Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:26:07 (3832982): wrapper (7.7.26015): starting
21:26:07 (3832982): wrapper: running run_atlas (--nthreads 9)
[2026-02-03 21:26:07] Arguments: --nthreads 9
[2026-02-03 21:26:07] Threads: 9
[2026-02-03 21:26:07] Checking for CVMFS
[2026-02-03 21:26:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 21:26:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 21:26:28] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 21:26:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 21:26:29] 2.13.3.0 8749 130244 606176 155851 2 325 15548357 21042177 33665 16776704 0 485126751 99.463 668258209 32271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-03 21:26:29] CVMFS is ok
[2026-02-03 21:26:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 21:26:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 21:26:30] Further information can be found at the LHC@home message board.
[2026-02-03 21:26:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 21:26:30] Checking for apptainer binary...
[2026-02-03 21:26:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 21:26:30] Running /usr/bin/apptainer --version
[2026-02-03 21:26:30] apptainer version 1.4.5-2.el9
[2026-02-03 21:26:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 21:26:30] c-16-10.aglt2.org
[2026-02-03 21:26:30] apptainer works
[2026-02-03 21:26:31] Set ATHENA_PROC_NUMBER=9
[2026-02-03 21:26:31] Set ATHENA_CORE_NUMBER=9
[2026-02-03 21:26:31] Starting ATLAS job with PandaID=7000017366
[2026-02-03 21:26:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
23:20:10 (3832982): BOINC client no longer exists - exiting
23:20:10 (3832982): timer handler: client dead, exiting
23:32:02 (255775): wrapper (7.7.26015): starting
23:32:02 (255775): wrapper: running run_atlas (--nthreads 9)
[2026-02-03 23:32:02] Arguments: --nthreads 9
[2026-02-03 23:32:02] Threads: 9
[2026-02-03 23:32:02] This job has been restarted, cleaning up previous attempt
[2026-02-03 23:32:02] Checking for CVMFS
[2026-02-03 23:32:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 23:32:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 23:32:04] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 23:32:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 23:32:05] 2.13.3.0 8749 130369 599968 155855 1 165 17002069 21042176 32522 16776704 0 485875556 99.464 668663418 32271 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-02-03 23:32:05] CVMFS is ok
[2026-02-03 23:32:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 23:32:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 23:32:05] Further information can be found at the LHC@home message board.
[2026-02-03 23:32:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 23:32:05] Checking for apptainer binary...
[2026-02-03 23:32:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 23:32:05] Running /usr/bin/apptainer --version
[2026-02-03 23:32:05] apptainer version 1.4.5-2.el9
[2026-02-03 23:32:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 23:32:06] c-16-10.aglt2.org
[2026-02-03 23:32:06] apptainer works
[2026-02-03 23:32:06] Set ATHENA_PROC_NUMBER=9
[2026-02-03 23:32:06] Set ATHENA_CORE_NUMBER=9
[2026-02-03 23:32:07] Starting ATLAS job with PandaID=7000017366
[2026-02-03 23:32:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 10:57:32]  *** The last 200 lines of the pilot log: ***
[2026-02-04 10:57:32] 2026-02-04 15:56:41,538 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,538 | INFO     | log transfer has been attempted: DONE
[2026-02-04 10:57:32] 2026-02-04 15:56:41,538 | INFO     | job 7000017366 has finished - writing final server update
[2026-02-04 10:57:32] 2026-02-04 15:56:41,539 | INFO     | total number of processed events: 400 (read)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,551 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-7000017366/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,552 | INFO     | extracted standard info from prmon json
[2026-02-04 10:57:32] 2026-02-04 15:56:41,552 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 10:57:32] 2026-02-04 15:56:41,553 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 10:57:32] 2026-02-04 15:56:41,553 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 10:57:32] 2026-02-04 15:56:41,554 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 10:57:32] 2026-02-04 15:56:41,572 | INFO     | fitting pss+swap vs Time
[2026-02-04 10:57:32] 2026-02-04 15:56:41,573 | INFO     | sum of square deviations: 93674456830.69792
[2026-02-04 10:57:32] 2026-02-04 15:56:41,587 | INFO     | sum of deviations: 258630629749.83456
[2026-02-04 10:57:32] 2026-02-04 15:56:41,587 | INFO     | mean x: 1770200098.6497765
[2026-02-04 10:57:32] 2026-02-04 15:56:41,587 | INFO     | mean y: 2556702.8971684054
[2026-02-04 10:57:32] 2026-02-04 15:56:41,587 | INFO     | intersect: -4884879870.388377
[2026-02-04 10:57:32] 2026-02-04 15:56:41,589 | INFO     | chi2: 2.7828601484176603
[2026-02-04 10:57:32] 2026-02-04 15:56:41,590 | INFO     | sum of square deviations: 91595933038.37837
[2026-02-04 10:57:32] 2026-02-04 15:56:41,603 | INFO     | sum of deviations: 255422358265.6938
[2026-02-04 10:57:32] 2026-02-04 15:56:41,603 | INFO     | mean x: 1770199946.1531532
[2026-02-04 10:57:32] 2026-02-04 15:56:41,603 | INFO     | mean y: 2556467.3363363366
[2026-02-04 10:57:32] 2026-02-04 15:56:41,603 | INFO     | intersect: -4933783278.870451
[2026-02-04 10:57:32] 2026-02-04 15:56:41,604 | INFO     | chi2: 2.7831250562302827
[2026-02-04 10:57:32] 2026-02-04 15:56:41,605 | INFO     | current chi2=2.7831250562302827 (change=-0.009519264299827546 %)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,605 | INFO     | right removable region: 665
[2026-02-04 10:57:32] 2026-02-04 15:56:41,606 | INFO     | sum of square deviations: 91595748940.37839
[2026-02-04 10:57:32] 2026-02-04 15:56:41,619 | INFO     | sum of deviations: 85124105855.21626
[2026-02-04 10:57:32] 2026-02-04 15:56:41,619 | INFO     | mean x: 1770200251.1531532
[2026-02-04 10:57:32] 2026-02-04 15:56:41,619 | INFO     | mean y: 2569411.635135135
[2026-02-04 10:57:32] 2026-02-04 15:56:41,619 | INFO     | intersect: -1642558395.1386988
[2026-02-04 10:57:32] 2026-02-04 15:56:41,620 | INFO     | chi2: 0.21751292421168672
[2026-02-04 10:57:32] 2026-02-04 15:56:41,621 | INFO     | current chi2=0.21751292421168672 (change=92.18383560038527 %)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,622 | INFO     | sum of square deviations: 89547977870.72906
[2026-02-04 10:57:32] 2026-02-04 15:56:41,634 | INFO     | sum of deviations: 50359045715.27386
[2026-02-04 10:57:32] 2026-02-04 15:56:41,635 | INFO     | mean x: 1770200403.6580937
[2026-02-04 10:57:32] 2026-02-04 15:56:41,635 | INFO     | mean y: 2571996.5189107414
[2026-02-04 10:57:32] 2026-02-04 15:56:41,635 | INFO     | intersect: -992934604.2186766
[2026-02-04 10:57:32] 2026-02-04 15:56:41,636 | INFO     | chi2: 0.11987552382400452
[2026-02-04 10:57:32] 2026-02-04 15:56:41,636 | INFO     | current chi2=0.11987552382400452 (change=44.888091473893326 %)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,637 | INFO     | sum of square deviations: 87530951563.54718
[2026-02-04 10:57:32] 2026-02-04 15:56:41,650 | INFO     | sum of deviations: 29977228913.606697
[2026-02-04 10:57:32] 2026-02-04 15:56:41,650 | INFO     | mean x: 1770200556.1631098
[2026-02-04 10:57:32] 2026-02-04 15:56:41,650 | INFO     | mean y: 2573537.5457317075
[2026-02-04 10:57:32] 2026-02-04 15:56:41,651 | INFO     | intersect: -603677238.2906295
[2026-02-04 10:57:32] 2026-02-04 15:56:41,652 | INFO     | chi2: 0.0908193463198778
[2026-02-04 10:57:32] 2026-02-04 15:56:41,652 | INFO     | current chi2=0.0908193463198778 (change=24.238624013677388 %)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,652 | INFO     | left removable region: 30
[2026-02-04 10:57:32] 2026-02-04 15:56:41,653 | INFO     | sum of square deviations: 79390993378.08487
[2026-02-04 10:57:32] 2026-02-04 15:56:41,665 | INFO     | sum of deviations: 67222167835.1685
[2026-02-04 10:57:32] 2026-02-04 15:56:41,665 | INFO     | mean x: 1770200830.6519685
[2026-02-04 10:57:32] 2026-02-04 15:56:41,665 | INFO     | mean y: 2570285.6251968504
[2026-02-04 10:57:32] 2026-02-04 15:56:41,665 | INFO     | intersect: -1496299199.1454678
[2026-02-04 10:57:32] 2026-02-04 15:56:41,666 | INFO     | chi2: 0.04120920968658165
[2026-02-04 10:57:32] 2026-02-04 15:56:41,667 | INFO     | current memory leak: 0.85 B/s (using 635 data points, chi2=0.04)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,668 | INFO     | could have reported an average CPU frequency of 2899 MHz (26 samples)
[2026-02-04 10:57:32] 2026-02-04 15:56:41,668 | INFO     | ..............................
[2026-02-04 10:57:32] 2026-02-04 15:56:41,668 | INFO     | . Timing measurements:
[2026-02-04 10:57:32] 2026-02-04 15:56:41,668 | INFO     | . get job = 0 s
[2026-02-04 10:57:32] 2026-02-04 15:56:41,668 | INFO     | . initial setup = 2 s
[2026-02-04 10:57:32] 2026-02-04 15:56:41,668 | INFO     | . payload setup = 29 s
[2026-02-04 10:57:32] 2026-02-04 15:56:41,669 | INFO     | . stage-in = 0 s
[2026-02-04 10:57:32] 2026-02-04 15:56:41,669 | INFO     | . payload execution = 40959 s
[2026-02-04 10:57:32] 2026-02-04 15:56:41,669 | INFO     | . stage-out = 3 s
[2026-02-04 10:57:32] 2026-02-04 15:56:41,669 | INFO     | . log creation = 0 s
[2026-02-04 10:57:32] 2026-02-04 15:56:41,669 | INFO     | ..............................
[2026-02-04 10:57:32] 2026-02-04 15:56:42,361 | INFO     | 
[2026-02-04 10:57:32] 2026-02-04 15:56:42,361 | INFO     | job summary report
[2026-02-04 10:57:32] 2026-02-04 15:56:42,361 | INFO     | --------------------------------------------------
[2026-02-04 10:57:32] 2026-02-04 15:56:42,361 | INFO     | PanDA job id: 7000017366
[2026-02-04 10:57:32] 2026-02-04 15:56:42,362 | INFO     | task id: 48317892
[2026-02-04 10:57:32] 2026-02-04 15:56:42,362 | INFO     | errors: (none)
[2026-02-04 10:57:32] 2026-02-04 15:56:42,362 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 10:57:32] 2026-02-04 15:56:42,362 | INFO     | pilot state: finished 
[2026-02-04 10:57:32] 2026-02-04 15:56:42,362 | INFO     | transexitcode: 0
[2026-02-04 10:57:32] 2026-02-04 15:56:42,362 | INFO     | exeerrorcode: 0
[2026-02-04 10:57:32] 2026-02-04 15:56:42,362 | INFO     | exeerrordiag: 
[2026-02-04 10:57:32] 2026-02-04 15:56:42,377 | INFO     | exitcode: 0
[2026-02-04 10:57:32] 2026-02-04 15:56:42,377 | INFO     | exitmsg: OK
[2026-02-04 10:57:32] 2026-02-04 15:56:42,377 | INFO     | cpuconsumptiontime: 82692 s
[2026-02-04 10:57:32] 2026-02-04 15:56:42,377 | INFO     | nevents: 400
[2026-02-04 10:57:32] 2026-02-04 15:56:42,377 | INFO     | neventsw: 0
[2026-02-04 10:57:32] 2026-02-04 15:56:42,378 | INFO     | pid: 273059
[2026-02-04 10:57:32] 2026-02-04 15:56:42,378 | INFO     | pgrp: 273059
[2026-02-04 10:57:32] 2026-02-04 15:56:42,378 | INFO     | corecount: 9
[2026-02-04 10:57:32] 2026-02-04 15:56:42,378 | INFO     | event service: False
[2026-02-04 10:57:32] 2026-02-04 15:56:42,378 | INFO     | sizes: {0: 2277135, 1: 2277820, 2: 2277848, 3: 2278309, 14: 2278309, 40993: 2320754, 40998: 2329752, 41000: 2329808, 41003: 2330002}
[2026-02-04 10:57:32] 2026-02-04 15:56:42,378 | INFO     | --------------------------------------------------
[2026-02-04 10:57:32] 2026-02-04 15:56:42,378 | INFO     | 
[2026-02-04 10:57:32] 2026-02-04 15:56:42,404 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-02-04 10:57:32] 2026-02-04 15:56:42,495 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,495 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,496 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,496 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,496 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,496 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,496 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,496 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,497 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,497 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,497 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,497 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,497 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,497 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,497 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,498 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,498 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,498 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 10:57:32] 2026-02-04 15:56:42,498 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,498 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 10:57:32] 2026-02-04 15:56:42,498 | INFO     | job 7000017366 has completed (purged errors)
[2026-02-04 10:57:32] 2026-02-04 15:56:42,536 | INFO     | overall cleanup function is called
[2026-02-04 10:57:32] 2026-02-04 15:56:43,549 | INFO     | --- collectZombieJob: --- 10, [273059]
[2026-02-04 10:57:32] 2026-02-04 15:56:43,549 | INFO     | zombie collector waiting for pid 273059
[2026-02-04 10:57:32] 2026-02-04 15:56:43,549 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 10:57:32] 2026-02-04 15:56:43,549 | INFO     | collected zombie processes
[2026-02-04 10:57:32] 2026-02-04 15:56:43,549 | INFO     | will attempt to kill all subprocesses of pid=273059
[2026-02-04 10:57:32] 2026-02-04 15:56:45,301 | INFO     | process IDs to be killed: [273059] (in reverse order)
[2026-02-04 10:57:32] 2026-02-04 15:56:45,661 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 10:57:32] 2026-02-04 15:56:45,661 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 10:57:32] 2026-02-04 15:56:45,706 | INFO     | did not find any defunct processes belonging to 273059
[2026-02-04 10:57:32] 2026-02-04 15:56:45,734 | INFO     | did not find any defunct processes belonging to 273059
[2026-02-04 10:57:32] 2026-02-04 15:56:45,735 | INFO     | ready for new job
[2026-02-04 10:57:32] 2026-02-04 15:56:45,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 10:57:32] 2026-02-04 15:56:45,739 | INFO     | **************************************
[2026-02-04 10:57:32] 2026-02-04 15:56:45,741 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 10:57:32] 2026-02-04 15:56:45,741 | INFO     | **************************************
[2026-02-04 10:57:32] 2026-02-04 15:56:45,741 | INFO     | 
[2026-02-04 10:57:32] 2026-02-04 15:56:45,743 | INFO     | architecture information:
[2026-02-04 10:57:32] 2026-02-04 15:56:45,744 | INFO     | executing command: cat /etc/os-release
[2026-02-04 10:57:32] 2026-02-04 15:56:45,762 | INFO     | cat /etc/os-release:
[2026-02-04 10:57:32] NAME="CentOS Linux"
[2026-02-04 10:57:32] VERSION="7 (Core)"
[2026-02-04 10:57:32] ID="centos"
[2026-02-04 10:57:32] ID_LIKE="rhel fedora"
[2026-02-04 10:57:32] VERSION_ID="7"
[2026-02-04 10:57:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 10:57:32] ANSI_COLOR="0;31"
[2026-02-04 10:57:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 10:57:32] HOME_URL="https://www.centos.org/"
[2026-02-04 10:57:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 10:57:32] 
[2026-02-04 10:57:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 10:57:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 10:57:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 10:57:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 10:57:32] 
[2026-02-04 10:57:32] 2026-02-04 15:56:45,762 | INFO     | **************************************
[2026-02-04 10:57:32] 2026-02-04 15:56:46,266 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-02-04 10:57:32] 2026-02-04 15:56:46,288 | INFO     | sufficient remaining disk space (52084867072 B)
[2026-02-04 10:57:32] 2026-02-04 15:56:46,288 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 10:57:32] 2026-02-04 15:56:46,289 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 10:57:32] 2026-02-04 15:56:46,289 | INFO     | update_server=False
[2026-02-04 10:57:32] 2026-02-04 15:56:46,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 10:57:32] 2026-02-04 15:56:46,289 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 10:57:32] 2026-02-04 15:56:46,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 10:57:32] 2026-02-04 15:56:46,290 | INFO     | aborting loop
[2026-02-04 10:57:32] 2026-02-04 15:56:46,532 | INFO     | all payload control threads have been joined
[2026-02-04 10:57:32] 2026-02-04 15:56:46,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 10:57:32] 2026-02-04 15:56:47,001 | INFO     | all data control threads have been joined
[2026-02-04 10:57:32] 2026-02-04 15:56:47,297 | INFO     | [job] retrieve thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:47,316 | INFO     | [job] job monitor thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:47,327 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:47,537 | INFO     | [payload] control thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:47,640 | INFO     | all job control threads have been joined
[2026-02-04 10:57:32] 2026-02-04 15:56:47,707 | INFO     | [job] validate thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:47,849 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:47,901 | INFO     | [job] queue monitor thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:48,007 | INFO     | [data] control thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:48,158 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:48,297 | INFO     | [data] copytool_out thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:48,412 | INFO     | [payload] validate_post thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:48,453 | INFO     | [data] copytool_in thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:48,454 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:48,645 | INFO     | [job] control thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:48,731 | INFO     | [payload] failed_post thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:56:49,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 10:57:32] 2026-02-04 15:56:53,685 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 10:57:32] 2026-02-04 15:57:15,190 | INFO     | PID=264296 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 10:57:32] 2026-02-04 15:57:15,190 | INFO     | .. there are 33 such processes running
[2026-02-04 10:57:32] 2026-02-04 15:57:15,191 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 10:57:32] 2026-02-04 15:57:15,191 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 10:57:32] 2026-02-04 15:57:15,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 10:57:32] 2026-02-04 15:57:26,868 | INFO     | [monitor] cgroup control has ended
[2026-02-04 10:57:32] 2026-02-04 15:57:27,018 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140613280646976)>', '<ExcThread(monitor, started 140612640687872)>']
[2026-02-04 10:57:32] 2026-02-04 15:57:27,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 10:57:32] 2026-02-04 15:57:27,323 | INFO     | [monitor] control thread has ended
[2026-02-04 10:57:32] 2026-02-04 15:57:32,046 | INFO     | all workflow threads have been joined
[2026-02-04 10:57:32] 2026-02-04 15:57:32,046 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 10:57:32] 2026-02-04 15:57:32,046 | INFO     | traces error code: 0
[2026-02-04 10:57:32] 2026-02-04 15:57:32,047 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 10:57:32] 2026-02-04 15:57:32,273 [wrapper] ==== pilot stdout END ====
[2026-02-04 10:57:32] 2026-02-04 15:57:32,288 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 10:57:32] 2026-02-04 15:57:32,319 [wrapper] pilotpid: 264296
[2026-02-04 10:57:32] 2026-02-04 15:57:32,340 [wrapper] Pilot exit status: 0
[2026-02-04 10:57:32] 2026-02-04 15:57:32,361 [wrapper] pandaids: 7000017366 7000017366
[2026-02-04 10:57:32] 2026-02-04 15:57:32,472 [wrapper] cleanup supervisor_pilot 3918724 264297
[2026-02-04 10:57:32] 2026-02-04 15:57:32,476 [wrapper] Test setup, not cleaning
[2026-02-04 10:57:32] 2026-02-04 15:57:32,479 [wrapper] apfmon messages muted
[2026-02-04 10:57:32] 2026-02-04 15:57:32,483 [wrapper] ==== wrapper stdout END ====
[2026-02-04 10:57:32] 2026-02-04 15:57:32,486 [wrapper] ==== wrapper stderr END ====
[2026-02-04 10:57:32]  *** Error codes and diagnostics ***
[2026-02-04 10:57:32]     "exeErrorCode": 0,
[2026-02-04 10:57:32]     "exeErrorDiag": "",
[2026-02-04 10:57:32]     "pilotErrorCode": 0,
[2026-02-04 10:57:32]     "pilotErrorDiag": "",
[2026-02-04 10:57:32]  *** Listing of results directory ***
[2026-02-04 10:57:32] total 1167576
[2026-02-04 10:57:32] drwx------. 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-02-04 10:57:32] -rwx------. 1 boincer umatlas     36322 Feb  3 15:01 runpilot2-wrapper.sh
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas      5111 Feb  3 15:04 queuedata.json
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas    584422 Feb  3 15:04 pilot3.tar.gz
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas       100 Feb  3 21:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 10:57:32] -rwxr-xr-x. 1 boincer umatlas      7986 Feb  3 21:26 run_atlas
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas       105 Feb  3 21:26 job.xml
[2026-02-04 10:57:32] -rw-r--r--. 3 boincer umatlas 496975399 Feb  3 21:26 EVNT.48317889._000243.pool.root.1
[2026-02-04 10:57:32] -rw-r--r--. 3 boincer umatlas 496975399 Feb  3 21:26 ATLAS.root_0
[2026-02-04 10:57:32] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 21:26 start_atlas.sh
[2026-02-04 10:57:32] drwxrwx--x. 2 boincer umatlas      4096 Feb  3 21:26 shared
[2026-02-04 10:57:32] -rw-r--r--. 2 boincer umatlas    597761 Feb  3 21:26 input.tar.gz
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas         0 Feb  3 21:26 boinc_lockfile
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas      2523 Feb  3 23:32 pandaJob.out
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas        57 Feb  3 23:32 setup.sh.local
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas   1009236 Feb  3 23:33 agis_schedconf.cvmfs.json
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas       441 Feb  3 23:33 workernode_map.json
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas      6524 Feb  4 10:47 init_data.xml
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas 187088443 Feb  4 10:55 HITS.48317892._012764.pool.root.1
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas       533 Feb  4 10:55 boinc_task_state.xml
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas      1043 Feb  4 10:56 memory_monitor_summary.json
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas        96 Feb  4 10:56 pilot_heartbeat.json
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas   1511668 Feb  4 10:56 agis_ddmendpoints.agis.ALL.json
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas    799232 Feb  4 10:56 log.48317892._012764.job.log.tgz.1
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas      6387 Feb  4 10:56 heartbeat.json
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas      8192 Feb  4 10:57 boinc_mmap_file
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas        29 Feb  4 10:57 wrapper_checkpoint.txt
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas      4819 Feb  4 10:57 pilotlog.txt
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas   4505352 Feb  4 10:57 log.48317892._012764.job.log.1
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas       357 Feb  4 10:57 output.list
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas       620 Feb  4 10:57 runtime_log
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas   5324800 Feb  4 10:57 result.tar.gz
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas      9422 Feb  4 10:57 runtime_log.err
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas       782 Feb  4 10:57 6fHODm6lb78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmYlVKDmVcVJ8m.diag
[2026-02-04 10:57:32] -rw-r--r--. 1 boincer umatlas     23452 Feb  4 10:57 stderr.txt
[2026-02-04 10:57:32] HITS file was successfully produced:
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas 187088443 Feb  4 10:55 shared/HITS.pool.root.1
[2026-02-04 10:57:32]  *** Contents of shared directory: ***
[2026-02-04 10:57:32] total 673840
[2026-02-04 10:57:32] -rw-r--r--. 3 boincer umatlas 496975399 Feb  3 21:26 ATLAS.root_0
[2026-02-04 10:57:32] -rw-r--r--. 2 boincer umatlas     15845 Feb  3 21:26 start_atlas.sh
[2026-02-04 10:57:32] -rw-r--r--. 2 boincer umatlas    597761 Feb  3 21:26 input.tar.gz
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas 187088443 Feb  4 10:55 HITS.pool.root.1
[2026-02-04 10:57:32] -rw-------. 1 boincer umatlas   5324800 Feb  4 10:57 result.tar.gz
10:57:34 (255775): run_atlas exited; CPU time 85009.440388
10:57:34 (255775): called boinc_finish(0)

</stderr_txt>
]]>

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