Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
04:22:16 (4551): wrapper (7.7.26015): starting
04:22:16 (4551): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 04:22:16] Arguments: --nthreads 4
[2026-02-04 04:22:16] Threads: 4
[2026-02-04 04:22:16] Checking for CVMFS
[2026-02-04 04:22:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 04:22:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 04:22:22] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 04:22:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 04:22:22] 2.11.5.0 4786 0 25488 155855 3 1 3501537 4194304 0 130560 0 0 0.000 1336 2682 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2026-02-04 04:22:22] CVMFS is ok
[2026-02-04 04:22:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 04:22:22] Checking for apptainer binary...
[2026-02-04 04:22:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 04:22:22] Running /usr/bin/apptainer --version
[2026-02-04 04:22:23] apptainer version 1.0.3
[2026-02-04 04:22:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 04:22:24] TeeC21
[2026-02-04 04:22:24] apptainer works
[2026-02-04 04:22:24] Set ATHENA_PROC_NUMBER=4
[2026-02-04 04:22:24] Set ATHENA_CORE_NUMBER=4
[2026-02-04 04:22:24] Starting ATLAS job with PandaID=7000585615
[2026-02-04 04:22:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 09:03:00]  *** The last 200 lines of the pilot log: ***
[2026-02-04 09:03:00] 2026-02-04 09:02:07,828 | INFO     | PID=8872 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-04 09:03:00] 2026-02-04 09:02:08,224 | INFO     | job 7000585615 has state=finished
[2026-02-04 09:03:00] 2026-02-04 09:02:08,224 | INFO     | preparing for final server update for job 7000585615 in state='finished'
[2026-02-04 09:03:00] 2026-02-04 09:02:08,225 | INFO     | reading metadata from: /home/m/BOINC/slots/2/PanDA_Pilot-7000585615/jobReport.json
[2026-02-04 09:03:00] 2026-02-04 09:02:08,229 | INFO     | added worker_node to metadata from /home/m/BOINC/slots/2/workernode_map.json
[2026-02-04 09:03:00] 2026-02-04 09:02:08,230 | INFO     | this job has now completed (state=finished)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,230 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,230 | INFO     | log transfer has been attempted: DONE
[2026-02-04 09:03:00] 2026-02-04 09:02:08,231 | INFO     | job 7000585615 has finished - writing final server update
[2026-02-04 09:03:00] 2026-02-04 09:02:08,231 | INFO     | total number of processed events: 400 (read)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,249 | INFO     | using path: /home/m/BOINC/slots/2/PanDA_Pilot-7000585615/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,250 | INFO     | extracted standard info from prmon json
[2026-02-04 09:03:00] 2026-02-04 09:02:08,250 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 09:03:00] 2026-02-04 09:02:08,250 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 09:03:00] 2026-02-04 09:02:08,250 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 09:03:00] 2026-02-04 09:02:08,250 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 09:03:00] 2026-02-04 09:02:08,254 | INFO     | fitting pss+swap vs Time
[2026-02-04 09:03:00] 2026-02-04 09:02:08,255 | INFO     | sum of square deviations: 6378584712.5
[2026-02-04 09:03:00] 2026-02-04 09:02:08,257 | INFO     | sum of deviations: -71199117467.0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,257 | INFO     | mean x: 1770187352.5
[2026-02-04 09:03:00] 2026-02-04 09:02:08,257 | INFO     | mean y: 2440294.4598540147
[2026-02-04 09:03:00] 2026-02-04 09:02:08,257 | INFO     | intersect: 19761647537.134727
[2026-02-04 09:03:00] 2026-02-04 09:02:08,258 | INFO     | chi2: 1.8708115242991055
[2026-02-04 09:03:00] 2026-02-04 09:02:08,258 | INFO     | sum of square deviations: 6035722470.0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,260 | INFO     | sum of deviations: -69610112302.00003
[2026-02-04 09:03:00] 2026-02-04 09:02:08,260 | INFO     | mean x: 1770187200.0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,260 | INFO     | mean y: 2441001.31598513
[2026-02-04 09:03:00] 2026-02-04 09:02:08,260 | INFO     | intersect: 20418046655.822327
[2026-02-04 09:03:00] 2026-02-04 09:02:08,260 | INFO     | chi2: 1.865675179980323
[2026-02-04 09:03:00] 2026-02-04 09:02:08,261 | INFO     | current chi2=1.865675179980323 (change=0.27455167193855734 %)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,261 | INFO     | right removable region: 268
[2026-02-04 09:03:00] 2026-02-04 09:02:08,261 | INFO     | sum of square deviations: 6035722470.0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,262 | INFO     | sum of deviations: -100782044686.99998
[2026-02-04 09:03:00] 2026-02-04 09:02:08,262 | INFO     | mean x: 1770187505.0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,262 | INFO     | mean y: 2453275.82527881
[2026-02-04 09:03:00] 2026-02-04 09:02:08,262 | INFO     | intersect: 29560325944.75848
[2026-02-04 09:03:00] 2026-02-04 09:02:08,262 | INFO     | chi2: 0.5459096603252361
[2026-02-04 09:03:00] 2026-02-04 09:02:08,262 | INFO     | current chi2=0.5459096603252361 (change=70.8196334459849 %)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,262 | INFO     | sum of square deviations: 5705372090.0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,263 | INFO     | sum of deviations: -88682678033.99997
[2026-02-04 09:03:00] 2026-02-04 09:02:08,263 | INFO     | mean x: 1770187657.5
[2026-02-04 09:03:00] 2026-02-04 09:02:08,263 | INFO     | mean y: 2447687.659090909
[2026-02-04 09:03:00] 2026-02-04 09:02:08,263 | INFO     | intersect: 27517740224.84278
[2026-02-04 09:03:00] 2026-02-04 09:02:08,264 | INFO     | chi2: 0.526777926134313
[2026-02-04 09:03:00] 2026-02-04 09:02:08,264 | INFO     | current chi2=0.526777926134313 (change=3.504560476091425 %)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,264 | INFO     | left removable region: 20
[2026-02-04 09:03:00] 2026-02-04 09:02:08,264 | INFO     | sum of square deviations: 4729621702.0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | sum of deviations: -60024019001.499985
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | mean x: 1770187779.5
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | mean y: 2435175.431451613
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | intersect: 22468034246.07168
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | chi2: 0.4441815313003956
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | current memory leak: -12.69 B/s (using 248 data points, chi2=0.44)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | could have reported an average CPU frequency of 3360 MHz (13 samples)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | ..............................
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | . Timing measurements:
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | . get job = 0 s
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | . initial setup = 4 s
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | . payload setup = 5 s
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | . stage-in = 0 s
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | . payload execution = 16698 s
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | . stage-out = 1 s
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | . log creation = 0 s
[2026-02-04 09:03:00] 2026-02-04 09:02:08,265 | INFO     | ..............................
[2026-02-04 09:03:00] 2026-02-04 09:02:08,303 | INFO     | 
[2026-02-04 09:03:00] 2026-02-04 09:02:08,303 | INFO     | job summary report
[2026-02-04 09:03:00] 2026-02-04 09:02:08,303 | INFO     | --------------------------------------------------
[2026-02-04 09:03:00] 2026-02-04 09:02:08,303 | INFO     | PanDA job id: 7000585615
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | task id: 48431096
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | errors: (none)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | pilot state: finished 
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | transexitcode: 0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | exeerrorcode: 0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | exeerrordiag: 
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | exitcode: 0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | exitmsg: OK
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | cpuconsumptiontime: 65318 s
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | nevents: 400
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | neventsw: 0
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | pid: 13250
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | pgrp: 13250
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | corecount: 4
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | event service: False
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | sizes: {0: 2277776, 1: 2278293, 11: 2278293, 16707: 2310282, 16708: 2310281, 16709: 2319333, 16710: 2319711}
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | --------------------------------------------------
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | 
[2026-02-04 09:03:00] 2026-02-04 09:02:08,304 | INFO     | executing command: ls -lF /home/m/BOINC/slots/2
[2026-02-04 09:03:00] 2026-02-04 09:02:08,311 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,312 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,313 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 09:03:00] 2026-02-04 09:02:08,313 | INFO     | job 7000585615 has completed (purged errors)
[2026-02-04 09:03:00] 2026-02-04 09:02:08,313 | INFO     | overall cleanup function is called
[2026-02-04 09:03:00] 2026-02-04 09:02:09,319 | INFO     | --- collectZombieJob: --- 10, [13250]
[2026-02-04 09:03:00] 2026-02-04 09:02:09,319 | INFO     | zombie collector waiting for pid 13250
[2026-02-04 09:03:00] 2026-02-04 09:02:09,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 09:03:00] 2026-02-04 09:02:09,320 | INFO     | collected zombie processes
[2026-02-04 09:03:00] 2026-02-04 09:02:09,320 | INFO     | will attempt to kill all subprocesses of pid=13250
[2026-02-04 09:03:00] 2026-02-04 09:02:09,368 | INFO     | process IDs to be killed: [13250] (in reverse order)
[2026-02-04 09:03:00] 2026-02-04 09:02:09,387 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 09:03:00] 2026-02-04 09:02:09,387 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 09:03:00] 2026-02-04 09:02:09,389 | INFO     | did not find any defunct processes belonging to 13250
[2026-02-04 09:03:00] 2026-02-04 09:02:09,390 | INFO     | did not find any defunct processes belonging to 13250
[2026-02-04 09:03:00] 2026-02-04 09:02:09,390 | INFO     | ready for new job
[2026-02-04 09:03:00] 2026-02-04 09:02:09,390 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 09:03:00] 2026-02-04 09:02:09,391 | INFO     | **************************************
[2026-02-04 09:03:00] 2026-02-04 09:02:09,391 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 09:03:00] 2026-02-04 09:02:09,391 | INFO     | **************************************
[2026-02-04 09:03:00] 2026-02-04 09:02:09,391 | INFO     | 
[2026-02-04 09:03:00] 2026-02-04 09:02:09,412 | INFO     | architecture information:
[2026-02-04 09:03:00] 2026-02-04 09:02:09,413 | INFO     | executing command: cat /etc/os-release
[2026-02-04 09:03:00] 2026-02-04 09:02:09,422 | INFO     | cat /etc/os-release:
[2026-02-04 09:03:00] NAME="CentOS Linux"
[2026-02-04 09:03:00] VERSION="7 (Core)"
[2026-02-04 09:03:00] ID="centos"
[2026-02-04 09:03:00] ID_LIKE="rhel fedora"
[2026-02-04 09:03:00] VERSION_ID="7"
[2026-02-04 09:03:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 09:03:00] ANSI_COLOR="0;31"
[2026-02-04 09:03:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 09:03:00] HOME_URL="https://www.centos.org/"
[2026-02-04 09:03:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 09:03:00] 
[2026-02-04 09:03:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 09:03:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 09:03:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 09:03:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 09:03:00] 
[2026-02-04 09:03:00] 2026-02-04 09:02:09,422 | INFO     | **************************************
[2026-02-04 09:03:00] 2026-02-04 09:02:09,925 | INFO     | executing command: df -mP /home/m/BOINC/slots/2
[2026-02-04 09:03:00] 2026-02-04 09:02:09,938 | INFO     | sufficient remaining disk space (412289597440 B)
[2026-02-04 09:03:00] 2026-02-04 09:02:09,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 09:03:00] 2026-02-04 09:02:09,939 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 09:03:00] 2026-02-04 09:02:09,939 | INFO     | update_server=False
[2026-02-04 09:03:00] 2026-02-04 09:02:09,939 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 09:03:00] 2026-02-04 09:02:09,939 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 09:03:00] 2026-02-04 09:02:09,939 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 09:03:00] 2026-02-04 09:02:10,214 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 09:03:00] 2026-02-04 09:02:10,215 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 09:03:00] 2026-02-04 09:02:10,215 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 09:03:00] 2026-02-04 09:02:10,215 | INFO     | will abort loop
[2026-02-04 09:03:00] 2026-02-04 09:02:10,505 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 09:03:00] 2026-02-04 09:02:10,814 | INFO     | all data control threads have been joined
[2026-02-04 09:03:00] 2026-02-04 09:02:10,815 | INFO     | all job control threads have been joined
[2026-02-04 09:03:00] 2026-02-04 09:02:10,944 | INFO     | [job] retrieve thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:10,945 | INFO     | [job] queue monitor thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:10,993 | INFO     | all payload control threads have been joined
[2026-02-04 09:03:00] 2026-02-04 09:02:11,025 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:11,221 | INFO     | [job] job monitor thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:11,359 | INFO     | [payload] validate_post thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:11,522 | INFO     | [payload] failed_post thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:11,820 | INFO     | [data] control thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:11,821 | INFO     | [job] control thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:11,841 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:11,973 | INFO     | [job] validate thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:11,998 | INFO     | [payload] control thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:12,068 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:12,311 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:12,430 | INFO     | [data] copytool_in thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:12,510 | INFO     | [data] copytool_out thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:13,945 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 09:03:00] 2026-02-04 09:02:39,969 | INFO     | PID=8872 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-02-04 09:03:00] 2026-02-04 09:02:39,970 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 09:03:00] 2026-02-04 09:02:39,970 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 09:03:00] 2026-02-04 09:02:39,970 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 09:03:00] 2026-02-04 09:02:54,541 | INFO     | [monitor] cgroup control has ended
[2026-02-04 09:03:00] 2026-02-04 09:02:55,197 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888172062528)>', '<ExcThread(monitor, started 139887722346240)>']
[2026-02-04 09:03:00] 2026-02-04 09:02:56,052 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 09:03:00] 2026-02-04 09:02:56,052 | INFO     | [monitor] control thread has ended
[2026-02-04 09:03:00] 2026-02-04 09:03:00,203 | INFO     | all workflow threads have been joined
[2026-02-04 09:03:00] 2026-02-04 09:03:00,204 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 09:03:00] 2026-02-04 09:03:00,204 | INFO     | traces error code: 0
[2026-02-04 09:03:00] 2026-02-04 09:03:00,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 09:03:00] 2026-02-04 09:03:00,282 [wrapper] ==== pilot stdout END ====
[2026-02-04 09:03:00] 2026-02-04 09:03:00,283 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 09:03:00] 2026-02-04 09:03:00,284 [wrapper] pilotpid: 8872
[2026-02-04 09:03:00] 2026-02-04 09:03:00,285 [wrapper] Pilot exit status: 0
[2026-02-04 09:03:00] 2026-02-04 09:03:00,290 [wrapper] pandaids: 7000585615
[2026-02-04 09:03:00] 2026-02-04 09:03:00,301 [wrapper] cleanup supervisor_pilot 19815 8873
[2026-02-04 09:03:00] 2026-02-04 09:03:00,302 [wrapper] Test setup, not cleaning
[2026-02-04 09:03:00] 2026-02-04 09:03:00,303 [wrapper] apfmon messages muted
[2026-02-04 09:03:00] 2026-02-04 09:03:00,304 [wrapper] ==== wrapper stdout END ====
[2026-02-04 09:03:00] 2026-02-04 09:03:00,306 [wrapper] ==== wrapper stderr END ====
[2026-02-04 09:03:00]  *** Error codes and diagnostics ***
[2026-02-04 09:03:00]     "exeErrorCode": 0,
[2026-02-04 09:03:00]     "exeErrorDiag": "",
[2026-02-04 09:03:00]     "pilotErrorCode": 0,
[2026-02-04 09:03:00]     "pilotErrorDiag": "",
[2026-02-04 09:03:00]  *** Listing of results directory ***
[2026-02-04 09:03:00] total 943204
[2026-02-04 09:03:00] -rw-r--r-- 1 m m    584422 Feb  4 01:26 pilot3.tar.gz
[2026-02-04 09:03:00] -rwx------ 1 m m     36322 Feb  4 01:31 runpilot2-wrapper.sh
[2026-02-04 09:03:00] -rw-r--r-- 1 m m      5111 Feb  4 01:34 queuedata.json
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m       100 Feb  4 04:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 09:03:00] -rwxr-xr-x 1 m m      7986 Feb  4 04:22 run_atlas
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m       105 Feb  4 04:22 job.xml
[2026-02-04 09:03:00] -rw-r--r-- 2 m m     15845 Feb  4 04:22 start_atlas.sh
[2026-02-04 09:03:00] drwxrwx--x 2 m m      4096 Feb  4 04:22 shared
[2026-02-04 09:03:00] -rw-r--r-- 2 m m    597772 Feb  4 04:22 input.tar.gz
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m      5873 Feb  4 04:22 init_data.xml
[2026-02-04 09:03:00] -rw-r--r-- 2 m m 673699907 Feb  4 04:22 EVNT.48431094._000134.pool.root.1
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m         0 Feb  4 04:22 boinc_lockfile
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m      2554 Feb  4 04:22 pandaJob.out
[2026-02-04 09:03:00] -rw------- 1 m m   1009236 Feb  4 04:23 agis_schedconf.cvmfs.json
[2026-02-04 09:03:00] -rw------- 1 m m       416 Feb  4 04:23 workernode_map.json
[2026-02-04 09:03:00] drwx------ 5 m m      4096 Feb  4 04:23 pilot3
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m       531 Feb  4 09:01 boinc_task_state.xml
[2026-02-04 09:03:00] -rw------- 1 m m 282636352 Feb  4 09:01 HITS.48431096._005386.pool.root.1
[2026-02-04 09:03:00] -rw------- 1 m m      1026 Feb  4 09:02 memory_monitor_summary.json
[2026-02-04 09:03:00] -rw------- 1 m m   1511668 Feb  4 09:02 agis_ddmendpoints.agis.ALL.json
[2026-02-04 09:03:00] -rw------- 1 m m    449711 Feb  4 09:02 log.48431096._005386.job.log.tgz.1
[2026-02-04 09:03:00] -rw------- 1 m m      6327 Feb  4 09:02 heartbeat.json
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m      8192 Feb  4 09:02 boinc_mmap_file
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m        28 Feb  4 09:02 wrapper_checkpoint.txt
[2026-02-04 09:03:00] -rw------- 1 m m        95 Feb  4 09:02 pilot_heartbeat.json
[2026-02-04 09:03:00] -rw------- 1 m m      4927 Feb  4 09:03 pilotlog.txt
[2026-02-04 09:03:00] -rw------- 1 m m   2332678 Feb  4 09:03 log.48431096._005386.job.log.1
[2026-02-04 09:03:00] -rw------- 1 m m       357 Feb  4 09:03 output.list
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m       620 Feb  4 09:03 runtime_log
[2026-02-04 09:03:00] -rw------- 1 m m   2795520 Feb  4 09:03 result.tar.gz
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m      8729 Feb  4 09:03 runtime_log.err
[2026-02-04 09:03:00] -rw------- 1 m m       645 Feb  4 09:03 1QJODmcug78n9Rq4apOajLDm4fhM0noT9bVooX4SDmO5VKDmUOLbim.diag
[2026-02-04 09:03:00] -rw-rw-r-- 1 m m     20996 Feb  4 09:03 stderr.txt
[2026-02-04 09:03:00] HITS file was successfully produced:
[2026-02-04 09:03:00] -rw------- 1 m m 282636352 Feb  4 09:01 shared/HITS.pool.root.1
[2026-02-04 09:03:00]  *** Contents of shared directory: ***
[2026-02-04 09:03:00] total 937268
[2026-02-04 09:03:00] -rw-r--r-- 2 m m     15845 Feb  4 04:22 start_atlas.sh
[2026-02-04 09:03:00] -rw-r--r-- 2 m m    597772 Feb  4 04:22 input.tar.gz
[2026-02-04 09:03:00] -rw-r--r-- 2 m m 673699907 Feb  4 04:22 ATLAS.root_0
[2026-02-04 09:03:00] -rw------- 1 m m 282636352 Feb  4 09:01 HITS.pool.root.1
[2026-02-04 09:03:00] -rw------- 1 m m   2795520 Feb  4 09:03 result.tar.gz
09:03:01 (4551): run_atlas exited; CPU time 65510.201094
09:03:01 (4551): called boinc_finish(0)

</stderr_txt>
]]>

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