapper_checkpoint.txt
[2026-02-04 15:59:58] -rw------- 1 boinc boinc        95 Feb  4 15:59 pilot_heartbeat.json
[2026-02-04 15:59:58] -rw------- 1 boinc boinc      5006 Feb  4 15:59 pilotlog.txt
[2026-02-04 15:59:58] -rw------- 1 boinc boinc   1147683 Feb  4 15:59 log.48317892._014243.job.log.1
[2026-02-04 15:59:58] -rw------- 1 boinc boinc       357 Feb  4 15:59 output.list
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc       620 Feb  4 15:59 runtime_log
[2026-02-04 15:59:58] -rw------- 1 boinc boinc   1443840 Feb  4 15:59 result.tar.gz
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc      8911 Feb  4 15:59 runtime_log.err
[2026-02-04 15:59:58] -rw------- 1 boinc boinc       660 Feb  4 15:59 PW1NDmjCf78n9Rq4apOajLDm4fhM0noT9bVooX4SDmTfVKDmm1ngwn.diag
[2026-02-04 15:59:58] -rw-r--r-- 1 boinc boinc      9356 Feb  4 15:59 stderr.txt
[2026-02-04 15:59:58] HITS file was successfully produced:
[2026-02-04 15:59:58] -rw------- 1 boinc boinc 186526910 Feb  4 15:58 shared/HITS.pool.root.1
[2026-02-04 15:59:58]  *** Contents of shared directory: ***
[2026-02-04 15:59:58] total 675636
[2026-02-04 15:59:58] -rw-r--r-- 2 boinc boinc 503251836 Feb  4 13:45 ATLAS.root_0
[2026-02-04 15:59:58] -rw-r--r-- 2 boinc boinc    597750 Feb  4 13:45 input.tar.gz
[2026-02-04 15:59:58] -rw-r--r-- 2 boinc boinc     15845 Feb  4 13:45 start_atlas.sh
[2026-02-04 15:59:58] -rw------- 1 boinc boinc 186526910 Feb  4 15:58 HITS.pool.root.1
[2026-02-04 15:59:58] -rw------- 1 boinc boinc   1443840 Feb  4 15:59 result.tar.gz
15:59:59 (2748795): run_atlas exited; CPU time 15611.775781
15:59:59 (2748795): called boinc_finish(0)

</stderr_txt>
]]>

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