Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:43:26 (3807376): wrapper (7.7.26015): starting
04:43:26 (3807376): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 04:43:26] Arguments: --nthreads 4
[2026-02-04 04:43:26] Threads: 4
[2026-02-04 04:43:26] Checking for CVMFS
[2026-02-04 04:43:26] No cvmfs_config command found, will try listing directly
[2026-02-04 04:43:26] CVMFS is ok
[2026-02-04 04:43:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 04:43:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 04:43:26] Further information can be found at the LHC@home message board.
[2026-02-04 04:43:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 04:43:26] Checking for apptainer binary...
[2026-02-04 04:43:26] which: no apptainer in ((null))
[2026-02-04 04:43:26] apptainer is not installed, using version from CVMFS
[2026-02-04 04:43:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 04:43:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot24/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut05.grid.cesnet.cz
[2026-02-04 04:43:26] apptainer works
[2026-02-04 04:43:26] Set ATHENA_PROC_NUMBER=4
[2026-02-04 04:43:26] Set ATHENA_CORE_NUMBER=4
[2026-02-04 04:43:26] Starting ATLAS job with PandaID=7000585355
[2026-02-04 04:43:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot24/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 07:28:58]  *** The last 200 lines of the pilot log: ***
[2026-02-04 07:28:58] 2026-02-04 06:28:10,738 | INFO     | using path: /scratch/boinc/var/slot24/slots/0/PanDA_Pilot-7000585355/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 07:28:58] 2026-02-04 06:28:10,739 | INFO     | extracted standard info from prmon json
[2026-02-04 07:28:58] 2026-02-04 06:28:10,739 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 07:28:58] 2026-02-04 06:28:10,739 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 07:28:58] 2026-02-04 06:28:10,740 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 07:28:58] 2026-02-04 06:28:10,740 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 07:28:58] 2026-02-04 06:28:10,743 | INFO     | fitting pss+swap vs Time
[2026-02-04 07:28:58] 2026-02-04 06:28:10,743 | INFO     | sum of square deviations: 1318277740.5
[2026-02-04 07:28:58] 2026-02-04 06:28:10,744 | INFO     | sum of deviations: -1262060567.4999924
[2026-02-04 07:28:58] 2026-02-04 06:28:10,744 | INFO     | mean x: 1770181550.5
[2026-02-04 07:28:58] 2026-02-04 06:28:10,744 | INFO     | mean y: 2317076.537037037
[2026-02-04 07:28:58] 2026-02-04 06:28:10,744 | INFO     | intersect: 1697010283.8688245
[2026-02-04 07:28:58] 2026-02-04 06:28:10,745 | INFO     | chi2: 2.0031696765541063
[2026-02-04 07:28:58] 2026-02-04 06:28:10,745 | INFO     | sum of square deviations: 1199940638.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,746 | INFO     | sum of deviations: 8602260138.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,746 | INFO     | mean x: 1770181398.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,746 | INFO     | mean y: 2329465.4968152866
[2026-02-04 07:28:58] 2026-02-04 06:28:10,746 | INFO     | intersect: -12687932364.809256
[2026-02-04 07:28:58] 2026-02-04 06:28:10,746 | INFO     | chi2: 1.2266697623061347
[2026-02-04 07:28:58] 2026-02-04 06:28:10,746 | INFO     | current chi2=1.2266697623061347 (change=38.76356173600445 %)
[2026-02-04 07:28:58] 2026-02-04 06:28:10,747 | INFO     | sum of square deviations: 1088905998.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,747 | INFO     | sum of deviations: 8329334273.499997
[2026-02-04 07:28:58] 2026-02-04 06:28:10,748 | INFO     | mean x: 1770181245.5
[2026-02-04 07:28:58] 2026-02-04 06:28:10,748 | INFO     | mean y: 2329090.572368421
[2026-02-04 07:28:58] 2026-02-04 06:28:10,748 | INFO     | intersect: -13538262425.620256
[2026-02-04 07:28:58] 2026-02-04 06:28:10,748 | INFO     | chi2: 1.2276932217655683
[2026-02-04 07:28:58] 2026-02-04 06:28:10,748 | INFO     | current chi2=1.2276932217655683 (change=-0.08343398450692276 %)
[2026-02-04 07:28:58] 2026-02-04 06:28:10,748 | INFO     | right removable region: 151
[2026-02-04 07:28:58] 2026-02-04 06:28:10,748 | INFO     | sum of square deviations: 1199940638.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,749 | INFO     | sum of deviations: -18817117374.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,749 | INFO     | mean x: 1770181703.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,749 | INFO     | mean y: 2339283.146496815
[2026-02-04 07:28:58] 2026-02-04 06:28:10,749 | INFO     | intersect: 27761809896.773808
[2026-02-04 07:28:58] 2026-02-04 06:28:10,750 | INFO     | chi2: 0.8306558539855419
[2026-02-04 07:28:58] 2026-02-04 06:28:10,750 | INFO     | current chi2=0.8306558539855419 (change=58.53292590698291 %)
[2026-02-04 07:28:58] 2026-02-04 06:28:10,750 | INFO     | sum of square deviations: 1088905998.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,751 | INFO     | sum of deviations: -16390362304.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,751 | INFO     | mean x: 1770181855.5
[2026-02-04 07:28:58] 2026-02-04 06:28:10,751 | INFO     | mean y: 2335921.0789473685
[2026-02-04 07:28:58] 2026-02-04 06:28:10,751 | INFO     | intersect: 26647355793.227707
[2026-02-04 07:28:58] 2026-02-04 06:28:10,751 | INFO     | chi2: 0.8255030362387379
[2026-02-04 07:28:58] 2026-02-04 06:28:10,751 | INFO     | current chi2=0.8255030362387379 (change=0.6203312385123662 %)
[2026-02-04 07:28:58] 2026-02-04 06:28:10,751 | INFO     | left removable region: 20
[2026-02-04 07:28:58] 2026-02-04 06:28:10,752 | INFO     | sum of square deviations: 697054930.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,752 | INFO     | sum of deviations: -2484194622.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,752 | INFO     | mean x: 1770181825.0
[2026-02-04 07:28:58] 2026-02-04 06:28:10,753 | INFO     | mean y: 2343126.9694656488
[2026-02-04 07:28:58] 2026-02-04 06:28:10,753 | INFO     | intersect: 6310993966.907065
[2026-02-04 07:28:58] 2026-02-04 06:28:10,753 | INFO     | chi2: 0.014954981147377337
[2026-02-04 07:28:58] 2026-02-04 06:28:10,753 | INFO     | current memory leak: -3.56 B/s (using 131 data points, chi2=0.01)
[2026-02-04 07:28:58] 2026-02-04 06:28:10,753 | INFO     | could have reported an average CPU frequency of 2622 MHz (9 samples)
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | ..............................
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | . Timing measurements:
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | . get job = 0 s
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | . initial setup = 5 s
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | . payload setup = 5 s
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | . stage-in = 0 s
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | . payload execution = 9843 s
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | . stage-out = 0 s
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | . log creation = 0 s
[2026-02-04 07:28:58] 2026-02-04 06:28:10,754 | INFO     | ..............................
[2026-02-04 07:28:58] 2026-02-04 06:28:11,227 | INFO     | 
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | job summary report
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | --------------------------------------------------
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | PanDA job id: 7000585355
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | task id: 48317952
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | errors: (none)
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | pilot state: finished 
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | transexitcode: 0
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | exeerrorcode: 0
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | exeerrordiag: 
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | exitcode: 0
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | exitmsg: OK
[2026-02-04 07:28:58] 2026-02-04 06:28:11,228 | INFO     | cpuconsumptiontime: 37946 s
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | nevents: 400
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | neventsw: 0
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | pid: 3815878
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | pgrp: 3815878
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | corecount: 4
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | event service: False
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | sizes: {0: 2278023, 1: 2278313, 11: 2278313, 9853: 2306917, 9855: 2315937, 9858: 2315993, 9861: 2316407}
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | --------------------------------------------------
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | 
[2026-02-04 07:28:58] 2026-02-04 06:28:11,229 | INFO     | executing command: ls -lF /scratch/boinc/var/slot24/slots/0
[2026-02-04 07:28:58] 2026-02-04 06:28:11,249 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 07:28:58] 2026-02-04 06:28:11,251 | INFO     | job 7000585355 has completed (purged errors)
[2026-02-04 07:28:58] 2026-02-04 06:28:11,252 | INFO     | overall cleanup function is called
[2026-02-04 07:28:58] 2026-02-04 06:28:12,257 | INFO     | --- collectZombieJob: --- 10, [3815878]
[2026-02-04 07:28:58] 2026-02-04 06:28:12,257 | INFO     | zombie collector waiting for pid 3815878
[2026-02-04 07:28:58] 2026-02-04 06:28:12,258 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 07:28:58] 2026-02-04 06:28:12,258 | INFO     | collected zombie processes
[2026-02-04 07:28:58] 2026-02-04 06:28:12,258 | INFO     | will attempt to kill all subprocesses of pid=3815878
[2026-02-04 07:28:58] 2026-02-04 06:28:12,572 | INFO     | process IDs to be killed: [3815878] (in reverse order)
[2026-02-04 07:28:58] 2026-02-04 06:28:12,681 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 07:28:58] 2026-02-04 06:28:12,682 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 07:28:58] 2026-02-04 06:28:12,692 | INFO     | did not find any defunct processes belonging to 3815878
[2026-02-04 07:28:58] 2026-02-04 06:28:12,702 | INFO     | did not find any defunct processes belonging to 3815878
[2026-02-04 07:28:58] 2026-02-04 06:28:12,702 | INFO     | ready for new job
[2026-02-04 07:28:58] 2026-02-04 06:28:12,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 07:28:58] 2026-02-04 06:28:12,705 | INFO     | **************************************
[2026-02-04 07:28:58] 2026-02-04 06:28:12,705 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 07:28:58] 2026-02-04 06:28:12,705 | INFO     | **************************************
[2026-02-04 07:28:58] 2026-02-04 06:28:12,705 | INFO     | 
[2026-02-04 07:28:58] 2026-02-04 06:28:12,709 | INFO     | architecture information:
[2026-02-04 07:28:58] 2026-02-04 06:28:12,709 | INFO     | executing command: cat /etc/os-release
[2026-02-04 07:28:58] 2026-02-04 06:28:12,725 | INFO     | cat /etc/os-release:
[2026-02-04 07:28:58] NAME="CentOS Linux"
[2026-02-04 07:28:58] VERSION="7 (Core)"
[2026-02-04 07:28:58] ID="centos"
[2026-02-04 07:28:58] ID_LIKE="rhel fedora"
[2026-02-04 07:28:58] VERSION_ID="7"
[2026-02-04 07:28:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 07:28:58] ANSI_COLOR="0;31"
[2026-02-04 07:28:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 07:28:58] HOME_URL="https://www.centos.org/"
[2026-02-04 07:28:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 07:28:58] 
[2026-02-04 07:28:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 07:28:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 07:28:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 07:28:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 07:28:58] 
[2026-02-04 07:28:58] 2026-02-04 06:28:12,725 | INFO     | **************************************
[2026-02-04 07:28:58] 2026-02-04 06:28:13,228 | INFO     | executing command: df -mP /scratch/boinc/var/slot24/slots/0
[2026-02-04 07:28:58] 2026-02-04 06:28:13,246 | INFO     | sufficient remaining disk space (643127312384 B)
[2026-02-04 07:28:58] 2026-02-04 06:28:13,246 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 07:28:58] 2026-02-04 06:28:13,246 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 07:28:58] 2026-02-04 06:28:13,246 | INFO     | update_server=False
[2026-02-04 07:28:58] 2026-02-04 06:28:13,247 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 07:28:58] 2026-02-04 06:28:13,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 07:28:58] 2026-02-04 06:28:13,443 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-02-04 07:28:58] 2026-02-04 06:28:13,443 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-02-04 07:28:58] 2026-02-04 06:28:13,444 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:28:58] 2026-02-04 06:28:13,444 | INFO     | will abort loop
[2026-02-04 07:28:58] 2026-02-04 06:28:13,904 | INFO     | all job control threads have been joined
[2026-02-04 07:28:58] 2026-02-04 06:28:14,003 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 07:28:58] 2026-02-04 06:28:14,172 | INFO     | all data control threads have been joined
[2026-02-04 07:28:58] 2026-02-04 06:28:14,251 | INFO     | [job] retrieve thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:14,448 | INFO     | [job] job monitor thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:14,594 | INFO     | [data] copytool_in thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:14,643 | INFO     | all payload control threads have been joined
[2026-02-04 07:28:58] 2026-02-04 06:28:14,726 | INFO     | [payload] validate_post thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:14,909 | INFO     | [job] control thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,178 | INFO     | [data] control thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,249 | INFO     | [data] copytool_out thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,301 | INFO     | [job] validate thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,440 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,441 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,491 | INFO     | [payload] failed_post thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,554 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,644 | INFO     | [payload] control thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:15,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 07:28:58] 2026-02-04 06:28:16,861 | INFO     | [job] queue monitor thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:18,008 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:23,960 | INFO     | job.realtimelogging is not enabled
[2026-02-04 07:28:58] 2026-02-04 06:28:24,965 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 07:28:58] 2026-02-04 06:28:32,840 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-02-04 07:28:58] 2026-02-04 06:28:43,775 | INFO     | PID=3811129 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 07:28:58] 2026-02-04 06:28:43,776 | INFO     | .. there are 11 such processes running
[2026-02-04 07:28:58] 2026-02-04 06:28:43,776 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 07:28:58] 2026-02-04 06:28:43,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 07:28:58] 2026-02-04 06:28:43,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 07:28:58] 2026-02-04 06:28:53,419 | INFO     | [monitor] cgroup control has ended
[2026-02-04 07:28:58] 2026-02-04 06:28:53,501 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22495224633152)>', '<ExcThread(monitor, started 22494974301952)>']
[2026-02-04 07:28:58] 2026-02-04 06:28:53,821 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 07:28:58] 2026-02-04 06:28:53,821 | INFO     | [monitor] control thread has ended
[2026-02-04 07:28:58] 2026-02-04 06:28:58,527 | INFO     | all workflow threads have been joined
[2026-02-04 07:28:58] 2026-02-04 06:28:58,527 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 07:28:58] 2026-02-04 06:28:58,528 | INFO     | traces error code: 0
[2026-02-04 07:28:58] 2026-02-04 06:28:58,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 07:28:58] 2026-02-04 06:28:58,679 [wrapper] ==== pilot stdout END ====
[2026-02-04 07:28:58] 2026-02-04 06:28:58,682 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 07:28:58] 2026-02-04 06:28:58,684 [wrapper] pilotpid: 3811129
[2026-02-04 07:28:58] 2026-02-04 06:28:58,686 [wrapper] Pilot exit status: 0
[2026-02-04 07:28:58] 2026-02-04 06:28:58,696 [wrapper] pandaids: 7000585355
[2026-02-04 07:28:58] 2026-02-04 06:28:58,762 [wrapper] cleanup supervisor_pilot 4024661 3811130
[2026-02-04 07:28:58] 2026-02-04 06:28:58,764 [wrapper] Test setup, not cleaning
[2026-02-04 07:28:58] 2026-02-04 06:28:58,767 [wrapper] apfmon messages muted
[2026-02-04 07:28:58] 2026-02-04 06:28:58,769 [wrapper] ==== wrapper stdout END ====
[2026-02-04 07:28:58] 2026-02-04 06:28:58,772 [wrapper] ==== wrapper stderr END ====
[2026-02-04 07:28:58]  *** Error codes and diagnostics ***
[2026-02-04 07:28:58]     "exeErrorCode": 0,
[2026-02-04 07:28:58]     "exeErrorDiag": "",
[2026-02-04 07:28:58]     "pilotErrorCode": 0,
[2026-02-04 07:28:58]     "pilotErrorDiag": "",
[2026-02-04 07:28:58]  *** Listing of results directory ***
[2026-02-04 07:28:58] total 675244
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc    584422 Feb  4 02:26 pilot3.tar.gz
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc      5111 Feb  4 02:27 queuedata.json
[2026-02-04 07:28:58] -rwx------ 1 boinc boinc     36322 Feb  4 02:28 runpilot2-wrapper.sh
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc       100 Feb  4 04:43 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 07:28:58] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 04:43 run_atlas
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc       105 Feb  4 04:43 job.xml
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc      6636 Feb  4 04:43 init_data.xml
[2026-02-04 07:28:58] -rw-r--r-- 2 boinc boinc 500740998 Feb  4 04:43 EVNT.48317949._000226.pool.root.1
[2026-02-04 07:28:58] -rw-r--r-- 2 boinc boinc     15845 Feb  4 04:43 start_atlas.sh
[2026-02-04 07:28:58] drwxrwx--x 2 boinc boinc      4096 Feb  4 04:43 shared
[2026-02-04 07:28:58] -rw-r--r-- 2 boinc boinc    597760 Feb  4 04:43 input.tar.gz
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc         0 Feb  4 04:43 boinc_lockfile
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc      2523 Feb  4 04:43 pandaJob.out
[2026-02-04 07:28:58] -rw------- 1 boinc boinc   1009244 Feb  4 04:43 agis_schedconf.cvmfs.json
[2026-02-04 07:28:58] -rw------- 1 boinc boinc   1511668 Feb  4 04:43 agis_ddmendpoints.agis.ALL.json
[2026-02-04 07:28:58] -rw------- 1 boinc boinc       452 Feb  4 04:43 workernode_map.json
[2026-02-04 07:28:58] drwx------ 5 boinc boinc      4096 Feb  4 04:43 pilot3
[2026-02-04 07:28:58] -rw------- 1 boinc boinc 183260625 Feb  4 07:27 HITS.48317952._011967.pool.root.1
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc       530 Feb  4 07:27 boinc_task_state.xml
[2026-02-04 07:28:58] -rw------- 1 boinc boinc        95 Feb  4 07:27 pilot_heartbeat.json
[2026-02-04 07:28:58] -rw------- 1 boinc boinc      1032 Feb  4 07:27 memory_monitor_summary.json
[2026-02-04 07:28:58] -rw------- 1 boinc boinc    335798 Feb  4 07:28 log.48317952._011967.job.log.tgz.1
[2026-02-04 07:28:58] -rw------- 1 boinc boinc      6397 Feb  4 07:28 heartbeat.json
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc      8192 Feb  4 07:28 boinc_mmap_file
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc        27 Feb  4 07:28 wrapper_checkpoint.txt
[2026-02-04 07:28:58] -rw------- 1 boinc boinc      5088 Feb  4 07:28 pilotlog.txt
[2026-02-04 07:28:58] -rw------- 1 boinc boinc   1415736 Feb  4 07:28 log.48317952._011967.job.log.1
[2026-02-04 07:28:58] -rw------- 1 boinc boinc       357 Feb  4 07:28 output.list
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc       620 Feb  4 07:28 runtime_log
[2026-02-04 07:28:58] -rw------- 1 boinc boinc   1771520 Feb  4 07:28 result.tar.gz
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc      9204 Feb  4 07:28 runtime_log.err
[2026-02-04 07:28:58] -rw------- 1 boinc boinc       662 Feb  4 07:28 YJoKDmtrg78n9Rq4apOajLDm4fhM0noT9bVooX4SDmZwVKDmoRReBn.diag
[2026-02-04 07:28:58] -rw-r--r-- 1 boinc boinc     20816 Feb  4 07:28 stderr.txt
[2026-02-04 07:28:58] HITS file was successfully produced:
[2026-02-04 07:28:58] -rw------- 1 boinc boinc 183260625 Feb  4 07:27 shared/HITS.pool.root.1
[2026-02-04 07:28:58]  *** Contents of shared directory: ***
[2026-02-04 07:28:58] total 670316
[2026-02-04 07:28:58] -rw-r--r-- 2 boinc boinc 500740998 Feb  4 04:43 ATLAS.root_0
[2026-02-04 07:28:58] -rw-r--r-- 2 boinc boinc     15845 Feb  4 04:43 start_atlas.sh
[2026-02-04 07:28:58] -rw-r--r-- 2 boinc boinc    597760 Feb  4 04:43 input.tar.gz
[2026-02-04 07:28:58] -rw------- 1 boinc boinc 183260625 Feb  4 07:27 HITS.pool.root.1
[2026-02-04 07:28:58] -rw------- 1 boinc boinc   1771520 Feb  4 07:28 result.tar.gz
07:29:00 (3807376): run_atlas exited; CPU time 38323.891361
07:29:00 (3807376): called boinc_finish(0)

</stderr_txt>
]]>

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