Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:07:21 (674222): wrapper (7.7.26015): starting
19:07:21 (674222): wrapper: running run_atlas (--nthreads 12)
[2026-02-03 19:07:21] Arguments: --nthreads 12
[2026-02-03 19:07:21] Threads: 12
[2026-02-03 19:07:21] Checking for CVMFS
[2026-02-03 19:07:22] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-03 19:07:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-03 19:07:23] Running cvmfs_config stat atlas.cern.ch
[2026-02-03 19:07:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-03 19:07:23] 2.11.5.0 1774115 93456 242556 155851 2 522 45006405 45568001 10931 130560 0 771077846 99.813 434656117 17835 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2026-02-03 19:07:23] CVMFS is ok
[2026-02-03 19:07:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-03 19:07:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-03 19:07:23] Further information can be found at the LHC@home message board.
[2026-02-03 19:07:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-03 19:07:23] Checking for apptainer binary...
[2026-02-03 19:07:23] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-03 19:07:23] Running /usr/bin/apptainer --version
[2026-02-03 19:07:23] apptainer version 1.4.1-1.el9
[2026-02-03 19:07:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-03 19:07:24] wns0089.triumf.lcg
[2026-02-03 19:07:24] apptainer works
[2026-02-03 19:07:24] Set ATHENA_PROC_NUMBER=12
[2026-02-03 19:07:24] Set ATHENA_CORE_NUMBER=12
[2026-02-03 19:07:24] Starting ATLAS job with PandaID=6994615979
[2026-02-03 19:07:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-03 19:11:49]  *** The last 200 lines of the pilot log: ***
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | INFO     | will not add max space = 0 B to job metrics
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | WARNING  | wrong length of table data, x=[1770174499.0], y=[958.0] (must be same and length>=4)
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | could have reported an average CPU frequency of 2732 MHz (4 samples)
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | ..............................
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . Timing measurements:
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . get job = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . initial setup = 8 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . payload setup = 12 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . stage-in = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . payload execution = 32 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . stage-out = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . log creation = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | ..............................
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994615979/pilotlog.txt
[2026-02-03 19:11:49] 2026-02-04 03:10:43,610 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-02-03 19:11:49] - Log from pilotlog.txt -
[2026-02-03 19:11:49] 2026-02-04 03:10:43,388 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 19:11:49] 2026-02-04 03:10:43,388 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | WARNING  | found no stored workdir sizes
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | INFO     | will not add max space = 0 B to job metrics
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | WARNING  | wrong length of table data, x=[1770174499.0], y=[958.0] (must be same and length>=4)
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | could have reported an average CPU frequency of 2732 MHz (4 samples)
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | ..............................
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . Timing measurements:
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . get job = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . initial setup = 8 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . payload setup = 12 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . stage-in = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . payload execution = 32 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . stage-out = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . log creation = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | ..............................
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994615979/pilotlog.txt
[2026-02-03 19:11:49] 2026-02-04 03:10:43,611 | WARNING  | 
[2026-02-03 19:11:49] [begin log extracts]
[2026-02-03 19:11:49] - Log from pilotlog.txt -
[2026-02-03 19:11:49] 2026-02-04 03:10:43,388 | INFO     | extracted standard memory fields from prmon json
[2026-02-03 19:11:49] 2026-02-04 03:10:43,388 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | WARNING  | found no stored workdir sizes
[2026-02-03 19:11:49] 2026-02-04 03:10:43,389 | INFO     | will not add max space = 0 B to job metrics
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | WARNING  | wrong length of table data, x=[1770174499.0], y=[958.0] (must be same and length>=4)
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | could have reported an average CPU frequency of 2732 MHz (4 samples)
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | ..............................
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . Timing measurements:
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . get job = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . initial setup = 8 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . payload setup = 12 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . stage-in = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . payload execution = 32 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . stage-out = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,390 | INFO     | . log creation = 0 s
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | ..............................
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-02-03 19:11:49] 2026-02-04 03:10:43,391 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6994615979/pilotlog.txt
[2026-02-03 19:11:49] [end log extracts]
[2026-02-03 19:11:49] 2026-02-04 03:10:43,611 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-02-03 19:11:49] 2026-02-04 03:10:43,611 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-02-03 19:11:49] 2026-02-04 03:10:44,064 | INFO     | 
[2026-02-03 19:11:49] 2026-02-04 03:10:44,064 | INFO     | job summary report
[2026-02-03 19:11:49] 2026-02-04 03:10:44,064 | INFO     | --------------------------------------------------
[2026-02-03 19:11:49] 2026-02-04 03:10:44,064 | INFO     | PanDA job id: 6994615979
[2026-02-03 19:11:49] 2026-02-04 03:10:44,064 | INFO     | task id: 48318026
[2026-02-03 19:11:49] 2026-02-04 03:10:44,064 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-02-03 19:08:36,388 CRITICAL Transform executor raised TransformValidationExceptio
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | status: LOG_TRANSFER = DONE 
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | pilot state: failed 
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | transexitcode: 65
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | exeerrorcode: 65
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | exitcode: 65
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | cpuconsumptiontime: 13 s
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | nevents: 0
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | neventsw: 0
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | pid: 682538
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | pgrp: 682538
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | corecount: 12
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | event service: False
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | sizes: {0: 2277127, 1: 2278242, 12: 2278242, 48: 2301487, 49: 2305779, 50: 2305807, 168: 2306101}
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | --------------------------------------------------
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | 
[2026-02-03 19:11:49] 2026-02-04 03:10:44,065 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue jobs had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue payloads had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue data_in had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue data_out had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,258 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | queue completed_jobids has 1 job(s)
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | queue messages had 0 job(s) [purged]
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | job 6994615979 has completed (purged errors)
[2026-02-03 19:11:49] 2026-02-04 03:10:44,259 | INFO     | overall cleanup function is called
[2026-02-03 19:11:49] 2026-02-04 03:10:44,901 | INFO     | PID=678038 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 19:11:49] 2026-02-04 03:10:44,902 | INFO     | .. there are 14 such processes running
[2026-02-03 19:11:49] 2026-02-04 03:10:45,266 | INFO     | --- collectZombieJob: --- 10, [682538]
[2026-02-03 19:11:49] 2026-02-04 03:10:45,266 | INFO     | zombie collector waiting for pid 682538
[2026-02-03 19:11:49] 2026-02-04 03:10:45,266 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-02-03 19:11:49] 2026-02-04 03:10:45,266 | INFO     | collected zombie processes
[2026-02-03 19:11:49] 2026-02-04 03:10:45,266 | INFO     | will attempt to kill all subprocesses of pid=682538
[2026-02-03 19:11:49] 2026-02-04 03:10:45,520 | INFO     | process IDs to be killed: [682538] (in reverse order)
[2026-02-03 19:11:49] 2026-02-04 03:10:45,826 | WARNING  | found no corresponding commands to process id(s)
[2026-02-03 19:11:49] 2026-02-04 03:10:45,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-02-03 19:11:49] 2026-02-04 03:10:45,833 | INFO     | did not find any defunct processes belonging to 682538
[2026-02-03 19:11:49] 2026-02-04 03:10:45,838 | INFO     | did not find any defunct processes belonging to 682538
[2026-02-03 19:11:49] 2026-02-04 03:10:45,838 | INFO     | ready for new job
[2026-02-03 19:11:49] 2026-02-04 03:10:45,838 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-02-03 19:11:49] 2026-02-04 03:10:45,840 | INFO     | **************************************
[2026-02-03 19:11:49] 2026-02-04 03:10:45,840 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-02-03 19:11:49] 2026-02-04 03:10:45,840 | INFO     | **************************************
[2026-02-03 19:11:49] 2026-02-04 03:10:45,840 | INFO     | 
[2026-02-03 19:11:49] 2026-02-04 03:10:45,842 | INFO     | architecture information:
[2026-02-03 19:11:49] 2026-02-04 03:10:45,842 | INFO     | executing command: cat /etc/os-release
[2026-02-03 19:11:49] 2026-02-04 03:10:45,855 | INFO     | cat /etc/os-release:
[2026-02-03 19:11:49] NAME="CentOS Linux"
[2026-02-03 19:11:49] VERSION="7 (Core)"
[2026-02-03 19:11:49] ID="centos"
[2026-02-03 19:11:49] ID_LIKE="rhel fedora"
[2026-02-03 19:11:49] VERSION_ID="7"
[2026-02-03 19:11:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-02-03 19:11:49] ANSI_COLOR="0;31"
[2026-02-03 19:11:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-02-03 19:11:49] HOME_URL="https://www.centos.org/"
[2026-02-03 19:11:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-02-03 19:11:49] 
[2026-02-03 19:11:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-02-03 19:11:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-02-03 19:11:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-02-03 19:11:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-02-03 19:11:49] 
[2026-02-03 19:11:49] 2026-02-04 03:10:45,855 | INFO     | **************************************
[2026-02-03 19:11:49] 2026-02-04 03:10:46,359 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-02-03 19:11:49] 2026-02-04 03:10:46,524 | INFO     | sufficient remaining disk space (1936827875328 B)
[2026-02-03 19:11:49] 2026-02-04 03:10:46,524 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-02-03 19:11:49] 2026-02-04 03:10:46,524 | INFO     | current server update state: UPDATING_FINAL
[2026-02-03 19:11:49] 2026-02-04 03:10:46,524 | INFO     | update_server=False
[2026-02-03 19:11:49] 2026-02-04 03:10:46,524 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-02-03 19:11:49] 2026-02-04 03:10:46,532 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-02-03 19:11:49] 2026-02-04 03:10:46,532 | INFO     | aborting loop
[2026-02-03 19:11:49] 2026-02-04 03:10:46,532 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-02-03 19:11:49] 2026-02-04 03:10:46,740 | INFO     | all payload control threads have been joined
[2026-02-03 19:11:49] 2026-02-04 03:10:46,927 | INFO     | all data control threads have been joined
[2026-02-03 19:11:49] 2026-02-04 03:10:47,033 | INFO     | all job control threads have been joined
[2026-02-03 19:11:49] 2026-02-04 03:10:47,530 | INFO     | [job] retrieve thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:47,538 | INFO     | [job] job monitor thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:47,568 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:47,746 | INFO     | [payload] control thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:47,835 | INFO     | [job] validate thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:47,857 | INFO     | [payload] validate_post thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:47,933 | INFO     | [data] control thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:48,039 | INFO     | [job] control thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:48,107 | INFO     | [job] create_data_payload thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:48,108 | INFO     | [payload] validate_pre thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:48,254 | INFO     | [data] copytool_in thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:48,539 | INFO     | [data] copytool_out thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:48,647 | INFO     | [payload] execute_payloads thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:48,876 | INFO     | [payload] failed_post thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:49,065 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-03 19:11:49] 2026-02-04 03:10:49,071 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-02-03 19:11:49] 2026-02-04 03:10:50,077 | INFO     | [job] queue monitor thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:10:53,074 | INFO     | [data] queue_monitor thread has finished
[2026-02-03 19:11:49] 2026-02-04 03:11:17,156 | INFO     | PID=678038 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-02-03 19:11:49] 2026-02-04 03:11:17,156 | INFO     | .. there are 14 such processes running
[2026-02-03 19:11:49] 2026-02-04 03:11:17,157 | INFO     | found 0 job(s) in 20 queues
[2026-02-03 19:11:49] 2026-02-04 03:11:17,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-03 19:11:49] 2026-02-04 03:11:17,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-03 19:11:49] 2026-02-04 03:11:44,040 | INFO     | [monitor] cgroup control has ended
[2026-02-03 19:11:49] 2026-02-04 03:11:44,514 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460511160128)>', '<ExcThread(monitor, started 140459959629568)>']
[2026-02-03 19:11:49] 2026-02-04 03:11:45,305 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-03 19:11:49] 2026-02-04 03:11:45,305 | INFO     | [monitor] control thread has ended
[2026-02-03 19:11:49] 2026-02-04 03:11:49,540 | INFO     | all workflow threads have been joined
[2026-02-03 19:11:49] 2026-02-04 03:11:49,540 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-03 19:11:49] 2026-02-04 03:11:49,541 | INFO     | traces error code: 0
[2026-02-03 19:11:49] 2026-02-04 03:11:49,541 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-03 19:11:49] 2026-02-04 03:11:49,674 [wrapper] ==== pilot stdout END ====
[2026-02-03 19:11:49] 2026-02-04 03:11:49,676 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-03 19:11:49] 2026-02-04 03:11:49,678 [wrapper] pilotpid: 678038
[2026-02-03 19:11:49] 2026-02-04 03:11:49,680 [wrapper] Pilot exit status: 0
[2026-02-03 19:11:49] 2026-02-04 03:11:49,689 [wrapper] pandaids: 6994615979
[2026-02-03 19:11:49] 2026-02-04 03:11:49,727 [wrapper] cleanup supervisor_pilot  678044 678039
[2026-02-03 19:11:49] 2026-02-04 03:11:49,729 [wrapper] Test setup, not cleaning
[2026-02-03 19:11:49] 2026-02-04 03:11:49,732 [wrapper] apfmon messages muted
[2026-02-03 19:11:49] 2026-02-04 03:11:49,734 [wrapper] ==== wrapper stdout END ====
[2026-02-03 19:11:49] 2026-02-04 03:11:49,736 [wrapper] ==== wrapper stderr END ====
[2026-02-03 19:11:49]  *** Error codes and diagnostics ***
[2026-02-03 19:11:49]     "exeErrorCode": 65,
[2026-02-03 19:11:49]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 19:11:49]     "pilotErrorCode": 1305,
[2026-02-03 19:11:49]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-02-03 19:11:49]  *** Listing of results directory ***
[2026-02-03 19:11:49] total 524964
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc    584422 Feb  3 15:41 pilot3.tar.gz
[2026-02-03 19:11:49] -rwx------. 1 boinc boinc     36322 Feb  3 15:43 runpilot2-wrapper.sh
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc      5111 Feb  3 15:44 queuedata.json
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc       100 Feb  3 19:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-03 19:11:49] -rwxr-xr-x. 1 boinc boinc      7986 Feb  3 19:07 run_atlas
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc       105 Feb  3 19:07 job.xml
[2026-02-03 19:11:49] -rw-r--r--. 2 boinc boinc 533414871 Feb  3 19:07 EVNT.48318024._000032.pool.root.1
[2026-02-03 19:11:49] -rw-r--r--. 2 boinc boinc     15845 Feb  3 19:07 start_atlas.sh
[2026-02-03 19:11:49] drwxrwx--x. 2 boinc boinc      4096 Feb  3 19:07 shared
[2026-02-03 19:11:49] -rw-r--r--. 2 boinc boinc    597775 Feb  3 19:07 input.tar.gz
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc      6594 Feb  3 19:07 init_data.xml
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc         0 Feb  3 19:07 boinc_lockfile
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc      2526 Feb  3 19:07 pandaJob.out
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc   1009244 Feb  3 19:07 agis_schedconf.cvmfs.json
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc   1511668 Feb  3 19:07 agis_ddmendpoints.agis.ALL.json
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc       445 Feb  3 19:07 workernode_map.json
[2026-02-03 19:11:49] drwx------. 5 boinc boinc      4096 Feb  3 19:07 pilot3
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc       522 Feb  3 19:08 boinc_task_state.xml
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc       977 Feb  3 19:08 memory_monitor_summary.json
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc     21180 Feb  3 19:08 log.48318026._002709.job.log.tgz.1
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc        95 Feb  3 19:10 pilot_heartbeat.json
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc      7026 Feb  3 19:10 heartbeat.json
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc      8192 Feb  3 19:11 boinc_mmap_file
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc        22 Feb  3 19:11 wrapper_checkpoint.txt
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc      4818 Feb  3 19:11 pilotlog.txt
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc     82167 Feb  3 19:11 log.48318026._002709.job.log.1
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc       188 Feb  3 19:11 output.list
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc       620 Feb  3 19:11 runtime_log
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc    122880 Feb  3 19:11 result.tar.gz
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc      8635 Feb  3 19:11 runtime_log.err
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc       644 Feb  3 19:11 NzwLDm7Df78n9Rq4apOajLDm4fhM0noT9bVooX4SDmomVKDm01eHon.diag
[2026-02-03 19:11:49] -rw-r--r--. 1 boinc boinc     21752 Feb  3 19:11 stderr.txt
[2026-02-03 19:11:49] No HITS result produced
[2026-02-03 19:11:49]  *** Contents of shared directory: ***
[2026-02-03 19:11:49] total 521640
[2026-02-03 19:11:49] -rw-r--r--. 2 boinc boinc 533414871 Feb  3 19:07 ATLAS.root_0
[2026-02-03 19:11:49] -rw-r--r--. 2 boinc boinc     15845 Feb  3 19:07 start_atlas.sh
[2026-02-03 19:11:49] -rw-r--r--. 2 boinc boinc    597775 Feb  3 19:07 input.tar.gz
[2026-02-03 19:11:49] -rw-------. 1 boinc boinc    122880 Feb  3 19:11 result.tar.gz
19:11:50 (674222): run_atlas exited; CPU time 17.485137
19:11:50 (674222): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN