Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:16:33 (1982274): wrapper (7.7.26015): starting
20:16:33 (1982274): wrapper: running run_atlas (--nthreads 4)
[2026-02-04 20:16:33] Arguments: --nthreads 4
[2026-02-04 20:16:33] Threads: 4
[2026-02-04 20:16:33] Checking for CVMFS
[2026-02-04 20:16:33] No cvmfs_config command found, will try listing directly
[2026-02-04 20:16:33] CVMFS is ok
[2026-02-04 20:16:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 20:16:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 20:16:33] Further information can be found at the LHC@home message board.
[2026-02-04 20:16:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 20:16:33] Checking for apptainer binary...
[2026-02-04 20:16:33] which: no apptainer in ((null))
[2026-02-04 20:16:33] apptainer is not installed, using version from CVMFS
[2026-02-04 20:16:33] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 20:16:33] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot92/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2026-02-04 20:16:33] apptainer works
[2026-02-04 20:16:33] Set ATHENA_PROC_NUMBER=4
[2026-02-04 20:16:33] Set ATHENA_CORE_NUMBER=4
[2026-02-04 20:16:33] Starting ATLAS job with PandaID=7000511841
[2026-02-04 20:16:33] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot92/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 23:31:54]  *** The last 200 lines of the pilot log: ***
[2026-02-04 23:31:54] 2026-02-04 22:07:25,080 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 23:31:54] 2026-02-04 22:07:25,080 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 23:31:54] 2026-02-04 22:07:25,081 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 23:31:54] 2026-02-04 22:07:25,081 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 23:31:54] 2026-02-04 22:07:25,084 | INFO     | fitting pss+swap vs Time
[2026-02-04 23:31:54] 2026-02-04 22:07:25,084 | INFO     | sum of square deviations: 1470248962.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,085 | INFO     | sum of deviations: -6836730336.5
[2026-02-04 23:31:54] 2026-02-04 22:07:25,085 | INFO     | mean x: 1770237738.5
[2026-02-04 23:31:54] 2026-02-04 22:07:25,085 | INFO     | mean y: 2328683.625
[2026-02-04 23:31:54] 2026-02-04 22:07:25,086 | INFO     | intersect: 8234021657.008718
[2026-02-04 23:31:54] 2026-02-04 22:07:25,086 | INFO     | chi2: 2.123575401062643
[2026-02-04 23:31:54] 2026-02-04 22:07:25,086 | INFO     | sum of square deviations: 1342841922.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,087 | INFO     | sum of deviations: 4034206329.999998
[2026-02-04 23:31:54] 2026-02-04 22:07:25,087 | INFO     | mean x: 1770237586.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,087 | INFO     | mean y: 2341390.90797546
[2026-02-04 23:31:54] 2026-02-04 22:07:25,087 | INFO     | intersect: -5315859923.814693
[2026-02-04 23:31:54] 2026-02-04 22:07:25,088 | INFO     | chi2: 1.317388474965339
[2026-02-04 23:31:54] 2026-02-04 22:07:25,088 | INFO     | current chi2=1.317388474965339 (change=37.96365910501156 %)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,088 | INFO     | sum of square deviations: 1223016419.5
[2026-02-04 23:31:54] 2026-02-04 22:07:25,089 | INFO     | sum of deviations: 4156989936.000001
[2026-02-04 23:31:54] 2026-02-04 22:07:25,089 | INFO     | mean x: 1770237433.5
[2026-02-04 23:31:54] 2026-02-04 22:07:25,089 | INFO     | mean y: 2341547.240506329
[2026-02-04 23:31:54] 2026-02-04 22:07:25,089 | INFO     | intersect: -6014633432.047555
[2026-02-04 23:31:54] 2026-02-04 22:07:25,089 | INFO     | chi2: 1.3183563595181378
[2026-02-04 23:31:54] 2026-02-04 22:07:25,089 | INFO     | current chi2=1.3183563595181378 (change=-0.07346994232845334 %)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,090 | INFO     | right removable region: 157
[2026-02-04 23:31:54] 2026-02-04 22:07:25,090 | INFO     | sum of square deviations: 1342841922.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,091 | INFO     | sum of deviations: -26812503091.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,091 | INFO     | mean x: 1770237891.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,091 | INFO     | mean y: 2352197.944785276
[2026-02-04 23:31:54] 2026-02-04 22:07:25,091 | INFO     | intersect: 35348663738.137245
[2026-02-04 23:31:54] 2026-02-04 22:07:25,091 | INFO     | chi2: 0.853815217566603
[2026-02-04 23:31:54] 2026-02-04 22:07:25,091 | INFO     | current chi2=0.853815217566603 (change=59.793505936292554 %)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,092 | INFO     | sum of square deviations: 1223016419.5
[2026-02-04 23:31:54] 2026-02-04 22:07:25,092 | INFO     | sum of deviations: -25087525357.5
[2026-02-04 23:31:54] 2026-02-04 22:07:25,092 | INFO     | mean x: 1770238043.5
[2026-02-04 23:31:54] 2026-02-04 22:07:25,093 | INFO     | mean y: 2349993.930379747
[2026-02-04 23:31:54] 2026-02-04 22:07:25,093 | INFO     | intersect: 36314938359.075745
[2026-02-04 23:31:54] 2026-02-04 22:07:25,093 | INFO     | chi2: 0.854162284750003
[2026-02-04 23:31:54] 2026-02-04 22:07:25,093 | INFO     | current chi2=0.854162284750003 (change=-0.04064898074658387 %)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,093 | INFO     | left removable region: 20
[2026-02-04 23:31:54] 2026-02-04 22:07:25,093 | INFO     | sum of square deviations: 797291228.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,094 | INFO     | sum of deviations: -10798515545.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,094 | INFO     | mean x: 1770238013.0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,094 | INFO     | mean y: 2360899.6277372264
[2026-02-04 23:31:54] 2026-02-04 22:07:25,094 | INFO     | intersect: 23978471548.28323
[2026-02-04 23:31:54] 2026-02-04 22:07:25,095 | INFO     | chi2: 0.02071165581058273
[2026-02-04 23:31:54] 2026-02-04 22:07:25,095 | INFO     | current memory leak: -13.54 B/s (using 137 data points, chi2=0.02)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,095 | INFO     | could have reported an average CPU frequency of 2738 MHz (9 samples)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,095 | INFO     | ..............................
[2026-02-04 23:31:54] 2026-02-04 22:07:25,095 | INFO     | . Timing measurements:
[2026-02-04 23:31:54] 2026-02-04 22:07:25,095 | INFO     | . get job = 0 s
[2026-02-04 23:31:54] 2026-02-04 22:07:25,096 | INFO     | . initial setup = 8 s
[2026-02-04 23:31:54] 2026-02-04 22:07:25,096 | INFO     | . payload setup = 9 s
[2026-02-04 23:31:54] 2026-02-04 22:07:25,096 | INFO     | . stage-in = 0 s
[2026-02-04 23:31:54] 2026-02-04 22:07:25,096 | INFO     | . payload execution = 10199 s
[2026-02-04 23:31:54] 2026-02-04 22:07:25,096 | INFO     | . stage-out = 0 s
[2026-02-04 23:31:54] 2026-02-04 22:07:25,096 | INFO     | . log creation = 0 s
[2026-02-04 23:31:54] 2026-02-04 22:07:25,096 | INFO     | ..............................
[2026-02-04 23:31:54] 2026-02-04 22:07:25,188 | INFO     | 
[2026-02-04 23:31:54] 2026-02-04 22:07:25,188 | INFO     | job summary report
[2026-02-04 23:31:54] 2026-02-04 22:07:25,188 | INFO     | --------------------------------------------------
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | PanDA job id: 7000511841
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | task id: 48317952
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | errors: (none)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | pilot state: finished 
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | transexitcode: 0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | exeerrorcode: 0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | exeerrordiag: 
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | exitcode: 0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | exitmsg: OK
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | cpuconsumptiontime: 39034 s
[2026-02-04 23:31:54] 2026-02-04 22:07:25,189 | INFO     | nevents: 400
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | neventsw: 0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | pid: 2009503
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | pgrp: 2009503
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | corecount: 4
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | event service: False
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | sizes: {0: 2277911, 1: 2278315, 11: 2278315, 10213: 2307501, 10214: 2316521, 10217: 2316963}
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | --------------------------------------------------
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | 
[2026-02-04 23:31:54] 2026-02-04 22:07:25,190 | INFO     | executing command: ls -lF /scratch/boinc/var/slot92/slots/0
[2026-02-04 23:31:54] 2026-02-04 22:07:25,224 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,224 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,224 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,224 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,225 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,226 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,226 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,226 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,226 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,226 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,226 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 23:31:54] 2026-02-04 22:07:25,226 | INFO     | job 7000511841 has completed (purged errors)
[2026-02-04 23:31:54] 2026-02-04 22:07:25,226 | INFO     | overall cleanup function is called
[2026-02-04 23:31:54] 2026-02-04 22:07:26,236 | INFO     | --- collectZombieJob: --- 10, [2009503]
[2026-02-04 23:31:54] 2026-02-04 22:07:26,236 | INFO     | zombie collector waiting for pid 2009503
[2026-02-04 23:31:54] 2026-02-04 22:07:26,237 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 23:31:54] 2026-02-04 22:07:26,237 | INFO     | collected zombie processes
[2026-02-04 23:31:54] 2026-02-04 22:07:26,237 | INFO     | will attempt to kill all subprocesses of pid=2009503
[2026-02-04 23:31:54] 2026-02-04 22:07:28,107 | INFO     | process IDs to be killed: [2009503] (in reverse order)
[2026-02-04 23:31:54] 2026-02-04 22:07:28,178 | WARNING  | process 2009503 can no longer be monitored (due to stat problems) - aborting
[2026-02-04 23:31:54] 2026-02-04 22:07:28,363 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 23:31:54] 2026-02-04 22:07:28,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 23:31:54] 2026-02-04 22:07:28,452 | INFO     | did not find any defunct processes belonging to 2009503
[2026-02-04 23:31:54] 2026-02-04 22:07:28,539 | INFO     | did not find any defunct processes belonging to 2009503
[2026-02-04 23:31:54] 2026-02-04 22:07:28,540 | INFO     | ready for new job
[2026-02-04 23:31:54] 2026-02-04 22:07:28,540 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 23:31:54] 2026-02-04 22:07:28,542 | INFO     | **************************************
[2026-02-04 23:31:54] 2026-02-04 22:07:28,543 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 23:31:54] 2026-02-04 22:07:28,543 | INFO     | **************************************
[2026-02-04 23:31:54] 2026-02-04 22:07:28,543 | INFO     | 
[2026-02-04 23:31:54] 2026-02-04 22:07:28,554 | INFO     | architecture information:
[2026-02-04 23:31:54] 2026-02-04 22:07:28,555 | INFO     | executing command: cat /etc/os-release
[2026-02-04 23:31:54] 2026-02-04 22:07:28,581 | INFO     | cat /etc/os-release:
[2026-02-04 23:31:54] NAME="CentOS Linux"
[2026-02-04 23:31:54] VERSION="7 (Core)"
[2026-02-04 23:31:54] ID="centos"
[2026-02-04 23:31:54] ID_LIKE="rhel fedora"
[2026-02-04 23:31:54] VERSION_ID="7"
[2026-02-04 23:31:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 23:31:54] ANSI_COLOR="0;31"
[2026-02-04 23:31:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 23:31:54] HOME_URL="https://www.centos.org/"
[2026-02-04 23:31:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 23:31:54] 
[2026-02-04 23:31:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 23:31:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 23:31:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 23:31:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 23:31:54] 
[2026-02-04 23:31:54] 2026-02-04 22:07:28,581 | INFO     | **************************************
[2026-02-04 23:31:54] 2026-02-04 22:07:28,888 | INFO     | using path: /scratch/boinc/var/slot92/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 23:31:54] 2026-02-04 22:07:29,085 | INFO     | executing command: df -mP /scratch/boinc/var/slot92/slots/0
[2026-02-04 23:31:54] 2026-02-04 22:07:29,114 | INFO     | sufficient remaining disk space (3255544315904 B)
[2026-02-04 23:31:54] 2026-02-04 22:07:29,114 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 23:31:54] 2026-02-04 22:07:29,115 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 23:31:54] 2026-02-04 22:07:29,115 | INFO     | update_server=False
[2026-02-04 23:31:54] 2026-02-04 22:07:29,115 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 23:31:54] 2026-02-04 22:07:29,659 | INFO     | number of running child processes to parent process 2009503: 1
[2026-02-04 23:31:54] 2026-02-04 22:07:29,659 | INFO     | maximum number of monitored processes: 6
[2026-02-04 23:31:54] 2026-02-04 22:07:29,659 | INFO     | aborting job monitoring since job object (job id=7000511841) has expired
[2026-02-04 23:31:54] 2026-02-04 22:07:29,659 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 23:31:54] 2026-02-04 22:07:29,659 | INFO     | will abort loop
[2026-02-04 23:31:54] 2026-02-04 22:07:29,824 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 23:31:54] 2026-02-04 22:07:29,899 | INFO     | all data control threads have been joined
[2026-02-04 23:31:54] 2026-02-04 22:07:30,120 | INFO     | [job] retrieve thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:30,199 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 23:31:54] 2026-02-04 22:07:30,353 | INFO     | [job] validate thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:30,356 | INFO     | all job control threads have been joined
[2026-02-04 23:31:54] 2026-02-04 22:07:30,369 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:30,430 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:30,556 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:30,603 | INFO     | all payload control threads have been joined
[2026-02-04 23:31:54] 2026-02-04 22:07:30,664 | INFO     | [job] job monitor thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:30,905 | INFO     | [data] control thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:30,972 | INFO     | [payload] failed_post thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:31,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 23:31:54] 2026-02-04 22:07:31,060 | INFO     | [payload] validate_post thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:31,100 | INFO     | [data] copytool_in thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:31,201 | INFO     | [job] queue monitor thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:31,362 | INFO     | [job] control thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:31,609 | INFO     | [payload] control thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:31,829 | INFO     | [data] copytool_out thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:35,065 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:39,665 | INFO     | job.realtimelogging is not enabled
[2026-02-04 23:31:54] 2026-02-04 22:07:40,670 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 23:31:54] 2026-02-04 22:07:57,392 | INFO     | PID=1994541 has CPU usage=16.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-02-04 23:31:54] 2026-02-04 22:07:57,392 | INFO     | .. there are 12 such processes running
[2026-02-04 23:31:54] 2026-02-04 22:07:57,393 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 23:31:54] 2026-02-04 22:07:57,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 23:31:54] 2026-02-04 22:07:57,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 23:31:54] 2026-02-04 22:08:12,834 | INFO     | [monitor] cgroup control has ended
[2026-02-04 23:31:54] 2026-02-04 22:08:14,588 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23320890042176)>', '<ExcThread(monitor, started 23320652429056)>']
[2026-02-04 23:31:54] 2026-02-04 22:08:15,479 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 23:31:54] 2026-02-04 22:08:15,479 | INFO     | [monitor] control thread has ended
[2026-02-04 23:31:54] 2026-02-04 22:08:19,613 | INFO     | all workflow threads have been joined
[2026-02-04 23:31:54] 2026-02-04 22:08:19,613 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 23:31:54] 2026-02-04 22:08:19,613 | INFO     | traces error code: 0
[2026-02-04 23:31:54] 2026-02-04 22:08:19,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 23:31:54] 2026-02-04 22:08:19,756 [wrapper] ==== pilot stdout END ====
[2026-02-04 23:31:54] 2026-02-04 22:08:19,760 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 23:31:54] 2026-02-04 22:08:19,764 [wrapper] pilotpid: 1994541
[2026-02-04 23:31:54] 2026-02-04 22:08:19,767 [wrapper] Pilot exit status: 0
[2026-02-04 23:31:54] 2026-02-04 22:08:19,782 [wrapper] pandaids: 7000511841
[2026-02-04 23:31:54] 2026-02-04 22:08:19,948 [wrapper] cleanup supervisor_pilot 2221042 1994542
[2026-02-04 23:31:54] 2026-02-04 22:08:19,952 [wrapper] Test setup, not cleaning
[2026-02-04 23:31:54] 2026-02-04 22:08:19,956 [wrapper] apfmon messages muted
[2026-02-04 23:31:54] 2026-02-04 22:08:19,959 [wrapper] ==== wrapper stdout END ====
[2026-02-04 23:31:54] 2026-02-04 22:08:19,962 [wrapper] ==== wrapper stderr END ====
[2026-02-04 23:31:54]  *** Error codes and diagnostics ***
[2026-02-04 23:31:54]     "exeErrorCode": 0,
[2026-02-04 23:31:54]     "exeErrorDiag": "",
[2026-02-04 23:31:54]     "pilotErrorCode": 0,
[2026-02-04 23:31:54]     "pilotErrorDiag": "",
[2026-02-04 23:31:54]  *** Listing of results directory ***
[2026-02-04 23:31:54] total 681744
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc    584422 Feb  4 00:41 pilot3.tar.gz
[2026-02-04 23:31:54] -rwx------ 1 boinc boinc     36322 Feb  4 00:45 runpilot2-wrapper.sh
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc      5111 Feb  4 00:47 queuedata.json
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc       100 Feb  4 20:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 23:31:54] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 20:16 run_atlas
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc       105 Feb  4 20:16 job.xml
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc      6689 Feb  4 20:16 init_data.xml
[2026-02-04 23:31:54] -rw-r--r-- 2 boinc boinc 505642778 Feb  4 20:16 EVNT.48317949._000213.pool.root.1
[2026-02-04 23:31:54] -rw-r--r-- 2 boinc boinc     15845 Feb  4 20:16 start_atlas.sh
[2026-02-04 23:31:54] drwxrwx--x 2 boinc boinc      4096 Feb  4 20:16 shared
[2026-02-04 23:31:54] -rw-r--r-- 2 boinc boinc    597761 Feb  4 20:16 input.tar.gz
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc         0 Feb  4 20:16 boinc_lockfile
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc      2524 Feb  4 20:16 pandaJob.out
[2026-02-04 23:31:54] -rw------- 1 boinc boinc   1009544 Feb  4 20:16 agis_schedconf.cvmfs.json
[2026-02-04 23:31:54] -rw------- 1 boinc boinc   1511668 Feb  4 20:16 agis_ddmendpoints.agis.ALL.json
[2026-02-04 23:31:54] -rw------- 1 boinc boinc       442 Feb  4 20:16 workernode_map.json
[2026-02-04 23:31:54] drwx------ 5 boinc boinc      4096 Feb  4 20:16 pilot3
[2026-02-04 23:31:54] -rw------- 1 boinc boinc 184910512 Feb  4 23:06 HITS.48317952._011345.pool.root.1
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc       529 Feb  4 23:07 boinc_task_state.xml
[2026-02-04 23:31:54] -rw------- 1 boinc boinc      1029 Feb  4 23:07 memory_monitor_summary.json
[2026-02-04 23:31:54] -rw------- 1 boinc boinc    376516 Feb  4 23:07 log.48317952._011345.job.log.tgz.1
[2026-02-04 23:31:54] -rw------- 1 boinc boinc      6359 Feb  4 23:07 heartbeat.json
[2026-02-04 23:31:54] -rw------- 1 boinc boinc        95 Feb  4 23:07 pilot_heartbeat.json
[2026-02-04 23:31:54] -rw------- 1 boinc boinc      5322 Feb  4 23:08 pilotlog.txt
[2026-02-04 23:31:54] -rw------- 1 boinc boinc   1430345 Feb  4 23:08 log.48317952._011345.job.log.1
[2026-02-04 23:31:54] -rw------- 1 boinc boinc       357 Feb  4 23:08 output.list
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc       620 Feb  4 23:08 runtime_log
[2026-02-04 23:31:54] -rw------- 1 boinc boinc   1822720 Feb  4 23:08 result.tar.gz
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc      9205 Feb  4 23:08 runtime_log.err
[2026-02-04 23:31:54] -rw------- 1 boinc boinc       665 Feb  4 23:08 F2ZNDm2Ff78n9Rq4apOajLDm4fhM0noT9bVooX4SDmkrVKDmLvcBLm.diag
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc        26 Feb  4 23:31 wrapper_checkpoint.txt
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc      8192 Feb  4 23:31 boinc_mmap_file
[2026-02-04 23:31:54] -rw-r--r-- 1 boinc boinc     20829 Feb  4 23:31 stderr.txt
[2026-02-04 23:31:54] HITS file was successfully produced:
[2026-02-04 23:31:54] -rw------- 1 boinc boinc 184910512 Feb  4 23:06 shared/HITS.pool.root.1
[2026-02-04 23:31:54]  *** Contents of shared directory: ***
[2026-02-04 23:31:54] total 676760
[2026-02-04 23:31:54] -rw-r--r-- 2 boinc boinc 505642778 Feb  4 20:16 ATLAS.root_0
[2026-02-04 23:31:54] -rw-r--r-- 2 boinc boinc     15845 Feb  4 20:16 start_atlas.sh
[2026-02-04 23:31:54] -rw-r--r-- 2 boinc boinc    597761 Feb  4 20:16 input.tar.gz
[2026-02-04 23:31:54] -rw------- 1 boinc boinc 184910512 Feb  4 23:06 HITS.pool.root.1
[2026-02-04 23:31:54] -rw------- 1 boinc boinc   1822720 Feb  4 23:08 result.tar.gz
23:31:55 (1982274): run_atlas exited; CPU time 39683.620820
23:31:55 (1982274): called boinc_finish(0)

</stderr_txt>
]]>

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