Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:21:08 (3246523): wrapper (7.7.26015): starting
20:21:08 (3246523): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 20:21:09] Arguments: --nthreads 12
[2026-02-03 20:21:09] Threads: 12
[2026-02-03 20:21:09] Checking for CVMFS
[2026-02-03 20:21:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 20:21:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 20:21:10] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 20:21:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 20:21:12] 2.11.5.0 3857663 93519 225464 155855 2 75 26109619 45568001 15943 130560 0 479912180 99.789 308939741 17195 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-02-03 20:21:12] CVMFS is ok
[2026-02-03 20:21:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 20:21:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 20:21:12] Further information can be found at the LHC@home message board.
[2026-02-03 20:21:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 20:21:12] Checking for apptainer binary...
[2026-02-03 20:21:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 20:21:12] Running /usr/bin/apptainer --version
[2026-02-03 20:21:12] apptainer version 1.4.1-1.el9
[2026-02-03 20:21:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 20:21:13] wns0075.triumf.lcg
[2026-02-03 20:21:13] apptainer works
[2026-02-03 20:21:13] Set ATHENA_PROC_NUMBER=12
[2026-02-03 20:21:13] Set ATHENA_CORE_NUMBER=12
[2026-02-03 20:21:13] Starting ATLAS job with PandaID=7000585476
[2026-02-03 20:21:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 20:27:37]  *** The last 200 lines of the pilot log: ***
[2026-02-03 20:27:37] 2026-02-04 04:26:59,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 20:27:37] 2026-02-04 04:26:59,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | WARNING  | wrong length of table data, x=[1770179027.0, 1770179088.0], y=[1447.0, 466314.0] (must be same and length>=4)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | could have reported an average CPU frequency of 1439 MHz (4 samples)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | ..............................
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . Timing measurements:
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . get job = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . initial setup = 32 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . payload setup = 37 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . stage-in = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . payload execution = 101 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . stage-out = 1 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | . log creation = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | ..............................
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 20:27:37] 2026-02-04 04:26:59,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000585476/pilotlog.txt
[2026-02-03 20:27:37] 2026-02-04 04:26:59,908 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-03 20:27:37] - Log from pilotlog.txt -
[2026-02-03 20:27:37] 2026-02-04 04:26:59,708 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000585476/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,718 | INFO     | extracted standard info from prmon json
[2026-02-03 20:27:37] 2026-02-04 04:26:59,718 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 20:27:37] 2026-02-04 04:26:59,718 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 20:27:37] 2026-02-04 04:26:59,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 20:27:37] 2026-02-04 04:26:59,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | WARNING  | wrong length of table data, x=[1770179027.0, 1770179088.0], y=[1447.0, 466314.0] (must be same and length>=4)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | could have reported an average CPU frequency of 1439 MHz (4 samples)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | ..............................
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . Timing measurements:
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . get job = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . initial setup = 32 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . payload setup = 37 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . stage-in = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . payload execution = 101 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . stage-out = 1 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | . log creation = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | ..............................
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 20:27:37] 2026-02-04 04:26:59,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000585476/pilotlog.txt
[2026-02-03 20:27:37] 2026-02-04 04:26:59,908 | WARNING  | 
[2026-02-03 20:27:37] [begin log extracts]
[2026-02-03 20:27:37] - Log from pilotlog.txt -
[2026-02-03 20:27:37] 2026-02-04 04:26:59,708 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-7000585476/memory_monitor_summary.json (trf name=prmon)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,718 | INFO     | extracted standard info from prmon json
[2026-02-03 20:27:37] 2026-02-04 04:26:59,718 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 20:27:37] 2026-02-04 04:26:59,718 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 20:27:37] 2026-02-04 04:26:59,719 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 20:27:37] 2026-02-04 04:26:59,719 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | WARNING  | wrong length of table data, x=[1770179027.0, 1770179088.0], y=[1447.0, 466314.0] (must be same and length>=4)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | could have reported an average CPU frequency of 1439 MHz (4 samples)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | ..............................
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . Timing measurements:
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . get job = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,720 | INFO     | . initial setup = 32 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . payload setup = 37 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . stage-in = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . payload execution = 101 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,721 | INFO     | . stage-out = 1 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | . log creation = 0 s
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | ..............................
[2026-02-03 20:27:37] 2026-02-04 04:26:59,729 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 20:27:37] 2026-02-04 04:26:59,730 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-7000585476/pilotlog.txt
[2026-02-03 20:27:37] [end log extracts]
[2026-02-03 20:27:37] 2026-02-04 04:26:59,909 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-03 20:27:37] 2026-02-04 04:26:59,910 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-03 20:27:37] 2026-02-04 04:27:00,197 | INFO     | time since job start (270s) is within the limit (349056.0s)
[2026-02-03 20:27:37] 2026-02-04 04:27:00,287 | INFO     | 
[2026-02-03 20:27:37] 2026-02-04 04:27:00,287 | INFO     | job summary report
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | --------------------------------------------------
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | PanDA job id: 7000585476
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | task id: 48317952
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-03 20:24:45,704 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | pilot state: failed 
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | transexitcode: 65
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | exeerrorcode: 65
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | exitcode: 65
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 20:27:37] 2026-02-04 04:27:00,288 | INFO     | cpuconsumptiontime: 24 s
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | nevents: 0
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | neventsw: 0
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | pid: 3272194
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | pgrp: 3272194
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | corecount: 12
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | event service: False
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | sizes: {0: 2277840, 1: 2278301, 2: 2278301, 143: 2301526, 144: 2301502, 147: 2305822, 150: 2305978, 267: 2306144}
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | --------------------------------------------------
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | 
[2026-02-03 20:27:37] 2026-02-04 04:27:00,289 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-03 20:27:37] 2026-02-04 04:27:00,354 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,354 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,354 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,356 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,356 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 20:27:37] 2026-02-04 04:27:00,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,356 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 20:27:37] 2026-02-04 04:27:00,356 | INFO     | job 7000585476 has completed (purged errors)
[2026-02-03 20:27:37] 2026-02-04 04:27:00,356 | INFO     | overall cleanup function is called
[2026-02-03 20:27:37] 2026-02-04 04:27:01,369 | INFO     | --- collectZombieJob: --- 10, [3272194]
[2026-02-03 20:27:37] 2026-02-04 04:27:01,369 | INFO     | zombie collector waiting for pid 3272194
[2026-02-03 20:27:37] 2026-02-04 04:27:01,370 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 20:27:37] 2026-02-04 04:27:01,370 | INFO     | collected zombie processes
[2026-02-03 20:27:37] 2026-02-04 04:27:01,370 | INFO     | will attempt to kill all subprocesses of pid=3272194
[2026-02-03 20:27:37] 2026-02-04 04:27:01,754 | INFO     | process IDs to be killed: [3272194] (in reverse order)
[2026-02-03 20:27:37] 2026-02-04 04:27:01,865 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 20:27:37] 2026-02-04 04:27:01,865 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 20:27:37] 2026-02-04 04:27:01,915 | INFO     | did not find any defunct processes belonging to 3272194
[2026-02-03 20:27:37] 2026-02-04 04:27:01,946 | INFO     | did not find any defunct processes belonging to 3272194
[2026-02-03 20:27:37] 2026-02-04 04:27:01,947 | INFO     | ready for new job
[2026-02-03 20:27:37] 2026-02-04 04:27:01,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 20:27:37] 2026-02-04 04:27:01,949 | INFO     | **************************************
[2026-02-03 20:27:37] 2026-02-04 04:27:01,949 | INFO     | ***  PanDA Pilot version 3.11.4.1  ***
[2026-02-03 20:27:37] 2026-02-04 04:27:01,949 | INFO     | **************************************
[2026-02-03 20:27:37] 2026-02-04 04:27:01,949 | INFO     | 
[2026-02-03 20:27:37] 2026-02-04 04:27:01,961 | INFO     | architecture information:
[2026-02-03 20:27:37] 2026-02-04 04:27:01,967 | INFO     | executing command: cat /etc/os-release
[2026-02-03 20:27:37] 2026-02-04 04:27:02,023 | INFO     | cat /etc/os-release:
[2026-02-03 20:27:37] NAME="CentOS Linux"
[2026-02-03 20:27:37] VERSION="7 (Core)"
[2026-02-03 20:27:37] ID="centos"
[2026-02-03 20:27:37] ID_LIKE="rhel fedora"
[2026-02-03 20:27:37] VERSION_ID="7"
[2026-02-03 20:27:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 20:27:37] ANSI_COLOR="0;31"
[2026-02-03 20:27:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 20:27:37] HOME_URL="https://www.centos.org/"
[2026-02-03 20:27:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 20:27:37] 
[2026-02-03 20:27:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 20:27:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 20:27:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 20:27:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 20:27:37] 
[2026-02-03 20:27:37] 2026-02-04 04:27:02,024 | INFO     | **************************************
[2026-02-03 20:27:37] 2026-02-04 04:27:02,527 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-03 20:27:37] 2026-02-04 04:27:02,588 | INFO     | sufficient remaining disk space (1999003189248 B)
[2026-02-03 20:27:37] 2026-02-04 04:27:02,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 20:27:37] 2026-02-04 04:27:02,588 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 20:27:37] 2026-02-04 04:27:02,589 | INFO     | update_server=False
[2026-02-03 20:27:37] 2026-02-04 04:27:02,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 20:27:37] 2026-02-04 04:27:02,589 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 20:27:37] 2026-02-04 04:27:02,589 | INFO     | aborting loop
[2026-02-03 20:27:37] 2026-02-04 04:27:02,603 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 20:27:37] 2026-02-04 04:27:02,797 | INFO     | all data control threads have been joined
[2026-02-03 20:27:37] 2026-02-04 04:27:02,958 | INFO     | all payload control threads have been joined
[2026-02-03 20:27:37] 2026-02-04 04:27:03,379 | INFO     | all job control threads have been joined
[2026-02-03 20:27:37] 2026-02-04 04:27:03,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 20:27:37] 2026-02-04 04:27:03,594 | INFO     | [job] retrieve thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:03,595 | INFO     | [job] job monitor thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:03,803 | INFO     | [data] control thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:03,886 | INFO     | [data] copytool_in thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:03,926 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:03,964 | INFO     | [payload] control thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:04,095 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:04,252 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:04,386 | INFO     | [job] control thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:04,398 | INFO     | [payload] validate_post thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:04,835 | INFO     | [job] validate thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:04,870 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:05,103 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 20:27:37] 2026-02-04 04:27:05,199 | INFO     | [payload] failed_post thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:05,520 | INFO     | [data] copytool_out thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:06,109 | INFO     | [job] queue monitor thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:06,627 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 20:27:37] 2026-02-04 04:27:30,687 | INFO     | [monitor] cgroup control has ended
[2026-02-03 20:27:37] 2026-02-04 04:27:31,992 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139858820040512)>', '<ExcThread(monitor, started 139858127337216)>']
[2026-02-03 20:27:37] 2026-02-04 04:27:33,855 | INFO     | PID=3258675 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-03 20:27:37] 2026-02-04 04:27:33,855 | INFO     | .. there are 28 such processes running
[2026-02-03 20:27:37] 2026-02-04 04:27:33,855 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 20:27:37] 2026-02-04 04:27:33,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 20:27:37] 2026-02-04 04:27:33,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 20:27:37] 2026-02-04 04:27:33,856 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 20:27:37] 2026-02-04 04:27:33,856 | INFO     | [monitor] control thread has ended
[2026-02-03 20:27:37] 2026-02-04 04:27:37,018 | INFO     | all workflow threads have been joined
[2026-02-03 20:27:37] 2026-02-04 04:27:37,018 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 20:27:37] 2026-02-04 04:27:37,019 | INFO     | traces error code: 0
[2026-02-03 20:27:37] 2026-02-04 04:27:37,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 20:27:37] 2026-02-04 04:27:37,329 [wrapper] ==== pilot stdout END ====
[2026-02-03 20:27:37] 2026-02-04 04:27:37,332 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 20:27:37] 2026-02-04 04:27:37,335 [wrapper] pilotpid: 3258675
[2026-02-03 20:27:37] 2026-02-04 04:27:37,337 [wrapper] Pilot exit status: 0
[2026-02-03 20:27:37] 2026-02-04 04:27:37,352 [wrapper] pandaids: 7000585476
[2026-02-03 20:27:37] 2026-02-04 04:27:37,420 [wrapper] cleanup supervisor_pilot 3258681 3258676
[2026-02-03 20:27:37] 2026-02-04 04:27:37,423 [wrapper] Test setup, not cleaning
[2026-02-03 20:27:37] 2026-02-04 04:27:37,426 [wrapper] apfmon messages muted
[2026-02-03 20:27:37] 2026-02-04 04:27:37,435 [wrapper] ==== wrapper stdout END ====
[2026-02-03 20:27:37] 2026-02-04 04:27:37,443 [wrapper] ==== wrapper stderr END ====
[2026-02-03 20:27:37]  *** Error codes and diagnostics ***
[2026-02-03 20:27:37]     "exeErrorCode": 65,
[2026-02-03 20:27:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 20:27:37]     "pilotErrorCode": 1305,
[2026-02-03 20:27:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 20:27:37]  *** Listing of results directory ***
[2026-02-03 20:27:37] total 484784
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc    602657 Feb  3 03:11 pilot3.tar.gz
[2026-02-03 20:27:37] -rwx------. 1 boinc boinc     36322 Feb  3 17:28 runpilot2-wrapper.sh
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc      5111 Feb  3 17:29 queuedata.json
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc       100 Feb  3 20:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 20:27:37] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 20:21 run_atlas
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc       105 Feb  3 20:21 job.xml
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc      6593 Feb  3 20:21 init_data.xml
[2026-02-03 20:27:37] -rw-r--r--. 2 boinc boinc 492205403 Feb  3 20:21 EVNT.48317949._000228.pool.root.1
[2026-02-03 20:27:37] -rw-r--r--. 2 boinc boinc     15845 Feb  3 20:21 start_atlas.sh
[2026-02-03 20:27:37] drwxrwx--x. 2 boinc boinc      4096 Feb  3 20:21 shared
[2026-02-03 20:27:37] -rw-r--r--. 2 boinc boinc    616303 Feb  3 20:21 input.tar.gz
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc         0 Feb  3 20:21 boinc_lockfile
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc      2524 Feb  3 20:21 pandaJob.out
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc   1009236 Feb  3 20:21 agis_schedconf.cvmfs.json
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc   1511668 Feb  3 20:22 agis_ddmendpoints.agis.ALL.json
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc       445 Feb  3 20:22 workernode_map.json
[2026-02-03 20:27:37] drwx------. 7 boinc boinc      4096 Feb  3 20:22 pilot3
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc       525 Feb  3 20:24 boinc_task_state.xml
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc       990 Feb  3 20:24 memory_monitor_summary.json
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc     22431 Feb  3 20:24 log.48317952._012088.job.log.tgz.1
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc      7032 Feb  3 20:26 heartbeat.json
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc        95 Feb  3 20:27 pilot_heartbeat.json
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc      4819 Feb  3 20:27 pilotlog.txt
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc      8192 Feb  3 20:27 boinc_mmap_file
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc        23 Feb  3 20:27 wrapper_checkpoint.txt
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc     95054 Feb  3 20:27 log.48317952._012088.job.log.1
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc       188 Feb  3 20:27 output.list
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc       620 Feb  3 20:27 runtime_log
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc    133120 Feb  3 20:27 result.tar.gz
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc      8635 Feb  3 20:27 runtime_log.err
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc       646 Feb  3 20:27 PmIKDm5rg78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm0LWKDmMSqF7m.diag
[2026-02-03 20:27:37] -rw-r--r--. 1 boinc boinc     21889 Feb  3 20:27 stderr.txt
[2026-02-03 20:27:37] No HITS result produced
[2026-02-03 20:27:37]  *** Contents of shared directory: ***
[2026-02-03 20:27:37] total 481428
[2026-02-03 20:27:37] -rw-r--r--. 2 boinc boinc 492205403 Feb  3 20:21 ATLAS.root_0
[2026-02-03 20:27:37] -rw-r--r--. 2 boinc boinc     15845 Feb  3 20:21 start_atlas.sh
[2026-02-03 20:27:37] -rw-r--r--. 2 boinc boinc    616303 Feb  3 20:21 input.tar.gz
[2026-02-03 20:27:37] -rw-------. 1 boinc boinc    133120 Feb  3 20:27 result.tar.gz
20:27:39 (3246523): run_atlas exited; CPU time 35.917667
20:27:39 (3246523): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN