Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:35:23 (3206837): wrapper (7.7.26015): starting
11:35:23 (3206837): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 11:35:23] Arguments: --nthreads 4
[2026-02-04 11:35:23] Threads: 4
[2026-02-04 11:35:23] Checking for CVMFS
[2026-02-04 11:35:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 11:35:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 11:35:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 11:35:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 11:35:23] 2.13.1.0 3933141 9724 97372 155864 2 188 8481738 10240001 1822 130560 0 18651818 99.996 342927 297 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.101.101:3128 1
[2026-02-04 11:35:23] CVMFS is ok
[2026-02-04 11:35:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 11:35:23] Checking for apptainer binary...
[2026-02-04 11:35:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 11:35:23] Running /usr/bin/apptainer --version
[2026-02-04 11:35:23] apptainer version 1.4.5
[2026-02-04 11:35:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 11:35:23] julianvlneu
[2026-02-04 11:35:23] apptainer works
[2026-02-04 11:35:23] Set ATHENA_PROC_NUMBER=4
[2026-02-04 11:35:23] Set ATHENA_CORE_NUMBER=4
[2026-02-04 11:35:23] Starting ATLAS job with PandaID=7000586058
[2026-02-04 11:35:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc_data/boinc-01/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 12:32:53]  *** The last 200 lines of the pilot log: ***
[2026-02-04 12:32:53]  guid=a85cc256-76b8-47e0-a385-394242a51c10
[2026-02-04 12:32:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-02-04 12:32:53]  is_altstaged=None
[2026-02-04 12:32:53]  is_tar=False
[2026-02-04 12:32:53]  lfn=log.48317952._012210.job.log.tgz.1
[2026-02-04 12:32:53]  mtime=0
[2026-02-04 12:32:53]  protocol_id=None
[2026-02-04 12:32:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-02-04 12:32:53]  replicas=None
[2026-02-04 12:32:53]  scope=mc23_13p6TeV
[2026-02-04 12:32:53]  status=None
[2026-02-04 12:32:53]  status_code=0
[2026-02-04 12:32:53]  storage_token=
[2026-02-04 12:32:53]  surl=/var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000586058/log.48317952._012210.job.log.tgz.1
[2026-02-04 12:32:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/5a/log.48317952._012210.job.log.tgz.1
[2026-02-04 12:32:53]  workdir=None
[2026-02-04 12:32:53] ]
[2026-02-04 12:32:53] 2026-02-04 11:32:12,749 | INFO     | transferring file log.48317952._012210.job.log.tgz.1 from /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000586058/log.48317952._012210.job.log.tgz.1 to /var/li
[2026-02-04 12:32:53] 2026-02-04 11:32:12,749 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000586058/log.48317952._012210.job.log.tgz.1 /var/lib/boinc_data/boinc-01/slot
[2026-02-04 12:32:53] 2026-02-04 11:32:12,773 | INFO     | adding to output.list: log.48317952._012210.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4d/5a/log.48317952._012210.job.log.tg
[2026-02-04 12:32:53] 2026-02-04 11:32:12,774 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-02-04 12:32:53] 2026-02-04 11:32:12,774 | INFO     | summary of transferred files:
[2026-02-04 12:32:53] 2026-02-04 11:32:12,774 | INFO     |  -- lfn=log.48317952._012210.job.log.tgz.1, status_code=0, status=transferred
[2026-02-04 12:32:53] 2026-02-04 11:32:12,775 | INFO     | stage-out finished correctly
[2026-02-04 12:32:53] 2026-02-04 11:32:13,208 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-02-04 12:32:53] 2026-02-04 11:32:14,019 | INFO     | time since job start (3391s) is within the limit (349056.0s)
[2026-02-04 12:32:53] 2026-02-04 11:32:14,081 | INFO     | monitor loop #262: job 0:7000586058 is in state 'finished'
[2026-02-04 12:32:53] 2026-02-04 11:32:14,081 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,599 | INFO     | job 7000586058 has state=finished
[2026-02-04 12:32:53] 2026-02-04 11:32:15,600 | INFO     | preparing for final server update for job 7000586058 in state='finished'
[2026-02-04 12:32:53] 2026-02-04 11:32:15,600 | INFO     | reading metadata from: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000586058/jobReport.json
[2026-02-04 12:32:53] 2026-02-04 11:32:15,601 | INFO     | added worker_node to metadata from /var/lib/boinc_data/boinc-01/slots/0/workernode_map.json
[2026-02-04 12:32:53] 2026-02-04 11:32:15,601 | INFO     | this job has now completed (state=finished)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,602 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,602 | INFO     | log transfer has been attempted: DONE
[2026-02-04 12:32:53] 2026-02-04 11:32:15,602 | INFO     | job 7000586058 has finished - writing final server update
[2026-02-04 12:32:53] 2026-02-04 11:32:15,602 | INFO     | total number of processed events: 400 (read)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,603 | INFO     | using path: /var/lib/boinc_data/boinc-01/slots/0/PanDA_Pilot-7000586058/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,603 | INFO     | extracted standard info from prmon json
[2026-02-04 12:32:53] 2026-02-04 11:32:15,603 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 12:32:53] 2026-02-04 11:32:15,603 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 12:32:53] 2026-02-04 11:32:15,603 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | INFO     | fitting pss+swap vs Time
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | INFO     | sum of square deviations: 36465800.0
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | INFO     | sum of deviations: -3121417031.0
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | INFO     | mean x: 1770203137.0
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | INFO     | mean y: 2432341.8571428573
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | INFO     | intersect: 151529129141.6374
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | INFO     | chi2: 0.026642343073735666
[2026-02-04 12:32:53] 2026-02-04 11:32:15,604 | INFO     | current memory leak: -85.60 B/s (using 49 data points, chi2=0.03)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | could have reported an average CPU frequency of 4399 MHz (5 samples)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | ..............................
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | . Timing measurements:
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | . get job = 0 s
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | . initial setup = 7 s
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | . payload setup = 8 s
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | . stage-in = 0 s
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | . payload execution = 3366 s
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | . stage-out = 0 s
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | . log creation = 0 s
[2026-02-04 12:32:53] 2026-02-04 11:32:15,605 | INFO     | ..............................
[2026-02-04 12:32:53] 2026-02-04 11:32:15,631 | INFO     | 
[2026-02-04 12:32:53] 2026-02-04 11:32:15,631 | INFO     | job summary report
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | --------------------------------------------------
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | PanDA job id: 7000586058
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | task id: 48317952
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | errors: (none)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | pilot state: finished 
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | transexitcode: 0
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | exeerrorcode: 0
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | exeerrordiag: 
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | exitcode: 0
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | exitmsg: OK
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | cpuconsumptiontime: 12576 s
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | nevents: 400
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | neventsw: 0
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | pid: 3215314
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | pgrp: 3215314
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | corecount: 4
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | event service: False
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | sizes: {0: 2278282, 11: 2278282, 3378: 2312857, 3379: 2312857, 3381: 2313083}
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | --------------------------------------------------
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | 
[2026-02-04 12:32:53] 2026-02-04 11:32:15,632 | INFO     | executing command: ls -lF /var/lib/boinc_data/boinc-01/slots/0
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | job 7000586058 has completed (purged errors)
[2026-02-04 12:32:53] 2026-02-04 11:32:15,656 | INFO     | overall cleanup function is called
[2026-02-04 12:32:53] 2026-02-04 11:32:16,663 | INFO     | --- collectZombieJob: --- 10, [3215314]
[2026-02-04 12:32:53] 2026-02-04 11:32:16,663 | INFO     | zombie collector waiting for pid 3215314
[2026-02-04 12:32:53] 2026-02-04 11:32:16,663 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 12:32:53] 2026-02-04 11:32:16,663 | INFO     | collected zombie processes
[2026-02-04 12:32:53] 2026-02-04 11:32:16,663 | INFO     | will attempt to kill all subprocesses of pid=3215314
[2026-02-04 12:32:53] 2026-02-04 11:32:16,779 | INFO     | process IDs to be killed: [3215314] (in reverse order)
[2026-02-04 12:32:53] 2026-02-04 11:32:16,847 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 12:32:53] 2026-02-04 11:32:16,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 12:32:53] 2026-02-04 11:32:16,852 | INFO     | did not find any defunct processes belonging to 3215314
[2026-02-04 12:32:53] 2026-02-04 11:32:16,855 | INFO     | did not find any defunct processes belonging to 3215314
[2026-02-04 12:32:53] 2026-02-04 11:32:16,856 | INFO     | ready for new job
[2026-02-04 12:32:53] 2026-02-04 11:32:16,856 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 12:32:53] 2026-02-04 11:32:16,857 | INFO     | **************************************
[2026-02-04 12:32:53] 2026-02-04 11:32:16,858 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 12:32:53] 2026-02-04 11:32:16,858 | INFO     | **************************************
[2026-02-04 12:32:53] 2026-02-04 11:32:16,858 | INFO     | 
[2026-02-04 12:32:53] 2026-02-04 11:32:16,858 | INFO     | pilot is running in a VM
[2026-02-04 12:32:53] 2026-02-04 11:32:16,858 | INFO     | architecture information:
[2026-02-04 12:32:53] 2026-02-04 11:32:16,858 | INFO     | executing command: cat /etc/os-release
[2026-02-04 12:32:53] 2026-02-04 11:32:16,873 | INFO     | cat /etc/os-release:
[2026-02-04 12:32:53] NAME="CentOS Linux"
[2026-02-04 12:32:53] VERSION="7 (Core)"
[2026-02-04 12:32:53] ID="centos"
[2026-02-04 12:32:53] ID_LIKE="rhel fedora"
[2026-02-04 12:32:53] VERSION_ID="7"
[2026-02-04 12:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 12:32:53] ANSI_COLOR="0;31"
[2026-02-04 12:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 12:32:53] HOME_URL="https://www.centos.org/"
[2026-02-04 12:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 12:32:53] 
[2026-02-04 12:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 12:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 12:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 12:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 12:32:53] 
[2026-02-04 12:32:53] 2026-02-04 11:32:16,873 | INFO     | **************************************
[2026-02-04 12:32:53] 2026-02-04 11:32:17,377 | INFO     | executing command: df -mP /var/lib/boinc_data/boinc-01/slots/0
[2026-02-04 12:32:53] 2026-02-04 11:32:17,392 | INFO     | sufficient remaining disk space (142646181888 B)
[2026-02-04 12:32:53] 2026-02-04 11:32:17,393 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 12:32:53] 2026-02-04 11:32:17,393 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 12:32:53] 2026-02-04 11:32:17,393 | INFO     | update_server=False
[2026-02-04 12:32:53] 2026-02-04 11:32:17,393 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 12:32:53] 2026-02-04 11:32:17,394 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 12:32:53] 2026-02-04 11:32:17,541 | INFO     | all data control threads have been joined
[2026-02-04 12:32:53] 2026-02-04 11:32:17,574 | INFO     | all payload control threads have been joined
[2026-02-04 12:32:53] 2026-02-04 11:32:17,588 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 12:32:53] 2026-02-04 11:32:17,588 | INFO     | aborting loop
[2026-02-04 12:32:53] 2026-02-04 11:32:17,828 | INFO     | all job control threads have been joined
[2026-02-04 12:32:53] 2026-02-04 11:32:18,317 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 12:32:53] 2026-02-04 11:32:18,399 | INFO     | [job] retrieve thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:18,399 | INFO     | [job] queue monitor thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:18,547 | INFO     | [data] control thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:18,580 | INFO     | [payload] control thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:18,593 | INFO     | [job] job monitor thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:18,636 | INFO     | [payload] failed_post thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:18,834 | INFO     | [job] control thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:19,214 | INFO     | [job] validate thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:19,239 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 12:32:53] 2026-02-04 11:32:19,378 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:19,391 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:19,433 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:19,526 | INFO     | [data] copytool_in thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:19,858 | INFO     | [payload] validate_post thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:20,323 | INFO     | [data] copytool_out thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:23,246 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:28,359 | INFO     | job.realtimelogging is not enabled
[2026-02-04 12:32:53] 2026-02-04 11:32:29,365 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 12:32:53] 2026-02-04 11:32:46,112 | INFO     | 3399s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-02-04 12:32:53] 2026-02-04 11:32:47,243 | INFO     | PID=3210757 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 12:32:53] 2026-02-04 11:32:47,243 | INFO     | .. there are 3 such processes running
[2026-02-04 12:32:53] 2026-02-04 11:32:47,243 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 12:32:53] 2026-02-04 11:32:47,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 12:32:53] 2026-02-04 11:32:47,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 12:32:53] 2026-02-04 11:32:47,281 | INFO     | [monitor] cgroup control has ended
[2026-02-04 12:32:53] 2026-02-04 11:32:48,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129374840170304)>', '<ExcThread(monitor, started 129373466257152)>']
[2026-02-04 12:32:53] 2026-02-04 11:32:48,249 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 12:32:53] 2026-02-04 11:32:48,249 | INFO     | [monitor] control thread has ended
[2026-02-04 12:32:53] 2026-02-04 11:32:53,210 | INFO     | all workflow threads have been joined
[2026-02-04 12:32:53] 2026-02-04 11:32:53,211 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 12:32:53] 2026-02-04 11:32:53,211 | INFO     | traces error code: 0
[2026-02-04 12:32:53] 2026-02-04 11:32:53,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 12:32:53] 2026-02-04 11:32:53,283 [wrapper] ==== pilot stdout END ====
[2026-02-04 12:32:53] 2026-02-04 11:32:53,289 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 12:32:53] 2026-02-04 11:32:53,294 [wrapper] pilotpid: 3210757
[2026-02-04 12:32:53] 2026-02-04 11:32:53,298 [wrapper] Pilot exit status: 0
[2026-02-04 12:32:53] 2026-02-04 11:32:53,321 [wrapper] pandaids: 7000586058
[2026-02-04 12:32:53] 2026-02-04 11:32:53,367 [wrapper] cleanup supervisor_pilot 3237287 3210758
[2026-02-04 12:32:53] 2026-02-04 11:32:53,372 [wrapper] Test setup, not cleaning
[2026-02-04 12:32:53] 2026-02-04 11:32:53,377 [wrapper] apfmon messages muted
[2026-02-04 12:32:53] 2026-02-04 11:32:53,382 [wrapper] ==== wrapper stdout END ====
[2026-02-04 12:32:53] 2026-02-04 11:32:53,387 [wrapper] ==== wrapper stderr END ====
[2026-02-04 12:32:53]  *** Error codes and diagnostics ***
[2026-02-04 12:32:53]     "exeErrorCode": 0,
[2026-02-04 12:32:53]     "exeErrorDiag": "",
[2026-02-04 12:32:53]     "pilotErrorCode": 0,
[2026-02-04 12:32:53]     "pilotErrorDiag": "",
[2026-02-04 12:32:53]  *** Listing of results directory ***
[2026-02-04 12:32:53] insgesamt 673872
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc    584422 Feb  4 02:26 pilot3.tar.gz
[2026-02-04 12:32:53] -rwx------ 1 yeti boinc     36322 Feb  4 02:28 runpilot2-wrapper.sh
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc      5111 Feb  4 02:29 queuedata.json
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc       100 Feb  4 11:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 12:32:53] -rwxr-xr-x 1 yeti boinc      7986 Feb  4 11:35 run_atlas
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc       105 Feb  4 11:35 job.xml
[2026-02-04 12:32:53] -rw-r--r-- 2 yeti boinc     15845 Feb  4 11:35 start_atlas.sh
[2026-02-04 12:32:53] drwxrwx--x 2 yeti boinc      4096 Feb  4 11:35 shared
[2026-02-04 12:32:53] -rw-r--r-- 2 yeti boinc    597758 Feb  4 11:35 input.tar.gz
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc      6732 Feb  4 11:35 init_data.xml
[2026-02-04 12:32:53] -rw-r--r-- 2 yeti boinc 502971636 Feb  4 11:35 EVNT.48317949._000231.pool.root.1
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc         0 Feb  4 11:35 boinc_setup_complete
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc         0 Feb  4 11:35 boinc_lockfile
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc      2520 Feb  4 11:35 pandaJob.out
[2026-02-04 12:32:53] -rw------- 1 yeti boinc        52 Feb  4 11:35 setup.sh.local
[2026-02-04 12:32:53] -rw------- 1 yeti boinc   1009236 Feb  4 11:35 agis_schedconf.cvmfs.json
[2026-02-04 12:32:53] -rw------- 1 yeti boinc   1511668 Feb  4 11:35 agis_ddmendpoints.agis.ALL.json
[2026-02-04 12:32:53] -rw------- 1 yeti boinc       425 Feb  4 11:35 workernode_map.json
[2026-02-04 12:32:53] drwx------ 5 yeti boinc      4096 Feb  4 11:35 pilot3
[2026-02-04 12:32:53] -rw------- 1 yeti boinc 181611693 Feb  4 12:31 HITS.48317952._012210.pool.root.1
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc       530 Feb  4 12:32 boinc_task_state.xml
[2026-02-04 12:32:53] -rw------- 1 yeti boinc        95 Feb  4 12:32 pilot_heartbeat.json
[2026-02-04 12:32:53] -rw------- 1 yeti boinc      1015 Feb  4 12:32 memory_monitor_summary.json
[2026-02-04 12:32:53] -rw------- 1 yeti boinc    231065 Feb  4 12:32 log.48317952._012210.job.log.tgz.1
[2026-02-04 12:32:53] -rw------- 1 yeti boinc      6292 Feb  4 12:32 heartbeat.json
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc        27 Feb  4 12:32 wrapper_checkpoint.txt
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc      8192 Feb  4 12:32 boinc_mmap_file
[2026-02-04 12:32:53] -rw------- 1 yeti boinc      5083 Feb  4 12:32 pilotlog.txt
[2026-02-04 12:32:53] -rw------- 1 yeti boinc    525184 Feb  4 12:32 log.48317952._012210.job.log.1
[2026-02-04 12:32:53] -rw------- 1 yeti boinc       357 Feb  4 12:32 output.list
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc       620 Feb  4 12:32 runtime_log
[2026-02-04 12:32:53] -rw------- 1 yeti boinc    778240 Feb  4 12:32 result.tar.gz
[2026-02-04 12:32:53] -rw------- 1 yeti boinc       639 Feb  4 12:32 wE8MDm6rg78n9Rq4apOajLDm4fhM0noT9bVooX4SDm2xVKDmGqN9Sm.diag
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc      9556 Feb  4 12:32 runtime_log.err
[2026-02-04 12:32:53] -rw-r--r-- 1 yeti boinc     21094 Feb  4 12:32 stderr.txt
[2026-02-04 12:32:53] HITS file was successfully produced:
[2026-02-04 12:32:53] -rw------- 1 yeti boinc 181611693 Feb  4 12:31 shared/HITS.pool.root.1
[2026-02-04 12:32:53]  *** Contents of shared directory: ***
[2026-02-04 12:32:53] insgesamt 669908
[2026-02-04 12:32:53] -rw-r--r-- 2 yeti boinc     15845 Feb  4 11:35 start_atlas.sh
[2026-02-04 12:32:53] -rw-r--r-- 2 yeti boinc    597758 Feb  4 11:35 input.tar.gz
[2026-02-04 12:32:53] -rw-r--r-- 2 yeti boinc 502971636 Feb  4 11:35 ATLAS.root_0
[2026-02-04 12:32:53] -rw------- 1 yeti boinc 181611693 Feb  4 12:31 HITS.pool.root.1
[2026-02-04 12:32:53] -rw------- 1 yeti boinc    778240 Feb  4 12:32 result.tar.gz
12:32:54 (3206837): run_atlas exited; CPU time 12663.159951
12:32:54 (3206837): called boinc_finish(0)

</stderr_txt>
]]>

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