Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:35:43 (3417567): wrapper (7.7.26015): starting
02:35:43 (3417567): wrapper: running run_atlas (--nthreads 4)
[2026-02-05 02:35:43] Arguments: --nthreads 4
[2026-02-05 02:35:43] Threads: 4
[2026-02-05 02:35:43] Checking for CVMFS
[2026-02-05 02:35:43] No cvmfs_config command found, will try listing directly
[2026-02-05 02:35:43] CVMFS is ok
[2026-02-05 02:35:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-05 02:35:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-05 02:35:43] Further information can be found at the LHC@home message board.
[2026-02-05 02:35:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-05 02:35:43] Checking for apptainer binary...
[2026-02-05 02:35:43] which: no apptainer in ((null))
[2026-02-05 02:35:43] apptainer is not installed, using version from CVMFS
[2026-02-05 02:35:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-05 02:35:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2026-02-05 02:35:43] apptainer works
[2026-02-05 02:35:43] Set ATHENA_PROC_NUMBER=4
[2026-02-05 02:35:43] Set ATHENA_CORE_NUMBER=4
[2026-02-05 02:35:43] Starting ATLAS job with PandaID=7000017286
[2026-02-05 02:35:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-05 05:51:36]  *** The last 200 lines of the pilot log: ***
[2026-02-05 05:51:36] 2026-02-05 04:49:49,695 | INFO     | log transfer has been attempted: DONE
[2026-02-05 05:51:36] 2026-02-05 04:49:49,695 | INFO     | job 7000017286 has finished - writing final server update
[2026-02-05 05:51:36] 2026-02-05 04:49:49,696 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2777558/.job.ad'
[2026-02-05 05:51:36] 2026-02-05 04:49:49,696 | INFO     | total number of processed events: 400 (read)
[2026-02-05 05:51:36] 2026-02-05 04:49:49,706 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-7000017286/memory_monitor_summary.json (trf name=prmon)
[2026-02-05 05:51:36] 2026-02-05 04:49:49,707 | INFO     | extracted standard info from prmon json
[2026-02-05 05:51:36] 2026-02-05 04:49:49,707 | INFO     | extracted standard memory fields from prmon json
[2026-02-05 05:51:36] 2026-02-05 04:49:49,707 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-05 05:51:36] 2026-02-05 04:49:49,708 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-05 05:51:36] 2026-02-05 04:49:49,708 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-05 05:51:36] 2026-02-05 04:49:49,711 | INFO     | fitting pss+swap vs Time
[2026-02-05 05:51:36] 2026-02-05 04:49:49,712 | INFO     | sum of square deviations: 2160561440.0
[2026-02-05 05:51:36] 2026-02-05 04:49:49,713 | INFO     | sum of deviations: -49443926735.99999
[2026-02-05 05:51:36] 2026-02-05 04:49:49,713 | INFO     | mean x: 1770261179.0
[2026-02-05 05:51:36] 2026-02-05 04:49:49,713 | INFO     | mean y: 2397218.0261780103
[2026-02-05 05:51:36] 2026-02-05 04:49:49,713 | INFO     | intersect: 40514396746.28813
[2026-02-05 05:51:36] 2026-02-05 04:49:49,714 | INFO     | chi2: 2.323541666049977
[2026-02-05 05:51:36] 2026-02-05 04:49:49,714 | INFO     | sum of square deviations: 1995283922.5
[2026-02-05 05:51:36] 2026-02-05 04:49:49,715 | INFO     | sum of deviations: -36748413518.5
[2026-02-05 05:51:36] 2026-02-05 04:49:49,715 | INFO     | mean x: 1770261026.5
[2026-02-05 05:51:36] 2026-02-05 04:49:49,715 | INFO     | mean y: 2408716.704301075
[2026-02-05 05:51:36] 2026-02-05 04:49:49,716 | INFO     | intersect: 32606432386.67716
[2026-02-05 05:51:36] 2026-02-05 04:49:49,716 | INFO     | chi2: 1.662885759114947
[2026-02-05 05:51:36] 2026-02-05 04:49:49,716 | INFO     | current chi2=1.662885759114947 (change=28.433142240919896 %)
[2026-02-05 05:51:36] 2026-02-05 04:49:49,716 | INFO     | sum of square deviations: 1838657730.0
[2026-02-05 05:51:36] 2026-02-05 04:49:49,717 | INFO     | sum of deviations: -35267965203.99999
[2026-02-05 05:51:36] 2026-02-05 04:49:49,717 | INFO     | mean x: 1770260874.0
[2026-02-05 05:51:36] 2026-02-05 04:49:49,718 | INFO     | mean y: 2410158.5138121545
[2026-02-05 05:51:36] 2026-02-05 04:49:49,718 | INFO     | intersect: 33958430296.222977
[2026-02-05 05:51:36] 2026-02-05 04:49:49,718 | INFO     | chi2: 1.6573045192471707
[2026-02-05 05:51:36] 2026-02-05 04:49:49,718 | INFO     | current chi2=1.6573045192471707 (change=0.33563579681787165 %)
[2026-02-05 05:51:36] 2026-02-05 04:49:49,718 | INFO     | right removable region: 180
[2026-02-05 05:51:36] 2026-02-05 04:49:49,718 | INFO     | sum of square deviations: 1995283922.5
[2026-02-05 05:51:36] 2026-02-05 04:49:49,720 | INFO     | sum of deviations: -70178086504.5
[2026-02-05 05:51:36] 2026-02-05 04:49:49,720 | INFO     | mean x: 1770261331.5
[2026-02-05 05:51:36] 2026-02-05 04:49:49,720 | INFO     | mean y: 2416014.7365591396
[2026-02-05 05:51:36] 2026-02-05 04:49:49,720 | INFO     | intersect: 62266012416.55558
[2026-02-05 05:51:36] 2026-02-05 04:49:49,720 | INFO     | chi2: 1.0682866611803459
[2026-02-05 05:51:36] 2026-02-05 04:49:49,720 | INFO     | current chi2=1.0682866611803459 (change=54.02334820203873 %)
[2026-02-05 05:51:36] 2026-02-05 04:49:49,721 | INFO     | sum of square deviations: 1838657730.0
[2026-02-05 05:51:36] 2026-02-05 04:49:49,722 | INFO     | sum of deviations: -61854738893.0
[2026-02-05 05:51:36] 2026-02-05 04:49:49,722 | INFO     | mean x: 1770261484.0
[2026-02-05 05:51:36] 2026-02-05 04:49:49,722 | INFO     | mean y: 2407903.0220994474
[2026-02-05 05:51:36] 2026-02-05 04:49:49,722 | INFO     | intersect: 59556211788.617874
[2026-02-05 05:51:36] 2026-02-05 04:49:49,722 | INFO     | chi2: 1.0570817696023722
[2026-02-05 05:51:36] 2026-02-05 04:49:49,722 | INFO     | current chi2=1.0570817696023722 (change=1.0488656261600628 %)
[2026-02-05 05:51:36] 2026-02-05 04:49:49,722 | INFO     | left removable region: 20
[2026-02-05 05:51:36] 2026-02-05 04:49:49,723 | INFO     | sum of square deviations: 1270051720.0
[2026-02-05 05:51:36] 2026-02-05 04:49:49,724 | INFO     | sum of deviations: -30910875717.5
[2026-02-05 05:51:36] 2026-02-05 04:49:49,724 | INFO     | mean x: 1770261453.5
[2026-02-05 05:51:36] 2026-02-05 04:49:49,724 | INFO     | mean y: 2402652.15625
[2026-02-05 05:51:36] 2026-02-05 04:49:49,724 | INFO     | intersect: 43087523450.71665
[2026-02-05 05:51:36] 2026-02-05 04:49:49,724 | INFO     | chi2: 0.31434617242111945
[2026-02-05 05:51:36] 2026-02-05 04:49:49,724 | INFO     | current memory leak: -24.34 B/s (using 160 data points, chi2=0.31)
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | could have reported an average CPU frequency of 2641 MHz (10 samples)
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | ..............................
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | . Timing measurements:
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | . get job = 0 s
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | . initial setup = 6 s
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | . payload setup = 6 s
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | . stage-in = 0 s
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | . payload execution = 11601 s
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | . stage-out = 1 s
[2026-02-05 05:51:36] 2026-02-05 04:49:49,725 | INFO     | . log creation = 0 s
[2026-02-05 05:51:36] 2026-02-05 04:49:49,726 | INFO     | ..............................
[2026-02-05 05:51:36] 2026-02-05 04:49:50,195 | INFO     | 
[2026-02-05 05:51:36] 2026-02-05 04:49:50,195 | INFO     | job summary report
[2026-02-05 05:51:36] 2026-02-05 04:49:50,195 | INFO     | --------------------------------------------------
[2026-02-05 05:51:36] 2026-02-05 04:49:50,195 | INFO     | PanDA job id: 7000017286
[2026-02-05 05:51:36] 2026-02-05 04:49:50,195 | INFO     | task id: 48317892
[2026-02-05 05:51:36] 2026-02-05 04:49:50,195 | INFO     | errors: (none)
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | pilot state: finished 
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | transexitcode: 0
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | exeerrorcode: 0
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | exeerrordiag: 
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | exitcode: 0
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | exitmsg: OK
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | cpuconsumptiontime: 44914 s
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | nevents: 400
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | neventsw: 0
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | pid: 3426486
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | pgrp: 3426486
[2026-02-05 05:51:36] 2026-02-05 04:49:50,196 | INFO     | corecount: 4
[2026-02-05 05:51:36] 2026-02-05 04:49:50,197 | INFO     | event service: False
[2026-02-05 05:51:36] 2026-02-05 04:49:50,197 | INFO     | sizes: {0: 2277801, 1: 2278262, 11: 2278262, 11611: 2307674, 11613: 2316694, 11616: 2316750, 11617: 2317072}
[2026-02-05 05:51:36] 2026-02-05 04:49:50,197 | INFO     | --------------------------------------------------
[2026-02-05 05:51:36] 2026-02-05 04:49:50,197 | INFO     | 
[2026-02-05 05:51:36] 2026-02-05 04:49:50,197 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2026-02-05 05:51:36] 2026-02-05 04:49:50,219 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,219 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,220 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | job 7000017286 has completed (purged errors)
[2026-02-05 05:51:36] 2026-02-05 04:49:50,221 | INFO     | overall cleanup function is called
[2026-02-05 05:51:36] 2026-02-05 04:49:51,228 | INFO     | --- collectZombieJob: --- 10, [3426486]
[2026-02-05 05:51:36] 2026-02-05 04:49:51,229 | INFO     | zombie collector waiting for pid 3426486
[2026-02-05 05:51:36] 2026-02-05 04:49:51,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-05 05:51:36] 2026-02-05 04:49:51,229 | INFO     | collected zombie processes
[2026-02-05 05:51:36] 2026-02-05 04:49:51,229 | INFO     | will attempt to kill all subprocesses of pid=3426486
[2026-02-05 05:51:36] 2026-02-05 04:49:51,592 | INFO     | process IDs to be killed: [3426486] (in reverse order)
[2026-02-05 05:51:36] 2026-02-05 04:49:51,705 | WARNING  | found no corresponding commands to process id(s)
[2026-02-05 05:51:36] 2026-02-05 04:49:51,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-05 05:51:36] 2026-02-05 04:49:51,718 | INFO     | did not find any defunct processes belonging to 3426486
[2026-02-05 05:51:36] 2026-02-05 04:49:51,730 | INFO     | did not find any defunct processes belonging to 3426486
[2026-02-05 05:51:36] 2026-02-05 04:49:51,730 | INFO     | ready for new job
[2026-02-05 05:51:36] 2026-02-05 04:49:51,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-05 05:51:36] 2026-02-05 04:49:51,732 | INFO     | **************************************
[2026-02-05 05:51:36] 2026-02-05 04:49:51,733 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-05 05:51:36] 2026-02-05 04:49:51,733 | INFO     | **************************************
[2026-02-05 05:51:36] 2026-02-05 04:49:51,733 | INFO     | 
[2026-02-05 05:51:36] 2026-02-05 04:49:51,737 | INFO     | architecture information:
[2026-02-05 05:51:36] 2026-02-05 04:49:51,737 | INFO     | executing command: cat /etc/os-release
[2026-02-05 05:51:36] 2026-02-05 04:49:51,754 | INFO     | cat /etc/os-release:
[2026-02-05 05:51:36] NAME="CentOS Linux"
[2026-02-05 05:51:36] VERSION="7 (Core)"
[2026-02-05 05:51:36] ID="centos"
[2026-02-05 05:51:36] ID_LIKE="rhel fedora"
[2026-02-05 05:51:36] VERSION_ID="7"
[2026-02-05 05:51:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-05 05:51:36] ANSI_COLOR="0;31"
[2026-02-05 05:51:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-05 05:51:36] HOME_URL="https://www.centos.org/"
[2026-02-05 05:51:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-05 05:51:36] 
[2026-02-05 05:51:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-05 05:51:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-05 05:51:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-05 05:51:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-05 05:51:36] 
[2026-02-05 05:51:36] 2026-02-05 04:49:51,754 | INFO     | **************************************
[2026-02-05 05:51:36] 2026-02-05 04:49:52,257 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2026-02-05 05:51:36] 2026-02-05 04:49:52,273 | INFO     | sufficient remaining disk space (667934523392 B)
[2026-02-05 05:51:36] 2026-02-05 04:49:52,274 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-05 05:51:36] 2026-02-05 04:49:52,274 | INFO     | current server update state: UPDATING_FINAL
[2026-02-05 05:51:36] 2026-02-05 04:49:52,274 | INFO     | update_server=False
[2026-02-05 05:51:36] 2026-02-05 04:49:52,274 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-05 05:51:36] 2026-02-05 04:49:52,274 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-05 05:51:36] 2026-02-05 04:49:52,479 | INFO     | all data control threads have been joined
[2026-02-05 05:51:36] 2026-02-05 04:49:52,981 | INFO     | all job control threads have been joined
[2026-02-05 05:51:36] 2026-02-05 04:49:53,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-05 05:51:36] 2026-02-05 04:49:53,140 | INFO     | aborting loop
[2026-02-05 05:51:36] 2026-02-05 04:49:53,279 | INFO     | [job] retrieve thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:53,297 | INFO     | [payload] validate_pre thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:53,373 | INFO     | all payload control threads have been joined
[2026-02-05 05:51:36] 2026-02-05 04:49:53,398 | INFO     | [payload] failed_post thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:53,484 | INFO     | [data] control thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:53,658 | INFO     | [data] copytool_in thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:53,987 | INFO     | [job] control thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:54,145 | INFO     | [job] job monitor thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:54,154 | INFO     | [payload] execute_payloads thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:54,160 | INFO     | [job] validate thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:54,279 | INFO     | [data] copytool_out thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:54,378 | INFO     | [payload] control thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:54,637 | INFO     | [job] create_data_payload thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:54,646 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-05 05:51:36] 2026-02-05 04:49:54,650 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:54,830 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-05 05:51:36] 2026-02-05 04:49:54,851 | INFO     | [payload] validate_post thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:55,836 | INFO     | [job] queue monitor thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:49:58,649 | INFO     | [data] queue_monitor thread has finished
[2026-02-05 05:51:36] 2026-02-05 04:50:19,440 | INFO     | [monitor] cgroup control has ended
[2026-02-05 05:51:36] 2026-02-05 04:50:19,778 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23116072085312)>', '<ExcThread(monitor, started 23115831977728)>']
[2026-02-05 05:51:36] 2026-02-05 04:50:23,017 | INFO     | PID=3421682 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-05 05:51:36] 2026-02-05 04:50:23,018 | INFO     | .. there are 4 such processes running
[2026-02-05 05:51:36] 2026-02-05 04:50:23,019 | INFO     | found 0 job(s) in 20 queues
[2026-02-05 05:51:36] 2026-02-05 04:50:23,019 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-05 05:51:36] 2026-02-05 04:50:23,019 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-05 05:51:36] 2026-02-05 04:50:23,019 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-05 05:51:36] 2026-02-05 04:50:23,019 | INFO     | [monitor] control thread has ended
[2026-02-05 05:51:36] 2026-02-05 04:50:24,795 | INFO     | all workflow threads have been joined
[2026-02-05 05:51:36] 2026-02-05 04:50:24,796 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-05 05:51:36] 2026-02-05 04:50:24,796 | INFO     | traces error code: 0
[2026-02-05 05:51:36] 2026-02-05 04:50:24,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-05 05:51:36] 2026-02-05 04:50:24,946 [wrapper] ==== pilot stdout END ====
[2026-02-05 05:51:36] 2026-02-05 04:50:24,949 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-05 05:51:36] 2026-02-05 04:50:24,952 [wrapper] pilotpid: 3421682
[2026-02-05 05:51:36] 2026-02-05 04:50:24,955 [wrapper] Pilot exit status: 0
[2026-02-05 05:51:36] 2026-02-05 04:50:24,966 [wrapper] pandaids: 7000017286
[2026-02-05 05:51:36] 2026-02-05 04:50:25,043 [wrapper] cleanup supervisor_pilot 3552270 3421683
[2026-02-05 05:51:36] 2026-02-05 04:50:25,047 [wrapper] Test setup, not cleaning
[2026-02-05 05:51:36] 2026-02-05 04:50:25,050 [wrapper] apfmon messages muted
[2026-02-05 05:51:36] 2026-02-05 04:50:25,053 [wrapper] ==== wrapper stdout END ====
[2026-02-05 05:51:36] 2026-02-05 04:50:25,056 [wrapper] ==== wrapper stderr END ====
[2026-02-05 05:51:36]  *** Error codes and diagnostics ***
[2026-02-05 05:51:36]     "exeErrorCode": 0,
[2026-02-05 05:51:36]     "exeErrorDiag": "",
[2026-02-05 05:51:36]     "pilotErrorCode": 0,
[2026-02-05 05:51:36]     "pilotErrorDiag": "",
[2026-02-05 05:51:36]  *** Listing of results directory ***
[2026-02-05 05:51:36] total 676316
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc    584422 Feb  3 18:17 pilot3.tar.gz
[2026-02-05 05:51:36] -rwx------ 1 boinc boinc     36322 Feb  3 18:19 runpilot2-wrapper.sh
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc      5111 Feb  3 18:23 queuedata.json
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc       100 Feb  5 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-05 05:51:36] -rwxr-xr-x 1 boinc boinc      7986 Feb  5 02:35 run_atlas
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc       105 Feb  5 02:35 job.xml
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc      6640 Feb  5 02:35 init_data.xml
[2026-02-05 05:51:36] -rw-r--r-- 2 boinc boinc 491519768 Feb  5 02:35 EVNT.48317889._000242.pool.root.1
[2026-02-05 05:51:36] drwxrwx--x 2 boinc boinc      4096 Feb  5 02:35 shared
[2026-02-05 05:51:36] -rw-r--r-- 2 boinc boinc    597757 Feb  5 02:35 input.tar.gz
[2026-02-05 05:51:36] -rw-r--r-- 2 boinc boinc     15845 Feb  5 02:35 start_atlas.sh
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc         0 Feb  5 02:35 boinc_lockfile
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc      2522 Feb  5 02:35 pandaJob.out
[2026-02-05 05:51:36] -rw------- 1 boinc boinc   1009544 Feb  5 02:35 agis_schedconf.cvmfs.json
[2026-02-05 05:51:36] -rw------- 1 boinc boinc       452 Feb  5 02:36 workernode_map.json
[2026-02-05 05:51:36] drwx------ 5 boinc boinc      4096 Feb  5 02:36 pilot3
[2026-02-05 05:51:36] -rw------- 1 boinc boinc 193061071 Feb  5 05:49 HITS.48317892._012684.pool.root.1
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc       530 Feb  5 05:49 boinc_task_state.xml
[2026-02-05 05:51:36] -rw------- 1 boinc boinc      1036 Feb  5 05:49 memory_monitor_summary.json
[2026-02-05 05:51:36] -rw------- 1 boinc boinc   1511668 Feb  5 05:49 agis_ddmendpoints.agis.ALL.json
[2026-02-05 05:51:36] -rw------- 1 boinc boinc    370345 Feb  5 05:49 log.48317892._012684.job.log.tgz.1
[2026-02-05 05:51:36] -rw------- 1 boinc boinc      6411 Feb  5 05:49 heartbeat.json
[2026-02-05 05:51:36] -rw------- 1 boinc boinc        95 Feb  5 05:50 pilot_heartbeat.json
[2026-02-05 05:51:36] -rw------- 1 boinc boinc      4829 Feb  5 05:50 pilotlog.txt
[2026-02-05 05:51:36] -rw------- 1 boinc boinc   1643388 Feb  5 05:50 log.48317892._012684.job.log.1
[2026-02-05 05:51:36] -rw------- 1 boinc boinc       357 Feb  5 05:50 output.list
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc       620 Feb  5 05:50 runtime_log
[2026-02-05 05:51:36] -rw------- 1 boinc boinc   2027520 Feb  5 05:50 result.tar.gz
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc      9205 Feb  5 05:50 runtime_log.err
[2026-02-05 05:51:36] -rw------- 1 boinc boinc       665 Feb  5 05:50 QXxNDmlEZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmKeVKDmq3DHAn.diag
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc        27 Feb  5 05:51 wrapper_checkpoint.txt
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc      8192 Feb  5 05:51 boinc_mmap_file
[2026-02-05 05:51:36] -rw-r--r-- 1 boinc boinc     20886 Feb  5 05:51 stderr.txt
[2026-02-05 05:51:36] HITS file was successfully produced:
[2026-02-05 05:51:36] -rw------- 1 boinc boinc 193061071 Feb  5 05:49 shared/HITS.pool.root.1
[2026-02-05 05:51:36]  *** Contents of shared directory: ***
[2026-02-05 05:51:36] total 671128
[2026-02-05 05:51:36] -rw-r--r-- 2 boinc boinc 491519768 Feb  5 02:35 ATLAS.root_0
[2026-02-05 05:51:36] -rw-r--r-- 2 boinc boinc    597757 Feb  5 02:35 input.tar.gz
[2026-02-05 05:51:36] -rw-r--r-- 2 boinc boinc     15845 Feb  5 02:35 start_atlas.sh
[2026-02-05 05:51:36] -rw------- 1 boinc boinc 193061071 Feb  5 05:49 HITS.pool.root.1
[2026-02-05 05:51:36] -rw------- 1 boinc boinc   2027520 Feb  5 05:50 result.tar.gz
05:51:38 (3417567): run_atlas exited; CPU time 45458.883514
05:51:38 (3417567): called boinc_finish(0)

</stderr_txt>
]]>

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