Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:57:00 (1567116): wrapper (7.7.26015): starting
11:57:00 (1567116): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 11:57:00] Arguments: --nthreads 4
[2026-02-04 11:57:00] Threads: 4
[2026-02-04 11:57:00] Checking for CVMFS
[2026-02-04 11:57:00] No cvmfs_config command found, will try listing directly
[2026-02-04 11:57:00] CVMFS is ok
[2026-02-04 11:57:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 11:57:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 11:57:00] Further information can be found at the LHC@home message board.
[2026-02-04 11:57:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 11:57:00] Checking for apptainer binary...
[2026-02-04 11:57:00] which: no apptainer in ((null))
[2026-02-04 11:57:00] apptainer is not installed, using version from CVMFS
[2026-02-04 11:57:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 11:57:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut23.grid.cesnet.cz
[2026-02-04 11:57:00] apptainer works
[2026-02-04 11:57:00] Set ATHENA_PROC_NUMBER=4
[2026-02-04 11:57:00] Set ATHENA_CORE_NUMBER=4
[2026-02-04 11:57:00] Starting ATLAS job with PandaID=6994524327
[2026-02-04 11:57:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 15:26:43]  *** The last 200 lines of the pilot log: ***
[2026-02-04 15:26:43] 2026-02-04 14:25:44,344 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 15:26:43] 2026-02-04 14:25:44,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 15:26:43] 2026-02-04 14:25:44,345 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 15:26:43] 2026-02-04 14:25:44,345 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 15:26:43] 2026-02-04 14:25:44,349 | INFO     | fitting pss+swap vs Time
[2026-02-04 15:26:43] 2026-02-04 14:25:44,350 | INFO     | sum of square deviations: 2671343110.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,351 | INFO     | sum of deviations: 539570497.9999981
[2026-02-04 15:26:43] 2026-02-04 14:25:44,351 | INFO     | mean x: 1770208882.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,352 | INFO     | mean y: 2324219.3170731706
[2026-02-04 15:26:43] 2026-02-04 14:25:44,352 | INFO     | intersect: -355230931.29207486
[2026-02-04 15:26:43] 2026-02-04 14:25:44,352 | INFO     | chi2: 2.146086779645116
[2026-02-04 15:26:43] 2026-02-04 14:25:44,353 | INFO     | sum of square deviations: 2480604650.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,354 | INFO     | sum of deviations: 13562478431.999996
[2026-02-04 15:26:43] 2026-02-04 14:25:44,354 | INFO     | mean x: 1770208729.5
[2026-02-04 15:26:43] 2026-02-04 14:25:44,354 | INFO     | mean y: 2334422.38
[2026-02-04 15:26:43] 2026-02-04 14:25:44,355 | INFO     | intersect: -9676119463.442503
[2026-02-04 15:26:43] 2026-02-04 14:25:44,355 | INFO     | chi2: 1.3056104696812094
[2026-02-04 15:26:43] 2026-02-04 14:25:44,355 | INFO     | current chi2=1.3056104696812094 (change=39.16320243596535 %)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,356 | INFO     | sum of square deviations: 2299168690.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,357 | INFO     | sum of deviations: 13131193670.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,357 | INFO     | mean x: 1770208577.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,357 | INFO     | mean y: 2334059.815384615
[2026-02-04 15:26:43] 2026-02-04 14:25:44,357 | INFO     | intersect: -10107820867.91291
[2026-02-04 15:26:43] 2026-02-04 14:25:44,358 | INFO     | chi2: 1.30632936932608
[2026-02-04 15:26:43] 2026-02-04 14:25:44,358 | INFO     | current chi2=1.30632936932608 (change=-0.05506233762403345 %)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,358 | INFO     | right removable region: 194
[2026-02-04 15:26:43] 2026-02-04 14:25:44,358 | INFO     | sum of square deviations: 2480604650.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,360 | INFO     | sum of deviations: -20488499409.499992
[2026-02-04 15:26:43] 2026-02-04 14:25:44,360 | INFO     | mean x: 1770209034.5
[2026-02-04 15:26:43] 2026-02-04 14:25:44,360 | INFO     | mean y: 2340746.155
[2026-02-04 15:26:43] 2026-02-04 14:25:44,360 | INFO     | intersect: 14623343233.610952
[2026-02-04 15:26:43] 2026-02-04 14:25:44,361 | INFO     | chi2: 0.946326185439871
[2026-02-04 15:26:43] 2026-02-04 14:25:44,361 | INFO     | current chi2=0.946326185439871 (change=55.90457038291999 %)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,361 | INFO     | sum of square deviations: 2299168690.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,362 | INFO     | sum of deviations: -10978817454.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,363 | INFO     | mean x: 1770209187.0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,363 | INFO     | mean y: 2332730.2974358974
[2026-02-04 15:26:43] 2026-02-04 14:25:44,363 | INFO     | intersect: 8455302538.035531
[2026-02-04 15:26:43] 2026-02-04 14:25:44,363 | INFO     | chi2: 0.8655037326819001
[2026-02-04 15:26:43] 2026-02-04 14:25:44,363 | INFO     | current chi2=0.8655037326819001 (change=8.540654797627004 %)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,364 | INFO     | left removable region: 20
[2026-02-04 15:26:43] 2026-02-04 14:25:44,365 | INFO     | sum of square deviations: 1633472487.5
[2026-02-04 15:26:43] 2026-02-04 14:25:44,366 | INFO     | sum of deviations: 96379451.00000006
[2026-02-04 15:26:43] 2026-02-04 14:25:44,366 | INFO     | mean x: 1770209156.5
[2026-02-04 15:26:43] 2026-02-04 14:25:44,366 | INFO     | mean y: 2344961.540229885
[2026-02-04 15:26:43] 2026-02-04 14:25:44,366 | INFO     | intersect: -102102335.8365147
[2026-02-04 15:26:43] 2026-02-04 14:25:44,367 | INFO     | chi2: 0.0010559203982852463
[2026-02-04 15:26:43] 2026-02-04 14:25:44,367 | INFO     | current memory leak: 0.06 B/s (using 174 data points, chi2=0.00)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,367 | INFO     | could have reported an average CPU frequency of 2421 MHz (10 samples)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,368 | INFO     | ..............................
[2026-02-04 15:26:43] 2026-02-04 14:25:44,368 | INFO     | . Timing measurements:
[2026-02-04 15:26:43] 2026-02-04 14:25:44,368 | INFO     | . get job = 0 s
[2026-02-04 15:26:43] 2026-02-04 14:25:44,368 | INFO     | . initial setup = 5 s
[2026-02-04 15:26:43] 2026-02-04 14:25:44,368 | INFO     | . payload setup = 6 s
[2026-02-04 15:26:43] 2026-02-04 14:25:44,368 | INFO     | . stage-in = 0 s
[2026-02-04 15:26:43] 2026-02-04 14:25:44,368 | INFO     | . payload execution = 12481 s
[2026-02-04 15:26:43] 2026-02-04 14:25:44,369 | INFO     | . stage-out = 1 s
[2026-02-04 15:26:43] 2026-02-04 14:25:44,369 | INFO     | . log creation = 0 s
[2026-02-04 15:26:43] 2026-02-04 14:25:44,369 | INFO     | ..............................
[2026-02-04 15:26:43] 2026-02-04 14:25:44,410 | INFO     | time since job start (12507s) is within the limit (349056.0s)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,476 | INFO     | 
[2026-02-04 15:26:43] 2026-02-04 14:25:44,477 | INFO     | job summary report
[2026-02-04 15:26:43] 2026-02-04 14:25:44,477 | INFO     | --------------------------------------------------
[2026-02-04 15:26:43] 2026-02-04 14:25:44,477 | INFO     | PanDA job id: 6994524327
[2026-02-04 15:26:43] 2026-02-04 14:25:44,477 | INFO     | task id: 48310749
[2026-02-04 15:26:43] 2026-02-04 14:25:44,477 | INFO     | errors: (none)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,477 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | pilot state: finished 
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | transexitcode: 0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | exeerrorcode: 0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | exeerrordiag: 
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | exitcode: 0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | exitmsg: OK
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | cpuconsumptiontime: 47303 s
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | nevents: 400
[2026-02-04 15:26:43] 2026-02-04 14:25:44,478 | INFO     | neventsw: 0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,479 | INFO     | pid: 1575745
[2026-02-04 15:26:43] 2026-02-04 14:25:44,479 | INFO     | pgrp: 1575745
[2026-02-04 15:26:43] 2026-02-04 14:25:44,479 | INFO     | corecount: 4
[2026-02-04 15:26:43] 2026-02-04 14:25:44,479 | INFO     | event service: False
[2026-02-04 15:26:43] 2026-02-04 14:25:44,479 | INFO     | sizes: {0: 2277799, 1: 2278260, 11: 2278260, 12491: 2308084, 12493: 2317160, 12495: 2317298}
[2026-02-04 15:26:43] 2026-02-04 14:25:44,479 | INFO     | --------------------------------------------------
[2026-02-04 15:26:43] 2026-02-04 14:25:44,479 | INFO     | 
[2026-02-04 15:26:43] 2026-02-04 14:25:44,480 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2026-02-04 15:26:43] 2026-02-04 14:25:44,497 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,497 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,497 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,498 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,498 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,498 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,498 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,498 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,498 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,498 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,500 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,500 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,501 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 15:26:43] 2026-02-04 14:25:44,501 | INFO     | job 6994524327 has completed (purged errors)
[2026-02-04 15:26:43] 2026-02-04 14:25:44,501 | INFO     | overall cleanup function is called
[2026-02-04 15:26:43] 2026-02-04 14:25:45,553 | INFO     | --- collectZombieJob: --- 10, [1575745]
[2026-02-04 15:26:43] 2026-02-04 14:25:45,553 | INFO     | zombie collector waiting for pid 1575745
[2026-02-04 15:26:43] 2026-02-04 14:25:45,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 15:26:43] 2026-02-04 14:25:45,554 | INFO     | collected zombie processes
[2026-02-04 15:26:43] 2026-02-04 14:25:45,554 | INFO     | will attempt to kill all subprocesses of pid=1575745
[2026-02-04 15:26:43] 2026-02-04 14:25:45,555 | WARNING  | process 1575745 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 15:26:43] 2026-02-04 14:25:46,312 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 15:26:43] 2026-02-04 14:25:46,342 | INFO     | process IDs to be killed: [1575745] (in reverse order)
[2026-02-04 15:26:43] 2026-02-04 14:25:46,432 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 15:26:43] 2026-02-04 14:25:46,433 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 15:26:43] 2026-02-04 14:25:46,458 | INFO     | did not find any defunct processes belonging to 1575745
[2026-02-04 15:26:43] 2026-02-04 14:25:46,475 | INFO     | did not find any defunct processes belonging to 1575745
[2026-02-04 15:26:43] 2026-02-04 14:25:46,476 | INFO     | ready for new job
[2026-02-04 15:26:43] 2026-02-04 14:25:46,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 15:26:43] 2026-02-04 14:25:46,478 | INFO     | **************************************
[2026-02-04 15:26:43] 2026-02-04 14:25:46,478 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 15:26:43] 2026-02-04 14:25:46,478 | INFO     | **************************************
[2026-02-04 15:26:43] 2026-02-04 14:25:46,479 | INFO     | 
[2026-02-04 15:26:43] 2026-02-04 14:25:46,482 | INFO     | architecture information:
[2026-02-04 15:26:43] 2026-02-04 14:25:46,482 | INFO     | executing command: cat /etc/os-release
[2026-02-04 15:26:43] 2026-02-04 14:25:46,499 | INFO     | cat /etc/os-release:
[2026-02-04 15:26:43] NAME="CentOS Linux"
[2026-02-04 15:26:43] VERSION="7 (Core)"
[2026-02-04 15:26:43] ID="centos"
[2026-02-04 15:26:43] ID_LIKE="rhel fedora"
[2026-02-04 15:26:43] VERSION_ID="7"
[2026-02-04 15:26:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 15:26:43] ANSI_COLOR="0;31"
[2026-02-04 15:26:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 15:26:43] HOME_URL="https://www.centos.org/"
[2026-02-04 15:26:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 15:26:43] 
[2026-02-04 15:26:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 15:26:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 15:26:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 15:26:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 15:26:43] 
[2026-02-04 15:26:43] 2026-02-04 14:25:46,500 | INFO     | **************************************
[2026-02-04 15:26:43] 2026-02-04 14:25:46,740 | INFO     | number of running child processes to parent process 1575745: 1
[2026-02-04 15:26:43] 2026-02-04 14:25:46,740 | INFO     | maximum number of monitored processes: 6
[2026-02-04 15:26:43] 2026-02-04 14:25:46,740 | INFO     | aborting job monitoring since job object (job id=6994524327) has expired
[2026-02-04 15:26:43] 2026-02-04 14:25:47,003 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2026-02-04 15:26:43] 2026-02-04 14:25:47,018 | INFO     | sufficient remaining disk space (1643821137920 B)
[2026-02-04 15:26:43] 2026-02-04 14:25:47,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 15:26:43] 2026-02-04 14:25:47,019 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 15:26:43] 2026-02-04 14:25:47,019 | INFO     | update_server=False
[2026-02-04 15:26:43] 2026-02-04 14:25:47,019 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 15:26:43] 2026-02-04 14:25:47,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:26:43] 2026-02-04 14:25:47,020 | INFO     | will abort loop
[2026-02-04 15:26:43] 2026-02-04 14:25:47,025 | INFO     | all data control threads have been joined
[2026-02-04 15:26:43] 2026-02-04 14:25:47,855 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 15:26:43] 2026-02-04 14:25:47,954 | INFO     | all job control threads have been joined
[2026-02-04 15:26:43] 2026-02-04 14:25:48,025 | INFO     | [job] retrieve thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,025 | INFO     | [job] job monitor thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,025 | INFO     | [payload] validate_post thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,030 | INFO     | [data] control thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,096 | INFO     | [data] copytool_in thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,138 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,147 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,246 | INFO     | all payload control threads have been joined
[2026-02-04 15:26:43] 2026-02-04 14:25:48,458 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 15:26:43] 2026-02-04 14:25:48,476 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,689 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:48,958 | INFO     | [job] control thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:49,251 | INFO     | [payload] control thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:49,419 | INFO     | [job] validate thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:49,487 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 15:26:43] 2026-02-04 14:25:49,593 | INFO     | [payload] failed_post thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:49,861 | INFO     | [data] copytool_out thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:50,492 | INFO     | [job] queue monitor thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:25:52,464 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 15:26:43] 2026-02-04 14:26:17,960 | INFO     | PID=1571144 has CPU usage=7.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 15:26:43] 2026-02-04 14:26:17,960 | INFO     | .. there are 3 such processes running
[2026-02-04 15:26:43] 2026-02-04 14:26:17,960 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 15:26:43] 2026-02-04 14:26:17,961 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 15:26:43] 2026-02-04 14:26:17,961 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 15:26:43] 2026-02-04 14:26:38,058 | INFO     | [monitor] cgroup control has ended
[2026-02-04 15:26:43] 2026-02-04 14:26:38,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22376564270912)>', '<ExcThread(monitor, started 22376321652480)>']
[2026-02-04 15:26:43] 2026-02-04 14:26:39,044 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 15:26:43] 2026-02-04 14:26:39,045 | INFO     | [monitor] control thread has ended
[2026-02-04 15:26:43] 2026-02-04 14:26:43,527 | INFO     | all workflow threads have been joined
[2026-02-04 15:26:43] 2026-02-04 14:26:43,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 15:26:43] 2026-02-04 14:26:43,527 | INFO     | traces error code: 0
[2026-02-04 15:26:43] 2026-02-04 14:26:43,527 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 15:26:43] 2026-02-04 14:26:43,649 [wrapper] ==== pilot stdout END ====
[2026-02-04 15:26:43] 2026-02-04 14:26:43,653 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 15:26:43] 2026-02-04 14:26:43,656 [wrapper] pilotpid: 1571144
[2026-02-04 15:26:43] 2026-02-04 14:26:43,659 [wrapper] Pilot exit status: 0
[2026-02-04 15:26:43] 2026-02-04 14:26:43,679 [wrapper] pandaids: 6994524327
[2026-02-04 15:26:43] 2026-02-04 14:26:43,735 [wrapper] cleanup supervisor_pilot 1669609 1571145
[2026-02-04 15:26:43] 2026-02-04 14:26:43,738 [wrapper] Test setup, not cleaning
[2026-02-04 15:26:43] 2026-02-04 14:26:43,741 [wrapper] apfmon messages muted
[2026-02-04 15:26:43] 2026-02-04 14:26:43,743 [wrapper] ==== wrapper stdout END ====
[2026-02-04 15:26:43] 2026-02-04 14:26:43,746 [wrapper] ==== wrapper stderr END ====
[2026-02-04 15:26:43]  *** Error codes and diagnostics ***
[2026-02-04 15:26:43]     "exeErrorCode": 0,
[2026-02-04 15:26:43]     "exeErrorDiag": "",
[2026-02-04 15:26:43]     "pilotErrorCode": 0,
[2026-02-04 15:26:43]     "pilotErrorDiag": "",
[2026-02-04 15:26:43]  *** Listing of results directory ***
[2026-02-04 15:26:43] total 675652
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc    584422 Feb  3 22:59 pilot3.tar.gz
[2026-02-04 15:26:43] -rwx------ 1 boinc boinc     36322 Feb  3 23:00 runpilot2-wrapper.sh
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc      5111 Feb  3 23:03 queuedata.json
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc       100 Feb  4 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 15:26:43] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 11:56 run_atlas
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc       105 Feb  4 11:56 job.xml
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc      6424 Feb  4 11:57 init_data.xml
[2026-02-04 15:26:43] -rw-r--r-- 2 boinc boinc 500191942 Feb  4 11:57 EVNT.48310747._000088.pool.root.1
[2026-02-04 15:26:43] -rw-r--r-- 2 boinc boinc     15845 Feb  4 11:57 start_atlas.sh
[2026-02-04 15:26:43] drwxrwx--x 2 boinc boinc      4096 Feb  4 11:57 shared
[2026-02-04 15:26:43] -rw-r--r-- 2 boinc boinc    597763 Feb  4 11:57 input.tar.gz
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc         0 Feb  4 11:57 boinc_lockfile
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc      2522 Feb  4 11:57 pandaJob.out
[2026-02-04 15:26:43] -rw------- 1 boinc boinc   1009236 Feb  4 11:57 agis_schedconf.cvmfs.json
[2026-02-04 15:26:43] -rw------- 1 boinc boinc       445 Feb  4 11:57 workernode_map.json
[2026-02-04 15:26:43] drwx------ 5 boinc boinc      4096 Feb  4 11:57 pilot3
[2026-02-04 15:26:43] -rw------- 1 boinc boinc 183423186 Feb  4 15:24 HITS.48310749._004374.pool.root.1
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc       530 Feb  4 15:25 boinc_task_state.xml
[2026-02-04 15:26:43] -rw------- 1 boinc boinc      1060 Feb  4 15:25 memory_monitor_summary.json
[2026-02-04 15:26:43] -rw------- 1 boinc boinc   1511668 Feb  4 15:25 agis_ddmendpoints.agis.ALL.json
[2026-02-04 15:26:43] -rw------- 1 boinc boinc    388414 Feb  4 15:25 log.48310749._004374.job.log.tgz.1
[2026-02-04 15:26:43] -rw------- 1 boinc boinc      6421 Feb  4 15:25 heartbeat.json
[2026-02-04 15:26:43] -rw------- 1 boinc boinc        95 Feb  4 15:25 pilot_heartbeat.json
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc      8192 Feb  4 15:26 boinc_mmap_file
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc        26 Feb  4 15:26 wrapper_checkpoint.txt
[2026-02-04 15:26:43] -rw------- 1 boinc boinc      5120 Feb  4 15:26 pilotlog.txt
[2026-02-04 15:26:43] -rw------- 1 boinc boinc   1768781 Feb  4 15:26 log.48310749._004374.job.log.1
[2026-02-04 15:26:43] -rw------- 1 boinc boinc       357 Feb  4 15:26 output.list
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc       620 Feb  4 15:26 runtime_log
[2026-02-04 15:26:43] -rw------- 1 boinc boinc   2170880 Feb  4 15:26 result.tar.gz
[2026-02-04 15:26:43] -rw------- 1 boinc boinc       670 Feb  4 15:26 spJMDmpcd78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmX3VKDmrIMAnm.diag
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc      9205 Feb  4 15:26 runtime_log.err
[2026-02-04 15:26:43] -rw-r--r-- 1 boinc boinc     20859 Feb  4 15:26 stderr.txt
[2026-02-04 15:26:43] HITS file was successfully produced:
[2026-02-04 15:26:43] -rw------- 1 boinc boinc 183423186 Feb  4 15:24 shared/HITS.pool.root.1
[2026-02-04 15:26:43]  *** Contents of shared directory: ***
[2026-02-04 15:26:43] total 670328
[2026-02-04 15:26:43] -rw-r--r-- 2 boinc boinc 500191942 Feb  4 11:57 ATLAS.root_0
[2026-02-04 15:26:43] -rw-r--r-- 2 boinc boinc     15845 Feb  4 11:57 start_atlas.sh
[2026-02-04 15:26:43] -rw-r--r-- 2 boinc boinc    597763 Feb  4 11:57 input.tar.gz
[2026-02-04 15:26:43] -rw------- 1 boinc boinc 183423186 Feb  4 15:24 HITS.pool.root.1
[2026-02-04 15:26:43] -rw------- 1 boinc boinc   2170880 Feb  4 15:26 result.tar.gz
15:26:45 (1567116): run_atlas exited; CPU time 47854.672321
15:26:45 (1567116): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN