Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
11:10:15 (2557552): wrapper (7.7.26015): starting
11:10:15 (2557552): wrapper: running run_atlas (--nthreads 2)
[2026-02-04 11:10:15] Arguments: --nthreads 2
[2026-02-04 11:10:15] Threads: 2
[2026-02-04 11:10:15] Checking for CVMFS
[2026-02-04 11:10:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-02-04 11:10:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-02-04 11:10:16] Running cvmfs_config stat atlas.cern.ch
[2026-02-04 11:10:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-02-04 11:10:16] 2.9.2.0 1581152 9748 62632 155862 0 50 22459861 36864001 0 130560 0 2896539 99.979 332348 7781 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-02-04 11:10:16] CVMFS is ok
[2026-02-04 11:10:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-02-04 11:10:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-02-04 11:10:16] Further information can be found at the LHC@home message board.
[2026-02-04 11:10:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-02-04 11:10:16] Checking for apptainer binary...
[2026-02-04 11:10:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-02-04 11:10:16] Running /usr/bin/apptainer --version
[2026-02-04 11:10:16] apptainer version 1.4.1-1.1
[2026-02-04 11:10:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-02-04 11:10:16] thA314b
[2026-02-04 11:10:16] apptainer works
[2026-02-04 11:10:16] Set ATHENA_PROC_NUMBER=2
[2026-02-04 11:10:16] Set ATHENA_CORE_NUMBER=2
[2026-02-04 11:10:16] Starting ATLAS job with PandaID=7000017007
[2026-02-04 11:10:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-02-04 13:26:58]  *** The last 200 lines of the pilot log: ***
[2026-02-04 13:26:58] 2026-02-04 12:26:30,130 | INFO     | all data control threads have been joined
[2026-02-04 13:26:58] 2026-02-04 12:26:30,198 | INFO     | [job] retrieve thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:30,199 | INFO     | [job] queue monitor thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:30,439 | INFO     | [payload] control thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:30,540 | INFO     | [job] validate thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:30,634 | INFO     | all job control threads have been joined
[2026-02-04 13:26:58] 2026-02-04 12:26:30,815 | INFO     | [data] copytool_in thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:30,867 | INFO     | [payload] failed_post thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:30,886 | INFO     | [job] create_data_payload thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:30,897 | INFO     | [payload] validate_pre thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:31,060 | INFO     | [payload] execute_payloads thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:31,128 | INFO     | [job] job monitor thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:31,132 | INFO     | [data] control thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:31,199 | INFO     | [data] copytool_out thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:31,233 | INFO     | [payload] run_realtimelog thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:31,600 | INFO     | [payload] validate_post thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:31,640 | INFO     | [job] control thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:32,302 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-02-04 13:26:58] 2026-02-04 12:26:36,308 | INFO     | [data] queue_monitor thread has finished
[2026-02-04 13:26:58] 2026-02-04 12:26:49,716 | INFO     | [monitor] cgroup control has ended
[2026-02-04 13:26:58] 2026-02-04 12:26:50,258 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140319526082368)>', '<ExcThread(monitor, started 140319039407872)>']
[2026-02-04 13:26:58] 2026-02-04 12:26:55,283 | INFO     | all workflow threads have been joined
[2026-02-04 13:26:58] 2026-02-04 12:26:55,284 | INFO     | end of generic workflow (traces error code: 0)
[2026-02-04 13:26:58] 2026-02-04 12:26:55,284 | INFO     | traces error code: 0
[2026-02-04 13:26:58] 2026-02-04 12:26:55,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-02-04 13:26:58] 2026-02-04 12:26:58,830 | INFO     | PID=2561578 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-02-04 13:26:58] 2026-02-04 12:26:58,830 | INFO     | found 0 job(s) in 20 queues
[2026-02-04 13:26:58] 2026-02-04 12:26:58,830 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-02-04 13:26:58] 2026-02-04 12:26:58,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-02-04 13:26:58] 2026-02-04 12:26:58,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-02-04 13:26:58] 2026-02-04 12:26:58,830 | CRITICAL | thread 'MainThread' is not alive
[2026-02-04 13:26:58] 2026-02-04 12:26:58,830 | INFO     | [monitor] control thread has ended
[2026-02-04 13:26:58] 2026-02-04 12:26:58,869 [wrapper] ==== pilot stdout END ====
[2026-02-04 13:26:58] 2026-02-04 12:26:58,871 [wrapper] ==== wrapper stdout RESUME ====
[2026-02-04 13:26:58] 2026-02-04 12:26:58,874 [wrapper] pilotpid: 2561578
[2026-02-04 13:26:58] 2026-02-04 12:26:58,876 [wrapper] Pilot exit status: 0
[2026-02-04 13:26:58] 2026-02-04 12:26:58,881 [wrapper] pandaids: 7000017007
[2026-02-04 13:26:58] 2026-02-04 12:26:58,893 [wrapper] cleanup supervisor_pilot 2571155 2561579
[2026-02-04 13:26:58] 2026-02-04 12:26:58,895 [wrapper] Test setup, not cleaning
[2026-02-04 13:26:58] 2026-02-04 12:26:58,897 [wrapper] apfmon messages muted
[2026-02-04 13:26:58] 2026-02-04 12:26:58,899 [wrapper] ==== wrapper stdout END ====
[2026-02-04 13:26:58] 2026-02-04 12:26:58,901 [wrapper] ==== wrapper stderr END ====
[2026-02-04 13:26:58]  *** Error codes and diagnostics ***
[2026-02-04 13:26:58]     "exeErrorCode": 0,
[2026-02-04 13:26:58]     "exeErrorDiag": "",
[2026-02-04 13:26:58]     "pilotErrorCode": 0,
[2026-02-04 13:26:58]     "pilotErrorDiag": "",
[2026-02-04 13:26:58]  *** Listing of results directory ***
[2026-02-04 13:26:58] total 679916
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc      5111 Feb  3 18:16 queuedata.json
[2026-02-04 13:26:58] -rwx------ 1 boinc boinc     36322 Feb  3 18:16 runpilot2-wrapper.sh
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc    584422 Feb  3 18:17 pilot3.tar.gz
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc       100 Feb  4 11:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-02-04 13:26:58] -rwxr-xr-x 1 boinc boinc      7986 Feb  4 11:10 run_atlas
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc       105 Feb  4 11:10 job.xml
[2026-02-04 13:26:58] -rw-r--r-- 2 boinc boinc 501530670 Feb  4 11:10 EVNT.48317889._000239.pool.root.1
[2026-02-04 13:26:58] -rw-r--r-- 2 boinc boinc    597753 Feb  4 11:10 input.tar.gz
[2026-02-04 13:26:58] -rw-r--r-- 2 boinc boinc     15845 Feb  4 11:10 start_atlas.sh
[2026-02-04 13:26:58] drwxrwx--x 2 boinc boinc      4096 Feb  4 11:10 shared
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc         0 Feb  4 11:10 boinc_setup_complete
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc      6207 Feb  4 11:10 init_data.xml
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc         0 Feb  4 11:10 boinc_lockfile
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc      2522 Feb  4 11:10 pandaJob.out
[2026-02-04 13:26:58] -rw------- 1 boinc boinc   1009236 Feb  4 11:10 agis_schedconf.cvmfs.json
[2026-02-04 13:26:58] -rw------- 1 boinc boinc   1511668 Feb  4 11:10 agis_ddmendpoints.agis.ALL.json
[2026-02-04 13:26:58] -rw------- 1 boinc boinc       426 Feb  4 11:10 workernode_map.json
[2026-02-04 13:26:58] drwx------ 5 boinc boinc      4096 Feb  4 11:10 pilot3
[2026-02-04 13:26:58] -rw------- 1 boinc boinc 187849045 Feb  4 13:26 HITS.48317892._012545.pool.root.1
[2026-02-04 13:26:58] -rw------- 1 boinc boinc        95 Feb  4 13:26 pilot_heartbeat.json
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc       530 Feb  4 13:26 boinc_task_state.xml
[2026-02-04 13:26:58] -rw------- 1 boinc boinc      1023 Feb  4 13:26 memory_monitor_summary.json
[2026-02-04 13:26:58] -rw------- 1 boinc boinc    295596 Feb  4 13:26 log.48317892._012545.job.log.tgz.1
[2026-02-04 13:26:58] -rw------- 1 boinc boinc      6292 Feb  4 13:26 heartbeat.json
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc      8192 Feb  4 13:26 boinc_mmap_file
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc        27 Feb  4 13:26 wrapper_checkpoint.txt
[2026-02-04 13:26:58] -rw------- 1 boinc boinc       817 Feb  4 13:26 pilotlog.txt
[2026-02-04 13:26:58] -rw------- 1 boinc boinc   1167092 Feb  4 13:26 log.48317892._012545.job.log.1
[2026-02-04 13:26:58] -rw------- 1 boinc boinc       357 Feb  4 13:26 output.list
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc       620 Feb  4 13:26 runtime_log
[2026-02-04 13:26:58] -rw------- 1 boinc boinc   1484800 Feb  4 13:26 result.tar.gz
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc      8901 Feb  4 13:26 runtime_log.err
[2026-02-04 13:26:58] -rw------- 1 boinc boinc       658 Feb  4 13:26 DuOLDm5BZ78nsSi4ap6QjLDmwznN0nGgGQJmIVkRDmWYVKDmikjynm.diag
[2026-02-04 13:26:58] -rw-r--r-- 1 boinc boinc      6726 Feb  4 13:26 stderr.txt
[2026-02-04 13:26:58] HITS file was successfully produced:
[2026-02-04 13:26:59] -rw------- 1 boinc boinc 187849045 Feb  4 13:26 shared/HITS.pool.root.1
[2026-02-04 13:26:59]  *** Contents of shared directory: ***
[2026-02-04 13:26:59] total 675288
[2026-02-04 13:26:59] -rw-r--r-- 2 boinc boinc 501530670 Feb  4 11:10 ATLAS.root_0
[2026-02-04 13:26:59] -rw-r--r-- 2 boinc boinc    597753 Feb  4 11:10 input.tar.gz
[2026-02-04 13:26:59] -rw-r--r-- 2 boinc boinc     15845 Feb  4 11:10 start_atlas.sh
[2026-02-04 13:26:59] -rw------- 1 boinc boinc 187849045 Feb  4 13:26 HITS.pool.root.1
[2026-02-04 13:26:59] -rw------- 1 boinc boinc   1484800 Feb  4 13:26 result.tar.gz
13:27:00 (2557552): run_atlas exited; CPU time 15887.846916
13:27:00 (2557552): called boinc_finish(0)

</stderr_txt>
]]>

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