Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:26:03 (3192246): wrapper (7.7.26015): starting
11:26:03 (3192246): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 11:26:03] Arguments: --nthreads 4
[2026-02-04 11:26:03] Threads: 4
[2026-02-04 11:26:03] Checking for CVMFS
[2026-02-04 11:26:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 11:26:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 11:26:03] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 11:26:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 11:26:03] 2.13.1.0 3933141 9714 98080 155864 3 55 8478217 10240000 1822 130560 0 18612768 99.996 342563 297 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-04 11:26:03] CVMFS is ok
[2026-02-04 11:26:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 11:26:03] Checking for apptainer binary...
[2026-02-04 11:26:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 11:26:03] Running /usr/bin/apptainer --version
[2026-02-04 11:26:03] apptainer version 1.4.5
[2026-02-04 11:26:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 11:26:04] julianvlneu
[2026-02-04 11:26:04] apptainer works
[2026-02-04 11:26:04] Set ATHENA_PROC_NUMBER=4
[2026-02-04 11:26:04] Set ATHENA_CORE_NUMBER=4
[2026-02-04 11:26:04] Starting ATLAS job with PandaID=7000586112
[2026-02-04 11:26:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 12:23:35]  *** The last 200 lines of the pilot log: ***
[2026-02-04 12:23:35]  is_altstaged=None
[2026-02-04 12:23:35]  is_tar=False
[2026-02-04 12:23:35]  lfn=log.48317952._012264.job.log.tgz.1
[2026-02-04 12:23:35]  mtime=0
[2026-02-04 12:23:35]  protocol_id=None
[2026-02-04 12:23:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 12:23:35]  replicas=None
[2026-02-04 12:23:35]  scope=mc23_13p6TeV
[2026-02-04 12:23:35]  status=None
[2026-02-04 12:23:35]  status_code=0
[2026-02-04 12:23:35]  storage_token=
[2026-02-04 12:23:35]  surl=/var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586112/log.48317952._012264.job.log.tgz.1
[2026-02-04 12:23:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/5d/log.48317952._012264.job.log.tgz.1
[2026-02-04 12:23:35]  workdir=None
[2026-02-04 12:23:35] ]
[2026-02-04 12:23:35] 2026-02-04 11:22:47,782 | INFO     | transferring file log.48317952._012264.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586112/log.48317952._012264.job.log.tgz.1 to /var/li
[2026-02-04 12:23:35] 2026-02-04 11:22:47,782 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586112/log.48317952._012264.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-04 12:23:35] 2026-02-04 11:22:47,805 | INFO     | adding to output.list: log.48317952._012264.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/50/5d/log.48317952._012264.job.log.tg
[2026-02-04 12:23:35] 2026-02-04 11:22:47,806 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 12:23:35] 2026-02-04 11:22:47,807 | INFO     | summary of transferred files:
[2026-02-04 12:23:35] 2026-02-04 11:22:47,807 | INFO     |  -- lfn=log.48317952._012264.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 12:23:35] 2026-02-04 11:22:47,807 | INFO     | stage-out finished correctly
[2026-02-04 12:23:35] 2026-02-04 11:22:47,843 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 12:23:35] 2026-02-04 11:22:49,110 | INFO     | time since job start (3383s) is within the limit (349056.0s)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,178 | INFO     | job 7000586112 has state=finished
[2026-02-04 12:23:35] 2026-02-04 11:22:50,178 | INFO     | preparing for final server update for job 7000586112 in state='finished'
[2026-02-04 12:23:35] 2026-02-04 11:22:50,178 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586112/jobReport.json
[2026-02-04 12:23:35] 2026-02-04 11:22:50,180 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/2/workernode_map.json
[2026-02-04 12:23:35] 2026-02-04 11:22:50,180 | INFO     | this job has now completed (state=finished)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,180 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,180 | INFO     | log transfer has been attempted: DONE
[2026-02-04 12:23:35] 2026-02-04 11:22:50,180 | INFO     | job 7000586112 has finished - writing final server update
[2026-02-04 12:23:35] 2026-02-04 11:22:50,180 | INFO     | total number of processed events: 400 (read)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,182 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/PanDA_Pilot-7000586112/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,182 | INFO     | extracted standard info from prmon json
[2026-02-04 12:23:35] 2026-02-04 11:22:50,182 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 12:23:35] 2026-02-04 11:22:50,182 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 12:23:35] 2026-02-04 11:22:50,182 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 12:23:35] 2026-02-04 11:22:50,182 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | fitting pss+swap vs Time
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | sum of square deviations: 34277852.0
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | sum of deviations: -3207480497.5
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | mean x: 1770202551.5
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | mean y: 2483120.3958333335
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | intersect: 165645597530.27744
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | chi2: 0.0267986455446167
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | current memory leak: -93.57 B/s (using 48 data points, chi2=0.03)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | could have reported an average CPU frequency of 4399 MHz (5 samples)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | ..............................
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | . Timing measurements:
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | . get job = 0 s
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | . initial setup = 7 s
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | . payload setup = 10 s
[2026-02-04 12:23:35] 2026-02-04 11:22:50,183 | INFO     | . stage-in = 0 s
[2026-02-04 12:23:35] 2026-02-04 11:22:50,184 | INFO     | . payload execution = 3355 s
[2026-02-04 12:23:35] 2026-02-04 11:22:50,184 | INFO     | . stage-out = 0 s
[2026-02-04 12:23:35] 2026-02-04 11:22:50,184 | INFO     | . log creation = 0 s
[2026-02-04 12:23:35] 2026-02-04 11:22:50,184 | INFO     | ..............................
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | 
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | job summary report
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | --------------------------------------------------
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | PanDA job id: 7000586112
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | task id: 48317952
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | errors: (none)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | pilot state: finished 
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | transexitcode: 0
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | exeerrorcode: 0
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | exeerrordiag: 
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | exitcode: 0
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | exitmsg: OK
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | cpuconsumptiontime: 12427 s
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | nevents: 400
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | neventsw: 0
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | pid: 3200829
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | pgrp: 3200829
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | corecount: 4
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | event service: False
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | sizes: {0: 2278288, 10: 2278288, 3370: 2303840, 3371: 2312922, 3374: 2313092}
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | --------------------------------------------------
[2026-02-04 12:23:35] 2026-02-04 11:22:50,410 | INFO     | 
[2026-02-04 12:23:35] 2026-02-04 11:22:50,411 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/2
[2026-02-04 12:23:35] 2026-02-04 11:22:50,433 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,434 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,435 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 12:23:35] 2026-02-04 11:22:50,435 | INFO     | job 7000586112 has completed (purged errors)
[2026-02-04 12:23:35] 2026-02-04 11:22:50,435 | INFO     | overall cleanup function is called
[2026-02-04 12:23:35] 2026-02-04 11:22:51,388 | WARNING  | process 3200829 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 12:23:35] 2026-02-04 11:22:51,442 | INFO     | --- collectZombieJob: --- 10, [3200829]
[2026-02-04 12:23:35] 2026-02-04 11:22:51,442 | INFO     | zombie collector waiting for pid 3200829
[2026-02-04 12:23:35] 2026-02-04 11:22:51,442 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 12:23:35] 2026-02-04 11:22:51,442 | INFO     | collected zombie processes
[2026-02-04 12:23:35] 2026-02-04 11:22:51,442 | INFO     | will attempt to kill all subprocesses of pid=3200829
[2026-02-04 12:23:35] 2026-02-04 11:22:51,598 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 12:23:35] 2026-02-04 11:22:51,929 | INFO     | process IDs to be killed: [3200829] (in reverse order)
[2026-02-04 12:23:35] 2026-02-04 11:22:51,979 | INFO     | number of running child processes to parent process 3200829: 1
[2026-02-04 12:23:35] 2026-02-04 11:22:51,979 | INFO     | maximum number of monitored processes: 6
[2026-02-04 12:23:35] 2026-02-04 11:22:51,979 | INFO     | aborting job monitoring since job object (job id=7000586112) has expired
[2026-02-04 12:23:35] 2026-02-04 11:22:52,001 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 12:23:35] 2026-02-04 11:22:52,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 12:23:35] 2026-02-04 11:22:52,005 | INFO     | did not find any defunct processes belonging to 3200829
[2026-02-04 12:23:35] 2026-02-04 11:22:52,008 | INFO     | did not find any defunct processes belonging to 3200829
[2026-02-04 12:23:35] 2026-02-04 11:22:52,008 | INFO     | ready for new job
[2026-02-04 12:23:35] 2026-02-04 11:22:52,008 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 12:23:35] 2026-02-04 11:22:52,009 | INFO     | **************************************
[2026-02-04 12:23:35] 2026-02-04 11:22:52,009 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 12:23:35] 2026-02-04 11:22:52,009 | INFO     | **************************************
[2026-02-04 12:23:35] 2026-02-04 11:22:52,009 | INFO     | 
[2026-02-04 12:23:35] 2026-02-04 11:22:52,010 | INFO     | pilot is running in a VM
[2026-02-04 12:23:35] 2026-02-04 11:22:52,010 | INFO     | architecture information:
[2026-02-04 12:23:35] 2026-02-04 11:22:52,010 | INFO     | executing command: cat /etc/os-release
[2026-02-04 12:23:35] 2026-02-04 11:22:52,026 | INFO     | cat /etc/os-release:
[2026-02-04 12:23:35] NAME="CentOS Linux"
[2026-02-04 12:23:35] VERSION="7 (Core)"
[2026-02-04 12:23:35] ID="centos"
[2026-02-04 12:23:35] ID_LIKE="rhel fedora"
[2026-02-04 12:23:35] VERSION_ID="7"
[2026-02-04 12:23:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 12:23:35] ANSI_COLOR="0;31"
[2026-02-04 12:23:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 12:23:35] HOME_URL="https://www.centos.org/"
[2026-02-04 12:23:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 12:23:35] 
[2026-02-04 12:23:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 12:23:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 12:23:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 12:23:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 12:23:35] 
[2026-02-04 12:23:35] 2026-02-04 11:22:52,027 | INFO     | **************************************
[2026-02-04 12:23:35] 2026-02-04 11:22:52,530 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/2
[2026-02-04 12:23:35] 2026-02-04 11:22:52,548 | INFO     | sufficient remaining disk space (140560564224 B)
[2026-02-04 12:23:35] 2026-02-04 11:22:52,548 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 12:23:35] 2026-02-04 11:22:52,549 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 12:23:35] 2026-02-04 11:22:52,549 | INFO     | update_server=False
[2026-02-04 12:23:35] 2026-02-04 11:22:52,549 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 12:23:35] 2026-02-04 11:22:52,549 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 12:23:35] 2026-02-04 11:22:52,549 | INFO     | will abort loop
[2026-02-04 12:23:35] 2026-02-04 11:22:52,569 | INFO     | all data control threads have been joined
[2026-02-04 12:23:35] 2026-02-04 11:22:52,700 | INFO     | all payload control threads have been joined
[2026-02-04 12:23:35] 2026-02-04 11:22:53,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 12:23:35] 2026-02-04 11:22:53,554 | INFO     | [job] retrieve thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:53,555 | INFO     | [job] job monitor thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:53,574 | INFO     | [data] control thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:53,705 | INFO     | [payload] control thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:53,750 | INFO     | all job control threads have been joined
[2026-02-04 12:23:35] 2026-02-04 11:22:53,842 | INFO     | [payload] validate_post thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:53,877 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 12:23:35] 2026-02-04 11:22:54,444 | INFO     | [job] validate thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:54,498 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:54,630 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:54,718 | INFO     | [data] copytool_in thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:54,756 | INFO     | [job] control thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:54,888 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:54,994 | INFO     | [payload] failed_post thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:55,219 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 12:23:35] 2026-02-04 11:22:55,360 | INFO     | [data] copytool_out thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:56,225 | INFO     | [job] queue monitor thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:22:57,884 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:23:02,594 | INFO     | job.realtimelogging is not enabled
[2026-02-04 12:23:35] 2026-02-04 11:23:03,600 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 12:23:35] 2026-02-04 11:23:22,338 | INFO     | PID=3196275 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 12:23:35] 2026-02-04 11:23:22,339 | INFO     | .. there are 3 such processes running
[2026-02-04 12:23:35] 2026-02-04 11:23:22,339 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 12:23:35] 2026-02-04 11:23:22,340 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 12:23:35] 2026-02-04 11:23:22,340 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 12:23:35] 2026-02-04 11:23:30,063 | INFO     | [monitor] cgroup control has ended
[2026-02-04 12:23:35] 2026-02-04 11:23:30,135 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 133223620757312)>', '<ExcThread(monitor, started 133222218323712)>']
[2026-02-04 12:23:35] 2026-02-04 11:23:30,384 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 12:23:35] 2026-02-04 11:23:30,385 | INFO     | [monitor] control thread has ended
[2026-02-04 12:23:35] 2026-02-04 11:23:35,144 | INFO     | all workflow threads have been joined
[2026-02-04 12:23:35] 2026-02-04 11:23:35,144 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 12:23:35] 2026-02-04 11:23:35,144 | INFO     | traces error code: 0
[2026-02-04 12:23:35] 2026-02-04 11:23:35,144 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 12:23:35] 2026-02-04 11:23:35,217 [wrapper] ==== pilot stdout END ====
[2026-02-04 12:23:35] 2026-02-04 11:23:35,222 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 12:23:35] 2026-02-04 11:23:35,227 [wrapper] pilotpid: 3196275
[2026-02-04 12:23:35] 2026-02-04 11:23:35,232 [wrapper] Pilot exit status: 0
[2026-02-04 12:23:35] 2026-02-04 11:23:35,254 [wrapper] pandaids: 7000586112
[2026-02-04 12:23:35] 2026-02-04 11:23:35,301 [wrapper] cleanup supervisor_pilot 3235942 3196276
[2026-02-04 12:23:35] 2026-02-04 11:23:35,306 [wrapper] Test setup, not cleaning
[2026-02-04 12:23:35] 2026-02-04 11:23:35,310 [wrapper] apfmon messages muted
[2026-02-04 12:23:35] 2026-02-04 11:23:35,315 [wrapper] ==== wrapper stdout END ====
[2026-02-04 12:23:35] 2026-02-04 11:23:35,320 [wrapper] ==== wrapper stderr END ====
[2026-02-04 12:23:35]  *** Error codes and diagnostics ***
[2026-02-04 12:23:35]     "exeErrorCode": 0,
[2026-02-04 12:23:35]     "exeErrorDiag": "",
[2026-02-04 12:23:35]     "pilotErrorCode": 0,
[2026-02-04 12:23:35]     "pilotErrorDiag": "",
[2026-02-04 12:23:35]  *** Listing of results directory ***
[2026-02-04 12:23:35] insgesamt 662052
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc    584422 Feb  4 02:26 pilot3.tar.gz
[2026-02-04 12:23:35] -rwx------ 1 yeti boinc     36322 Feb  4 02:28 runpilot2-wrapper.sh
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc      5111 Feb  4 02:29 queuedata.json
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc       100 Feb  4 11:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 12:23:35] -rwxr-xr-x 1 yeti boinc      7986 Feb  4 11:26 run_atlas
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc       105 Feb  4 11:26 job.xml
[2026-02-04 12:23:35] -rw-r--r-- 2 yeti boinc 494617406 Feb  4 11:26 EVNT.48317949._000232.pool.root.1
[2026-02-04 12:23:35] -rw-r--r-- 2 yeti boinc     15845 Feb  4 11:26 start_atlas.sh
[2026-02-04 12:23:35] drwxrwx--x 2 yeti boinc      4096 Feb  4 11:26 shared
[2026-02-04 12:23:35] -rw-r--r-- 2 yeti boinc    597761 Feb  4 11:26 input.tar.gz
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc      6732 Feb  4 11:26 init_data.xml
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc         0 Feb  4 11:26 boinc_setup_complete
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc         0 Feb  4 11:26 boinc_lockfile
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc      2523 Feb  4 11:26 pandaJob.out
[2026-02-04 12:23:35] -rw------- 1 yeti boinc        52 Feb  4 11:26 setup.sh.local
[2026-02-04 12:23:35] -rw------- 1 yeti boinc   1009236 Feb  4 11:26 agis_schedconf.cvmfs.json
[2026-02-04 12:23:35] -rw------- 1 yeti boinc   1511668 Feb  4 11:26 agis_ddmendpoints.agis.ALL.json
[2026-02-04 12:23:35] -rw------- 1 yeti boinc       425 Feb  4 11:26 workernode_map.json
[2026-02-04 12:23:35] drwx------ 5 yeti boinc      4096 Feb  4 11:26 pilot3
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc       530 Feb  4 12:22 boinc_task_state.xml
[2026-02-04 12:23:35] -rw------- 1 yeti boinc 177853563 Feb  4 12:22 HITS.48317952._012264.pool.root.1
[2026-02-04 12:23:35] -rw------- 1 yeti boinc      1016 Feb  4 12:22 memory_monitor_summary.json
[2026-02-04 12:23:35] -rw------- 1 yeti boinc    235107 Feb  4 12:22 log.48317952._012264.job.log.tgz.1
[2026-02-04 12:23:35] -rw------- 1 yeti boinc      6300 Feb  4 12:22 heartbeat.json
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc      8192 Feb  4 12:23 boinc_mmap_file
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc        27 Feb  4 12:23 wrapper_checkpoint.txt
[2026-02-04 12:23:35] -rw------- 1 yeti boinc        95 Feb  4 12:23 pilot_heartbeat.json
[2026-02-04 12:23:35] -rw------- 1 yeti boinc      4970 Feb  4 12:23 pilotlog.txt
[2026-02-04 12:23:35] -rw------- 1 yeti boinc    524371 Feb  4 12:23 log.48317952._012264.job.log.1
[2026-02-04 12:23:35] -rw------- 1 yeti boinc       357 Feb  4 12:23 output.list
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc       620 Feb  4 12:23 runtime_log
[2026-02-04 12:23:35] -rw------- 1 yeti boinc    778240 Feb  4 12:23 result.tar.gz
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc      9556 Feb  4 12:23 runtime_log.err
[2026-02-04 12:23:35] -rw------- 1 yeti boinc       640 Feb  4 12:23 Ac0NDm6rg78n9Rq4apOajLDm4fhM0noT9bVooX4SDmiyVKDmZhk0rn.diag
[2026-02-04 12:23:35] -rw-r--r-- 1 yeti boinc     21203 Feb  4 12:23 stderr.txt
[2026-02-04 12:23:35] HITS file was successfully produced:
[2026-02-04 12:23:35] -rw------- 1 yeti boinc 177853563 Feb  4 12:22 shared/HITS.pool.root.1
[2026-02-04 12:23:35]  *** Contents of shared directory: ***
[2026-02-04 12:23:35] insgesamt 658084
[2026-02-04 12:23:35] -rw-r--r-- 2 yeti boinc 494617406 Feb  4 11:26 ATLAS.root_0
[2026-02-04 12:23:35] -rw-r--r-- 2 yeti boinc     15845 Feb  4 11:26 start_atlas.sh
[2026-02-04 12:23:35] -rw-r--r-- 2 yeti boinc    597761 Feb  4 11:26 input.tar.gz
[2026-02-04 12:23:35] -rw------- 1 yeti boinc 177853563 Feb  4 12:22 HITS.pool.root.1
[2026-02-04 12:23:35] -rw------- 1 yeti boinc    778240 Feb  4 12:23 result.tar.gz
12:23:36 (3192246): run_atlas exited; CPU time 12513.946803
12:23:36 (3192246): called boinc_finish(0)

</stderr_txt>
]]>

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