Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:59:24 (350294): wrapper (7.7.26015): starting
00:59:24 (350294): wrapper: running run_atlas (--nthreads 3)
[2026-02-04 00:59:24] Arguments: --nthreads 3
[2026-02-04 00:59:24] Threads: 3
[2026-02-04 00:59:24] Checking for CVMFS
[2026-02-04 00:59:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 00:59:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 00:59:26] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 00:59:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 00:59:26] 2.13.3.0 335550 108 48908 155848 0 50 6655121 8388609 0 130560 0 41167 99.955 6877 1090 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-02-04 00:59:26] CVMFS is ok
[2026-02-04 00:59:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 00:59:26] Small home clusters do not require a local http proxy but it is suggested if
[2026-02-04 00:59:26] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-02-04 00:59:26] Further information can be found at the LHC@home message board.
[2026-02-04 00:59:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 00:59:26] Checking for apptainer binary...
[2026-02-04 00:59:26] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 00:59:26] Running /usr/bin/apptainer --version
[2026-02-04 00:59:26] apptainer version 1.4.3
[2026-02-04 00:59:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 00:59:26] debian-e15
[2026-02-04 00:59:26] apptainer works
[2026-02-04 00:59:26] Set ATHENA_PROC_NUMBER=3
[2026-02-04 00:59:26] Set ATHENA_CORE_NUMBER=3
[2026-02-04 00:59:26] Starting ATLAS job with PandaID=6994199037
[2026-02-04 00:59:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 02:47:53]  *** The last 200 lines of the pilot log: ***
[2026-02-04 02:47:53] 2026-02-04 01:46:57,932 | INFO     | job 6994199037 has finished - writing final server update
[2026-02-04 02:47:53] 2026-02-04 01:46:57,932 | INFO     | total number of processed events: 400 (read)
[2026-02-04 02:47:53] 2026-02-04 01:46:57,934 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6994199037/memory_monitor_summary.json (trf name=prmon)
[2026-02-04 02:47:53] 2026-02-04 01:46:57,934 | INFO     | extracted standard info from prmon json
[2026-02-04 02:47:53] 2026-02-04 01:46:57,934 | INFO     | extracted standard memory fields from prmon json
[2026-02-04 02:47:53] 2026-02-04 01:46:57,934 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-04 02:47:53] 2026-02-04 01:46:57,934 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-04 02:47:53] 2026-02-04 01:46:57,934 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-04 02:47:53] 2026-02-04 01:46:57,935 | INFO     | fitting pss+swap vs Time
[2026-02-04 02:47:53] 2026-02-04 01:46:57,935 | INFO     | sum of square deviations: 369281342.5
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | sum of deviations: -15392231229.5
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | mean x: 1770166400.5
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | mean y: 2375483.5188679243
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | intersect: 73785714676.15004
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | chi2: 1.9230172916500847
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | sum of square deviations: 319447850.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | sum of deviations: -8532034803.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | mean x: 1770166248.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | mean y: 2395778.9801980196
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | intersect: 47281224029.137245
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | chi2: 1.2792869661266648
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | current chi2=1.2792869661266648 (change=33.475014931927824 %)
[2026-02-04 02:47:53] 2026-02-04 01:46:57,936 | INFO     | sum of square deviations: 274312120.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | sum of deviations: -7791409342.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | mean x: 1770166095.5
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | mean y: 2398283.2708333335
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | intersect: 50281214448.48572
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | chi2: 1.2751321471979757
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | current chi2=1.2751321471979757 (change=0.3247761478621754 %)
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | right removable region: 95
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | sum of square deviations: 319447850.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | sum of deviations: -21185224909.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | mean x: 1770166553.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | mean y: 2392105.584158416
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | intersect: 117396754132.73277
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | chi2: 0.8702938894310465
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | current chi2=0.8702938894310465 (change=54.743314414803166 %)
[2026-02-04 02:47:53] 2026-02-04 01:46:57,937 | INFO     | sum of square deviations: 274312120.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | sum of deviations: -15897073817.5
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | mean x: 1770166705.5
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | mean y: 2374213.34375
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | intersect: 102587964622.5983
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | chi2: 0.8417297299556942
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | current chi2=0.8417297299556942 (change=3.2821280055207644 %)
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | left removable region: 20
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | sum of square deviations: 130793150.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | sum of deviations: 269944458.99999994
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | mean x: 1770166675.0
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | mean y: 2353132.466666667
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | intersect: -3651100319.971047
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | chi2: 0.001317421393459373
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | current memory leak: 2.06 B/s (using 75 data points, chi2=0.00)
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | could have reported an average CPU frequency of 2098 MHz (7 samples)
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | ..............................
[2026-02-04 02:47:53] 2026-02-04 01:46:57,938 | INFO     | . Timing measurements:
[2026-02-04 02:47:53] 2026-02-04 01:46:57,939 | INFO     | . get job = 0 s
[2026-02-04 02:47:53] 2026-02-04 01:46:57,939 | INFO     | . initial setup = 4 s
[2026-02-04 02:47:53] 2026-02-04 01:46:57,939 | INFO     | . payload setup = 4 s
[2026-02-04 02:47:53] 2026-02-04 01:46:57,939 | INFO     | . stage-in = 0 s
[2026-02-04 02:47:53] 2026-02-04 01:46:57,939 | INFO     | . payload execution = 6416 s
[2026-02-04 02:47:53] 2026-02-04 01:46:57,939 | INFO     | . stage-out = 0 s
[2026-02-04 02:47:53] 2026-02-04 01:46:57,939 | INFO     | . log creation = 0 s
[2026-02-04 02:47:53] 2026-02-04 01:46:57,939 | INFO     | ..............................
[2026-02-04 02:47:53] 2026-02-04 01:46:57,973 | INFO     | time since job start (6437s) is within the limit (349056.0s)
[2026-02-04 02:47:53] 2026-02-04 01:46:58,450 | INFO     | 
[2026-02-04 02:47:53] 2026-02-04 01:46:58,450 | INFO     | job summary report
[2026-02-04 02:47:53] 2026-02-04 01:46:58,450 | INFO     | --------------------------------------------------
[2026-02-04 02:47:53] 2026-02-04 01:46:58,450 | INFO     | PanDA job id: 6994199037
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | task id: 48318042
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | errors: (none)
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | pilot state: finished 
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | transexitcode: 0
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | exeerrorcode: 0
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | exeerrordiag: 
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | exitcode: 0
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | exitmsg: OK
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | cpuconsumptiontime: 18852 s
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | nevents: 400
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | neventsw: 0
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | pid: 358910
[2026-02-04 02:47:53] 2026-02-04 01:46:58,451 | INFO     | pgrp: 358910
[2026-02-04 02:47:53] 2026-02-04 01:46:58,461 | INFO     | corecount: 3
[2026-02-04 02:47:53] 2026-02-04 01:46:58,462 | INFO     | event service: False
[2026-02-04 02:47:53] 2026-02-04 01:46:58,462 | INFO     | sizes: {0: 2278293, 10: 2278293, 6424: 2305459, 6425: 2314471, 6426: 2314527, 6427: 2314721}
[2026-02-04 02:47:53] 2026-02-04 01:46:58,462 | INFO     | --------------------------------------------------
[2026-02-04 02:47:53] 2026-02-04 01:46:58,462 | INFO     | 
[2026-02-04 02:47:53] 2026-02-04 01:46:58,462 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-02-04 02:47:53] 2026-02-04 01:46:58,476 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,476 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,476 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,476 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,476 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,476 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,476 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | job 6994199037 has completed (purged errors)
[2026-02-04 02:47:53] 2026-02-04 01:46:58,477 | INFO     | overall cleanup function is called
[2026-02-04 02:47:53] 2026-02-04 01:46:59,040 | INFO     | PID=354426 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 02:47:53] 2026-02-04 01:46:59,484 | INFO     | --- collectZombieJob: --- 10, [358910]
[2026-02-04 02:47:53] 2026-02-04 01:46:59,484 | INFO     | zombie collector waiting for pid 358910
[2026-02-04 02:47:53] 2026-02-04 01:46:59,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-04 02:47:53] 2026-02-04 01:46:59,484 | INFO     | collected zombie processes
[2026-02-04 02:47:53] 2026-02-04 01:46:59,484 | INFO     | will attempt to kill all subprocesses of pid=358910
[2026-02-04 02:47:53] 2026-02-04 01:46:59,528 | INFO     | process IDs to be killed: [358910] (in reverse order)
[2026-02-04 02:47:53] 2026-02-04 01:46:59,558 | WARNING  | found no corresponding commands to process id(s)
[2026-02-04 02:47:53] 2026-02-04 01:46:59,558 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-04 02:47:53] 2026-02-04 01:46:59,560 | INFO     | did not find any defunct processes belonging to 358910
[2026-02-04 02:47:53] 2026-02-04 01:46:59,561 | INFO     | did not find any defunct processes belonging to 358910
[2026-02-04 02:47:53] 2026-02-04 01:46:59,561 | INFO     | ready for new job
[2026-02-04 02:47:53] 2026-02-04 01:46:59,561 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-04 02:47:53] 2026-02-04 01:46:59,562 | INFO     | **************************************
[2026-02-04 02:47:53] 2026-02-04 01:46:59,562 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-04 02:47:53] 2026-02-04 01:46:59,562 | INFO     | **************************************
[2026-02-04 02:47:53] 2026-02-04 01:46:59,562 | INFO     | 
[2026-02-04 02:47:53] 2026-02-04 01:46:59,563 | INFO     | architecture information:
[2026-02-04 02:47:53] 2026-02-04 01:46:59,563 | INFO     | executing command: cat /etc/os-release
[2026-02-04 02:47:53] 2026-02-04 01:46:59,574 | INFO     | cat /etc/os-release:
[2026-02-04 02:47:53] NAME="CentOS Linux"
[2026-02-04 02:47:53] VERSION="7 (Core)"
[2026-02-04 02:47:53] ID="centos"
[2026-02-04 02:47:53] ID_LIKE="rhel fedora"
[2026-02-04 02:47:53] VERSION_ID="7"
[2026-02-04 02:47:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-04 02:47:53] ANSI_COLOR="0;31"
[2026-02-04 02:47:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-04 02:47:53] HOME_URL="https://www.centos.org/"
[2026-02-04 02:47:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-04 02:47:53] 
[2026-02-04 02:47:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-04 02:47:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-04 02:47:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-04 02:47:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-04 02:47:53] 
[2026-02-04 02:47:53] 2026-02-04 01:46:59,575 | INFO     | **************************************
[2026-02-04 02:47:53] 2026-02-04 01:47:00,078 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-02-04 02:47:53] 2026-02-04 01:47:00,089 | INFO     | sufficient remaining disk space (125899374592 B)
[2026-02-04 02:47:53] 2026-02-04 01:47:00,090 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-04 02:47:53] 2026-02-04 01:47:00,090 | INFO     | current server update state: UPDATING_FINAL
[2026-02-04 02:47:53] 2026-02-04 01:47:00,090 | INFO     | update_server=False
[2026-02-04 02:47:53] 2026-02-04 01:47:00,090 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-04 02:47:53] 2026-02-04 01:47:00,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-04 02:47:53] 2026-02-04 01:47:00,443 | INFO     | aborting loop
[2026-02-04 02:47:53] 2026-02-04 01:47:00,667 | INFO     | all data control threads have been joined
[2026-02-04 02:47:53] 2026-02-04 01:47:01,096 | INFO     | [job] retrieve thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:01,166 | INFO     | all payload control threads have been joined
[2026-02-04 02:47:53] 2026-02-04 01:47:01,166 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-04 02:47:53] 2026-02-04 01:47:01,227 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:01,374 | INFO     | all job control threads have been joined
[2026-02-04 02:47:53] 2026-02-04 01:47:01,449 | INFO     | [job] job monitor thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:01,486 | INFO     | [data] copytool_in thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:01,507 | INFO     | [payload] failed_post thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:01,673 | INFO     | [data] control thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:02,108 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:02,171 | INFO     | [payload] control thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:02,380 | INFO     | [job] control thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:02,383 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:02,444 | INFO     | [job] validate thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:02,542 | INFO     | [payload] validate_post thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:02,846 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 02:47:53] 2026-02-04 01:47:02,988 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-04 02:47:53] 2026-02-04 01:47:03,172 | INFO     | [data] copytool_out thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:03,991 | INFO     | [job] queue monitor thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:06,853 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:10,734 | INFO     | job.realtimelogging is not enabled
[2026-02-04 02:47:53] 2026-02-04 01:47:11,739 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 02:47:53] 2026-02-04 01:47:31,138 | INFO     | PID=354426 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-04 02:47:53] 2026-02-04 01:47:31,139 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 02:47:53] 2026-02-04 01:47:31,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 02:47:53] 2026-02-04 01:47:31,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 02:47:53] 2026-02-04 01:47:47,647 | INFO     | [monitor] cgroup control has ended
[2026-02-04 02:47:53] 2026-02-04 01:47:48,296 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703184586560)>', '<ExcThread(monitor, started 139701730146048)>']
[2026-02-04 02:47:53] 2026-02-04 01:47:49,211 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 02:47:53] 2026-02-04 01:47:49,212 | INFO     | [monitor] control thread has ended
[2026-02-04 02:47:53] 2026-02-04 01:47:53,322 | INFO     | all workflow threads have been joined
[2026-02-04 02:47:53] 2026-02-04 01:47:53,323 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 02:47:53] 2026-02-04 01:47:53,323 | INFO     | traces error code: 0
[2026-02-04 02:47:53] 2026-02-04 01:47:53,323 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 02:47:53] 2026-02-04 01:47:53,397 [wrapper] ==== pilot stdout END ====
[2026-02-04 02:47:53] 2026-02-04 01:47:53,399 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 02:47:53] 2026-02-04 01:47:53,401 [wrapper] pilotpid: 354426
[2026-02-04 02:47:53] 2026-02-04 01:47:53,403 [wrapper] Pilot exit status: 0
[2026-02-04 02:47:53] 2026-02-04 01:47:53,412 [wrapper] pandaids: 6994199037
[2026-02-04 02:47:53] 2026-02-04 01:47:53,435 [wrapper] cleanup supervisor_pilot  364571 354427
[2026-02-04 02:47:53] 2026-02-04 01:47:53,438 [wrapper] Test setup, not cleaning
[2026-02-04 02:47:53] 2026-02-04 01:47:53,440 [wrapper] apfmon messages muted
[2026-02-04 02:47:53] 2026-02-04 01:47:53,443 [wrapper] ==== wrapper stdout END ====
[2026-02-04 02:47:53] 2026-02-04 01:47:53,445 [wrapper] ==== wrapper stderr END ====
[2026-02-04 02:47:53]  *** Error codes and diagnostics ***
[2026-02-04 02:47:53]     "exeErrorCode": 0,
[2026-02-04 02:47:53]     "exeErrorDiag": "",
[2026-02-04 02:47:53]     "pilotErrorCode": 0,
[2026-02-04 02:47:53]     "pilotErrorDiag": "",
[2026-02-04 02:47:53]  *** Listing of results directory ***
[2026-02-04 02:47:53] total 669240
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc    584422 Feb  3 20:58 pilot3.tar.gz
[2026-02-04 02:47:53] -rwx------ 1 boinc boinc     36322 Feb  3 20:59 runpilot2-wrapper.sh
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc      5111 Feb  3 20:59 queuedata.json
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc       100 Feb  4 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 02:47:53] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 00:59 run_atlas
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc       105 Feb  4 00:59 job.xml
[2026-02-04 02:47:53] -rw-r--r-- 2 boinc boinc     15845 Feb  4 00:59 start_atlas.sh
[2026-02-04 02:47:53] drwxrwx--x 2 boinc boinc      4096 Feb  4 00:59 shared
[2026-02-04 02:47:53] -rw-r--r-- 2 boinc boinc    597764 Feb  4 00:59 input.tar.gz
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc      6671 Feb  4 00:59 init_data.xml
[2026-02-04 02:47:53] -rw-r--r-- 2 boinc boinc 495306368 Feb  4 00:59 EVNT.48318040._000164.pool.root.1
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc         0 Feb  4 00:59 boinc_setup_complete
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc         0 Feb  4 00:59 boinc_lockfile
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc      2536 Feb  4 00:59 pandaJob.out
[2026-02-04 02:47:53] -rw------- 1 boinc boinc   1009236 Feb  4 00:59 agis_schedconf.cvmfs.json
[2026-02-04 02:47:53] -rw------- 1 boinc boinc   1511668 Feb  4 00:59 agis_ddmendpoints.agis.ALL.json
[2026-02-04 02:47:53] -rw------- 1 boinc boinc       421 Feb  4 00:59 workernode_map.json
[2026-02-04 02:47:53] drwx------ 5 boinc boinc      4096 Feb  4 00:59 pilot3
[2026-02-04 02:47:53] -rw------- 1 boinc boinc 183586818 Feb  4 02:46 HITS.48318042._008451.pool.root.1
[2026-02-04 02:47:53] -rw------- 1 boinc boinc      1022 Feb  4 02:46 memory_monitor_summary.json
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc       530 Feb  4 02:46 boinc_task_state.xml
[2026-02-04 02:47:53] -rw------- 1 boinc boinc    301970 Feb  4 02:46 log.48318042._008451.job.log.tgz.1
[2026-02-04 02:47:53] -rw------- 1 boinc boinc      6308 Feb  4 02:46 heartbeat.json
[2026-02-04 02:47:53] -rw------- 1 boinc boinc        95 Feb  4 02:47 pilot_heartbeat.json
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc      8192 Feb  4 02:47 boinc_mmap_file
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc        27 Feb  4 02:47 wrapper_checkpoint.txt
[2026-02-04 02:47:53] -rw------- 1 boinc boinc      4823 Feb  4 02:47 pilotlog.txt
[2026-02-04 02:47:53] -rw------- 1 boinc boinc    931831 Feb  4 02:47 log.48318042._008451.job.log.1
[2026-02-04 02:47:53] -rw------- 1 boinc boinc       357 Feb  4 02:47 output.list
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc       620 Feb  4 02:47 runtime_log
[2026-02-04 02:47:53] -rw------- 1 boinc boinc   1249280 Feb  4 02:47 result.tar.gz
[2026-02-04 02:47:53] -rw------- 1 boinc boinc       644 Feb  4 02:47 x6mKDmOjb78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmwhVKDmkc2Iln.diag
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc      8900 Feb  4 02:47 runtime_log.err
[2026-02-04 02:47:53] -rw-r--r-- 1 boinc boinc     21189 Feb  4 02:47 stderr.txt
[2026-02-04 02:47:53] HITS file was successfully produced:
[2026-02-04 02:47:53] -rw------- 1 boinc boinc 183586818 Feb  4 02:46 shared/HITS.pool.root.1
[2026-02-04 02:47:53]  *** Contents of shared directory: ***
[2026-02-04 02:47:53] total 664816
[2026-02-04 02:47:53] -rw-r--r-- 2 boinc boinc     15845 Feb  4 00:59 start_atlas.sh
[2026-02-04 02:47:53] -rw-r--r-- 2 boinc boinc    597764 Feb  4 00:59 input.tar.gz
[2026-02-04 02:47:53] -rw-r--r-- 2 boinc boinc 495306368 Feb  4 00:59 ATLAS.root_0
[2026-02-04 02:47:53] -rw------- 1 boinc boinc 183586818 Feb  4 02:46 HITS.pool.root.1
[2026-02-04 02:47:53] -rw------- 1 boinc boinc   1249280 Feb  4 02:47 result.tar.gz
02:47:54 (350294): run_atlas exited; CPU time 18894.973591
02:47:54 (350294): called boinc_finish(0)

</stderr_txt>
]]>

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