Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:23:16 (1053573): wrapper (7.7.26015): starting
10:23:16 (1053573): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 10:23:16] Arguments: --nthreads 4
[2026-02-04 10:23:16] Threads: 4
[2026-02-04 10:23:16] Checking for CVMFS
[2026-02-04 10:23:16] No cvmfs_config command found, will try listing directly
[2026-02-04 10:23:16] CVMFS is ok
[2026-02-04 10:23:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 10:23:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 10:23:16] Further information can be found at the LHC@home message board.
[2026-02-04 10:23:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 10:23:16] Checking for apptainer binary...
[2026-02-04 10:23:16] which: no apptainer in ((null))
[2026-02-04 10:23:16] apptainer is not installed, using version from CVMFS
[2026-02-04 10:23:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 10:23:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-02-04 10:23:16] apptainer works
[2026-02-04 10:23:16] Set ATHENA_PROC_NUMBER=4
[2026-02-04 10:23:16] Set ATHENA_CORE_NUMBER=4
[2026-02-04 10:23:16] Starting ATLAS job with PandaID=6994435137
[2026-02-04 10:23:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 13:21:02]  *** The last 200 lines of the pilot log: ***
[2026-02-04 13:21:02] 2026-02-04 12:19:57,234 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,139 | INFO     | job 6994435137 has state=finished
[2026-02-04 13:21:02] 2026-02-04 12:19:58,140 | INFO     | preparing for final server update for job 6994435137 in state='finished'
[2026-02-04 13:21:02] 2026-02-04 12:19:58,140 | INFO     | reading metadata from: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6994435137/jobReport.json
[2026-02-04 13:21:02] 2026-02-04 12:19:58,142 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot92/slots/0/workernode_map.json
[2026-02-04 13:21:02] 2026-02-04 12:19:58,143 | INFO     | this job has now completed (state=finished)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,143 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,143 | INFO     | log transfer has been attempted: DONE
[2026-02-04 13:21:02] 2026-02-04 12:19:58,143 | INFO     | job 6994435137 has finished - writing final server update
[2026-02-04 13:21:02] 2026-02-04 12:19:58,143 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_3203292/.job.ad'
[2026-02-04 13:21:02] 2026-02-04 12:19:58,143 | INFO     | total number of processed events: 400 (read)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,167 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/PanDA_Pilot-6994435137/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,167 | INFO     | extracted standard info from prmon json
[2026-02-04 13:21:02] 2026-02-04 12:19:58,167 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 13:21:02] 2026-02-04 12:19:58,167 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 13:21:02] 2026-02-04 12:19:58,168 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 13:21:02] 2026-02-04 12:19:58,168 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 13:21:02] 2026-02-04 12:19:58,171 | INFO     | fitting pss+swap vs Time
[2026-02-04 13:21:02] 2026-02-04 12:19:58,171 | INFO     | sum of square deviations: 1605466076.994215
[2026-02-04 13:21:02] 2026-02-04 12:19:58,172 | INFO     | sum of deviations: 8733299304.346819
[2026-02-04 13:21:02] 2026-02-04 12:19:58,172 | INFO     | mean x: 1770202292.0057805
[2026-02-04 13:21:02] 2026-02-04 12:19:58,172 | INFO     | mean y: 2331162.6531791906
[2026-02-04 13:21:02] 2026-02-04 12:19:58,173 | INFO     | intersect: -9627088397.722206
[2026-02-04 13:21:02] 2026-02-04 12:19:58,173 | INFO     | chi2: 1.3052602647252258
[2026-02-04 13:21:02] 2026-02-04 12:19:58,173 | INFO     | sum of square deviations: 1470245241.994046
[2026-02-04 13:21:02] 2026-02-04 12:19:58,174 | INFO     | sum of deviations: 8274054825.79167
[2026-02-04 13:21:02] 2026-02-04 12:19:58,174 | INFO     | mean x: 1770202139.5059524
[2026-02-04 13:21:02] 2026-02-04 12:19:58,174 | INFO     | mean y: 2330644.7083333335
[2026-02-04 13:21:02] 2026-02-04 12:19:58,175 | INFO     | intersect: -9959782570.595156
[2026-02-04 13:21:02] 2026-02-04 12:19:58,175 | INFO     | chi2: 1.3058355197704452
[2026-02-04 13:21:02] 2026-02-04 12:19:58,175 | INFO     | current chi2=1.3058355197704452 (change=-0.04407205679707711 %)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,175 | INFO     | right removable region: 167
[2026-02-04 13:21:02] 2026-02-04 12:19:58,175 | INFO     | sum of square deviations: 1470244631.994046
[2026-02-04 13:21:02] 2026-02-04 12:19:58,176 | INFO     | sum of deviations: -11882676930.374996
[2026-02-04 13:21:02] 2026-02-04 12:19:58,176 | INFO     | mean x: 1770202444.5059524
[2026-02-04 13:21:02] 2026-02-04 12:19:58,177 | INFO     | mean y: 2354038.875
[2026-02-04 13:21:02] 2026-02-04 12:19:58,177 | INFO     | intersect: 14309322615.182978
[2026-02-04 13:21:02] 2026-02-04 12:19:58,177 | INFO     | chi2: 0.0222403637871711
[2026-02-04 13:21:02] 2026-02-04 12:19:58,177 | INFO     | current chi2=0.0222403637871711 (change=98.29609738469645 %)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,177 | INFO     | sum of square deviations: 1342837286.9938686
[2026-02-04 13:21:02] 2026-02-04 12:19:58,178 | INFO     | sum of deviations: -10803726764.625772
[2026-02-04 13:21:02] 2026-02-04 12:19:58,178 | INFO     | mean x: 1770202597.006135
[2026-02-04 13:21:02] 2026-02-04 12:19:58,178 | INFO     | mean y: 2352749.625766871
[2026-02-04 13:21:02] 2026-02-04 12:19:58,179 | INFO     | intersect: 14244424638.245104
[2026-02-04 13:21:02] 2026-02-04 12:19:58,179 | INFO     | chi2: 0.022151186333660824
[2026-02-04 13:21:02] 2026-02-04 12:19:58,179 | INFO     | current chi2=0.022151186333660824 (change=0.4009711997684024 %)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,179 | INFO     | left removable region: 20
[2026-02-04 13:21:02] 2026-02-04 12:19:58,179 | INFO     | sum of square deviations: 984936378.9931941
[2026-02-04 13:21:02] 2026-02-04 12:19:58,180 | INFO     | sum of deviations: -8560085638.931973
[2026-02-04 13:21:02] 2026-02-04 12:19:58,180 | INFO     | mean x: 1770202719.0068028
[2026-02-04 13:21:02] 2026-02-04 12:19:58,180 | INFO     | mean y: 2349878.931972789
[2026-02-04 13:21:02] 2026-02-04 12:19:58,180 | INFO     | intersect: 15387188124.482422
[2026-02-04 13:21:02] 2026-02-04 12:19:58,181 | INFO     | chi2: 0.0204165150589304
[2026-02-04 13:21:02] 2026-02-04 12:19:58,181 | INFO     | current memory leak: -8.69 B/s (using 147 data points, chi2=0.02)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,181 | INFO     | could have reported an average CPU frequency of 2743 MHz (9 samples)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,181 | INFO     | ..............................
[2026-02-04 13:21:02] 2026-02-04 12:19:58,181 | INFO     | . Timing measurements:
[2026-02-04 13:21:02] 2026-02-04 12:19:58,181 | INFO     | . get job = 0 s
[2026-02-04 13:21:02] 2026-02-04 12:19:58,182 | INFO     | . initial setup = 7 s
[2026-02-04 13:21:02] 2026-02-04 12:19:58,182 | INFO     | . payload setup = 8 s
[2026-02-04 13:21:02] 2026-02-04 12:19:58,182 | INFO     | . stage-in = 0 s
[2026-02-04 13:21:02] 2026-02-04 12:19:58,182 | INFO     | . payload execution = 10550 s
[2026-02-04 13:21:02] 2026-02-04 12:19:58,182 | INFO     | . stage-out = 1 s
[2026-02-04 13:21:02] 2026-02-04 12:19:58,182 | INFO     | . log creation = 0 s
[2026-02-04 13:21:02] 2026-02-04 12:19:58,182 | INFO     | ..............................
[2026-02-04 13:21:02] 2026-02-04 12:19:58,271 | INFO     | 
[2026-02-04 13:21:02] 2026-02-04 12:19:58,271 | INFO     | job summary report
[2026-02-04 13:21:02] 2026-02-04 12:19:58,271 | INFO     | --------------------------------------------------
[2026-02-04 13:21:02] 2026-02-04 12:19:58,271 | INFO     | PanDA job id: 6994435137
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | task id: 48318042
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | errors: (none)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | pilot state: finished 
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | transexitcode: 0
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | exeerrorcode: 0
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | exeerrordiag: 
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | exitcode: 0
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | exitmsg: OK
[2026-02-04 13:21:02] 2026-02-04 12:19:58,272 | INFO     | cpuconsumptiontime: 40205 s
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | nevents: 400
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | neventsw: 0
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | pid: 1080353
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | pgrp: 1080353
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | corecount: 4
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | event service: False
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | sizes: {0: 2278297, 11: 2278297, 10562: 2307515, 10564: 2316535, 10566: 2316591, 10567: 2316849}
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | --------------------------------------------------
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | 
[2026-02-04 13:21:02] 2026-02-04 12:19:58,273 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-02-04 13:21:02] 2026-02-04 12:19:58,300 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,300 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,300 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,300 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,300 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,300 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,300 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 13:21:02] 2026-02-04 12:19:58,301 | INFO     | job 6994435137 has completed (purged errors)
[2026-02-04 13:21:02] 2026-02-04 12:19:58,302 | INFO     | overall cleanup function is called
[2026-02-04 13:21:02] 2026-02-04 12:19:59,311 | INFO     | --- collectZombieJob: --- 10, [1080353]
[2026-02-04 13:21:02] 2026-02-04 12:19:59,311 | INFO     | zombie collector waiting for pid 1080353
[2026-02-04 13:21:02] 2026-02-04 12:19:59,311 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 13:21:02] 2026-02-04 12:19:59,311 | INFO     | collected zombie processes
[2026-02-04 13:21:02] 2026-02-04 12:19:59,311 | INFO     | will attempt to kill all subprocesses of pid=1080353
[2026-02-04 13:21:02] 2026-02-04 12:20:00,001 | INFO     | process IDs to be killed: [1080353] (in reverse order)
[2026-02-04 13:21:02] 2026-02-04 12:20:00,229 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 13:21:02] 2026-02-04 12:20:00,230 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 13:21:02] 2026-02-04 12:20:00,260 | INFO     | did not find any defunct processes belonging to 1080353
[2026-02-04 13:21:02] 2026-02-04 12:20:00,286 | INFO     | did not find any defunct processes belonging to 1080353
[2026-02-04 13:21:02] 2026-02-04 12:20:00,286 | INFO     | ready for new job
[2026-02-04 13:21:02] 2026-02-04 12:20:00,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 13:21:02] 2026-02-04 12:20:00,288 | INFO     | **************************************
[2026-02-04 13:21:02] 2026-02-04 12:20:00,288 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 13:21:02] 2026-02-04 12:20:00,288 | INFO     | **************************************
[2026-02-04 13:21:02] 2026-02-04 12:20:00,289 | INFO     | 
[2026-02-04 13:21:02] 2026-02-04 12:20:00,297 | INFO     | architecture information:
[2026-02-04 13:21:02] 2026-02-04 12:20:00,297 | INFO     | executing command: cat /etc/os-release
[2026-02-04 13:21:02] 2026-02-04 12:20:00,319 | INFO     | cat /etc/os-release:
[2026-02-04 13:21:02] NAME="CentOS Linux"
[2026-02-04 13:21:02] VERSION="7 (Core)"
[2026-02-04 13:21:02] ID="centos"
[2026-02-04 13:21:02] ID_LIKE="rhel fedora"
[2026-02-04 13:21:02] VERSION_ID="7"
[2026-02-04 13:21:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 13:21:02] ANSI_COLOR="0;31"
[2026-02-04 13:21:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 13:21:02] HOME_URL="https://www.centos.org/"
[2026-02-04 13:21:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 13:21:02] 
[2026-02-04 13:21:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 13:21:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 13:21:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 13:21:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 13:21:02] 
[2026-02-04 13:21:02] 2026-02-04 12:20:00,320 | INFO     | **************************************
[2026-02-04 13:21:02] 2026-02-04 12:20:00,823 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-02-04 13:21:02] 2026-02-04 12:20:00,844 | INFO     | sufficient remaining disk space (3188710178816 B)
[2026-02-04 13:21:02] 2026-02-04 12:20:00,844 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 13:21:02] 2026-02-04 12:20:00,844 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 13:21:02] 2026-02-04 12:20:00,844 | INFO     | update_server=False
[2026-02-04 13:21:02] 2026-02-04 12:20:00,844 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 13:21:02] 2026-02-04 12:20:00,845 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 13:21:02] 2026-02-04 12:20:00,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 13:21:02] 2026-02-04 12:20:00,845 | INFO     | aborting loop
[2026-02-04 13:21:02] 2026-02-04 12:20:01,085 | INFO     | all payload control threads have been joined
[2026-02-04 13:21:02] 2026-02-04 12:20:01,752 | INFO     | all data control threads have been joined
[2026-02-04 13:21:02] 2026-02-04 12:20:01,846 | INFO     | [job] retrieve thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:01,850 | INFO     | [job] job monitor thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:01,872 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:01,989 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,062 | INFO     | [payload] validate_post thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,091 | INFO     | [payload] control thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,122 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,364 | INFO     | [payload] failed_post thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,414 | INFO     | all job control threads have been joined
[2026-02-04 13:21:02] 2026-02-04 12:20:02,429 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 13:21:02] 2026-02-04 12:20:02,442 | INFO     | [job] validate thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,757 | INFO     | [data] control thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,821 | INFO     | [data] copytool_in thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,851 | INFO     | [data] copytool_out thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:02,986 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:03,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 13:21:02] 2026-02-04 12:20:03,420 | INFO     | [job] control thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:04,287 | INFO     | [job] queue monitor thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:06,435 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 13:21:02] 2026-02-04 12:20:30,973 | INFO     | PID=1064506 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-04 13:21:02] 2026-02-04 12:20:30,973 | INFO     | .. there are 3 such processes running
[2026-02-04 13:21:02] 2026-02-04 12:20:30,974 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 13:21:02] 2026-02-04 12:20:30,974 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 13:21:02] 2026-02-04 12:20:30,974 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 13:21:02] 2026-02-04 12:20:56,262 | INFO     | [monitor] cgroup control has ended
[2026-02-04 13:21:02] 2026-02-04 12:20:57,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22768598284096)>', '<ExcThread(monitor, started 22767881664256)>']
[2026-02-04 13:21:02] 2026-02-04 12:20:58,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 13:21:02] 2026-02-04 12:20:58,076 | INFO     | [monitor] control thread has ended
[2026-02-04 13:21:02] 2026-02-04 12:21:02,418 | INFO     | all workflow threads have been joined
[2026-02-04 13:21:02] 2026-02-04 12:21:02,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 13:21:02] 2026-02-04 12:21:02,418 | INFO     | traces error code: 0
[2026-02-04 13:21:02] 2026-02-04 12:21:02,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 13:21:02] 2026-02-04 12:21:02,555 [wrapper] ==== pilot stdout END ====
[2026-02-04 13:21:02] 2026-02-04 12:21:02,558 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 13:21:02] 2026-02-04 12:21:02,563 [wrapper] pilotpid: 1064506
[2026-02-04 13:21:02] 2026-02-04 12:21:02,567 [wrapper] Pilot exit status: 0
[2026-02-04 13:21:02] 2026-02-04 12:21:02,584 [wrapper] pandaids: 6994435137
[2026-02-04 13:21:02] 2026-02-04 12:21:02,741 [wrapper] cleanup supervisor_pilot 1229625 1064508
[2026-02-04 13:21:02] 2026-02-04 12:21:02,745 [wrapper] Test setup, not cleaning
[2026-02-04 13:21:02] 2026-02-04 12:21:02,749 [wrapper] apfmon messages muted
[2026-02-04 13:21:02] 2026-02-04 12:21:02,753 [wrapper] ==== wrapper stdout END ====
[2026-02-04 13:21:02] 2026-02-04 12:21:02,757 [wrapper] ==== wrapper stderr END ====
[2026-02-04 13:21:02]  *** Error codes and diagnostics ***
[2026-02-04 13:21:02]     "exeErrorCode": 0,
[2026-02-04 13:21:02]     "exeErrorDiag": "",
[2026-02-04 13:21:02]     "pilotErrorCode": 0,
[2026-02-04 13:21:02]     "pilotErrorDiag": "",
[2026-02-04 13:21:02]  *** Listing of results directory ***
[2026-02-04 13:21:02] total 678796
[2026-02-04 13:21:02] -rwx------ 1 boinc boinc     36322 Feb  3 21:02 runpilot2-wrapper.sh
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc      5111 Feb  3 21:04 queuedata.json
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc    584422 Feb  3 21:04 pilot3.tar.gz
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc       100 Feb  4 10:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 13:21:02] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 10:23 run_atlas
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc       105 Feb  4 10:23 job.xml
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc      6689 Feb  4 10:23 init_data.xml
[2026-02-04 13:21:02] -rw-r--r-- 2 boinc boinc 500898101 Feb  4 10:23 EVNT.48318040._000167.pool.root.1
[2026-02-04 13:21:02] -rw-r--r-- 2 boinc boinc    597763 Feb  4 10:23 input.tar.gz
[2026-02-04 13:21:02] -rw-r--r-- 2 boinc boinc     15845 Feb  4 10:23 start_atlas.sh
[2026-02-04 13:21:02] drwxrwx--x 2 boinc boinc      4096 Feb  4 10:23 shared
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc         0 Feb  4 10:23 boinc_lockfile
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc      2536 Feb  4 10:23 pandaJob.out
[2026-02-04 13:21:02] -rw------- 1 boinc boinc   1009236 Feb  4 10:23 agis_schedconf.cvmfs.json
[2026-02-04 13:21:02] -rw------- 1 boinc boinc   1511668 Feb  4 10:23 agis_ddmendpoints.agis.ALL.json
[2026-02-04 13:21:02] -rw------- 1 boinc boinc       442 Feb  4 10:23 workernode_map.json
[2026-02-04 13:21:02] drwx------ 5 boinc boinc      4096 Feb  4 10:23 pilot3
[2026-02-04 13:21:02] -rw------- 1 boinc boinc 186572415 Feb  4 13:19 HITS.48318042._008604.pool.root.1
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc       528 Feb  4 13:19 boinc_task_state.xml
[2026-02-04 13:21:02] -rw------- 1 boinc boinc      1025 Feb  4 13:19 memory_monitor_summary.json
[2026-02-04 13:21:02] -rw------- 1 boinc boinc    371574 Feb  4 13:19 log.48318042._008604.job.log.tgz.1
[2026-02-04 13:21:02] -rw------- 1 boinc boinc      6353 Feb  4 13:19 heartbeat.json
[2026-02-04 13:21:02] -rw------- 1 boinc boinc        95 Feb  4 13:20 pilot_heartbeat.json
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc      8192 Feb  4 13:20 boinc_mmap_file
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc        26 Feb  4 13:20 wrapper_checkpoint.txt
[2026-02-04 13:21:02] -rw------- 1 boinc boinc      4831 Feb  4 13:21 pilotlog.txt
[2026-02-04 13:21:02] -rw------- 1 boinc boinc   1467552 Feb  4 13:21 log.48318042._008604.job.log.1
[2026-02-04 13:21:02] -rw------- 1 boinc boinc       357 Feb  4 13:21 output.list
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc       620 Feb  4 13:21 runtime_log
[2026-02-04 13:21:02] -rw------- 1 boinc boinc   1853440 Feb  4 13:21 result.tar.gz
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc      9205 Feb  4 13:21 runtime_log.err
[2026-02-04 13:21:02] -rw------- 1 boinc boinc       665 Feb  4 13:21 kTdMDmgmb78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDm1pVKDm1GsuHn.diag
[2026-02-04 13:21:02] -rw-r--r-- 1 boinc boinc     21201 Feb  4 13:21 stderr.txt
[2026-02-04 13:21:02] HITS file was successfully produced:
[2026-02-04 13:21:02] -rw------- 1 boinc boinc 186572415 Feb  4 13:19 shared/HITS.pool.root.1
[2026-02-04 13:21:02]  *** Contents of shared directory: ***
[2026-02-04 13:21:02] total 673780
[2026-02-04 13:21:02] -rw-r--r-- 2 boinc boinc 500898101 Feb  4 10:23 ATLAS.root_0
[2026-02-04 13:21:02] -rw-r--r-- 2 boinc boinc    597763 Feb  4 10:23 input.tar.gz
[2026-02-04 13:21:02] -rw-r--r-- 2 boinc boinc     15845 Feb  4 10:23 start_atlas.sh
[2026-02-04 13:21:02] -rw------- 1 boinc boinc 186572415 Feb  4 13:19 HITS.pool.root.1
[2026-02-04 13:21:02] -rw------- 1 boinc boinc   1853440 Feb  4 13:21 result.tar.gz
13:21:03 (1053573): run_atlas exited; CPU time 40917.502013
13:21:03 (1053573): called boinc_finish(0)

</stderr_txt>
]]>

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